RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRLR (Homo sapiens)

Ensembl gene IDs: ENSG00000113494

Ensembl transcript IDs: ENST00000231423.7, ENST00000310101.9, ENST00000348262.7, ENST00000397391.7, ENST00000503330.5, ENST00000504500.5, ENST00000508107.5, ENST00000509140.5, ENST00000509839.5, ENST00000509934.1, ENST00000513753.5, ENST00000514088.5, ENST00000514206.5, ENST00000515839.1, ENST00000542609.5, ENST00000618457.5, ENST00000618625.4, ENST00000619676.4, ENST00000620785.4

Found 1553 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGCATCTCCCTGGGGTGCACAGTCTGT +
Preference number: 1 (lower is better)
Translates to: HMSWLVTCCRSNPSQ*GQWTHSISLGCTVC
Trigger: ACAGACTGTGCACCCCAGGGAGATGCTGTGTGTCCACTGGCCTCACTGACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 90 bp GGAGTAATCCAAGTCAGTGAGGCCAGTGGACACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTGTGGTTGGACAGAGGGGAGAAAATG +
Preference number: 1 (lower is better)
Translates to: GVIQVSEASGHTASP*GAQSVLWLDRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTGTCCACTGGCCTCACTGACTTGGATTACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR TCA 90 bp GGGGGTCCCAGGTGTGGGTTGTTTCAGGATTCTCTGGCTTCTCAATaGCCTCAGGATCATAGAATGTGGAGGGATTGGCCTGGGGTTCCT +
Preference number: 1 (lower is better)
Translates to: GGPRCGLFQDSLASQ*PQDHRMWRDWPGVP
Trigger: AGGAACCCCAGGCCAATCCCTCCACATTCTATGATCCTGAGGTCATTGAGAAGCCAGAGAATCCTGAAACAACCCACACCTGGGACCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR TCA 90 bp GGGATCCAGGTAATCCAAACCACCCAGCTGGAGCCTGCACTTGCTTaGTGTTGCAGTGAAGTTGGCCAGGGCTTTCTCAGCTTGATTCTG +
Preference number: 1 (lower is better)
Translates to: GIQVIQTTQLEPALA*CCSEVGQGFLSLIL
Trigger: CAGAATCAAGCTGAGAAAGCCCTGGCCAACTTCACTGCAACATCAAGCAAGTGCAGGCTCCAGCTGGGTGGTTTGGATTACCTGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR GCA 90 bp CAAGGGGTCACCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAG +
Preference number: 1 (lower is better)
Translates to: QGVTTRYLNEGRWTP*TPVSMVWFAANLDK
Trigger: CTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGGTGACCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397391.7
3UTR CCA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTG +
Preference number: 1 (lower is better)
Translates to: GCEEYISSRFPTASE*GTTCFTWQCLRGTV
Trigger: CACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 90 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGG +
Preference number: 1 (lower is better)
Translates to: SRFPTASEWGTTCFT*QCLRGTVTKLIATR
Trigger: CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 90 bp ACCCAACATCAAGGGGTCACCACTAGGTATCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAAC +
Preference number: 1 (lower is better)
Translates to: TQHQGVTTRYLNEGR*TPCTPVSMVWFAAN
Trigger: GTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGGTGACCCCTTGATGTTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397391.7
3UTR CCA 90 bp GCTTATGCACTGGGGGTCCCAGGTGTGGGTTGTTTCAGGATTCTCTaGCTTCTCAATGACCTCAGGATCATAGAATGTGGAGGGATTGGC +
Preference number: 1 (lower is better)
Translates to: AYALGVPGVGCFRIL*LLNDLRIIECGGIG
Trigger: GCCAATCCCTCCACATTCTATGATCCTGAGGTCATTGAGAAGCCAGAGAATCCTGAAACAACCCACACCTGGGACCCCCAGTGCATAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR GCA 90 bp CATGGTGAAGTCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAG +
Preference number: 1 (lower is better)
Translates to: HGEVTRYLNEGRWTP*TPVSMVWFAANLDK
Trigger: CTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGACTTCACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
3UTR CCA 90 bp TGTCACAGCTCCCCCGGCCTGAGTCAGTGTCAGGATCCAGGTATGTaGGTTTCATACCTTGACTTGGGTGTTCTTTTGAATGGACTGACA +
Preference number: 1 (lower is better)
Translates to: CHSSPGLSQCQDPGM*VSYLDLGVLLNGLT
Trigger: TGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGGATCCTGACACTGACTCAGGCCGGGGGAGCTGTGACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 90 bp TTTGAGAGGATTTTAAAGCATCTTTACCTGCTTCATTCAACAGAGTaGCCGGTGCACCTGCAGGGCCCACAGCCAGCTCACACACATCAG +
Preference number: 1 (lower is better)
Translates to: FERILKHLYLLHSTE*PVHLQGPQPAHTHQ
Trigger: CTGATGTGTGTGAGCTGGCTGTGGGCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAGCAGGTAAAGATGCTTTAAAATCCTCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR GCA 90 bp TACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATT +
Preference number: 1 (lower is better)
Translates to: YISSRFPTASEWGTT*FTWQCLRGTVTKLI
Trigger: AATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR GCA 90 bp CTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTaGTTCAGGCCAAGGGTGTGTCAGCAAGGCTTTCTTGCACTGCAC +
Preference number: 1 (lower is better)
Translates to: LCFSLKRCHTISCAH*FRPRVCQQGFLALH
Trigger: GTGCAGTGCAAGAAAGCCTTGCTGACACACCCTTGGCCTGAAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 90 bp AAGTTGCTAAAGGCAGGGCCAAGTCTTTCTGCAAATGATGGGCAGTaGTGGACACTTGAGGAAAGAGAAAGCCAGAGTTTCCCCAGAGCT +
Preference number: 1 (lower is better)
Translates to: KLLKAGPSLSANDGQ*WTLEERESQSFPRA
Trigger: AGCTCTGGGGAAACTCTGGCTTTCTCTTTCCTCAAGTGTCCACCACTGCCCATCATTTGCAGAAAGACTTGGCCCTGCCTTTAGCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 90 bp CGGCCTGAGTCAGTGTCAGGATCCAGGTATGTGGGTTTCATACCTTaGCTTGGGTGTTCTTTTGAATGGACTGACATTAGATGCTGGTCC +
Preference number: 1 (lower is better)
Translates to: RPESVSGSRYVGFIP*LGCSFEWTDIRCWS
Trigger: GGACCAGCATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGGATCCTGACACTGACTCAGGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR GCA 90 bp TGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTGGGCTTaGCGCTGTTCTCTCTCTGTTTTGGTAGCAATGATAATGCACCAT +
Preference number: 1 (lower is better)
Translates to: WHTPYCSQESRASWA*RCSLSVLVAMIMHH
Trigger: ATGGTGCATTATCATTGCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 90 bp GGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCTTAAAC +
Preference number: 1 (lower is better)
Translates to: GLHALQYPWSGLQRT*TRYFCPGCRLRILN
Trigger: GTTTAAGATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR CCA 90 bp ACACCTTGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTaGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTAGCAATGATAATG +
Preference number: 1 (lower is better)
Translates to: TPWHTPYCSQESRAS*ACRCSLSVLVAMIM
Trigger: CATTATCATTGCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGCCAAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 90 bp TGTATCATTCATGGTGAAGTCACTAGGTATCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAAC +
Preference number: 1 (lower is better)
Translates to: CIIHGEVTRYLNEGR*TPCTPVSMVWFAAN
Trigger: GTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGACTTCACCATGAATGATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
3UTR CCA 90 bp AGACTTGCCCTTCTCCAACAGATGAGCATCAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAAGATGCAGGTCACCATGCTATAGCC +
Preference number: 1 (lower is better)
Translates to: RLALLQQMSIKSFYF*PRNWRKDAGHHAIA
Trigger: GGCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTGATGCTCATCTGTTGGAGAAGGGCAAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR TCA 90 bp GAGGATCCAAGCTTTGACTTCTTTCAGGAAGCCTGGCACTGGAATTaGCCGGGAGATTCTCATTACCTTACTCTGACCTTTGGAGCTATT +
Preference number: 1 (lower is better)
Translates to: EDPSFDFFQEAWHWN*PGDSHYLTLTFGAI
Trigger: AATAGCTCCAAAGGTCAGAGTAAGGTAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGCTTCCTGAAAGAAGTCAAAGCTTGGATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 90 bp AACAGACTCAGTTTCATCTGCATAGTTTCGAGGGACTTTCAAAGGTaGAGCCAGCAGGAATTACTCTGCATATTCTGGCCAGGAAGGTCC +
Preference number: 1 (lower is better)
Translates to: NRLSFICIVSRDFQR*SQQELLCIFWPGRS
Trigger: GGACCTTCCTGGCCAGAATATGCAGAGTAATTCCTGCTGGCTTCACCTTTGAAAGTCCCTCGAAACTATGCAGATGAAACTGAGTCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 90 bp ATCATTCCATTAGTCAAGCTATCAGTGAAAGGAGTGTGTAAAACATaGGGGATCCAGGTAATCCAAACCACCCAGCTGGAGCCTGCACTT +
Preference number: 1 (lower is better)
Translates to: IIPLVKLSVKGVCKT*GIQVIQTTQLEPAL
Trigger: AAGTGCAGGCTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCACTGATAGCTTGACTAATGGAATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 90 bp CATCTACTTCTAAATACTCCACCAGCAAGTCCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATCCCAAGGCACTCAGTAGTTCTTCAG +
Preference number: 1 (lower is better)
Translates to: HLLLNTPPASPHSQK*EESLGIPRHSVVLQ
Trigger: CTGAAGAACTACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACTTCTGACTATGAGGACTTGCTGGTGGAGTATTTAGAAGTAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 90 bp GGGACCTCTGGTTGCTCAATAACTCATAGGCTTTTCACATTCAGCTaGGTCATCACAAGACACAGAGCAAAACTGCCCAGATCTTGTACA +
Preference number: 1 (lower is better)
Translates to: GTSGCSITHRLFTFS*VITRHRAKLPRSCT
Trigger: TGTACAAGATCTGGGCAGTTTTGCTCTGTGTCTTGTGATGACCCAGCTGAATGTGAAAAGCCTATGAGTTATTGAGCAACCAGAGGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 90 bp GCAATGTGTTCACTTTCAAACAGGAGGGGGACCTCTGAGTCCAGTTaGTATCAATATGGGATAGTTGGGGTGGAATATTTAACTCCCAGA +
Preference number: 1 (lower is better)
Translates to: AMCSLSNRRGTSESS*YQYGIVGVEYLTPR
Trigger: TCTGGGAGTTAAATATTCCACCCCAACTATCCCATATTGATAGCAACTGGACTCAGAGGTCCCCCTCCTGTTTGAAAGTGAACACATTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 90 bp TGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTA +
Preference number: 1 (lower is better)
Translates to: WVDIINLGSPCKGDN*LGHILHKHLHNNLL
Trigger: TAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATATCTACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR TCA 90 bp TATATGCTCTTCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTTGACTTGAGATTTTTCTTGGTCTGT +
Preference number: 1 (lower is better)
Translates to: YMLFSSTGLWSMLPL*TPQVFLDLRFFLVC
Trigger: ACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGCATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR TCA 90 bp ATGTTAAATCAATCTGAGTTGGAGGAACAGATCTCTGTTTTTCTCTaGAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCAGGCCAA +
Preference number: 1 (lower is better)
Translates to: MLNQSELEEQISVFL*SVVTQSHVLTASGQ
Trigger: TTGGCCTGAAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCTGTTCCTCCAACTCAGATTGATTTAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 90 bp GTAAAGCCAGGAAGGAAAAGGAGAAGCAAGGATGTTAAATCAATCTaGGTTGGAGGAACAGATCTCTGTTTTTCTCTGAAGCGTTGTCAC +
Preference number: 1 (lower is better)
Translates to: VKPGRKRRSKDVKSI*VGGTDLCFSLKRCH
Trigger: GTGACAACGCTTCAGAGAAAAACAGAGATCTGTTCCTCCAACTCAGATTGATTTAACATCCTTGCTTCTCCTTTTCCTTCCTGGCTTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 90 bp GGGAGATTCTCATTACCTTACTCTGACCTTTGGAGCTATTCCCATTaGTCTGGGAAGCAAATACCTAGTTTCCCAGAACTTTTATTTGGA +
Preference number: 1 (lower is better)
Translates to: GRFSLPYSDLWSYSH*SGKQIPSFPELLFG
Trigger: TCCAAATAAAAGTTCTGGGAAACTAGGTATTTGCTTCCCAGAGCAATGGGAATAGCTCCAAAGGTCAGAGTAAGGTAATGAGAATCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 90 bp CTATCAATATGGGATAGTTGGGGTGGAATATTTAACTCCCAGAGGTaGGCTCAAGTTCTCTATGTCCAGCTAGTAAATGGACATATAGAA +
Preference number: 1 (lower is better)
Translates to: LSIWDSWGGIFNSQR*AQVLYVQLVNGHIE
Trigger: TTCTATATGTCCATTTACTAGCTGGACATAGAGAACTTGAGCTCACCTCTGGGAGTTAAATATTCCACCCCAACTATCCCATATTGATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 90 bp GTCCCATGCCAAATCATGAAAGCCTTTTCCAGAGGATATACCTATTaGCATTGTCCCTCAAGAATACTAAGCAGTGTGCTTTTATTTCAT +
Preference number: 1 (lower is better)
Translates to: VPCQIMKAFSRGYTY*HCPSRILSSVLLFH
Trigger: ATGAAATAAAAGCACACTGCTTAGTATTCTTGAGGGACAATGCCAATAGGTATATCCTCTGGAAAAGGCTTTCATGATTTGGCATGGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 90 bp AAATGTATCAATAAGTTTTGGTATGGAGAGTCTCAAATCACAGGGTaGCAGGTTTATCCCCAAATCACAGCCAGCCTCAATTTCTTATCA +
Preference number: 1 (lower is better)
Translates to: KCINKFWYGESQITG*QVYPQITASLNFLS
Trigger: TGATAAGAAATTGAGGCTGGCTGTGATTTGGGGATAAACCTGCCACCCTGTGATTTGAGACTCTCCATACCAAAACTTATTGATACATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 90 bp GATAGAAGGCATTGGTTGGGATTATCTTTGCAGAAAAATATTCAGTaGGTCATGGAATCAAGGAGTCAGTTTCAAAGGACCTTAGAGGTT +
Preference number: 1 (lower is better)
Translates to: DRRHWLGLSLQKNIQ*VMESRSQFQRTLEV
Trigger: AACCTCTAAGGTCCTTTGAAACTGACTCCTTGATTCCATGACTCACTGAATATTTTTCTGCAAAGATAATCCCAACCAATGCCTTCTATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 90 bp CAATTGTTTAAAATGAACGATGAAGCACAAAATCCAGCCTCATTATaGAAAGAACACTTGAGAAGTGTCAGCAGTCACATGAAACAAAGC +
Preference number: 1 (lower is better)
Translates to: QLFKMNDEAQNPASL*KEHLRSVSSHMKQS
Trigger: GCTTTGTTTCATGTGACTGCTGACACTTCTCAAGTGTTCTTTGCATAATGAGGCTGGATTTTGTGCTTCATCGTTCATTTTAAACAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 90 bp TCTGACACAGCTGATATAACTTGTGCTTATACACATCTGTTAGAATaGATTGGAACATCTTGCTGTTCAGGTTGTAAGCTACACAAATCA +
Preference number: 1 (lower is better)
Translates to: SDTADITCAYTHLLE*IGTSCCSGCKLHKS
Trigger: TGATTTGTGTAGCTTACAACCTGAACAGCAAGATGTTCCAATTCATTCTAACAGATGTGTATAAGCACAAGTTATATCAGCTGTGTCAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 90 bp ATTTTGTCATTCACTTCATATTTCACAGTGGGCTTTGGGTTGGTATaGCATTTTACTCCACAAACGGGAACTTTATATACTACTATGTAC +
Preference number: 1 (lower is better)
Translates to: ILSFTSYFTVGFGLV*HFTPQTGTLYTTMY
Trigger: GTACATAGTAGTATATAAAGTTCCCGTTTGTGGAGTAAAATGCCATACCAACCCAAAGCCCACTGTGAAATATGAAGTGAATGACAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 90 bp ACTGAATTTTGTCATTCACTTCATATTTCACAGTGGGCTTTGGGTTaGTATGGCATTTTACTCCACAAACGGGAACTTTATATACTACTA +
Preference number: 1 (lower is better)
Translates to: TEFCHSLHISQWALG*YGILLHKRELYILL
Trigger: TAGTAGTATATAAAGTTCCCGTTTGTGGAGTAAAATGCCATACCAACCCAAAGCCCACTGTGAAATATGAAGTGAATGACAAAATTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 90 bp CCACACACCATTTCACAATTCTGGAACACGGACATGAACAGTAAGTaGAACTTTCTAGGTTTAGATCCATTAAAAGATTATCCATTTACA +
Preference number: 1 (lower is better)
Translates to: PHTISQFWNTDMNSK*NFLGLDPLKDYPFT
Trigger: TGTAAATGGATAATCTTTTAATGGATCTAAACCTAGAAAGTTTCACTTACTGTTCATGTCCGTGTTCCAGAATTGTGAAATGGTGTGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CCTGGGGCAGCAGCCAGGGCGTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTAGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 2 (lower is better)
Translates to: PGAAARAYPGQSQNGSFLGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...TAGAAAGCTTCCATTCTGAGACTGACCAGGATACGCCCTGGCTGCTGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACACACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CAGACAAAAGGGAAGGGCTGTCACAGCTCCCCCGGCCTGAGTCAGTGTCAGGATATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 2 (lower is better)
Translates to: QTKGKGCHSSPGLSQCQDIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...ATCCTGACACTGACTCAGGCCGGGGGAGCTGTGACAGCCCTTCCCTTTTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR GCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 2 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp TCTCAGGAGTCCCGGGCTTCTTGGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTATGTGGTAAGAGGATCTaGGGTTGTGCTGGCTGGGCT +
Preference number: 2 (lower is better)
Translates to: SQESRASWACRCSLSVLVCGKRI*GCAGWA
Trigger: AGCCCAGCCAGCACAACCCCAGATCCTCTTACCACA...TACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CAA 90 bp TCTGGCACCAACACCAGGATGTTGTTATCCATGACCCCGGACACCTaGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: SGTNTRMLLSMTPDT*AYSLLFSGVPGFLG
Trigger: GCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCATGGATAACAACATCCTGGTGTTGGTGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR TCA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 2 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: VNSALGAVGSDHMSWLVTSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...CGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 2 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 2 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: VTKLIATRGSRDWGWVDIAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTACCTCCCTCTGCTGGGTTGCCTGCCTTCCATGCTTATaGACTGGGGGTCCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: VSWSVSEWKLSTSLCWVACLPCL*TGGPRC
Trigger: ACACCTGGGACCCCCAGTGCATAAGCATGGAAGGCA...GGCAACCCAGCAGAGGGAGGTAGAAAGCTTCCATTCTGAGACTGACCAGGATAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp TGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: WSGLQRTWTRYFCPGCRLHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...CAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: LGFPLLQNGGPRALHGSASDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: PTASEWGTTCFTWQCLRGLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...CCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 2 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CAGACAAAAGGGAAGGGCTGTCACAGCTCCCCCGGCCTGAGTCAGTGTCAGGATCCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATC +
Preference number: 2 (lower is better)
Translates to: QTKGKGCHSSPGLSQCQDPHSQK*EESLGI
Trigger: GATGCCAAGACTTTCCTCCCACTTCTGACTATGAGG...ATCCTGACACTGACTCAGGCCGGGGGAGCTGTGACAGCCCTTCCCTTTTGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR TCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 2 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: CEEYISSRFPTASEWGTTSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 2 (lower is better)
Translates to: VNSALGAVGSDHMSWLVTWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...CGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 2 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 2 (lower is better)
Translates to: VNSALGAVGSDHMSWLVTEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...CGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCATGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: VTKLIATRGSRDWGWVDIAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: ILGHPVRETTDLATSFTNHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 2 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 2 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR CAA 90 bp ATGAAGGTCGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTG +
Preference number: 2 (lower is better)
Translates to: MKVAGLHALQYPWSG*QRTWTRYFCPGCRL
Trigger: CAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 2 (lower is better)
Translates to: GCEEYISSRFPTASEWGTSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp GTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 2 (lower is better)
Translates to: VNSALGAVGSDHMSWLVTCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...CGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAGAGGGGCTGCTAGATaGGTCATGGATGCGCCCTTT +
Preference number: 2 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLRGAAR*VMDAPF
Trigger: AAAGGGCGCATCCATGACTCATCTAGCAGCCCCTCT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 2 (lower is better)
Translates to: PGCEEYISSRFPTASEWGWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 2 (lower is better)
Translates to: CEEYISSRFPTASEWGTTSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 2 (lower is better)
Translates to: PGCEEYISSRFPTASEWGEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GGTGAAGTCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATGCACTCCAGTACACCCAGCTGGAGCCTaGACTTGCTTGATGTTGCAG +
Preference number: 2 (lower is better)
Translates to: GEVTRYLNEGRWTPCTPVHPAGA*TCLMLQ
Trigger: CTGCAACATCAAGCAAGTGCAGGCTCCAGCTGGGTG...TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGACTTCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR GCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 2 (lower is better)
Translates to: LGFPLLQNGGPRALHGSADCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CCTTGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTGGGCTTGCCGCGTAGTTCTTCAGACTTaGCCTTCTCCAACAGATGAG +
Preference number: 2 (lower is better)
Translates to: PWHTPYCSQESRASWACRVVLQT*PSPTDE
Trigger: CTCATCTGTTGGAGAAGGGCAAGTCTGAAGAACTAC...GCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CCA 90 bp TGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: WSGLQRTWTRYFCPGCRLAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...CAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp GTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 2 (lower is better)
Translates to: VRETTDLATSFTNTCITTHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...GGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: GCEEYISSRFPTASEWGTSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 2 (lower is better)
Translates to: CEEYISSRFPTASEWGTTRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 2 (lower is better)
Translates to: GCEEYISSRFPTASEWGTTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CAA 90 bp AGGCAGGGCCAAGTCTTTCTGCAAATGATGGGCAGTGGTGGACACTaGAGGAAAGAGAAAGCCAGAGTTTCCCCAGAGCTAAACTGCAAC +
Preference number: 2 (lower is better)
Translates to: RQGQVFLQMMGSGGH*RKEKARVSPELNCN
Trigger: GTTGCAGTTTAGCTCTGGGGAAACTCTGGCTTTCTCTTTCCTCAAGTGTCCACCACTGCCCATCATTTGCAGAAAGACTTGGCCCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 2 (lower is better)
Translates to: IATRGSRDWGWVDIINLGSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 2 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000618625.4
3UTR-3UTR CCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: QLPVNSALGAVGSDHMSWLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...CCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 2 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 2 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: SRFPTASEWGTTCFTWQCGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...GCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR TCA 90 bp GTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 2 (lower is better)
Translates to: VRETTDLATSFTNTCITTSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...GGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 2 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 2 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 2 (lower is better)
Translates to: DWGWVDIINLGSPCKGDNWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...GTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 2 (lower is better)
Translates to: QPGCEEYISSRFPTASEWSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 2 (lower is better)
Translates to: SLILGHPVRETTDLATSFEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 2 (lower is better)
Translates to: PVRETTDLATSFTNTCITEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...TGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: PGCEEYISSRFPTASEWGLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: PGCEEYISSRFPTASEWGGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 2 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 2 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 2 (lower is better)
Translates to: QPGCEEYISSRFPTASEWRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 2 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 2 (lower is better)
Translates to: DWGWVDIINLGSPCKGDNPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...GTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CAA 90 bp CAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTaGTTATCCATGACCCCGGACACCTTGGCATACTCCTTATTGTTC +
Preference number: 2 (lower is better)
Translates to: QATFLACGSGTNTRM*LSMTPDTLAYSLLF
Trigger: GAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCATGGATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR CAA 90 bp TTGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTGGGCTaGCCGCTGTTCTCTCTCTGTTTTGGTAGCAATGATAATGCACCA +
Preference number: 2 (lower is better)
Translates to: LAYSLLFSGVPGFLG*PLFSLCFGSNDNAP
Trigger: TGGTGCATTATCATTGCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CAA 90 bp GACACCTTGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTaGGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTAGCAATGATAAT +
Preference number: 2 (lower is better)
Translates to: DTLAYSLLFSGVPGF*GLPLFSLCFGSNDN
Trigger: ATTATCATTGCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGCCAAGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR TCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 2 (lower is better)
Translates to: ISLILGHPVRETTDLATSSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 2 (lower is better)
Translates to: SLILGHPVRETTDLATSFCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 2 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR TCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 2 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618625.4
3UTR-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCAGGCAGTAAAGGATTaGCCCCTTCAGACCAAGCCA +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHQAVKD*PLQTKP
Trigger: TGGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCTGCACCAGGGACACTaGCCTGAAACCCTGGATTTT +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHLHQGH*PETLDF
Trigger: AAAATCCAGGGTTTCAGGTCAGTGTCCCTGGTGCAG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 2 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: TTDLATSFTNTCITTFYSAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 2 (lower is better)
Translates to: ETTDLATSFTNTCITTFYAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp AGGAGGGTCTGGCTGAACTATGTAAGTCACGTCCACATAAAGTTCATCCGAGAATGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 2 (lower is better)
Translates to: RRVWLNYVSHVHIKFIREWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...TTCTCGGATGAACTTTATGTGGACGTGACTTACATAGTTCAGCCAGACCCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR GCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 2 (lower is better)
Translates to: ISLILGHPVRETTDLATSHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 2 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 2 (lower is better)
Translates to: VTKLIATRGSRDWGWVDISRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 2 (lower is better)
Translates to: ISLILGHPVRETTDLATSRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 2 (lower is better)
Translates to: ISLILGHPVRETTDLATSTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 2 (lower is better)
Translates to: GLQRTWTRYFCPGCRLRILQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...GATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR TCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 2 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 2 (lower is better)
Translates to: PGCEEYISSRFPTASEWGEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp TTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCAAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 2 (lower is better)
Translates to: LATSFTNTCITTFYSKCPSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...TGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 2 (lower is better)
Translates to: TTDLATSFTNTCITTFYSSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCTCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 2 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAACTGCAACTTGGAATaGAGGGACCTCTGGTTGCTC +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHNCNLE*RDLWLL
Trigger: GAGCAACCAGAGGTCCCTGCATTCCAAGTTGCAGTT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: DLATSFTNTCITTFYSKCSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 2 (lower is better)
Translates to: ETTDLATSFTNTCITTFYSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 2 (lower is better)
Translates to: SLILGHPVRETTDLATSFGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGTTTAGCATGTGGATCTaGCACCAACACCAGGATGTT +
Preference number: 2 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEFSMWI*HQHQDV
Trigger: AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAA...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR-3UTR CCA 90 bp CAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 2 (lower is better)
Translates to: QLYWTVVNVAFVNTASLPVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...AGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 2 (lower is better)
Translates to: ISLILGHPVRETTDLATSALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR CAA 90 bp CTGAGTCAGTGTCAGGATCCAGGTATGTGGGTTTCATACCTTGACTaGGGTGTTCTTTTGAATGGACTGACATTAGATGCTGGTCCTCAC +
Preference number: 2 (lower is better)
Translates to: LSQCQDPGMWVSYLD*GVLLNGLTLDAGPH
Trigger: GTGAGGACCAGCATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGGATCCTGACACTGACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CAA 90 bp ATCAATCTGAGTTGGAGGAACAGATCTCTGTTTTTCTCTGAAGCGTaGTCACACAATCTCATGTGCTCACTGCTTCAGGCCAAGGGTGTG +
Preference number: 2 (lower is better)
Translates to: INLSWRNRSLFFSEA*SHNLMCSLLQAKGV
Trigger: CACACCCTTGGCCTGAAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCTGTTCCTCCAACTCAGATTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 2 (lower is better)
Translates to: IATRGSRDWGWVDIINLGEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 2 (lower is better)
Translates to: TTDLATSFTNTCITTFYSCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGCCTGGCACTGGAATTaGCCGGGAGATTCTCATTAC +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLAWHWN*PGDSHY
Trigger: GTAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGCAGTGGTGGACACTTaGGGAAAGAGAAAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLAVVDT*GKRKPE
Trigger: CTCTGGCTTTCTCTTTCCTCAAGTGTCCACCACTGC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCTGCACCAGGGACACTaGCCTGAAACCCTGGATTTT +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLLHQGH*PETLDF
Trigger: AAAATCCAGGGTTTCAGGTCAGTGTCCCTGGTGCAG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 2 (lower is better)
Translates to: TDLATSFTNTCITTFYSKWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...TTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGTCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 2 (lower is better)
Translates to: PGCEEYISSRFPTASEWGSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCATTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 2 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGCAGGGACCTCTGGTTaGTCAATAACTCATAGGCTT +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHAGTSG*SITHRL
Trigger: AAGCCTATGAGTTATTGAGCAACCAGAGGTCCCTGC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTCAGCAAGGCTTTCTTaGACTGCACCAGGGACACTG +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLSARLS*TAPGTL
Trigger: CAGTGTCCCTGGTGCAGTGCAAGAAAGCCTTGCTGA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTCAGCAAGGCTTTCTTaGACTGCACCAGGGACACTG +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCSARLS*TAPGTL
Trigger: CAGTGTCCCTGGTGCAGTGCAAGAAAGCCTTGCTGA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTGGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTAGCAATGATAATGCACCATCTATGGTGGGGCCTCTTTaGCTGATTCTTCAAAGCAAG +
Preference number: 2 (lower is better)
Translates to: LGLPLFSLCFGSNDNAPSMVGPL*LILQSK
Trigger: CTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCAT...AGATGGTGCATTATCATTGCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGCAAATGATGGGCAGTaGTGGACACTTGAGGAAAGA +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHANDGQ*WTLEER
Trigger: TCTTTCCTCAAGTGTCCACCACTGCCCATCATTTGC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 90 bp GCACAAATCTGTTTCTTTCTTGTCTACTCTAAGGAGATAGGGAAGTaGCTAAAGGCAGGGCCAAGTCTTTCTGCAAATGATGGGCAGTGG +
Preference number: 2 (lower is better)
Translates to: AQICFFLVYSKEIGK*LKAGPSLSANDGQW
Trigger: CCACTGCCCATCATTTGCAGAAAGACTTGGCCCTGCCTTTAGCAACTTCCCTATCTCCTTAGAGTAGACAAGAAAGAAACAGATTTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 2 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 2 (lower is better)
Translates to: SLILGHPVRETTDLATSFEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAAGTCTTCCTTGACTTaGGATTTTTCTTGGTCTGTA +
Preference number: 2 (lower is better)
Translates to: PGCEEYISSRFPTASEWGKSSLT*DFSWSV
Trigger: TACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTT...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: SLILGHPVRETTDLATSFTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTGGACACTTCTGATATaGGCCATTTCTGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCWTLLI*AISASA
Trigger: GGCAGAGGCAGAAATGGCTCATATCAGAAGTGTCCA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGCCTGGCACTGGAATTaGCCGGGAGATTCTCATTAC +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEAWHWN*PGDSHY
Trigger: GTAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGAGGATTTAGGGGACTaGATGAGCTTGGACAACTTT +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHEDLGD*MSLDNF
Trigger: AAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCCTC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGAGTGTAAGGATACATaGGCCAACTGTGCAATGGTT +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHECKDT*ANCAMV
Trigger: AACCATTGCACAGTTGGCTCATGTATCCTTACACTC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCCAGGGACACTGACCTaGAACCCTGGATTTTACCTA +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLPGTLT*NPGFYL
Trigger: TAGGTAAAATCCAGGGTTTCAGGTCAGTGTCCCTGG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 2 (lower is better)
Translates to: SLILGHPVRETTDLATSFKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp TTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: LATSFTNTCITTFYSKCPLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...TGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GTGAAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 2 (lower is better)
Translates to: VKALGKQREYVTFNIIVPPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...AGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 2 (lower is better)
Translates to: ILGHPVRETTDLATSFTNKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618625.4
3UTR-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGGCTTTGGGTTGGTATaGCATTTTACTCCACAAACG +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHGFGLV*HFTPQT
Trigger: CGTTTGTGGAGTAAAATGCCATACCAACCCAAAGCC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCAGTTGCTATCAATATaGGATAGTTGGGGTGGAATA +
Preference number: 2 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLQLLSI*DSWGGI
Trigger: TATTCCACCCCAACTATCCCATATTGATAGCAACTG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 90 bp ATGAACGATGAAGCACAAAATCCAGCCTCATTATGCAAAGAACACTaGAGAAGTGTCAGCAGTCACATGAAACAAAGCCGAGAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: MNDEAQNPASLCKEH*RSVSSHMKQSREAD
Trigger: GTCAGCCTCTCGGCTTTGTTTCATGTGACTGCTGACACTTCTCAAGTGTTCTTTGCATAATGAGGCTGGATTTTGTGCTTCATCGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GTGAAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 2 (lower is better)
Translates to: VKALGKQREYVTFNIIVPCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...AGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAAATACTGTACCCACTaGATACATAAACAGCTGTAC +
Preference number: 2 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLKYCTH*IHKQLY
Trigger: GTACAGCTGTTTATGTATTCAGTGGGTACAGTATTT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAAGTCTTTCTGCAAATaGTGGGCAGTGGTGGACACT +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCKSFCK*WAVVDT
Trigger: AGTGTCCACCACTGCCCATCATTTGCAGAAAGACTT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 2 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGATATGAGCCATTTCTaGCTCTGCCAAGATTTTGCA +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHDMSHF*LCQDFA
Trigger: TGCAAAATCTTGGCAGAGGCAGAAATGGCTCATATC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCCCCAGAGCTAAACTaGAACTTGGAATGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESPELN*NLECRD
Trigger: GTCCCTGCATTCCAAGTTGCAGTTTAGCTCTGGGGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGTCTTGGACATTGAGTaGTCAGTCACTGTCTCAGTG +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLVLDIE*SVTVSV
Trigger: CACTGAGACAGTGACTGAGCACTCAATGTCCAAGAC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 2 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTCTGGAATCAGCTGCTaGAGAAAGAGGCAAGTGGTT +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLSGISC*RKRQVV
Trigger: AACCACTTGCCTCTTTCTCCAGCAGCTGATTCCAGA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCTTTTCACATTCAGCTaGGTCATCACAAGACACAGA +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHLFTFS*VITRHR
Trigger: TCTGTGTCTTGTGATGACCCAGCTGAATGTGAAAAG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAGTCTCAGCATTTCATaGAATCCTGAGATGCCCAAA +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHSLSIS*NPEMPK
Trigger: TTTGGGCATCTCAGGATTCCATGAAATGCTGAGACT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 90 bp CAGGATCCAGGTATGTGGGTTTCATACCTTGACTTGGGTGTTCTTTaGAATGGACTGACATTAGATGCTGGTCCTCACTATCATCTACTT +
Preference number: 2 (lower is better)
Translates to: QDPGMWVSYLDLGVL*NGLTLDAGPHYHLL
Trigger: AAGTAGATGATAGTGAGGACCAGCATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGGATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR TCA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 2 (lower is better)
Translates to: ETTDLATSFTNTCITTFYTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCTCATTACCTTACTCTaGCCTTTGGAGCTATTCCCA +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCLITLL*PLELFP
Trigger: TGGGAATAGCTCCAAAGGTCAGAGTAAGGTAATGAG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCAGGAGGGGGACCTCTaGGTCCAGTTGCTATCAATA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAQEGDL*VQLLSI
Trigger: TATTGATAGCAACTGGACTCAGAGGTCCCCCTCCTG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCAGGCAGTAAAGGATTaGCCCCTTCAGACCAAGCCA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAQAVKD*PLQTKP
Trigger: TGGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGCAGTGGTGGACACTTaGGGAAAGAGAAAGCCAGAG +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAAVVDT*GKRKPE
Trigger: CTCTGGCTTTCTCTTTCCTCAAGTGTCCACCACTGC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGATGTTAAATCAATCTaGGTTGGAGGAACAGATCTC +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHDVKSI*VGGTDL
Trigger: GAGATCTGTTCCTCCAACTCAGATTGATTTAACATC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATACTAAGTATTCTTTCTaGATCTTTCTTGCAGCCGGT +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHTKYSF*IFLAAG
Trigger: ACCGGCTGCAAGAAAGATTCAGAAAGAATACTTAGT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCTCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 2 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCACATGAAATTCATTTaGCCCTTGTGTAAGAACATT +
Preference number: 2 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLHMKFI*PLCKNI
Trigger: AATGTTCTTACACAAGGGGCAAATGAATTTCATGTG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGGAATTTTCAAACACTaGCCAGGTGATGCCTATGCA +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLGIFKH*PGDAYA
Trigger: TGCATAGGCATCACCTGGGCAGTGTTTGAAAATTCC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAAGGCTTTCTTGCACTaGACCAGGGACACTGACCTG +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEKAFLH*TRDTDL
Trigger: CAGGTCAGTGTCCCTGGTGCAGTGCAAGAAAGCCTT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp CTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 2 (lower is better)
Translates to: LGKQREYVTFNIIVPFCVAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...CACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCGTAATCCTAATAAAATaGACGAGGAGTGTAAAGGTT +
Preference number: 2 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLVILIK*TRSVKV
Trigger: AACCTTTACACTCCTCGTCCATTTTATTAGGATTAC...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCCTTACTCTGACCTTTaGAGCTATTCCCATTGCTCT +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLPYSDL*SYSHCS
Trigger: AGAGCAATGGGAATAGCTCCAAAGGTCAGAGTAAGG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCAGTTGCTATCAATATaGGATAGTTGGGGTGGAATA +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHQLLSI*DSWGGI
Trigger: TATTCCACCCCAACTATCCCATATTGATAGCAACTG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGGCCAGGAAGGTCCCTaGTGGGGGCTTTTCAATAAT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDGQEGP*WGLFNN
Trigger: ATTATTGAAAAGCCCCCACCAGGGACCTTCCTGGCC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 90 bp CCCATTGCTCTGGGAAGCAAATACCTAGTTTCCCAGAACTTTTATTaGGACACTTCTGATATGAGCCATTTCTGCCTCTGCCAAGATTTT +
Preference number: 2 (lower is better)
Translates to: PIALGSKYLVSQNFY*DTSDMSHFCLCQDF
Trigger: AAAATCTTGGCAGAGGCAGAAATGGCTCATATCAGAAGTGTCCAAATAAAAGTTCTGGGAAACTAGGTATTTGCTTCCCAGAGCAATGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAAATACTGTACCCACTaGATACATAAACAGCTGTAC +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHKYCTH*IHKQLY
Trigger: GTACAGCTGTTTATGTATTCAGTGGGTACAGTATTT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATGGACACTTCTGATATaGGCCATTTCTGCCTCTGCC +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEWTLLI*AISASA
Trigger: GGCAGAGGCAGAAATGGCTCATATCAGAAGTGTCCA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTTAACTCCCAGAGGTaGGCTCAAGTTCTCTATGTC +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEFNSQR*AQVLYV
Trigger: GACATAGAGAACTTGAGCTCACCTCTGGGAGTTAAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCACTCAAGAACACATaGGACTTTCGTCAATGGCAC +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESLKNT*DFRQWH
Trigger: GTGCCATTGACGAAAGTCTCATGTGTTCTTGAGTGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACATTTCATGGAATCCTaGGATGCCCAAATCTCTGGA +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEHFMES*DAQISG
Trigger: TCCAGAGATTTGGGCATCTCAGGATTCCATGAAATG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 2 (lower is better)
Translates to: ETTDLATSFTNTCITTFYSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTCTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 2 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTTTCCGTCTGTCCCATaGCAAATCATGAAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCFPSVP*QIMKAF
Trigger: AAAGGCTTTCATGATTTGGCATGGGACAGACGGAAA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATTCCATTAGCATCCTaGTGTGGTTTTCTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHIPLAS*CGFLFK
Trigger: CTTGAAAAGAAAACCACAGCAGGATGCTAATGGAAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCGTATCTATTGCTTTTaGCATTCTCAAAACATTGGC +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHRIYCF*HSQNIG
Trigger: GCCAATGTTTTGAGAATGGCAAAAGCAATAGATACG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAACTGCAACTTGGAATaGAGGGACCTCTGGTTGCTC +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYANCNLE*RDLWLL
Trigger: GAGCAACCAGAGGTCCCTGCATTCCAAGTTGCAGTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATCCCCAGAGCTAAACTaGAACTTGGAATGCAGGGAC +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDESPELN*NLECRD
Trigger: GTCCCTGCATTCCAAGTTGCAGTTTAGCTCTGGGGA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAACATTCACTGAACATTaGTGGTTGGCCCTTAGACCA +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLETFTEH*WLALRP
Trigger: TGGTCTAAGGGCCAACCAGCAATGTTCAGTGAATGT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATCTCATGTGCTCACTaGTTCAGGCCAAGGGTGTGT +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEISCAH*FRPRVC
Trigger: ACACACCCTTGGCCTGAAGCAGTGAGCACATGAGAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTTTGACTCAGTCTTTTaGAGTGCCAAAGTCATTGTT +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHFDSVF*SAKVIV
Trigger: AACAATGACTTTGGCACTGCAAAAGACTGAGTCAAA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 2 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CCA 90 bp GTGAAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: VKALGKQREYVTFNIIVPGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...AGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGGCTTTGGGTTGGTATaGCATTTTACTCCACAAACG +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEGFGLV*HFTPQT
Trigger: CGTTTGTGGAGTAAAATGCCATACCAACCCAAAGCC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGAGGGTGACTGTCTTTaGTTAATGTCTCTCAAGGTA +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLEGDCL*LMSLKV
Trigger: TACCTTGAGAGACATTAACCAAAGACAGTCACCCTC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGAGGGTGACTGTCTTTaGTTAATGTCTCTCAAGGTA +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCEGDCL*LMSLKV
Trigger: TACCTTGAGAGACATTAACCAAAGACAGTCACCCTC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTCTGTTAGAATGAATTaGAACATCTTGCTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHSVRMN*NILLFR
Trigger: CCTGAACAGCAAGATGTTCCAATTCATTCTAACAGA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCTGAACATTGCTGGTTaGCCCTTAGACCATTTTGTT +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLLNIAG*PLDHFV
Trigger: AACAAAATGGTCTAAGGGCCAACCAGCAATGTTCAG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGCTCAAGCAATCCTCTaGCTTCACCTTCCCAAGTGT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDAQAIL*LHLPKC
Trigger: ACACTTGGGAAGGTGAAGCCAGAGGATTGCTTGAGC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCAAGGGAATTGATGTaGACAAAACAGCTGCCAGCA +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESRELM*TKQLPA
Trigger: TGCTGGCAGCTGTTTTGTCCACATCAATTCCCTTGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGTCAGTAATGCCACTTaGCAAATACATCAAATATGC +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHVSNAT*QIHQIC
Trigger: GCATATTTGATGTATTTGCCAAGTGGCATTACTGAC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTATGTATCCTTCCATTTaGACAGCTGTCTCCTTGATA +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLMYPSI*TAVSLI
Trigger: TATCAAGGAGACAGCTGTTCAAATGGAAGGATACAT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAAGTCTTTCTGCAAATaGTGGGCAGTGGTGGACACT +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEKSFCK*WAVVDT
Trigger: AGTGTCCACCACTGCCCATCATTTGCAGAAAGACTT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCAGCATTATTGTGCTTaGGCCAAAAAGGAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLQHYCA*AKKEEK
Trigger: CTTTTCTTCCTTTTTGGCTCAAGCACAATAATGCTG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCAGCATTATTGTGCTTaGGCCAAAAAGGAAGAAAAG +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCQHYCA*AKKEEK
Trigger: CTTTTCTTCCTTTTTGGCTCAAGCACAATAATGCTG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAATGGGATATACTTGTaGTCTTCAACTTGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLENGIYL*SSTWPW
Trigger: CCAAGGCCAAGTTGAAGATCACAAGTATATCCCATT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp GTGAAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 2 (lower is better)
Translates to: VKALGKQREYVTFNIIVPKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...AGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTTCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCACATGAAATTCATTTaGCCCTTGTGTAAGAACATT +
Preference number: 2 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHHMKFI*PLCKNI
Trigger: AATGTTCTTACACAAGGGGCAAATGAATTTCATGTG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAACACAAATCACCCGTTaGCTAGATTCAGTTTCCATG +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLETQITR*LDSVSM
Trigger: CATGGAAACTGAATCTAGGCAACGGGTGATTTGTGT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGACACAGAGCAAAACTaGCCAGATCTTGTACAGGCA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYADTEQN*PDLVQA
Trigger: TGCCTGTACAAGATCTGGGCAGTTTTGCTCTGTGTC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGCAGGGACCTCTGGTTaGTCAATAACTCATAGGCTT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDAGTSG*SITHRL
Trigger: AAGCCTATGAGTTATTGAGCAACCAGAGGTCCCTGC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACAGTGGGCTTTGGGTTaGTATGGCATTTTACTCCAC +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEQWALG*YGILLH
Trigger: GTGGAGTAAAATGCCATACCAACCCAAAGCCCACTG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGAGATTTGGGGCTGTTaGATTCAGCAAGGAATGAGC +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDEIWGC*IQQGMS
Trigger: GCTCATTCCTTGCTGAATCCAACAGCCCCAAATCTC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGAGATTTGGGGCTGTTaGATTCAGCAAGGAATGAGC +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEEIWGC*IQQGMS
Trigger: GCTCATTCCTTGCTGAATCCAACAGCCCCAAATCTC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTCACTGAACATTGCTaGTTGGCCCTTAGACCATTT +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEFTEHC*LALRPF
Trigger: AAATGGTCTAAGGGCCAACCAGCAATGTTCAGTGAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTTCTTGTGGATCCTATaGTTGCTACTAACTCTTAGG +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCFLWIL*LLLTLR
Trigger: CCTAAGAGTTAGTAGCAACCATAGGATCCACAAGAA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAGTCTCAGCATTTCATaGAATCCTGAGATGCCCAAA +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESLSIS*NPEMPK
Trigger: TTTGGGCATCTCAGGATTCCATGAAATGCTGAGACT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 90 bp TGTCCCATGCCAAATCATGAAAGCCTTTTCCAGAGGATATACCTATaGGCATTGTCCCTCAAGAATACTAAGCAGTGTGCTTTTATTTCA +
Preference number: 2 (lower is better)
Translates to: CPMPNHESLFQRIYL*ALSLKNTKQCAFIS
Trigger: TGAAATAAAAGCACACTGCTTAGTATTCTTGAGGGACAATGCCAATAGGTATATCCTCTGGAAAAGGCTTTCATGATTTGGCATGGGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTATTTGGACACTTCTaGTATGAGCCATTTCTGCCT +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLELFGHF*YEPFLP
Trigger: AGGCAGAAATGGCTCATATCAGAAGTGTCCAAATAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCTCATTACCTTACTCTaGCCTTTGGAGCTATTCCCA +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDLITLL*PLELFP
Trigger: TGGGAATAGCTCCAAAGGTCAGAGTAAGGTAATGAG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTTTAACTCCCAGAGGTaGGCTCAAGTTCTCTATGTC +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDFNSQR*AQVLYV
Trigger: GACATAGAGAACTTGAGCTCACCTCTGGGAGTTAAA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACAAGTCAAACAGACTTaGTCTGTCCTTTCCAAAAGA +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEQVKQT*SVLSKR
Trigger: TCTTTTGGAAAGGACAGATCAAGTCTGTTTGACTTG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGGATTCAGCAAGGAATaGGCATGGCTTGATTCAGTA +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEGFSKE*AWLDSV
Trigger: TACTGAATCAAGCCATGCTCATTCCTTGCTGAATCC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTACACATCTGTTAGAATaGATTGGAACATCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCTHLLE*IGTSCC
Trigger: ACAGCAAGATGTTCCAATTCATTCTAACAGATGTGT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATACGTAAACATTCACTaGACATTGCTGGTTGGCCCT +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEYVNIH*TLLVGP
Trigger: AGGGCCAACCAGCAATGTTCAGTGAATGTTTACGTA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCACTCAAGAACACATaGGACTTTCGTCAATGGCAC +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASLKNT*DFRQWH
Trigger: GTGCCATTGACGAAAGTCTCATGTGTTCTTGAGTGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCATTTCATGGAATCCTaGGATGCCCAAATCTCTGGA +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDHFMES*DAQISG
Trigger: TCCAGAGATTTGGGCATCTCAGGATTCCATGAAATG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACTGTGGTCTATTTATTaGCCACACCTTATAAACAGG +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLELWSIY*PHLINR
Trigger: CCTGTTTATAAGGTGTGGTCAATAAATAGACCACAG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGAGCTTCGTATCTATTaGTTTTGCCATTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCELRIY*FCHSQN
Trigger: GTTTTGAGAATGGCAAAAGCAATAGATACGAAGCTC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGAGCTTCGTATCTATTaGTTTTGCCATTCTCAAAAC +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLELRIY*FCHSQN
Trigger: GTTTTGAGAATGGCAAAAGCAATAGATACGAAGCTC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAACATTCACTGAACATTaGTGGTTGGCCCTTAGACCA +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDETFTEH*WLALRP
Trigger: TGGTCTAAGGGCCAACCAGCAATGTTCAGTGAATGT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTACAAAGTTCCAATGTaGATGCATTGTTCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLYKVPM*MHCSLQ
Trigger: CTGAAGAGAACAATGCATGCACATTGGAACTTTGTA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTTTTATCAAAATGGGTaGCATGAGGGTCCCAGACCA +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDFYQNG*HEGPRP
Trigger: TGGTCTGGGACCCTCATGGCACCCATTTTGATAAAA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCTTCATATTTCACAGTaGGCTTTGGGTTGGTATGGC +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYALHISQ*ALGWYG
Trigger: GCCATACCAACCCAAAGCCCACTGTGAAATATGAAG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCTTCATATTTCACAGTaGGCTTTGGGTTGGTATGGC +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDLHISQ*ALGWYG
Trigger: GCCATACCAACCCAAAGCCCACTGTGAAATATGAAG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACCTTACTCTGACCTTTaGAGCTATTCCCATTGCTCT +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEPYSDL*SYSHCS
Trigger: AGAGCAATGGGAATAGCTCCAAAGGTCAGAGTAAGG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAATGATGGGCAGTGGTaGACACTTGAGGAAAGAGAA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYANDGQW*TLEERE
Trigger: TTCTCTTTCCTCAAGTGTCCACCACTGCCCATCATT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATCTCAAATCACAGGGTaGCAGGTTTATCCCCAAATC +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDESQITG*QVYPQI
Trigger: GATTTGGGGATAAACCTGCCACCCTGTGATTTGAGA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCTCAAATCACAGGGTaGCAGGTTTATCCCCAAATC +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASQITG*QVYPQI
Trigger: GATTTGGGGATAAACCTGCCACCCTGTGATTTGAGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCAAGGGAATTGATGTaGACAAAACAGCTGCCAGCA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASRELM*TKQLPA
Trigger: TGCTGGCAGCTGTTTTGTCCACATCAATTCCCTTGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGGATCTCCTTGTATCTaGTTCCATCTCCCCTCATTT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDGSPCI*FHLPSF
Trigger: AAATGAGGGGAGATGGAACCAGATACAAGGAGATCC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 90 bp TATGGCTTTACAGAAGACACAGTCACCCAACAGGCTGGTTCTAGATaGCTTTGGTTTCCACATGAGACTTTTCAATTGTTTAAAATGAAC +
Preference number: 2 (lower is better)
Translates to: YGFTEDTVTQQAGSR*LWFPHETFQLFKMN
Trigger: GTTCATTTTAAACAATTGAAAAGTCTCATGTGGAAACCAAAGCAATCTAGAACCAGCCTGTTGGGTGACTGTGTCTTCTGTAAAGCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGTTAAAAATGGAGCATaGAAGGAGCTGGGAGCTTTA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAVKNGA*KELGAL
Trigger: TAAAGCTCCCAGCTCCTTTCATGCTCCATTTTTAAC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGTTAAAAATGGAGCATaGAAGGAGCTGGGAGCTTTA +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDVKNGA*KELGAL
Trigger: TAAAGCTCCCAGCTCCTTTCATGCTCCATTTTTAAC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAATGGGATATACTTGTaGTCTTCAACTTGGCCTTGG +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYANGIYL*SSTWPW
Trigger: CCAAGGCCAAGTTGAAGATCACAAGTATATCCCATT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTATGCAAAGAACACTTaGGAAGTGTCAGCAGTCACA +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDYAKNT*EVSAVT
Trigger: TGTGACTGCTGACACTTCTCAAGTGTTCTTTGCATA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTCTGGAACACGGACATaGACAGTAAGTGAAACTTTC +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSGTRT*TVSETF
Trigger: GAAAGTTTCACTTACTGTTCATGTCCGTGTTCCAGA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTTTCCGTCTGTCCCATaGCAAATCATGAAAGCCTTT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDFPSVP*QIMKAF
Trigger: AAAGGCTTTCATGATTTGGCATGGGACAGACGGAAA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGCATTATTTCTTACTTaGATATCAGCAATGTGTCAG +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCALFLT*ISAMCQ
Trigger: CTGACACATTGCTGATATGCAAGTAAGAAATAATGC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGCATTATTTCTTACTTaGATATCAGCAATGTGTCAG +
Preference number: 2 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLALFLT*ISAMCQ
Trigger: CTGACACATTGCTGATATGCAAGTAAGAAATAATGC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGATATGAGCCATTTCTaGCTCTGCCAAGATTTTGCA +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEDMSHF*LCQDFA
Trigger: TGCAAAATCTTGGCAGAGGCAGAAATGGCTCATATC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATGCAGTGTTGTTCATTaGAAGTCAAACAGACTTGAT +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLECSVVH*KSNRLD
Trigger: ATCAAGTCTGTTTGACTTGCAATGAACAACACTGCA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAGGAAAGATTTAGTCTaGATTGGCTTTGAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDRKDLV*IGFEGD
Trigger: GTCACCCTCAAAGCCAATGCAGACTAAATCTTTCCT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAGGAAAGATTTAGTCTaGATTGGCTTTGAGGGTGAC +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDERKDLV*IGFEGD
Trigger: GTCACCCTCAAAGCCAATGCAGACTAAATCTTTCCT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACACACAAATCACCCGTTaGCTAGATTCAGTTTCCATG +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDTQITR*LDSVSM
Trigger: CATGGAAACTGAATCTAGGCAACGGGTGATTTGTGT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATACAAAGTTCCAATGTaGATGCATTGTTCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEYKVPM*MHCSLQ
Trigger: CTGAAGAGAACAATGCATGCACATTGGAACTTTGTA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTTGACTCAGTCTTTTaGAGTGCCAAAGTCATTGTT +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEFDSVF*SAKVIV
Trigger: AACAATGACTTTGGCACTGCAAAAGACTGAGTCAAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTGTGGACAAAACAGCTaGCAGCATGATAGTGTTTGT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDCGQNS*QHDSVC
Trigger: ACAAACACTATCATGCTGGCAGCTGTTTTGTCCACA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAGAGGATATACCTATTaGCATTGTCCCTCAAGAATA +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLERGYTY*HCPSRI
Trigger: TATTCTTGAGGGACAATGCCAATAGGTATATCCTCT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGTAATCCTAATAAAATaGACGAGGAGTGTAAAGGTT +
Preference number: 2 (lower is better)
Translates to: AFHGILRCPNLWKLPISCVILIK*TRSVKV
Trigger: AACCTTTACACTCCTCGTCCATTTTATTAGGATTAC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCAATATGGGATAGTTaGGGTGGAATATTTAACTCC +
Preference number: 2 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESIWDS*GGIFNS
Trigger: GGAGTTAAATATTCCACCCCAACTATCCCATATTGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAACCTTAGAGGTTATCTaGTCCAACATCTTCAGAGGA +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDETLEVI*SNIFRG
Trigger: TCCTCTGAAGATGTTGGACCAGATAACCTCTAAGGT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCTTTTCACATTCAGCTaGGTCATCACAAGACACAGA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYALFTFS*VITRHR
Trigger: TCTGTGTCTTGTGATGACCCAGCTGAATGTGAAAAG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 90 bp ATGCAAATCTCTAAATGGGATATACTTGTGATCTTCAACTTGGCCTaGGATATCTGTGTGACTGATTTAACCTTTGACTCAGTCTTTTGC +
Preference number: 2 (lower is better)
Translates to: MQISKWDILVIFNLA*DICVTDLTFDSVFC
Trigger: GCAAAAGACTGAGTCAAAGGTTAAATCAGTCACACAGATATCCAAGGCCAAGTTGAAGATCACAAGTATATCCCATTTAGAGATTTGCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 90 bp CTAAGTATGCAAATCTCTAAATGGGATATACTTGTGATCTTCAACTaGGCCTTGGATATCTGTGTGACTGATTTAACCTTTGACTCAGTC +
Preference number: 2 (lower is better)
Translates to: LSMQISKWDILVIFN*ALDICVTDLTFDSV
Trigger: GACTGAGTCAAAGGTTAAATCAGTCACACAGATATCCAAGGCCAAGTTGAAGATCACAAGTATATCCCATTTAGAGATTTGCATACTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATGTATCCTTCCATTTaGACAGCTGTCTCCTTGATA +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEMYPSI*TAVSLI
Trigger: TATCAAGGAGACAGCTGTTCAAATGGAAGGATACAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCATCTCTGTTTTTCTCTaGAGCGTTGTCACACAATCT +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAISVFL*SVVTQS
Trigger: AGATTGTGTGACAACGCTTCAGAGAAAAACAGAGAT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATCTCTGTTTTTCTCTaGAGCGTTGTCACACAATCT +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEISVFL*SVVTQS
Trigger: AGATTGTGTGACAACGCTTCAGAGAAAAACAGAGAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGATGTTAAATCAATCTaGGTTGGAGGAACAGATCTC +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEDVKSI*VGGTDL
Trigger: GAGATCTGTTCCTCCAACTCAGATTGATTTAACATC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTTAAATCAAGGGAATTaGTGTGGACAAAACAGCTGC +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDLNQGN*CGQNSC
Trigger: GCAGCTGTTTTGTCCACATCAATTCCCTTGATTTAA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATTTTGCCTGCTTACATaGAGTGTTGTTCATTGCAAG +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEFCLLT*SVVHCK
Trigger: CTTGCAATGAACAACACTGCATGTAAGCAGGCAAAA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGTGACAGCATTATTGTaGTTGAGCCAAAAAGGAAGA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAVTALL*LSQKGR
Trigger: TCTTCCTTTTTGGCTCAAGCACAATAATGCTGTCAC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAGATGCCCAAATCTCTaGAAACTTCCTATTTCCTGT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDRCPNL*KLPISC
Trigger: ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTGTCAGATGGGATTCTaGCAAGATGTGGCAATATTT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDCQMGF*QDVAIF
Trigger: AAATATTGCCACATCTTGCCAGAATCCCATCTGACA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACACACATCTGTTAGAATaGATTGGAACATCTTGCTGT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDTHLLE*IGTSCC
Trigger: ACAGCAAGATGTTCCAATTCATTCTAACAGATGTGT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAAACCAGTCAAAGCATaGGACATGACATCTTTCATT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDKPVKA*DMTSFI
Trigger: AATGAAAGATGTCATGTCTCATGCTTTGACTGGTTT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACATTCCATTAGCATCCTaGTGTGGTTTTCTTTTCAAG +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDIPLAS*CGFLFK
Trigger: CTTGAAAAGAAAACCACAGCAGGATGCTAATGGAAT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACGTATCTATTGCTTTTaGCATTCTCAAAACATTGGC +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDERIYCF*HSQNIG
Trigger: GCCAATGTTTTGAGAATGGCAAAAGCAATAGATACG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAATCCAGCCTCATTATaGAAAGAACACTTGAGAAGT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDNPASL*KEHLRS
Trigger: ACTTCTCAAGTGTTCTTTGCATAATGAGGCTGGATT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACATAATGATTTGTTCTaGAATCAGCTGCTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEHNDLF*NQLLEK
Trigger: TTTCTCCAGCAGCTGATTCCAGAACAAATCATTATG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCATAATGATTTGTTCTaGAATCAGCTGCTGGAGAAA +
Preference number: 2 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAHNDLF*NQLLEK
Trigger: TTTCTCCAGCAGCTGATTCCAGAACAAATCATTATG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAGAGGATATACCTATTaGCATTGTCCCTCAAGAATA +
Preference number: 2 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDERGYTY*HCPSRI
Trigger: TATTCTTGAGGGACAATGCCAATAGGTATATCCTCT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACATAAGAAAAGAGATTTaGGGCTGTTGGATTCAGCAA +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDIRKEI*GCWIQQ
Trigger: TTGCTGAATCCAACAGCCCCAAATCTCTTTTCTTAT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTCTGTTAGAATGAATTaGAACATCTTGCTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSVRMN*NILLFR
Trigger: CCTGAACAGCAAGATGTTCCAATTCATTCTAACAGA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTACGTTAGCAATGCTTaGGATGGTAATTCAAAGTCA +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDYVSNA*DGNSKS
Trigger: TGACTTTGAATTACCATCCCAAGCATTGCTAACGTA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACATAAGCTTCTCTTATTaGATCTCCTTGTATCTGGTT +
Preference number: 2 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDISFSY*ISLYLV
Trigger: AACCAGATACAAGGAGATCCAATAAGAGAAGCTTAT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 72 bp TGGCTGGTCACGTGCTGCAGGAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGCATCTCCCTGGGGTGC +
Preference number: 3 (lower is better)
Translates to: WLVTCCRSNPSQ*GQWTHSISLGC
Trigger: GCACCCCAGGGAGATGCTGTGTGTCCACTGGCCTCACTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 72 bp CAAGTCAGTGAGGCCAGTGGACACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTGTGGTTGGACAGAGGG +
Preference number: 3 (lower is better)
Translates to: QVSEASGHTASP*GAQSVLWLDRG
Trigger: CCCTCTGTCCAACCACAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTGTCCACTGGCCTCACTGACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 72 bp TCCAAGGGTTTAGCGGAGCCAAAGGGGGTTTTCTCCTaGGGCAGCAGCCAGGGCGTATCCTGGTCAGTCTCA +
Preference number: 3 (lower is better)
Translates to: SKGLAEPKGVFS*GSSQGVSWSVS
Trigger: TGAGACTGACCAGGATACGCCCTGGCTGCTGCCCCAGGAGAAAACCCCCTTTGGCTCCGCTAAACCCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR TCA 72 bp GCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTaGTCATATGAGCTGGCTGGTCACGTGCTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: APSQFCFGGSRE*SYELAGHVLQE
Trigger: CTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 3 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 3 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 3 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 3 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp AAAGCATCTTTACCTGCTTCATTCAACAGAGTGGCCGGTGCACCTGCAGGGCCCTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 3 (lower is better)
Translates to: KASLPASFNRVAGAPAGPYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...GGGCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAGCAGGTAAAGATGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR GCA 72 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTAAGGGGGACAGTGACA +
Preference number: 3 (lower is better)
Translates to: SRFPTASEWGTT*FTWQCLRGTVT
Trigger: TGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR GCA 72 bp TTTACCTGCTTCATTCAACAGAGTGGCCGGTGCACCTaGAGGGCCCACAGCCAGCTCACACACATCAGTAAT +
Preference number: 3 (lower is better)
Translates to: FTCFIQQSGRCT*RAHSQLTHISN
Trigger: ATTACTGATGTGTGTGAGCTGGCTGTGGGCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAGCAGGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 72 bp TCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGGAGTAATCCAAGTCAG +
Preference number: 3 (lower is better)
Translates to: SALGAVGSDHMS*LVTCCRSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 72 bp CCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATT +
Preference number: 3 (lower is better)
Translates to: PTASEWGTTCFT*QCLRGTVTKLI
Trigger: AATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 72 bp GGTCGCTGGACTCCATGCACTCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCC +
Preference number: 3 (lower is better)
Translates to: GRWTPCTPVSMV*FAANLDKVFLS
Trigger: GGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 3 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 3 (lower is better)
Translates to: SRFPTASEWGTTCFTWQCPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...GCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 3 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 3 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp AAAGCATCTTTACCTGCTTCATTCAACAGAGTGGCCGGTGCACCTGCAGGGCCCGATGGTGGGGCCTCTTaGGCTGATTCTTCAAAGCAA +
Preference number: 3 (lower is better)
Translates to: KASLPASFNRVAGAPAGPDGGAS*ADSSKQ
Trigger: TTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATC...GGGCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAGCAGGTAAAGATGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CAA 90 bp GGACACCTTGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTGGGCTTGATGTTGCAGTGAAGTaGGCCAGGGCTTTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: GHLGILLIVLRSPGLLGLDVAVK*ARAFSA
Trigger: AGCTGAGAAAGCCCTGGCCAACTTCACTGCAACATC...AAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGCCAAGGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CAA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 3 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR GCA 72 bp TCAGGCCAAGGGTGTGTCAGCAAGGCTTTCTTGCACTaGACCAGGGACACTGACCTGAAACCCTGGATTTTA +
Preference number: 3 (lower is better)
Translates to: SGQGCVSKAFLH*TRDTDLKPWIL
Trigger: TAAAATCCAGGGTTTCAGGTCAGTGTCCCTGGTGCAGTGCAAGAAAGCCTTGCTGACACACCCTTGGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp TTGCCTTCCATGCTTATGCACTGGGGGTCCCAGGTGTaGGTTGTTTCAGGATTCTCTGGCTTCTCAATGACC +
Preference number: 3 (lower is better)
Translates to: LPSMLMHWGSQV*VVSGFSGFSMT
Trigger: GGTCATTGAGAAGCCAGAGAATCCTGAAACAACCCACACCTGGGACCCCCAGTGCATAAGCATGGAAGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 72 bp ATTTTAAAGCATCTTTACCTGCTTCATTCAACAGAGTaGCCGGTGCACCTGCAGGGCCCACAGCCAGCTCAC +
Preference number: 3 (lower is better)
Translates to: ILKHLYLLHSTE*PVHLQGPQPAH
Trigger: GTGAGCTGGCTGTGGGCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAGCAGGTAAAGATGCTTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CAA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 3 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 3 (lower is better)
Translates to: GTTCFTWQCLRGTVTKLIRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...AATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 3 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 3 (lower is better)
Translates to: GCEEYISSRFPTASEWGTRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGGATGTTGCAGTGAAGTaGGCCAGGGCTTTCTCAGCT +
Preference number: 3 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEDVAVK*ARAFSA
Trigger: AGCTGAGAAAGCCCTGGCCAACTTCACTGCAACATC...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR GCA 72 bp CTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGTATTTCTGTCCTGGAT +
Preference number: 3 (lower is better)
Translates to: LDSMHSSIHGLV*SEPGQGISVLD
Trigger: ATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
3UTR CCA 72 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATTAATCTTGGGTCACCC +
Preference number: 3 (lower is better)
Translates to: VTKLIATRGSRD*GWVDIINLGSP
Trigger: GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 72 bp GCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: ALQYPWSGLQRT*TRYFCPGCRLR
Trigger: TCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
3UTR CCA 72 bp ATGAAGGTCGCTGGACTCCATGCACTCCAGTATCCATaGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTC +
Preference number: 3 (lower is better)
Translates to: MKVAGLHALQYP*SGLQRTWTRYF
Trigger: GAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
3UTR CCA 72 bp CAAGGGGTCACCACTAGGTATCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTATCCATGGTCTGGTTT +
Preference number: 3 (lower is better)
Translates to: QGVTTRYLNEGR*TPCTPVSMVWF
Trigger: AAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGGTGACCCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397391.7
3UTR CCA 72 bp CTGGGGGTCCCAGGTGTGGGTTGTTTCAGGATTCTCTaGCTTCTCAATGACCTCAGGATCATAGAATGTGGA +
Preference number: 3 (lower is better)
Translates to: LGVPGVGCFRIL*LLNDLRIIECG
Trigger: TCCACATTCTATGATCCTGAGGTCATTGAGAAGCCAGAGAATCCTGAAACAACCCACACCTGGGACCCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 72 bp CATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTaGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTAGCA +
Preference number: 3 (lower is better)
Translates to: HTPYCSQESRAS*ACRCSLSVLVA
Trigger: TGCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CAA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 3 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCATATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTATGACCCCGGACACCTaGGCATACTCCTTATTGTTC +
Preference number: 3 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRMTPDT*AYSLLF
Trigger: GAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCAT...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR-3UTR CAA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCAACCAACACCAGGATGTaGTTATCCATGACCCCGGAC +
Preference number: 3 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPTNTRM*LSMTPD
Trigger: GTCCGGGGTCATGGATAACAACATCCTGGTGTTGGT...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR-3UTR CAA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 3 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR TCA 72 bp GCAAGGCTTTCTTGCACTGCACCAGGGACACTGACCTaGAACCCTGGATTTTACCTAGATCATGAGAGGTCT +
Preference number: 3 (lower is better)
Translates to: ARLSCTAPGTLT*NPGFYLDHERS
Trigger: AGACCTCTCATGATCTAGGTAAAATCCAGGGTTTCAGGTCAGTGTCCCTGGTGCAGTGCAAGAAAGCCTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 72 bp TCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTaGTTCAGGCCAAGGGTGTGTCAGCAAGGCTTTCTT +
Preference number: 3 (lower is better)
Translates to: SLKRCHTISCAH*FRPRVCQQGFL
Trigger: AAGAAAGCCTTGCTGACACACCCTTGGCCTGAAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp AAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATaGGTAGATATCATTAATCTTGGGTCACCCTGTAAG +
Preference number: 3 (lower is better)
Translates to: KLIATRGSRDWG*VDIINLGSPCK
Trigger: CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CCA 72 bp TCCCCCGGCCTGAGTCAGTGTCAGGATCCAGGTATGTaGGTTTCATACCTTGACTTGGGTGTTCTTTTGAAT +
Preference number: 3 (lower is better)
Translates to: SPGLSQCQDPGM*VSYLDLGVLLN
Trigger: ATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGGATCCTGACACTGACTCAGGCCGGGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CAA 90 bp TCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 3 (lower is better)
Translates to: SNQVAKSTSLLGFPLLQNQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...ATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCAATGACCCCGGACACCTaGGCATACTCCTTATTGTTC +
Preference number: 3 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPMTPDT*AYSLLF
Trigger: GAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCAT...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR-3UTR CAA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 3 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR TCA 72 bp AGGTGTGGGTTGTTTCAGGATTCTCTGGCTTCTCAATaGCCTCAGGATCATAGAATGTGGAGGGATTGGCCT +
Preference number: 3 (lower is better)
Translates to: RCGLFQDSLASQ*PQDHRMWRDWP
Trigger: AGGCCAATCCCTCCACATTCTATGATCCTGAGGTCATTGAGAAGCCAGAGAATCCTGAAACAACCCACACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR TCA 72 bp GGCAATGTGTTCACTTTCAAACAGGAGGGGGACCTCTaGGTCCAGTTGCTATCAATATGGGATAGTTGGGGT +
Preference number: 3 (lower is better)
Translates to: GNVFTFKQEGDL*VQLLSIWDSWG
Trigger: ACCCCAACTATCCCATATTGATAGCAACTGGACTCAGAGGTCCCCCTCCTGTTTGAAAGTGAACACATTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 72 bp CCTGGATGTAGGCTGAGAATCTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCCCACTCAGCTGCTTTC +
Preference number: 3 (lower is better)
Translates to: PGCRLRILNSVC*PAKWISHSAAF
Trigger: GAAAGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATTCTCAGCCTACATCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR GCA 72 bp ATCCTTTTATTTTTGGCCCAGGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGCCCTTCAAAGCCACTG +
Preference number: 3 (lower is better)
Translates to: ILLFLAQELAER*RSPCYSPSKPL
Trigger: CAGTGGCTTTGAAGGGCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
3UTR GCA 72 bp TGGTCAGTCTCAGAATGGAAGCTTTCTACCTCCCTCTaGTGGGTTGCCTTTCCCTCTTCTCTAGACTTAATG +
Preference number: 3 (lower is better)
Translates to: WSVSEWKLSTSL*WVAFPSSLDLM
Trigger: CATTAAGTCTAGAGAAGAGGGAAAGGCAACCCAGCAGAGGGAGGTAGAAAGCTTCCATTCTGAGACTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 72 bp CATGGTGAAGTCACTAGGTATCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTATCCATGGTCTGGTTT +
Preference number: 3 (lower is better)
Translates to: HGEVTRYLNEGR*TPCTPVSMVWF
Trigger: AAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGACTTCACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
3UTR CCA 72 bp CTAAATACTCCACCAGCAAGTCCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATCCCAAGGCACTCAGTA +
Preference number: 3 (lower is better)
Translates to: LNTPPASPHSQK*EESLGIPRHSV
Trigger: TACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACTTCTGACTATGAGGACTTGCTGGTGGAGTATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CAA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 3 (lower is better)
Translates to: TTDLATSFTNTCITTFYSPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp CCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACATATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: PVRETTDLATSFTNTCITYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...TGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: QPGCEEYISSRFPTASEWYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 3 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTTGGCCTTTCAGAAGTaGTGCGTAGTTTTGCAGGTC +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHLAFQK*CVVLQV
Trigger: GACCTGCAAAACTACGCACAACTTCTGAAAGGCCAA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 72 bp ACTGGAATTGACCGGGAGATTCTCATTACCTTACTCTaGCCTTTGGAGCTATTCCCATTGCTCTGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: TGIDREILITLL*PLELFPLLWEA
Trigger: TGCTTCCCAGAGCAATGGGAATAGCTCCAAAGGTCAGAGTAAGGTAATGAGAATCTCCCGGTCAATTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 72 bp TTAGTCAAGCTATCAGTGAAAGGAGTGTGTAAAACATaGGGGATCCAGGTAATCCAAACCACCCAGCTGGAG +
Preference number: 3 (lower is better)
Translates to: LVKLSVKGVCKT*GIQVIQTTQLE
Trigger: CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCACTGATAGCTTGACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 72 bp TTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTaGCACCAACACCAGGATGTTGTTATCCATGACCCC +
Preference number: 3 (lower is better)
Translates to: FFKASHVFSMWI*HQHQDVVIHDP
Trigger: GGGGTCATGGATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR CCA 72 bp CACCTCCAACAGATGAGCATCAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAAGATGCAGGTCACCAT +
Preference number: 3 (lower is better)
Translates to: HLQQMSIKSFYF*PRNWRKDAGHH
Trigger: ATGGTGACCTGCATCTTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTGATGCTCATCTGTTGGAGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618625.4
3UTR-3UTR CAA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: ISLILGHPVRETTDLATSYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTAGCCTGGCACTGGAATaGACCGGGAGATTCTCATTA +
Preference number: 3 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLSLALE*TGRFSL
Trigger: TAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGCT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGAGCTAAACTGCAACTaGGAATGCAGGGACCTCTGG +
Preference number: 3 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEELNCN*ECRDLW
Trigger: CCAGAGGTCCCTGCATTCCAAGTTGCAGTTTAGCTC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAAGGAGATAGGGAAGTaGCTAAAGGCAGGGCCAAGT +
Preference number: 3 (lower is better)
Translates to: AFHGILRCPNLWKLPISCKEIGK*LKAGPS
Trigger: ACTTGGCCCTGCCTTTAGCAACTTCCCTATCTCCTT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 72 bp ATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCACAAACACCTGCATAAC +
Preference number: 3 (lower is better)
Translates to: IINLGSPCKGDN*LGHILHKHLHN
Trigger: GTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR TCA 72 bp AGCTTTGACTTCTTTCAGGAAGCCTGGCACTGGAATTaGCCGGGAGATTCTCATTACCTTACTCTGACCTTT +
Preference number: 3 (lower is better)
Translates to: SFDFFQEAWHWN*PGDSHYLTLTF
Trigger: AAAGGTCAGAGTAAGGTAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGCTTCCTGAAAGAAGTCAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 72 bp CAAAACTGCCCAGATCTTGTACAGGCAGTAAAGGATTaGCCCCTTCAGACCAAGCCAGTTAAAGTGAGTCTT +
Preference number: 3 (lower is better)
Translates to: QNCPDLVQAVKD*PLQTKPVKVSL
Trigger: AAGACTCACTTTAACTGGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTGTACAAGATCTGGGCAGTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp CTTCTCCAACAGATGAGCATCAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAAGATGCAGGTCACCAT +
Preference number: 3 (lower is better)
Translates to: LLQQMSIKSFYF*PRNWRKDAGHH
Trigger: ATGGTGACCTGCATCTTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTGATGCTCATCTGTTGGAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CCA 72 bp GGTTGCTCAATAACTCATAGGCTTTTCACATTCAGCTaGGTCATCACAAGACACAGAGCAAAACTGCCCAGA +
Preference number: 3 (lower is better)
Translates to: GCSITHRLFTFS*VITRHRAKLPR
Trigger: TCTGGGCAGTTTTGCTCTGTGTCTTGTGATGACCCAGCTGAATGTGAAAAGCCTATGAGTTATTGAGCAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: ETTDLATSFTNTCITTFYYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GTGAAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 3 (lower is better)
Translates to: VKALGKQREYVTFNIIVPRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...AGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCATATACCTATTGGCATaGTCCCTCAAGAATACTAAG +
Preference number: 3 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLIYLLA*SLKNTK
Trigger: CTTAGTATTCTTGAGGGACAATGCCAATAGGTATAT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCAGAGGATATACCTATaGGCATTGTCCCTCAAGAAT +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHQRIYL*ALSLKN
Trigger: ATTCTTGAGGGACAATGCCAATAGGTATATCCTCTG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGCAAGTCAAACAGACTaGATCTGTCCTTTCCAAAAG +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHASQTD*ICPFQK
Trigger: CTTTTGGAAAGGACAGATCAAGTCTGTTTGACTTGC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAAGGAGATAGGGAAGTaGCTAAAGGCAGGGCCAAGT +
Preference number: 3 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEKEIGK*LKAGPS
Trigger: ACTTGGCCCTGCCTTTAGCAACTTCCCTATCTCCTT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 72 bp TTCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTTGACTTGAGATTTTTC +
Preference number: 3 (lower is better)
Translates to: FSSTGLWSMLPL*TPQVFLDLRFF
Trigger: GAAAAATCTCAAGTCAAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp ACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: TDLATSFTNTCITTFYSKYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...TTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp TCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 3 (lower is better)
Translates to: SNQVAKSTSLLGFPLLQNNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...ATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
3UTR-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTGGAGCTATTCCCATaGCTCTGGGAAGCAAATACC +
Preference number: 3 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLELELFP*LWEANT
Trigger: GGTATTTGCTTCCCAGAGCAATGGGAATAGCTCCAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGGAGCTTCGTATCTATaGCTTTTGCCATTCTCAAAA +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHGASYL*LLPFSK
Trigger: TTTTGAGAATGGCAAAAGCAATAGATACGAAGCTCC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTGCTTACATGCAGTGTaGTTCATTGCAAGTCAAACA +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHCLHAV*FIASQT
Trigger: TGTTTGACTTGCAATGAACAACACTGCATGTAAGCA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAACAGGCAGTAAAGGATaGACCCCTTCAGACCAAGCC +
Preference number: 3 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDETGSKG*TPSDQA
Trigger: GGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTGT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACACAGGCAGTAAAGGATaGACCCCTTCAGACCAAGCC +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDTGSKG*TPSDQA
Trigger: GGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTGT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGGCAGTGGTGGACACTaGAGGAAAGAGAAAGCCAGA +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDGSGGH*RKEKAR
Trigger: TCTGGCTTTCTCTTTCCTCAAGTGTCCACCACTGCC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTCCAATGTGCATGCATaGTTCTCTTCAGGTTTAGGC +
Preference number: 3 (lower is better)
Translates to: AFHGILRCPNLWKLPISCSNVHA*FSSGLG
Trigger: GCCTAAACCTGAAGAGAACAATGCATGCACATTGGA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTTGTGGATCCTATGGTaGCTACTAACTCTTAGGAAA +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHLWILW*LLTLRK
Trigger: TTTCCTAAGAGTTAGTAGCAACCATAGGATCCACAA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATTTCTCACTTAGTGTaGGGGAATTTTGCTTGGCAT +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHISHLV*GNFAWH
Trigger: ATGCCAAGCAAAATTCCCCAACACTAAGTGAGAAAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 72 bp TCATTACCTTACTCTGACCTTTGGAGCTATTCCCATTaGTCTGGGAAGCAAATACCTAGTTTCCCAGAACTT +
Preference number: 3 (lower is better)
Translates to: SLPYSDLWSYSH*SGKQIPSFPEL
Trigger: AAGTTCTGGGAAACTAGGTATTTGCTTCCCAGAGCAATGGGAATAGCTCCAAAGGTCAGAGTAAGGTAATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp AGGAATTACTCTGCATATTCTGGCCAGGAAGGTCCCTaGTGGGGGCTTTTCAATAATTCTATTTCTTATCCT +
Preference number: 3 (lower is better)
Translates to: RNYSAYSGQEGP*WGLFNNSISYP
Trigger: AGGATAAGAAATAGAATTATTGAAAAGCCCCCACCAGGGACCTTCCTGGCCAGAATATGCAGAGTAATTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATATACCTATTGGCATaGTCCCTCAAGAATACTAAG +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHIYLLA*SLKNTK
Trigger: CTTAGTATTCTTGAGGGACAATGCCAATAGGTATAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGGCATTATTTCTTACTaGCATATCAGCAATGTGTCA +
Preference number: 3 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHGIISY*HISNVS
Trigger: TGACACATTGCTGATATGCAAGTAAGAAATAATGCC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTATTTCACAGTGGGCTTaGGGTTGGTATGGCATTTTA +
Preference number: 3 (lower is better)
Translates to: AFHGILRCPNLWKLPISCISQWA*GWYGIL
Trigger: TAAAATGCCATACCAACCCAAAGCCCACTGTGAAAT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTATTTCACAGTGGGCTTaGGGTTGGTATGGCATTTTA +
Preference number: 3 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLISQWA*GWYGIL
Trigger: TAAAATGCCATACCAACCCAAAGCCCACTGTGAAAT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAGCCTGGCACTGGAATaGACCGGGAGATTCTCATTA +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSLALE*TGRFSL
Trigger: TAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGCT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTACACAAATCACCCGTaGCCTAGATTCAGTTTCCAT +
Preference number: 3 (lower is better)
Translates to: AFHGILRCPNLWKLPISCYTNHP*PRFSFH
Trigger: ATGGAAACTGAATCTAGGCAACGGGTGATTTGTGTA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTACACAAATCACCCGTaGCCTAGATTCAGTTTCCAT +
Preference number: 3 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLYTNHP*PRFSFH
Trigger: ATGGAAACTGAATCTAGGCAACGGGTGATTTGTGTA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp CTTGGGTGTTCTTTTGAATGGACTGACATTAGATGCTaGTCCTCACTATCATCTACTTCTAAATACTCCACC +
Preference number: 3 (lower is better)
Translates to: LGCSFEWTDIRC*SSLSSTSKYST
Trigger: GGTGGAGTATTTAGAAGTAGATGATAGTGAGGACCAGCATCTAATGTCAGTCCATTCAAAAGAACACCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR-3UTR CAA 90 bp GGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGGTTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 3 (lower is better)
Translates to: GKQREYVTFNIIVPFCVGYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...ACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATTGGAGCTATTCCCATaGCTCTGGGAAGCAAATACC +
Preference number: 3 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDELELFP*LWEANT
Trigger: GGTATTTGCTTCCCAGAGCAATGGGAATAGCTCCAA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGCCATTCTCAAAACATaGGCAATGTGTTCACTTTCA +
Preference number: 3 (lower is better)
Translates to: AFHGILRCPNLWKLPISCAILKT*AMCSLS
Trigger: TGAAAGTGAACACATTGCCAATGTTTTGAGAATGGC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTGCTTACATGCAGTGTaGTTCATTGCAAGTCAAACA +
Preference number: 3 (lower is better)
Translates to: AFHGILRCPNLWKLPISCCLHAV*FIASQT
Trigger: TGTTTGACTTGCAATGAACAACACTGCATGTAAGCA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAGAGATTTGGGGCTGTaGGATTCAGCAAGGAATGAG +
Preference number: 3 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDERDLGL*DSARNE
Trigger: CTCATTCCTTGCTGAATCCAACAGCCCCAAATCTCT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTATAAGAAAAGAGATTaGGGGCTGTTGGATTCAGCA +
Preference number: 3 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLYKKRD*GLLDSA
Trigger: TGCTGAATCCAACAGCCCCAAATCTCTTTTCTTATA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCAGTGACAGCATTATaGTGCTTGAGCCAAAAAGGA +
Preference number: 3 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESVTAL*CLSQKG
Trigger: TCCTTTTTGGCTCAAGCACAATAATGCTGTCACTGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGGAGCTTCGTATCTATaGCTTTTGCCATTCTCAAAA +
Preference number: 3 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEGASYL*LLPFSK
Trigger: TTTTGAGAATGGCAAAAGCAATAGATACGAAGCTCC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGTGCAATTGAATCATTaGGGGATCTTAGTAAAATGC +
Preference number: 3 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLVQLNH*GILVKC
Trigger: GCATTTTACTAAGATCCCCAAATGATTCAATTGCAC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACACTGAACATTGCTGGTaGGCCCTTAGACCATTTTGT +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDTEHCW*ALRPFC
Trigger: ACAAAATGGTCTAAGGGCCAACCAGCAATGTTCAGT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCACAACAGCTCTGTGTaGATTCAATTAAACAATACG +
Preference number: 3 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLHNSSV*IQLNNT
Trigger: CGTATTGTTTAATTGAATCAACACAGAGCTGTTGTG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 72 bp CCTTTTCTTACACCAGTATTCACCAATCAACATCCATaGGGTGTTTTATTTGACCCACATCCTCTTTCCTTT +
Preference number: 3 (lower is better)
Translates to: PFLTPVFTNQHP*GVLFDPHPLSF
Trigger: AAAGGAAAGAGGATGTGGGTCAAATAAAACACCGCATGGATGTTGATTGGTGAATACTGGTGTAAGAAAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp TGTCATTCACTTCATATTTCACAGTGGGCTTTGGGTTaGTATGGCATTTTACTCCACAAACGGGAACTTTAT +
Preference number: 3 (lower is better)
Translates to: CHSLHISQWALG*YGILLHKRELY
Trigger: ATAAAGTTCCCGTTTGTGGAGTAAAATGCCATACCAACCCAAAGCCCACTGTGAAATATGAAGTGAATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp AATTTTGTCATTCACTTCATATTTCACAGTGGGCTTTaGGTTGGTATGGCATTTTACTCCACAAACGGGAAC +
Preference number: 3 (lower is better)
Translates to: NFVIHFIFHSGL*VGMAFYSTNGN
Trigger: GTTCCCGTTTGTGGAGTAAAATGCCATACCAACCCAAAGCCCACTGTGAAATATGAAGTGAATGACAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp GATTTAGTCTGCATTGGCTTTGAGGGTGACTGTCTTTaGTTAATGTCTCTCAAGGTAGATTATATTCCTTGG +
Preference number: 3 (lower is better)
Translates to: DLVCIGFEGDCL*LMSLKVDYIPW
Trigger: CCAAGGAATATAATCTACCTTGAGAGACATTAACCAAAGACAGTCACCCTCAAAGCCAATGCAGACTAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGGCATTATTTCTTACTaGCATATCAGCAATGTGTCA +
Preference number: 3 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEGIISY*HISNVS
Trigger: TGACACATTGCTGATATGCAAGTAAGAAATAATGCC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGCAAGTCAAACAGACTaGATCTGTCCTTTCCAAAAG +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDASQTD*ICPFQK
Trigger: CTTTTGGAAAGGACAGATCAAGTCTGTTTGACTTGC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCATGTATCCTTCCATTaGAACAGCTGTCTCCTTGAT +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDHVSFH*NSCLLD
Trigger: ATCAAGGAGACAGCTGTTCAAATGGAAGGATACATG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATCAGTGACAGCATTATaGTGCTTGAGCCAAAAAGGA +
Preference number: 3 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDESVTAL*CLSQKG
Trigger: TCCTTTTTGGCTCAAGCACAATAATGCTGTCACTGA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTTTTTCTCTGAAGCGTaGTCACACAATCTCATGTGC +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDFFSEA*SHNLMC
Trigger: GCACATGAGATTGTGTGACAACGCTTCAGAGAAAAA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCATCTTCAACTTGGCCTaGGATATCTGTGTGACTGAT +
Preference number: 3 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAIFNLA*DICVTD
Trigger: ATCAGTCACACAGATATCCAAGGCCAAGTTGAAGAT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACATCTTCAACTTGGCCTaGGATATCTGTGTGACTGAT +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDIFNLA*DICVTD
Trigger: ATCAGTCACACAGATATCCAAGGCCAAGTTGAAGAT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAACTCAGACTACATTTaGAGGTTTATCCAAGTGAAG +
Preference number: 3 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLENSDYI*RFIQVK
Trigger: CTTCACTTGGATAAACCTCAAAATGTAGTCTGAGTT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGAGGTAGTGGTAGCTTaGAAAATGTGGAACCTTATG +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDEVVVA*KMWNLM
Trigger: CATAAGGTTCCACATTTTCAAAGCTACCACTACCTC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAGGAAACATAATGATTaGTTCTGGAATCAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYARKHND*FWNQLL
Trigger: CAGCAGCTGATTCCAGAACAAATCATTATGTTTCCT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAGGAAACATAATGATTaGTTCTGGAATCAGCTGCTG +
Preference number: 3 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDERKHND*FWNQLL
Trigger: CAGCAGCTGATTCCAGAACAAATCATTATGTTTCCT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGCCTCTGCCAAGATTTaGCAATTGAATTTACTTCAG +
Preference number: 3 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEASAKI*QLNLLQ
Trigger: CTGAAGTAAATTCAATTGCAAAATCTTGGCAGAGGC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGCCTCTGCCAAGATTTaGCAATTGAATTTACTTCAG +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDASAKI*QLNLLQ
Trigger: CTGAAGTAAATTCAATTGCAAAATCTTGGCAGAGGC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGCCATTCTCAAAACATaGGCAATGTGTTCACTTTCA +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDAILKT*AMCSLS
Trigger: TGAAAGTGAACACATTGCCAATGTTTTGAGAATGGC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTATAAGAAAAGAGATTaGGGGCTGTTGGATTCAGCA +
Preference number: 3 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAYKKRD*GLLDSA
Trigger: TGCTGAATCCAACAGCCCCAAATCTCTTTTCTTATA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACATCATTATCATGGCTTaGGACAACTATGAGGTGACT +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDIIIMA*DNYEVT
Trigger: AGTCACCTCATAGTTGTCCAAAGCCATGATAATGAT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 72 bp TGTTGCCTTTGTGAACACCGCAAGTCTTCCTTGACTTaGGATTTTTCTTGGTCTGTAAGATTTGAGATTTTT +
Preference number: 3 (lower is better)
Translates to: CCLCEHRKSSLT*DFSWSVRFEIF
Trigger: AAAAATCTCAAATCTTACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGTGTTCACAAAGGCAACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
3UTR GCA 72 bp TGTATGTACAGTAAGGCAGTAATTCCATTAGCATCCTaGTGTGGTTTTCTTTTCAAGTTAGTCTTTAGGGAA +
Preference number: 3 (lower is better)
Translates to: CMYSKAVIPLAS*CGFLFKLVFRE
Trigger: TTCCCTAAAGACTAACTTGAAAAGAAAACCACAGCAGGATGCTAATGGAATTACTGCCTTACTGTACATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR GCA 72 bp CAAGGTAGATTATATTCCTTGGCCTTTCAGAAGTTGTaGGTAGTTTTGCAGGTCATTCTTTTATGTGAATTC +
Preference number: 3 (lower is better)
Translates to: QGRLYSLAFQKL*VVLQVILLCEF
Trigger: GAATTCACATAAAAGAATGACCTGCAAAACTACGCACAACTTCTGAAAGGCCAAGGAATATAATCTACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGTGCAATTGAATCATTaGGGGATCTTAGTAAAATGC +
Preference number: 3 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAVQLNH*GILVKC
Trigger: GCATTTTACTAAGATCCCCAAATGATTCAATTGCAC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAACTTCAGTGTGCAATaGAATCATTTGGGGATCTTA +
Preference number: 3 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYANFSVQ*NHLGIL
Trigger: TAAGATCCCCAAATGATTCAATTGCACACTGAAGTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAAGTTGTGCGTAGTTTaGCAGGTCATTCTTTTATGT +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDKLCVV*QVILLC
Trigger: ACATAAAAGAATGACCTGCAAAACTACGCACAACTT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAAGTTGTGCGTAGTTTaGCAGGTCATTCTTTTATGT +
Preference number: 3 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAKLCVV*QVILLC
Trigger: ACATAAAAGAATGACCTGCAAAACTACGCACAACTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGTTAAAGTGAGTCTTTaGTACTTAAGTGACTACCAG +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDVKVSL*YLSDYQ
Trigger: CTGGTAGTCACTTAAGTACAAAAGACTCACTTTAAC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGTTAAAGTGAGTCTTTaGTACTTAAGTGACTACCAG +
Preference number: 3 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEVKVSL*YLSDYQ
Trigger: CTGGTAGTCACTTAAGTACAAAAGACTCACTTTAAC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCACAACAGCTCTGTGTaGATTCAATTAAACAATACG +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDHNSSV*IQLNNT
Trigger: CGTATTGTTTAATTGAATCAACACAGAGCTGTTGTG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAACTCAGACTACATTTaGAGGTTTATCCAAGTGAAG +
Preference number: 3 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYANSDYI*RFIQVK
Trigger: CTTCACTTGGATAAACCTCAAAATGTAGTCTGAGTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAATAAGCTTCTCTTATaGGATCTCCTTGTATCTGGT +
Preference number: 3 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDNKLLL*DLLVSG
Trigger: ACCAGATACAAGGAGATCCAATAAGAGAAGCTTATT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR TCA 72 bp GCTGATATAACTTGTGCTTATACACATCTGTTAGAATaGATTGGAACATCTTGCTGTTCAGGTTGTAAGCTA +
Preference number: 3 (lower is better)
Translates to: ADITCAYTHLLE*IGTSCCSGCKL
Trigger: TAGCTTACAACCTGAACAGCAAGATGTTCCAATTCATTCTAACAGATGTGTATAAGCACAAGTTATATCAGC
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp GACTTTCGTCAATGGCACATCTACGTTAGCAATGCTTaGGATGGTAATTCAAAGTCATTTATATTTTTCTGT +
Preference number: 3 (lower is better)
Translates to: DFRQWHIYVSNA*DGNSKSFIFFC
Trigger: ACAGAAAAATATAAATGACTTTGAATTACCATCCCAAGCATTGCTAACGTAGATGTGCCATTGACGAAAGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CCA 72 bp AGAGGAAAAGCAGAGGTAGTGGTAGCTTTGAAAATGTaGAACCTTATGCTATTATGTATAACTTCACTTCAA +
Preference number: 3 (lower is better)
Translates to: RGKAEVVVALKM*NLMLLCITSLQ
Trigger: TTGAAGTGAAGTTATACATAATAGCATAAGGTTCCACATTTTCAAAGCTACCACTACCTCTGCTTTTCCTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GGGCAGCAGCCAGGGCGTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTACCTCAGTGGCCGGTGCACCTaGAGGGCCCACAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: GQQPGRILVSLRMEAFYLSGRCT*RAHSQL
Trigger: GAGCTGGCTGTGGGCCCTGCAGGTGCACCGGCCACT...GAGGTAGAAAGCTTCCATTCTGAGACTGACCAGGATACGCCCTGGCTGCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp TCTCAGGAGTCCCGGGCTTCTTGGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTACAACAGAGTGGCCGGTaGACCTGCAGGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: SQESRASWACRCSLSVLVQQSGR*TCRAHS
Trigger: GCTGTGGGCCCTGCAGGTGCACCGGCCACTCTGTTG...TACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGACAAAAGGGAAGGGCTGTCACAGCTCCCCCGGCCTGAGTCAGTGTCAGGATGTGGAGGGATTGGCCTaGGGTTCCTCACACTTTTCA +
Preference number: 4 (lower is better)
Translates to: QTKGKGCHSSPGLSQCQDVEGLA*GSSHFS
Trigger: TGAAAAGTGTGAGGAACCCCAGGCCAATCCCTCCAC...ATCCTGACACTGACTCAGGCCGGGGGAGCTGTGACAGCCCTTCCCTTTTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp GGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCACAGCTCCCCCGGCCTaGGTCAGTGTCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GLQRTWTRYFCPGCRLRITAPPA*VSVRIQ
Trigger: CTGGATCCTGACACTGACTCAGGCCGGGGGAGCTGT...GATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCACAGCTCCCCCGGCCTaGGTCAGTGTCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLTAPPA*VSVRIQ
Trigger: CTGGATCCTGACACTGACTCAGGCCGGGGGAGCTGT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCTCAGGAGTCCCGGGCTTCTTGGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTACACCCAGCTGGAGCCTaGACTTGCTTGATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SQESRASWACRCSLSVLVHPAGA*TCLMLQ
Trigger: CTGCAACATCAAGCAAGTGCAGGCTCCAGCTGGGTG...TACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAGTGGCCGGTGCACCTaGAGGGCCCACAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHSGRCT*RAHSQL
Trigger: GAGCTGGCTGTGGGCCCTGCAGGTGCACCGGCCACT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGACAAAAGGGAAGGGCTGTCACAGCTCCCCCGGCCTGAGTCAGTGTCAGGATCAGGATCATAGAATGTaGAGGGATTGGCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QTKGKGCHSSPGLSQCQDQDHRM*RDWPGV
Trigger: AACCCCAGGCCAATCCCTCCACATTCTATGATCCTG...ATCCTGACACTGACTCAGGCCGGGGGAGCTGTGACAGCCCTTCCCTTTTGTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTCTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSLDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 4 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 4 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CCTTGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTGGGCTTGCCGCTCCTGCACGAGGACATaGAGCTCCATTGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: PWHTPYCSQESRASWACRSCTRT*SSIVWK
Trigger: TTTCCACACAATGGAGCTTCATGTCCTCGTGCAGGA...GCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTTGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: RWTPCTPVSMVWFAANLDIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 4 (lower is better)
Translates to: PTASEWGTTCFTWQCLRGDCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...CCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTGAGTCCCGGGCTTCTTaGGCTTGCCGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: ALQYPWSGLQRTWTRYFCESRAS*ACRCSL
Trigger: GAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTC...ACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp GTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGGATCTGGGGTTGTGCTaGCTGGGCTGTGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: VSMVWFAANLDKVFLSWMDLGLC*LGCGKG
Trigger: GCCCTTACCACAGCCCAGCCAGCACAACCCCAGATC...CATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp GTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: VNSALGAVGSDHMSWLVTASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...CGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTCTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSLDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 4 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 4 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 4 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACATGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATTCACCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNSPLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGGTGA...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000348262.7
ENST00000397391.7
ENST00000514088.5
CDS-3UTR GCA 90 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCTGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SRFPTASEWGTTCFTWQCWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...GCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGTGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPVNSALGAVGSDHMSWLWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...CAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VTKLIATRGSRDWGWVDIHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: PGCEEYISSRFPTASEWGGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAGACAAAAGGGAAGGGCTGTCACAGCTCCCCCGGCCTGAGTCAGTGTCAGGATGTAGTTCTTCAGACTTaGCCTTCTCCAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: QTKGKGCHSSPGLSQCQDVVLQT*PSPTDE
Trigger: CTCATCTGTTGGAGAAGGGCAAGTCTGAAGAACTAC...ATCCTGACACTGACTCAGGCCGGGGGAGCTGTGACAGCCCTTCCCTTTTGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QLPVNSALGAVGSDHMSWWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...CCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: PFCVGFQLPVNSALGAVGSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...CCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAAGTGGCCGGTGCACCTaGAGGGCCCACAGCCAGCTC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSGRCT*RAHSQL
Trigger: GAGCTGGCTGTGGGCCCTGCAGGTGCACCGGCCACT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: PTASEWGTTCFTWQCLRGKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...CCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CCTGGGGCAGCAGCCAGGGCGTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTAGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PGAAARAYPGQSQNGSFLGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...TAGAAAGCTTCCATTCTGAGACTGACCAGGATACGCCCTGGCTGCTGCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACACTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCGTGGGAGGAAAGTCTTaGCATCCCAAGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: VTKLIATRGSRDWGWVDIVGGKS*HPKALS
Trigger: ACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCAC...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CCA 90 bp GGGCAGCAGCCAGGGCGTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTACCTCCCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: GQQPGRILVSLRMEAFYLPHSQK*EESLGI
Trigger: GATGCCAAGACTTTCCTCCCACTTCTGACTATGAGG...GAGGTAGAAAGCTTCCATTCTGAGACTGACCAGGATACGCCCTGGCTGCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp CCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: PFCVGFQLPVNSALGAVGAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...CCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATGAAGGTCGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: MKVAGLHALQYPWSGLQRAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...TCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: LPVNSALGAVGSDHMSWLPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...CAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: PFCVGFQLPVNSALGAVGPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...CCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGGAGTCCCGGGCTTCTTaGGCTTGCCGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DSSKQATFLACGSGTNTRESRAS*ACRCSL
Trigger: GAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTC...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp AGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCAGAGTCCCGGGCTTCTTaGGCTTGCCGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SDGGASLADSSKQATFLAESRAS*ACRCSL
Trigger: GAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTC...TGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp CCTGGGGCAGCAGCCAGGGCGTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTAATGGTGGGGCCTCTTTaGCTGATTCTTCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: PGAAARAYPGQSQNGSFLMVGPL*LILQSK
Trigger: CTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCAT...TAGAAAGCTTCCATTCTGAGACTGACCAGGATACGCCCTGGCTGCTGCCCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CAA 72 bp GCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGA +
Preference number: 4 (lower is better)
Translates to: AGLHALQYPWSG*QRTWTRYFCPG
Trigger: TCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
3UTR CAA 72 bp GCATACTCCTTATTGTTCTCAGGAGTCCCGGGCTTCTaGGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTAGC +
Preference number: 4 (lower is better)
Translates to: AYSLLFSGVPGF*GLPLFSLCFGS
Trigger: GCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGAGTATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CAA 72 bp AACACCAGGATGTTGTTATCCATGACCCCGGACACCTaGGCATACTCCTTATTGTTCTCAGGAGTCCCGGGC +
Preference number: 4 (lower is better)
Translates to: NTRMLLSMTPDT*AYSLLFSGVPG
Trigger: GCCCGGGACTCCTGAGAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCATGGATAACAACATCCTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCCTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPLDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp CCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PTASEWGTTCFTWQCLRGTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...CCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ATGAAGGTCGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGATGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: MKVAGLHALQYPWSGLQRCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...TCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR TCA 90 bp CTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: LPVNSALGAVGSDHMSWLCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...CAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGTCACCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: QLPVNSALGAVGSDHMSWSPLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGGTGA...CCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348262.7
ENST00000397391.7
ENST00000514088.5
CDS-3UTR GCA 90 bp TTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FCVGFQLPVNSALGAVGSHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...ACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGTGAAGTCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATGCACTCCAGTAGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: GEVTRYLNEGRWTPCTPVGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGACTTCACC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: VNSALGAVGSDHMSWLVTELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...CGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: GTTCFTWQCLRGTVTKLIELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...AATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: IATRGSRDWGWVDIINLGSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PTASEWGTTCFTWQCLRGKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...CCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCACCCAGCTGGAGCCTaGACTTGCTTGATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLHPAGA*TCLMLQ
Trigger: CTGCAACATCAAGCAAGTGCAGGCTCCAGCTGGGTG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTGAAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGTGCCTTCCATGCTTATaGACTGGGGGTCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: VKGVCKTCGIQVIQTTQLCLPCL*TGGPRC
Trigger: ACACCTGGGACCCCCAGTGCATAAGCATGGAAGGCA...CAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGCGGGCTTCTTGGGCTTaGCGCTGTTCTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLERASWA*RCSLSV
Trigger: AACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCG...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCGGGCTTCTTGGGCTTaGCGCTGTTCTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLRASWA*RCSLSV
Trigger: AACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGCAAAGTGGCAGGAGTTaGGGCCACCGGTTATGTAGT +
Preference number: 4 (lower is better)
Translates to: PGCEEYISSRFPTASEWGQSGRS*GHRLCS
Trigger: ACTACATAACCGGTGGCCCCAACTCCTGCCACTTTG...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: GCEEYISSRFPTASEWGTPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: LPVNSALGAVGSDHMSWLLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...CAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTACCTCCCTCTGCTGGGTTGCCCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VSWSVSEWKLSTSLCWVALNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...GGCAACCCAGCAGAGGGAGGTAGAAAGCTTCCATTCTGAGACTGACCAGGATAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCACTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: VTKLIATRGSRDWGWVDIALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: SRFPTASEWGTTCFTWQCALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...GCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: GCEEYISSRFPTASEWGTAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LGFPLLQNGGPRALHGSALSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGAGTCCCGGGCTTCTTaGGCTTGCCGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHESRAS*ACRCSL
Trigger: GAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGTGGGGGTCCCAGGTGTaGGTTGTTTCAGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: WSGLQRTWTRYFCPGCRLWGSQV*VVSGFS
Trigger: AGAGAATCCTGAAACAACCCACACCTGGGACCCCCA...CAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACTGGGGTTGTGCTGGCTaGGCTGTGGTAAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LADSSKQATFLACGSGTNWGCAG*AVVRAM
Trigger: CATGGCCCTTACCACAGCCCAGCCAGCACAACCCCA...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTGTGGTAAGAGGATCTaGGGTTGTGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRCGKRI*GCAGWA
Trigger: AGCCCAGCCAGCACAACCCCAGATCCTCTTACCACA...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCCTTCATTCAACAGAGTaGCCGGTGCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSLHSTE*PVHLQG
Trigger: GCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAG...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAAGGGGGTTTTCTCCTaGGGCAGCAGCCAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHKGVFS*GSSQGV
Trigger: TACGCCCTGGCTGCTGCCCCAGGAGAAAACCCCCTT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGCATCTTTACCTGCTTCATTCAACAGAGTGGCCGGTGCACCTGCAGGGCCCGAAAAAGTAGCAGAGTaGAAACGGTTGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: KASLPASFNRVAGAPAGPEKVAE*KRLQMP
Trigger: TGGCATCTGCAACCGTTTTCACTCTGCTACTTTTTC...GGGCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAGCAGGTAAAGATGCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp TCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: SALLDCGQCCLCEHRKSSASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...GGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509140.5
ENST00000513753.5
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACATCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTSMLPL*TPQVFL
Trigger: AAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGA...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACTCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDSMLPL*TPQVFL
Trigger: AAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGA...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGTCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKSMLPL*TPQVFL
Trigger: AAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGA...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGTGTAAGGGAGACAACTaGCTTGGCCACATCCTTCAC +
Preference number: 4 (lower is better)
Translates to: WSGLQRTWTRYFCPGCRLCKGDN*LGHILH
Trigger: GTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACA...CAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR TCA 90 bp CACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCTGCCACATCAGTCGATaGGTACTTCCTGCACGAGGA +
Preference number: 4 (lower is better)
Translates to: HSSIHGLVCSEPGQGISVCHISR*VLPARG
Trigger: TCCTCGTGCAGGAAGTACTCATCGACTGATGTGGCA...GACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTACAGCTCCCCCGGCCTaGGTCAGTGTCAGGATCCAG +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCTAPPA*VSVRIQ
Trigger: CTGGATCCTGACACTGACTCAGGCCGGGGGAGCTGT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GGGCAGCAGCCAGGGCGTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTACCTCATGCACCATCTTTGTTaGCCTTGTGAATCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GQQPGRILVSLRMEAFYLMHHLC*PCESPH
Trigger: ATGTGGAGATTCACAAGGTCAACAAAGATGGTGCAT...GAGGTAGAAAGCTTCCATTCTGAGACTGACCAGGATACGCCCTGGCTGCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp CAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTTGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QLYWTVVNVAFVNTASLPWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...AGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: QLYWTVVNVAFVNTASLPHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...AGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: PTASEWGTTCFTWQCLRGILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...CCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCGTAGTTCTTCAGACTTaGCCTTCTCCAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAVVLQT*PSPTDE
Trigger: CTCATCTGTTGGAGAAGGGCAAGTCTGAAGAACTAC...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR GCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 4 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPDCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ATGAAGGTCGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 4 (lower is better)
Translates to: MKVAGLHALQYPWSGLQRDCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...TCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR GCA 90 bp CTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 4 (lower is better)
Translates to: LPVNSALGAVGSDHMSWLDCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...CAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRDCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 4 (lower is better)
Translates to: QLPVNSALGAVGSDHMSWDCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...CCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFSISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CTTCCCATCTGGTTAGTGGCATTGACCATCATGATGTATGTCCTCCACATGGAGGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: LPIWLVALTIMMYVLHMEAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...CTCCATGTGGAGGACATACATCATGATGGTCAATGCCACTAACCAGATGGGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR GCA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGTTATCCACCCAGCTGGAGCCTaGACTTGCTTGATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: ASHVFSMWIWHQHQDVVIHPAGA*TCLMLQ
Trigger: CTGCAACATCAAGCAAGTGCAGGCTCCAGCTGGGTG...GATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATGCTGCCTTCTCTTGCTaGAGGAAATGTATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNAAFSC*RKCIRS
Trigger: ACTTCTGATACATTTCCTGCAGCAAGAGAAGGCAGC...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR GCA 90 bp GCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTGGATTTTGCCTTCCATaGTTATGCACTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: ALQYPWSGLQRTWTRYFCGFCLP*LCTGGP
Trigger: GGGACCCCCAGTGCATAAGCATGGAAGGCAAAATCC...ACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACAACAGAGTGGCCGGTaGACCTGCAGGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEQQSGR*TCRAHS
Trigger: GCTGTGGGCCCTGCAGGTGCACCGGCCACTCTGTTG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTTTCTACCTCCCTCTaGTGGGTTGCCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HSSIHGLVCSEPGQGISVLSTSL*WVAFPS
Trigger: AGAGGGAAAGGCAACCCAGCAGAGGGAGGTAGAAAG...GACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTCAGCAAGGCTTTCTTaGACTGCACCAGGGACACTG +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLSARLS*TAPGTL
Trigger: CAGTGTCCCTGGTGCAGTGCAAGAAAGCCTTGCTGA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTCACCCAGGCTGGAGTaGAGTGACACAATCACGGTT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLSPRLE*SDTITV
Trigger: AACCGTGATTGTGTCACTGCACTCCAGCCTGGGTGA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTGAAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGCAAAGTGGCAGGAGTTaGGGCCACCGGTTATGTAGT +
Preference number: 4 (lower is better)
Translates to: VKGVCKTCGIQVIQTTQLQSGRS*GHRLCS
Trigger: ACTACATAACCGGTGGCCCCAACTCCTGCCACTTTG...CAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGTGAAGTCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATGCACTCCAGTACCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: GEVTRYLNEGRWTPCTPVPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGACTTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGGTGGGAGGAAAGTCTTaGCATCCCAAGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEVGGKS*HPKALS
Trigger: ACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCAC...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp GGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCGTGGGAGGAAAGTCTTaGCATCCCAAGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: GLQRTWTRYFCPGCRLRIVGGKS*HPKALS
Trigger: ACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCAC...GATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp CTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGCCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: LPVNSALGAVGSDHMSWLPHSQK*EESLGI
Trigger: GATGCCAAGACTTTCCTCCCACTTCTGACTATGAGG...CAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCCTTTTATTTTTGGCCCAGGAACTGGCGGAAAGATGCAGGTCACCATGCTATACACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SFYFWPRNWRKDAGHHAIHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...TATAGCATGGTGACCTGCATCTTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VSMVWFAANLDKVFLSWMSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...CATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGGTCACCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATGCACTCCAGTATTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GVTTRYLNEGRWTPCTPVLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGGTGACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397391.7
CDS-3UTR CCA 90 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: SRFPTASEWGTTCFTWQCLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...GCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: VNSALGAVGSDHMSWLVTGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...CGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 4 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTCCAAACCACCCAGCTaGAGCCTGCACTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRSKPPS*SLHLLD
Trigger: ATCAAGCAAGTGCAGGCTCCAGCTGGGTGGTTTGGA...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp GCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTAGCCAGGGCGTATCCTaGTCAGTCTCAGAATGGAAG +
Preference number: 4 (lower is better)
Translates to: ALQYPWSGLQRTWTRYFCSQGVS*SVSEWK
Trigger: CTTCCATTCTGAGACTGACCAGGATACGCCCTGGCT...ACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCGAAAAAGTAGCAGAGTaGAAACGGTTGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: SRFPTASEWGTTCFTWQCEKVAE*KRLQMP
Trigger: TGGCATCTGCAACCGTTTTCACTCTGCTACTTTTTC...GCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCAGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGCCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGLDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp CGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: RWTPCTPVSMVWFAANLDFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR TCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCATCAAGGGGTCACCTTaGCTTGGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SRFPTASEWGTTCFTWQCIKGSP*LGCSFE
Trigger: TTCAAAAGAACACCCAAGTCAAGGTGACCCCTTGAT...GCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR TCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAATCAAGGGGTCACCTTaGCTTGGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPIKGSP*LGCSFE
Trigger: TTCAAAAGAACACCCAAGTCAAGGTGACCCCTTGAT...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR TCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCTCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCSMLPL*TPQVFL
Trigger: AAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGA...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 4 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCAGTAATCCAAGTCAGTaGGGCCAGTGGACACACAGC +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFSNPSQ*GQWTHS
Trigger: GCTGTGTGTCCACTGGCCTCACTGACTTGGATTACT...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp AGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCAGAGCCTGCACTTGCTTaGTGTTGCAGTGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: SDGGASLADSSKQATFLAEPALA*CCSEVG
Trigger: GCCAACTTCACTGCAACATCAAGCAAGTGCAGGCTC...TGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCGAGCCTGCACTTGCTTaGTGTTGCAGTGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSEPALA*CCSEVG
Trigger: GCCAACTTCACTGCAACATCAAGCAAGTGCAGGCTC...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp GCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGTTATCGAGCCTGCACTTGCTTaGTGTTGCAGTGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: ASHVFSMWIWHQHQDVVIEPALA*CCSEVG
Trigger: GCCAACTTCACTGCAACATCAAGCAAGTGCAGGCTC...GATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGATCACCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGSPLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGGTGA...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000348262.7
ENST00000397391.7
ENST00000514088.5
CDS-3UTR GCA 90 bp CGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACGAAAACGGTTGCAGATaGCACATTTTCCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: RWTPCTPVSMVWFAANLDENGCR*HIFLHV
Trigger: AACATGAAGGAAAATGTGGCATCTGCAACCGTTTTC...GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTTGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: GASLADSSKQATFLACGSWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...AGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR GCA 90 bp GTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VRETTDLATSFTNTCITTHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...GGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: IATRGSRDWGWVDIINLGIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SNQVAKSTSLLGFPLLQNGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...ATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGTGAAGTCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATGCACTCCAGTAGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: GEVTRYLNEGRWTPCTPVELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGACTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACCTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: FRMGDHVLYMAVPKGDSDLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...GTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QPGCEEYISSRFPTASEWWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VRETTDLATSFTNTCITTWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...GGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCAGCTGGCTGGTCACGTaGTGCAGGAGTAATCCAAGT +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFSWLVT*CRSNPS
Trigger: ACTTGGATTACTCCTGCAGCACGTGACCAGCCAGCT...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: DWGWVDIINLGSPCKGDNEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...GTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAACACCCAGCTGGAGCCTaGACTTGCTTGATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQHPAGA*TCLMLQ
Trigger: CTGCAACATCAAGCAAGTGCAGGCTCCAGCTGGGTG...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCGGGCTTCTTGGGCTTaGCGCTGTTCTCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHRASWA*RCSLSV
Trigger: AACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAACTGCAACTTGGAATaGAGGGACCTCTGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLNCNLE*RDLWLL
Trigger: GAGCAACCAGAGGTCCCTGCATTCCAAGTTGCAGTT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCATCTCATGTGCTCACTaGTTCAGGCCAAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLISCAH*FRPRVC
Trigger: ACACACCCTTGGCCTGAAGCAGTGAGCACATGAGAT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACACAAAGTGGCAGGAGTTaGGGCCACCGGTTATGTAGT +
Preference number: 4 (lower is better)
Translates to: PVRETTDLATSFTNTCITQSGRS*GHRLCS
Trigger: ACTACATAACCGGTGGCCCCAACTCCTGCCACTTTG...TGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: FCVGFQLPVNSALGAVGSLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...ACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: QLPVNSALGAVGSDHMSWGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...CCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: QLPVNSALGAVGSDHMSWVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...CCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTTCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LQLYWTVVNVAFVNTASLCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...AAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGTTATCTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ASHVFSMWIWHQHQDVVICCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...GATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp CCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACACCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: PVRETTDLATSFTNTCITPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...TGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: DSSKQATFLACGSGTNTRPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: SALLDCGQCCLCEHRKSSLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...GGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ALQYPWSGLQRTWTRYFCLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...ACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGCCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTPHSQK*EESLGI
Trigger: GATGCCAAGACTTTCCTCCCACTTCTGACTATGAGG...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CCA 90 bp GTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: VSMVWFAANLDKVFLSWMALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...CATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCGCACAGTCTGTCCTGTaGTTGGACAGAGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFAQSVL*LDRGEK
Trigger: TTTCTCCCCTCTGTCCAACCACAGGACAGACTGTGC...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATACACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: DLATSFTNTCITTFYSKCHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PVRETTDLATSFTNTCITSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...TGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 4 (lower is better)
Translates to: VRETTDLATSFTNTCITTRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...GGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: QPGCEEYISSRFPTASEWTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCATCCAAACCACCCAGCTaGAGCCTGCACTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPSKPPS*SLHLLD
Trigger: ATCAAGCAAGTGCAGGCTCCAGCTGGGTGGTTTGGA...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp GTATCCTGGTCAGTCTCAGAATGGAAGCTTTCTACCTCCCTCTGCTGGGTTGCCCAGGATCCAGGTATGTaGGTTTCATACCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: VSWSVSEWKLSTSLCWVAQDPGM*VSYLDL
Trigger: CAAGTCAAGGTATGAAACCCACATACCTGGATCCTG...GGCAACCCAGCAGAGGGAGGTAGAAAGCTTCCATTCTGAGACTGACCAGGATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCAGGATCATAGAATGTaGAGGGATTGGCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLQDHRM*RDWPGV
Trigger: AACCCCAGGCCAATCCCTCCACATTCTATGATCCTG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGTCACCATGCTATAGCCCTTCAAAGCCACTGCCCAGACAATAATCAAACAGATTCCATGCTTATGCACTaGGGGTCCCAGGTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GHHAIALQSHCPDNNQTDSMLMH*GSQVWV
Trigger: AACCCACACCTGGGACCCCCAGTGCATAAGCATGGA...ATCTGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGCTATAGCATGGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGATCTGGGGTTGTGCTaGCTGGGCTGTGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLDLGLC*LGCGKG
Trigger: GCCCTTACCACAGCCCAGCCAGCACAACCCCAGATC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTAAGGGGGTTTTCTCCTaGGGCAGCAGCCAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLKGVFS*GSSQGV
Trigger: TACGCCCTGGCTGCTGCCCCAGGAGAAAACCCCCTT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp TTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTaGTTATCCATGACCCCGGACACCTTGGCATACTCC +
Preference number: 4 (lower is better)
Translates to: FLACGSGTNTRM*LSMTPDTLAYS
Trigger: GGAGTATGCCAAGGTGTCCGGGGTCATGGATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
3UTR CAA 72 bp TCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTGGGCTaGCCGCTGTTCTCTCTCTGTTTTGGTAGCAATGAT +
Preference number: 4 (lower is better)
Translates to: SLLFSGVPGFLG*PLFSLCFGSND
Trigger: ATCATTGCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGCCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PGCEEYISSRFPTASEWGPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp TTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTCCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: FCVGFQLPVNSALGAVGSPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...ACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGCTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: QPGCEEYISSRFPTASEWLDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPLDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCCCCTTCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAPFSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGAAGGG...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR GCA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR GCA 90 bp CCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PFCVGFQLPVNSALGAVGLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...CCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: QLPVNSALGAVGSDHMSWLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...CCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: GDHVLYMAVPKGDSDKADILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...ATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: GASLADSSKQATFLACGSIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...AGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: DSSKQATFLACGSGTNTRELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGCTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCCTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAAGCATCTCCCTGGGGTaGACAGTCTGTCCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPISISLG*TVCPVV
Trigger: AACCACAGGACAGACTGTGCACCCCAGGGAGATGCT...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGTCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VTKLIATRGSRDWGWVDIKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACAACAGAGTGGCCGGTaGACCTGCAGGGCCCACAGC +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEQQSGR*TCRAHS
Trigger: GCTGTGGGCCCTGCAGGTGCACCGGCCACTCTGTTG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCGCAGGGACCTCTGGTTaGTCAATAACTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLAGTSG*SITHRL
Trigger: AAGCCTATGAGTTATTGAGCAACCAGAGGTCCCTGC...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: PGCEEYISSRFPTASEWGKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PGCEEYISSRFPTASEWGGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
49% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp AGGAGGGTCTGGCTGAACTATGTAAGTCACGTCCACATAAAGTTCATCCGAGAATGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RRVWLNYVSHVHIKFIRECCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...TTCTCGGATGAACTTTATGTGGACGTGACTTACATAGTTCAGCCAGACCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CCA 90 bp TCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGTGGGAGGAAAGTCTTaGCATCCCAAGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: SNQVAKSTSLLGFPLLQNVGGKS*HPKALS
Trigger: ACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCAC...ATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGTGGGAGGAAAGTCTTaGCATCCCAAGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHVGGKS*HPKALS
Trigger: ACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCAC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCGTGGGAGGAAAGTCTTaGCATCCCAAGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTVGGKS*HPKALS
Trigger: ACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCAC...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: ISLILGHPVRETTDLATSSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: IATRGSRDWGWVDIINLGLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: IATRGSRDWGWVDIINLGGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 4 (lower is better)
Translates to: GTTCFTWQCLRGTVTKLISRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...AATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATTGACCATCATGATGTATGTCCTCCACATGGAGGTGTACTGCTTGCCAAAGTGAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 4 (lower is better)
Translates to: IDHHDVCPPHGGVLLAKVRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...CACTTTGGCAAGCAGTACACCTCCATGTGGAGGACATACATCATGATGGTCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CCA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 4 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGTCACCATGCTATAGCCCTTCAAAGCCACTGCCCAGACAATAATCAAACAGATAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 4 (lower is better)
Translates to: GHHAIALQSHCPDNNQTDRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...ATCTGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGCTATAGCATGGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618625.4
CDS-3UTR CCA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: ISLILGHPVRETTDLATSPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTCACGTTTTTAGCATGTaGATCTGGCACCAACACCAG +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRHVFSM*IWHQHQ
Trigger: CTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTG...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTACTTCAGGGTTCATGTaGAAAGCATCCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: FCVGFQLPVNSALGAVGSTSGFM*KASSVF
Trigger: GAACACTGAGGATGCTTTCCACATGAACCCTGAAGT...ACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CCA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGTGCTGCCCAGCAAAATaGATCATTCAGAAGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLECCPAK*IIQKAG
Trigger: ACCTGCCTTCTGAATGATCCATTTTGCTGGGCAGCA...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATGGGGTTGTGCTGGCTaGGCTGTGGTAAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEWGCAG*AVVRAM
Trigger: CATGGCCCTTACCACAGCCCAGCCAGCACAACCCCA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCTTCATTCAACAGAGTaGCCGGTGCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCLHSTE*PVHLQG
Trigger: GCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGAGATCCACACGGTTGTATCATTCATGGTGAAGTCACTAGGTATCTGAATGAAAAGGGGGTTTTCTCCTaGGGCAGCAGCCAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: RDPHGCIIHGEVTRYLNEKGVFS*GSSQGV
Trigger: TACGCCCTGGCTGCTGCCCCAGGAGAAAACCCCCTT...TTCATTCAGATACCTAGTGACTTCACCATGAATGATACAACCGTGTGGATCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTCTGGAATCAGCTGCTaGAGAAAGAGGCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRSGISC*RKRQVV
Trigger: AACCACTTGCCTCTTTCTCCAGCAGCTGATTCCAGA...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CAA 72 bp GAGAAAGCCAGAGTTTCCCCAGAGCTAAACTGCAACTaGGAATGCAGGGACCTCTGGTTGCTCAATAACTCA +
Preference number: 4 (lower is better)
Translates to: EKARVSPELNCN*ECRDLWLLNNS
Trigger: TGAGTTATTGAGCAACCAGAGGTCCCTGCATTCCAAGTTGCAGTTTAGCTCTGGGGAAACTCTGGCTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGGAAAAAGTAGCAGAGTaGAAACGGTTGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: IATRGSRDWGWVDIINLGEKVAE*KRLQMP
Trigger: TGGCATCTGCAACCGTTTTCACTCTGCTACTTTTTC...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CATCATGATGTATGTCCTCCACATGGAGGTGTACTGCTTGCCAAAGTGGCAGGAGAAAAAGTAGCAGAGTaGAAACGGTTGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: HHDVCPPHGGVLLAKVAGEKVAE*KRLQMP
Trigger: TGGCATCTGCAACCGTTTTCACTCTGCTACTTTTTC...TCCTGCCACTTTGGCAAGCAGTACACCTCCATGTGGAGGACATACATCATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR TCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp GTGAAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGCCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VKGVCKTCGIQVIQTTQLPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...CAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp TCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATCTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SNQVAKSTSLLGFPLLQNLDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...ATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCCTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTLDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: QPGCEEYISSRFPTASEWKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CTTCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: LQLYWTVVNVAFVNTASLKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...AAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTTCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: QLYWTVVNVAFVNTASLPSMLPL*TPQVFL
Trigger: AAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGA...AGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: FCVGFQLPVNSALGAVGSEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...ACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: GCEEYISSRFPTASEWGTEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTAGGGCTTTCTCAGCTTaGTTCTGTTCAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRRAFSA*FCSSDG
Trigger: ACCATCACTTGAACAGAATCAAGCTGAGAAAGCCCT...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGCTGGACATTCATGCATaGGTGTCTCTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: IATRGSRDWGWVDIINLGLDIHA*VSLIQK
Trigger: CTTCTGAATGAGAGACACTCATGCATGAATGTCCAG...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR TCA 90 bp GACCTCAGGATCATAGAATGTGGAGGGATTGGCCTGGGGTTCCTCACACTTTTCGTGGGTTTCATACCTTaGCTTGGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: DLRIIECGGIGLGFLTLFVGFIP*LGCSFE
Trigger: TTCAAAAGAACACCCAAGTCAAGGTATGAAACCCAC...GAAAAGTGTGAGGAACCCCAGGCCAATCCCTCCACATTCTATGATCCTGAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGTCACCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRVTSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGGTGAC...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTAGAGGGGCTGCTAGATaGGTCATGGATGCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLRGAAR*VMDAPF
Trigger: AAAGGGCGCATCCATGACTCATCTAGCAGCCCCTCT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCGAGGATTTAGGGGACTaGATGAGCTTGGACAACTTT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLEDLGD*MSLDNF
Trigger: AAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCCTC...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTACGTAAACATTCACTaGACATTGCTGGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLYVNIH*TLLVGP
Trigger: AGGGCCAACCAGCAATGTTCAGTGAATGTTTACGTA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCCAGGGACACTGACCTaGAACCCTGGATTTTACCTA +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHPGTLT*NPGFYL
Trigger: TAGGTAAAATCCAGGGTTTCAGGTCAGTGTCCCTGG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: DLATSFTNTCITTFYSKCHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PGCEEYISSRFPTASEWGLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: LADSSKQATFLACGSGTNIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp AGCGTGAACCAACCAGTTTTTAAGTCAATCAGGGTAGGTGGAGACCATTTAATCGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: SVNQPVFKSIRVGGDHLIGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...GATTAAATGGTCTCCACCTACCCTGATTGACTTAAAAACTGGTTGGTTCACGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCGRWTP*TPVSMV
Trigger: GACCATGGATACTGGAGTGCATGGAGTCCAGCGACC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: LADSSKQATFLACGSGTNELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTGTAGTTCTTCAGACTTaGCCTTCTCCAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATVVLQT*PSPTDE
Trigger: CTCATCTGTTGGAGAAGGGCAAGTCTGAAGAACTAC...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR GCA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: ETTDLATSFTNTCITTFYWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCTGGCTGGTCACGTGCTaGAGGAGTAATCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSWLVTC*RSNPSQ
Trigger: CTGACTTGGATTACTCCTGCAGCACGTGACCAGCCA...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGTCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCATCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCTCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: VTKLIATRGSRDWGWVDISFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCAGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: LATSFTNTCITTFYSKCPEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...TGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTGGAGTGTGTAAAACATaGGGGATCCAGGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRGVCKT*GIQVIQ
Trigger: TTGGATTACCTGGATCCCGCATGTTTTACACACTCC...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGCTGCCTTCTCTTGCTaGAGGAAATGTATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPAAFSC*RKCIRS
Trigger: ACTTCTGATACATTTCCTGCAGCAAGAGAAGGCAGC...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTGCCTTCCATGCTTATaGACTGGGGGTCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLCLPCL*TGGPRC
Trigger: ACACCTGGGACCCCCAGTGCATAAGCATGGAAGGCA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTCCCCAGAGCTAAACTaGAACTTGGAATGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHSPELN*NLECRD
Trigger: GTCCCTGCATTCCAAGTTGCAGTTTAGCTCTGGGGA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATCTCATGTGCTCACTaGTTCAGGCCAAGGGTGTGT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHISCAH*FRPRVC
Trigger: ACACACCCTTGGCCTGAAGCAGTGAGCACATGAGAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCCAAAGTGGCAGGAGTTaGGGCCACCGGTTATGTAGT +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSQSGRS*GHRLCS
Trigger: ACTACATAACCGGTGGCCCCAACTCCTGCCACTTTG...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GTGAAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: VKGVCKTCGIQVIQTTQLKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...CAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp GACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: DWGWVDIINLGSPCKGDNLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...GTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: DSSKQATFLACGSGTNTRLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp GTGAAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: VKGVCKTCGIQVIQTTQLGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...CAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: IATRGSRDWGWVDIINLGVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DLATSFTNTCITTFYSKCCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGTTATCGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ASHVFSMWIWHQHQDVVIGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...GATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCAGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: SDGGASLADSSKQATFLAGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...TGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: PFCVGFQLPVNSALGAVGKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...CCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGGGGTGTTCTTTTGAATaGACTGACATTAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: PGCEEYISSRFPTASEWGGCSFE*TDIRCW
Trigger: CCAGCATCTAATGTCAGTCCATTCAAAAGAACACCC...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
48% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAAGGGGGTCGAGGGACTaGGGATGGGTAGATATCATT +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIRGSRD*GWVDII
Trigger: AATGATATCTACCCATCCCCAGTCCCTCGACCCCCT...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCCACGTTTTTAGCATGTaGATCTGGCACCAACACCAG +
Preference number: 4 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSHVFSM*IWHQHQ
Trigger: CTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTG...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp CCAGGTATGTGGGTTTCATACCTTGACTTGGGTGTTCTTTTGAATGGACTGACATCCAAACCACCCAGCTaGAGCCTGCACTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: PGMWVSYLDLGVLLNGLTSKPPS*SLHLLD
Trigger: ATCAAGCAAGTGCAGGCTCCAGCTGGGTGGTTTGGA...TGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACTTCAGGGTTCATGTaGAAAGCATCCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNTSGFM*KASSVF
Trigger: GAACACTGAGGATGCTTTCCACATGAACCCTGAAGT...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCAGGATCATAGAATGTaGAGGGATTGGCCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHQDHRM*RDWPGV
Trigger: AACCCCAGGCCAATCCCTCCACATTCTATGATCCTG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTGTGGTAAGAGGATCTaGGGTTGTGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCCGKRI*GCAGWA
Trigger: AGCCCAGCCAGCACAACCCCAGATCCTCTTACCACA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TCTCAGGAGTCCCGGGCTTCTTGGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTACATAATGATTTGTTCTaGAATCAGCTGCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: SQESRASWACRCSLSVLVHNDLF*NQLLEK
Trigger: TTTCTCCAGCAGCTGATTCCAGAACAAATCATTATG...TACCAAAACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCTCCAAAGGAGGGTCTaGCTGAACATTCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHLQRRV*LNIQKA
Trigger: TGCCTTCTGAATGTTCAGCCAGACCCTCCTTTGGAG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000620785.4
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCCTTACTCTGACCTTTaGAGCTATTCCCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLPYSDL*SYSHCS
Trigger: AGAGCAATGGGAATAGCTCCAAAGGTCAGAGTAAGG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTCTCAAATCACAGGGTaGCAGGTTTATCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLSQITG*QVYPQI
Trigger: GATTTGGGGATAAACCTGCCACCCTGTGATTTGAGA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTCAAGGGAATTGATGTaGACAAAACAGCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLSRELM*TKQLPA
Trigger: TGCTGGCAGCTGTTTTGTCCACATCAATTCCCTTGA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCGAAAAAGTAGCAGAGTaGAAACGGTTGCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSEKVAE*KRLQMP
Trigger: TGGCATCTGCAACCGTTTTCACTCTGCTACTTTTTC...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: GCEEYISSRFPTASEWGTFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGCTGTTCTCTCTCTTaGCTTGGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPRCSLS*LGCSFE
Trigger: TTCAAAAGAACACCCAAGTCAAGAGAGAGAACAGCG...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAGGGCTTTCTCAGCTTaGTTCTGTTCAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSRAFSA*FCSSDG
Trigger: ACCATCACTTGAACAGAATCAAGCTGAGAAAGCCCT...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp AGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCAAGGGCTTTCTCAGCTTaGTTCTGTTCAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: SDGGASLADSSKQATFLARAFSA*FCSSDG
Trigger: ACCATCACTTGAACAGAATCAAGCTGAGAAAGCCCT...TGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGAGCCTGCACTTGCTTaGTGTTGCAGTGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISEPALA*CCSEVG
Trigger: GCCAACTTCACTGCAACATCAAGCAAGTGCAGGCTC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGCTGGACATTCATGCATaGGTGTCTCTCATTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQLDIHA*VSLIQK
Trigger: CTTCTGAATGAGAGACACTCATGCATGAATGTCCAG...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR TCA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGCAGTGTTCGCCTCCATaGATAGGAGAGTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: DSSKQATFLACGSGTNTRQCSPP*IGEFFS
Trigger: ACTAAAGAACTCTCCTATTCATGGAGGCGAACACTG...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCGTGGGTTTCATACCTTaGCTTGGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLVGFIP*LGCSFE
Trigger: TTCAAAAGAACACCCAAGTCAAGGTATGAAACCCAC...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGCCTGGCACTGGAATTaGCCGGGAGATTCTCATTAC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCAWHWN*PGDSHY
Trigger: GTAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAGAGGGGCTGCTAGATaGGTCATGGATGCGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLERGAAR*VMDAPF
Trigger: AAAGGGCGCATCCATGACTCATCTAGCAGCCCCTCT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCAGGCAGTAAAGGATTaGCCCCTTCAGACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLQAVKD*PLQTKP
Trigger: TGGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCTGCACCAGGGACACTaGCCTGAAACCCTGGATTTT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCLHQGH*PETLDF
Trigger: AAAATCCAGGGTTTCAGGTCAGTGTCCCTGGTGCAG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTTGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp AATTCTGGTATATGCTCTTCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTTGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: NSGICSSALLDCGQCCLCWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...ACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGCATATACCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR GCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGATTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: QPGCEEYISSRFPTASEWALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGGTAGTTCTTCAGACTTaGCCTTCTCCAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: DSSKQATFLACGSGTNTRVVLQT*PSPTDE
Trigger: CTCATCTGTTGGAGAAGGGCAAGTCTGAAGAACTAC...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCGTAGTTCTTCAGACTTaGCCTTCTCCAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSVVLQT*PSPTDE
Trigger: CTCATCTGTTGGAGAAGGGCAAGTCTGAAGAACTAC...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 4 (lower is better)
Translates to: ISLILGHPVRETTDLATSDCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTCTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAATGGGGGACCACGTaGTTTACATGGCAGTGCCTA +
Preference number: 4 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGEWGTT*FTWQCL
Trigger: TAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: SALLDCGQCCLCEHRKSSKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...GGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGTTATCGGAGTGTGTAAAACATaGGGGATCCAGGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: ASHVFSMWIWHQHQDVVIGVCKT*GIQVIQ
Trigger: TTGGATTACCTGGATCCCGCATGTTTTACACACTCC...GATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCGCTGCCTTCTCTTGCTaGAGGAAATGTATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFAAFSC*RKCIRS
Trigger: ACTTCTGATACATTTCCTGCAGCAAGAGAAGGCAGC...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGGATTTTGCCTTCCATaGTTATGCACTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCGFCLP*LCTGGP
Trigger: GGGACCCCCAGTGCATAAGCATGGAAGGCAAAATCC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGTCTTGGACATTGAGTaGTCAGTCACTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHVLDIE*SVTVSV
Trigger: CACTGAGACAGTGACTGAGCACTCAATGTCCAAGAC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: GASLADSSKQATFLACGSKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...AGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACCTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LADSSKQATFLACGSGTNLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCAGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCAGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AATTCTGGTATATGCTCTTCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTCCAGTATCCATGGTCTaGTTTGCAGCGAACCTGGAC +
Preference number: 4 (lower is better)
Translates to: NSGICSSALLDCGQCCLCPVSMV*FAANLD
Trigger: GTCCAGGTTCGCTGCAAACCAGACCATGGATACTGG...ACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGCATATACCAGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAACCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQPHSQK*EESLGI
Trigger: GATGCCAAGACTTTCCTCCCACTTCTGACTATGAGG...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHPHSQK*EESLGI
Trigger: GATGCCAAGACTTTCCTCCCACTTCTGACTATGAGG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACCCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: LADSSKQATFLACGSGTNPHSQK*EESLGI
Trigger: GATGCCAAGACTTTCCTCCCACTTCTGACTATGAGG...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGACTGACATTAGATGCTaGTCCTCACTATCATCTACT +
Preference number: 4 (lower is better)
Translates to: CEEYISSRFPTASEWGTTTDIRC*SSLSST
Trigger: AGTAGATGATAGTGAGGACCAGCATCTAATGTCAGT...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTGGGTGTTCTTTTGAATaGACTGACATTAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATGCSFE*TDIRCW
Trigger: CCAGCATCTAATGTCAGTCCATTCAAAAGAACACCC...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CCA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGGGGTGTTCTTTTGAATaGACTGACATTAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEGCSFE*TDIRCW
Trigger: CCAGCATCTAATGTCAGTCCATTCAAAAGAACACCC...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp GTTCCTGAATTCTGGTATATGCTCTTCAGCTCTACTGGACTGTGGTCAATGTTGGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: VPEFWYMLFSSTGLWSMLALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...CAACATTGACCACAGTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAGGAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCGCTCTTCAGCTCTACTaGACTGTGGTCAATGTTGCC +
Preference number: 4 (lower is better)
Translates to: DLATSFTNTCITTFYSKCALQLY*TVVNVA
Trigger: GGCAACATTGACCACAGTCCAGTAGAGCTGAAGAGC...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGGTCACACAGCATCTCCCTaGGGTGCACAGTCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: GKQREYVTFNIIVPFCVGHTASP*GAQSVL
Trigger: CAGGACAGACTGTGCACCCCAGGGAGATGCTGTGTG...ACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 4 (lower is better)
Translates to: QLYWTVVNVAFVNTASLPSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...AGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 4 (lower is better)
Translates to: VSMVWFAANLDKVFLSWMSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...CATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTCCCACTGCTTCAGAATaGGGGACCACGTGCTTTACA +
Preference number: 4 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGPTASE*GTTCFT
Trigger: TGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGG...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGAGTCCCGGGCTTCTTaGGCTTGCCGCTGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEESRAS*ACRCSL
Trigger: GAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACCACGTTTTTAGCATGTaGATCTGGCACCAACACCAG +
Preference number: 4 (lower is better)
Translates to: LADSSKQATFLACGSGTNHVFSM*IWHQHQ
Trigger: CTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTG...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCATGGTGGGGCCTCTTTaGCTGATTCTTCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTMVGPL*LILQSK
Trigger: CTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCAT...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATGGTGGGGCCTCTTTaGCTGATTCTTCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHMVGPL*LILQSK
Trigger: CTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAATGGTGGGGCCTCTTTaGCTGATTCTTCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQMVGPL*LILQSK
Trigger: CTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCAT...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTCCAAACCACCCAGCTaGAGCCTGCACTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLSKPPS*SLHLLD
Trigger: ATCAAGCAAGTGCAGGCTCCAGCTGGGTGGTTTGGA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTACTTCAGGGTTCATGTaGAAAGCATCCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: GASLADSSKQATFLACGSTSGFM*KASSVF
Trigger: GAACACTGAGGATGCTTTCCACATGAACCCTGAAGT...AGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGTGGAGGGATTGGCCTaGGGTTCCTCACACTTTTCA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCVEGLA*GSSHFS
Trigger: TGAAAAGTGTGAGGAACCCCAGGCCAATCCCTCCAC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATGGGGGTCCCAGGTGTaGGTTGTTTCAGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISWGSQV*VVSGFS
Trigger: AGAGAATCCTGAAACAACCCACACCTGGGACCCCCA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTGGGGTTGTGCTGGCTaGGCTGTGGTAAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAWGCAG*AVVRAM
Trigger: CATGGCCCTTACCACAGCCCAGCCAGCACAACCCCA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGATCTGGGGTTGTGCTaGCTGGGCTGTGGTAAGGGC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYADLGLC*LGCGKG
Trigger: GCCCTTACCACAGCCCAGCCAGCACAACCCCAGATC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATGTGGTAAGAGGATCTaGGGTTGTGCTGGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLECGKRI*GCAGWA
Trigger: AGCCCAGCCAGCACAACCCCAGATCCTCTTACCACA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTAGCCAGGGCGTATCCTaGTCAGTCTCAGAATGGAAG +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLSQGVS*SVSEWK
Trigger: CTTCCATTCTGAGACTGACCAGGATACGCCCTGGCT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAGCCAGGGCGTATCCTaGTCAGTCTCAGAATGGAAG +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCSQGVS*SVSEWK
Trigger: CTTCCATTCTGAGACTGACCAGGATACGCCCTGGCT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGAGATTTGGGGCTGTTaGATTCAGCAAGGAATGAGC +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHEIWGC*IQQGMS
Trigger: GCTCATTCCTTGCTGAATCCAACAGCCCCAAATCTC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGGCCAGGAAGGTCCCTaGTGGGGGCTTTTCAATAAT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISGQEGP*WGLFNN
Trigger: ATTATTGAAAAGCCCCCACCAGGGACCTTCCTGGCC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp TTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTaGGCCACATCCTTCACAAACACCTGCATAACAACC +
Preference number: 4 (lower is better)
Translates to: LILGHPVRETTD*ATSFTNTCITT
Trigger: GGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CAA 72 bp GTCATGGATGCGCCCTTTAAAATGAGGATCCAAGCTTaGACTTCTTTCAGGAAGCCTGGCACTGGAATTGAC +
Preference number: 4 (lower is better)
Translates to: VMDAPFKMRIQA*TSFRKPGTGID
Trigger: GTCAATTCCAGTGCCAGGCTTCCTGAAAGAAGTCAAAGCTTGGATCCTCATTTTAAAGGGCGCATCCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp AGTTGGAGGAACAGATCTCTGTTTTTCTCTGAAGCGTaGTCACACAATCTCATGTGCTCACTGCTTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SWRNRSLFFSEA*SHNLMCSLLQA
Trigger: GGCCTGAAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCTGTTCCTCCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCCCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp TCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATCCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: SNQVAKSTSLLGFPLLQNPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...ATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: SALLDCGQCCLCEHRKSSFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...GGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: DLATSFTNTCITTFYSKCKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PVRETTDLATSFTNTCITTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...TGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTCGCTGTTCTCTCTCTTaGCTTGGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVRCSLS*LGCSFE
Trigger: TTCAAAAGAACACCCAAGTCAAGAGAGAGAACAGCG...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAGGGCTTTCTCAGCTTaGTTCTGTTCAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHRAFSA*FCSSDG
Trigger: ACCATCACTTGAACAGAATCAAGCTGAGAAAGCCCT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGAGCCTGCACTTGCTTaGTGTTGCAGTGAAGTTGGC +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEEPALA*CCSEVG
Trigger: GCCAACTTCACTGCAACATCAAGCAAGTGCAGGCTC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATCCTGCACGAGGACATaGAGCTCCATTGTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSCTRT*SSIVWK
Trigger: TTTCCACACAATGGAGCTTCATGTCCTCGTGCAGGA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618457.5
CDS-3UTR TCA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCGTTAAAAATGGAGCATaGAAGGAGCTGGGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSVKNGA*KELGAL
Trigger: TAAAGCTCCCAGCTCCTTTCATGCTCCATTTTTAAC...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp GGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCGTCACCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: GLQRTWTRYFCPGCRLRIVTSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGGTGAC...GATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618625.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTGGACACTTCTGATATaGGCCATTTCTGCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLWTLLI*AISASA
Trigger: GGCAGAGGCAGAAATGGCTCATATCAGAAGTGTCCA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACAGGAGGGGGACCTCTaGGTCCAGTTGCTATCAATA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEQEGDL*VQLLSI
Trigger: TATTGATAGCAACTGGACTCAGAGGTCCCCCTCCTG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCATGTATCCTTCCATTTaGACAGCTGTCTCCTTGATA +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLMYPSI*TAVSLI
Trigger: TATCAAGGAGACAGCTGTTCAAATGGAAGGATACAT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGCAGTGGTGGACACTTaGGGAAAGAGAAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEAVVDT*GKRKPE
Trigger: CTCTGGCTTTCTCTTTCCTCAAGTGTCCACCACTGC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTCACTCAAGAACACATaGGACTTTCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHSLKNT*DFRQWH
Trigger: GTGCCATTGACGAAAGTCTCATGTGTTCTTGAGTGA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCCAGGGACACTGACCTaGAACCCTGGATTTTACCTA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCPGTLT*NPGFYL
Trigger: TAGGTAAAATCCAGGGTTTCAGGTCAGTGTCCCTGG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGTGTCAGCAGTCACATaGAACAAAGCCGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEVSAVT*NKAERL
Trigger: CAGCCTCTCGGCTTTGTTTCATGTGACTGCTGACAC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCACTAAGTATTCTTTCTaGATCTTTCTTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLTKYSF*IFLAAG
Trigger: ACCGGCTGCAAGAAAGATTCAGAAAGAATACTTAGT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAGAAAACGGTTGCAGATaGCACATTTTCCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPENGCR*HIFLHV
Trigger: AACATGAAGGAAAATGTGGCATCTGCAACCGTTTTC...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACGAAAACGGTTGCAGATaGCACATTTTCCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNENGCR*HIFLHV
Trigger: AACATGAAGGAAAATGTGGCATCTGCAACCGTTTTC...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GCACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTGAAAACGGTTGCAGATaGCACATTTTCCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: ALQYPWSGLQRTWTRYFCENGCR*HIFLHV
Trigger: AACATGAAGGAAAATGTGGCATCTGCAACCGTTTTC...ACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATGGAGGTGTACTGCTTaGCAAAGTGGCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEWRCTA*QSGRSW
Trigger: CCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR GCA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTATCCATGGTCTGGTTTaGAGCGAACCTGGACAAGGT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCIHGLV*SEPGQG
Trigger: ACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGAT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGAACTGGCGGAAAGATaGAGGTCACCATGCTATAGC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCELAER*RSPCYS
Trigger: GCTATAGCATGGTGACCTGCATCTTTCCGCCAGTTC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCGACTGTGGTCAATGTTaGCTTTGTGAACACCGCAAG +
Preference number: 4 (lower is better)
Translates to: DLATSFTNTCITTFYSKCDCGQC*LCEHRK
Trigger: CTTGCGGTGTTCACAAAGGCAACATTGACCACAGTC...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGGTGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: GKQREYVTFNIIVPFCVGAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...ACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCATCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TTGGGCTTGCCGCTGTTCTCTCTCTGTTTTGGTAGCAATGATAATGCACCATCTGGAGTGTGTAAAACATaGGGGATCCAGGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: LGLPLFSLCFGSNDNAPSGVCKT*GIQVIQ
Trigger: TTGGATTACCTGGATCCCGCATGTTTTACACACTCC...AGATGGTGCATTATCATTGCTACCAAAACAGAGAGAGAACAGCGGCAAGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp TCCTTTTATTTTTGGCCCAGGAACTGGCGGAAAGATGCAGGTCACCATGCTATAGCTGCCTTCTCTTGCTaGAGGAAATGTATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SFYFWPRNWRKDAGHHAIAAFSC*RKCIRS
Trigger: ACTTCTGATACATTTCCTGCAGCAAGAGAAGGCAGC...TATAGCATGGTGACCTGCATCTTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCGCTGCCTTCTCTTGCTaGAGGAAATGTATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTAAFSC*RKCIRS
Trigger: ACTTCTGATACATTTCCTGCAGCAAGAGAAGGCAGC...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp GCTGAACTATGTAAGTCACGTCCACATAAAGTTCATCCGAGAAACTGCTTCCCACTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: AELCKSRPHKVHPRNCFPLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...TGGGAAGCAGTTTCTCGGATGAACTTTATGTGGACGTGACTTACATAGTTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CCA 90 bp ATTGACCATCATGATGTATGTCCTCCACATGGAGGTGTACTGCTTGCCAAAGTGGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: IDHHDVCPPHGGVLLAKVVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...CACTTTGGCAAGCAGTACACCTCCATGTGGAGGACATACATCATGATGGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLECCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLLNEGR*TPCTPV
Trigger: TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp CAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: QLYWTVVNVAFVNTASLPKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...AGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGTGGGAGGAAAGTCTTaGCATCCCAAGGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEVGGKS*HPKALS
Trigger: ACTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCAC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCACTGACATTAGATGCTaGTCCTCACTATCATCTACT +
Preference number: 4 (lower is better)
Translates to: GLQRTWTRYFCPGCRLRITDIRC*SSLSST
Trigger: AGTAGATGATAGTGAGGACCAGCATCTAATGTCAGT...GATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCAGGGTGTTCTTTTGAATaGACTGACATTAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPGCSFE*TDIRCW
Trigger: CCAGCATCTAATGTCAGTCCATTCAAAAGAACACCC...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATATTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPILSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCTTGTCCCTTTTTGTGTaGGTTTCCAGCTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSLSLFV*VSSSQS
Trigger: TGACTGGGAGCTGGAAACCCACACAAAAAGGGACAA...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCTCGAGGGACTGGGGATaGGTAGATATCATTAATCTT +
Preference number: 4 (lower is better)
Translates to: SLILGHPVRETTDLATSFSRDWG*VDIINL
Trigger: AAGATTAATGATATCTACCCATCCCCAGTCCCTCGA...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAATTTAGCATGTGGATCTaGCACCAACACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQFSMWI*HQHQDV
Trigger: AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAA...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTTTTAGCATGTGGATCTaGCACCAACACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVFSMWI*HQHQDV
Trigger: AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAA...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCACTTCAGGGTTCATGTaGAAAGCATCCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: SLADSSKQATFLACGSGTTSGFM*KASSVF
Trigger: GAACACTGAGGATGCTTTCCACATGAACCCTGAAGT...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTTGTTTCAGGATTCTCTaGCTTCTCAATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVCFRIL*LLNDLR
Trigger: CCTGAGGTCATTGAGAAGCCAGAGAATCCTGAAACA...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCTTCATTCAACAGAGTaGCCGGTGCACCTGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDLHSTE*PVHLQG
Trigger: GCCCTGCAGGTGCACCGGCCACTCTGTTGAATGAAG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCAGAAAACCGGCGTCTaGGGATTTCAGCCTCCGCTC +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDQKTGV*GFQPPL
Trigger: GAGCGGAGGCTGAAATCCCCAGACGCCGGTTTTCTG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAGATGCCCAAATCTCTaGAAACTTCCTATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLRCPNL*KLPISC
Trigger: ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCAGCCCCAAAGAAACTaGGGAGATTTAGAATGTATA +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLQPQRN*GDLECI
Trigger: TATACATTCTAAATCTCCCCAGTTTCTTTGGGGCTG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR TCA 90 bp GACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: DWGWVDIINLGSPCKGDNFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...GTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: QPGCEEYISSRFPTASEWFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACCCTTCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPPFSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGAAGGG...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACAAGTCTTCCTTGACTTaGGATTTTTCTTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: ILGHPVRETTDLATSFTNKSSLT*DFSWSV
Trigger: TACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTT...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGAAGTCTTCCTTGACTTaGGATTTTTCTTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: IATRGSRDWGWVDIINLGKSSLT*DFSWSV
Trigger: TACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTT...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTAAGTCTTCCTTGACTTaGGATTTTTCTTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: QLYWTVVNVAFVNTASLPKSSLT*DFSWSV
Trigger: TACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTT...AGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAAGTCTTCCTTGACTTaGGATTTTTCTTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATKSSLT*DFSWSV
Trigger: TACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTT...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp TCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SNQVAKSTSLLGFPLLQNTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...ATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ISLILGHPVRETTDLATSTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATATCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPISMLPL*TPQVFL
Trigger: AAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGA...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATGCACCATCTTTGTTaGCCTTGTGAATCTCCACAT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHMHHLC*PCESPH
Trigger: ATGTGGAGATTCACAAGGTCAACAAAGATGGTGCAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTAAGTCTTTCTGCAAATaGTGGGCAGTGGTGGACACT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLKSFCK*WAVVDT
Trigger: AGTGTCCACCACTGCCCATCATTTGCAGAAAGACTT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAATGGGATATACTTGTaGTCTTCAACTTGGCCTTGG +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHNGIYL*SSTWPW
Trigger: CCAAGGCCAAGTTGAAGATCACAAGTATATCCCATT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTACAAAGCCGAGAGGCTaGCTTTCAAACAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLTKPRG*LSNNCW
Trigger: CCAACAGTTGTTTGAAAGTCAGCCTCTCGGCTTTGT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACCTGTGTCTGGTGACTaGGACTTCAAATTTTGCACC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISPVSGD*DFKFCT
Trigger: GGTGCAAAATTTGAAGTCTCAGTCACCAGACACAGG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAGAAAACGGTTGCAGATaGCACATTTTCCTTCATGTT +
Preference number: 4 (lower is better)
Translates to: PVRETTDLATSFTNTCITENGCR*HIFLHV
Trigger: AACATGAAGGAAAATGTGGCATCTGCAACCGTTTTC...TGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGGTCACATGGAGGTGTACTaGTTGCCAAAGTGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKQREYVTFNIIVPFCVGHMEVY*LPKWQE
Trigger: CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTG...ACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAATTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR GCA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCAATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR GCA 90 bp CCAGGTATGTGGGTTTCATACCTTGACTTGGGTGTTCTTTTGAATGGACTGACAGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: PGMWVSYLDLGVLLNGLTALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...TGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp AAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTGCTCCCAGTCAATTCTaGTTTGGGGGCAGTAGGGAG +
Preference number: 4 (lower is better)
Translates to: KALGKQREYVTFNIIVPFAPSQF*FGGSRE
Trigger: CTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGC...AAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACATCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: PVRETTDLATSFTNTCITSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...TGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCACCCAGCTGGAGCCTaGACTTGCTTGATGTTGCAG +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDHPAGA*TCLMLQ
Trigger: CTGCAACATCAAGCAAGTGCAGGCTCCAGCTGGGTG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTGCCTTCCATGCTTATaGACTGGGGGTCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDCLPCL*TGGPRC
Trigger: ACACCTGGGACCCCCAGTGCATAAGCATGGAAGGCA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTGCAGTGTTGTTCATTaGAAGTCAAACAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLCSVVH*KSNRLD
Trigger: ATCAAGTCTGTTTGACTTGCAATGAACAACACTGCA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGACACAGAGCAAAACTaGCCAGATCTTGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLDTEQN*PDLVQA
Trigger: TGCCTGTACAAGATCTGGGCAGTTTTGCTCTGTGTC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGCAGGGACCTCTGGTTaGTCAATAACTCATAGGCTT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLAGTSG*SITHRL
Trigger: AAGCCTATGAGTTATTGAGCAACCAGAGGTCCCTGC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTACAAAGTTCCAATGTaGATGCATTGTTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLYKVPM*MHCSLQ
Trigger: CTGAAGAGAACAATGCATGCACATTGGAACTTTGTA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATCACACAATCTCATGTaGTCACTGCTTCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSHNLM*SLLQAK
Trigger: CTTGGCCTGAAGCAGTGAGCACATGAGATTGTGTGA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCATGGAATCCTGAGATaGCCAAATCTCTGGAAACTT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHHGILR*PNLWKL
Trigger: AAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTGTGGACAAAACAGCTaGCAGCATGATAGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHCGQNS*QHDSVC
Trigger: ACAAACACTATCATGCTGGCAGCTGTTTTGTCCACA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACTCCAAAGGAGGGTCTaGCTGAACTATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISLQRRV*LNYVSH
Trigger: GTGACTTACATAGTTCAGCCAGACCCTCCTTTGGAG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR CCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCAAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: SDGGASLADSSKQATFLAKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...TGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGACTGACATTAGATGCTaGTCCTCACTATCATCTACT +
Preference number: 4 (lower is better)
Translates to: QPGCEEYISSRFPTASEWTDIRC*SSLSST
Trigger: AGTAGATGATAGTGAGGACCAGCATCTAATGTCAGT...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CCA 90 bp AGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCAACTGACATTAGATGCTaGTCCTCACTATCATCTACT +
Preference number: 4 (lower is better)
Translates to: SDGGASLADSSKQATFLATDIRC*SSLSST
Trigger: AGTAGATGATAGTGAGGACCAGCATCTAATGTCAGT...TGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACGGGTGTTCTTTTGAATaGACTGACATTAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: LADSSKQATFLACGSGTNGCSFE*TDIRCW
Trigger: CCAGCATCTAATGTCAGTCCATTCAAAAGAACACCC...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGGGTGTTCTTTTGAATaGACTGACATTAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHGCSFE*TDIRCW
Trigger: CCAGCATCTAATGTCAGTCCATTCAAAAGAACACCC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGGTACCACGTGCTTTACATaGCAGTGCCTAAGGGGGACA +
Preference number: 4 (lower is better)
Translates to: GKQREYVTFNIIVPFCVGTTCFT*QCLRGT
Trigger: TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGT...ACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTCCATGCTTATGCACTaGGGGTCCCAGGTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSMLMH*GSQVWV
Trigger: AACCCACACCTGGGACCCCCAGTGCATAAGCATGGA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCCATGCTTATGCACTaGGGGTCCCAGGTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASMLMH*GSQVWV
Trigger: AACCCACACCTGGGACCCCCAGTGCATAAGCATGGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTCTGGAATCAGCTGCTaGAGAAAGAGGCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCSGISC*RKRQVV
Trigger: AACCACTTGCCTCTTTCTCCAGCAGCTGATTCCAGA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCAGTGGGCTTTGGGTTaGTATGGCATTTTACTCCAC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCQWALG*YGILLH
Trigger: GTGGAGTAAAATGCCATACCAACCCAAAGCCCACTG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTCAATATGGGATAGTTaGGGTGGAATATTTAACTCC +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLSIWDS*GGIFNS
Trigger: GGAGTTAAATATTCCACCCCAACTATCCCATATTGA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTTCACTGAACATTGCTaGTTGGCCCTTAGACCATTT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHFTEHC*LALRPF
Trigger: AAATGGTCTAAGGGCCAACCAGCAATGTTCAGTGAA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAGAATTAAAGGCAGTTaGCTTCAATATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLRIKGS*LQYKHR
Trigger: CCTGTGCTTATATTGAAGCCAACTGCCTTTAATTCT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCAGGAAGGTCCCTGGTaGGGGCTTTTCAATAATTCT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLQEGPW*GLFNNS
Trigger: AGAATTATTGAAAAGCCCCCACCAGGGACCTTCCTG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGCCTCCACCAGCAGGTaGATGTTTCCTTATTGGGAG +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEASTSR*MFPYWE
Trigger: CTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR TCA 90 bp GGTCACCATGCTATAGCCCTTCAAAGCCACTGCCCAGACAATAATCAAACAGATCCCTTCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: GHHAIALQSHCPDNNQTDPFSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGAAGGG...ATCTGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGCTATAGCATGGTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR TCA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACCCCTTCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: LADSSKQATFLACGSGTNPFSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGAAGGG...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR TCA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGAAGTCTTCCTTGACTTaGGATTTTTCTTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: QPGCEEYISSRFPTASEWKSSLT*DFSWSV
Trigger: TACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTT...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp ACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATCAATGTTGCCTTTGTaGACACCGCAAGTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: TDLATSFTNTCITTFYSKSMLPL*TPQVFL
Trigger: AAGGAAGACTTGCGGTGTTCACAAAGGCAACATTGA...TTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAGGGCTTTCTCAGCTTaGTTCTGTTCAAGTGATGGT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCRAFSA*FCSSDG
Trigger: ACCATCACTTGAACAGAATCAAGCTGAGAAAGCCCT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTGCCACATCAGTCGATaGGTACTTCCTGCACGAGGA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDCHISR*VLPARG
Trigger: TCCTCGTGCAGGAAGTACTCATCGACTGATGTGGCA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAAAGGAGGGTCTGGCTaGACATTCAGAAGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAKGGSG*TFRRQV
Trigger: CACCTGCCTTCTGAATGTTCAGCCAGACCCTCCTTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGCCTGGCACTGGAATTaGCCGGGAGATTCTCATTAC +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEAWHWN*PGDSHY
Trigger: GTAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTTAACTCCCAGAGGTaGGCTCAAGTTCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISFNSQR*AQVLYV
Trigger: GACATAGAGAACTTGAGCTCACCTCTGGGAGTTAAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCAGGAGGGGGACCTCTaGGTCCAGTTGCTATCAATA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDQEGDL*VQLLSI
Trigger: TATTGATAGCAACTGGACTCAGAGGTCCCCCTCCTG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGGATTCAGCAAGGAATaGGCATGGCTTGATTCAGTA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCGFSKE*AWLDSV
Trigger: TACTGAATCAAGCCATGCTCATTCCTTGCTGAATCC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGAGTGTAAGGATACATaGGCCAACTGTGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISECKDT*ANCAMV
Trigger: AACCATTGCACAGTTGGCTCATGTATCCTTACACTC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGAGTGTAAGGATACATaGGCCAACTGTGCAATGGTT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLECKDT*ANCAMV
Trigger: AACCATTGCACAGTTGGCTCATGTATCCTTACACTC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCAGGCAGTAAAGGATTaGCCCCTTCAGACCAAGCCA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDQAVKD*PLQTKP
Trigger: TGGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGCAGTGGTGGACACTTaGGGAAAGAGAAAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEAVVDT*GKRKPE
Trigger: CTCTGGCTTTCTCTTTCCTCAAGTGTCCACCACTGC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTCACTCAAGAACACATaGGACTTTCGTCAATGGCAC +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLSLKNT*DFRQWH
Trigger: GTGCCATTGACGAAAGTCTCATGTGTTCTTGAGTGA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCATTTCATGGAATCCTaGGATGCCCAAATCTCTGGA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCHFMES*DAQISG
Trigger: TCCAGAGATTTGGGCATCTCAGGATTCCATGAAATG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATTTAAATCAAGGGAATTaGTGTGGACAAAACAGCTGC +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHLNQGN*CGQNSC
Trigger: GCAGCTGTTTTGTCCACATCAATTCCCTTGATTTAA...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAACAAAGCCGAGAGGCTaGCTTTCAAACAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLETKPRG*LSNNCW
Trigger: CCAACAGTTGTTTGAAAGTCAGCCTCTCGGCTTTGT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGTGTCAGCAGTCACATaGAACAAAGCCGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDVSAVT*NKAERL
Trigger: CAGCCTCTCGGCTTTGTTTCATGTGACTGCTGACAC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: DLATSFTNTCITTFYSKCLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGTAGTTCTTCAGACTTaGCCTTCTCCAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCVVLQT*PSPTDE
Trigger: CTCATCTGTTGGAGAAGGGCAAGTCTGAAGAACTAC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACCTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: ETTDLATSFTNTCITTFYLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp TTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCACTGAATTCTGGTATATaGTCTTCAGCTCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: LATSFTNTCITTFYSKCPLNSGI*SSALLD
Trigger: GTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAG...TGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp ATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTCCTTCACAAACACCTaGATAACAACCTTTTACTCC +
Preference number: 4 (lower is better)
Translates to: ISLILGHPVRETTDLATSSFTNT*ITTFYS
Trigger: GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGA...GGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCAAGATCCAACCAGGTTaGGAAGAGTACATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DLATSFTNTCITTFYSKCKIQPG*EEYISS
Trigger: AGAAGAGATGTACTCTTCGCAACCTGGTTGGATCTT...GCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGGATTTTGCCTTCCATaGTTATGCACTGGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAGFCLP*LCTGGP
Trigger: GGGACCCCCAGTGCATAAGCATGGAAGGCAAAATCC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCTTTCTACCTCCCTCTaGTGGGTTGCCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYALSTSL*WVAFPS
Trigger: AGAGGGAAAGGCAACCCAGCAGAGGGAGGTAGAAAG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACTTTCTACCTCCCTCTaGTGGGTTGCCTTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDELSTSL*WVAFPS
Trigger: AGAGGGAAAGGCAACCCAGCAGAGGGAGGTAGAAAG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGGAATTTTCAAACACTaGCCAGGTGATGCCTATGCA +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISGIFKH*PGDAYA
Trigger: TGCATAGGCATCACCTGGGCAGTGTTTGAAAATTCC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAAGGCTTTCTTGCACTaGACCAGGGACACTGACCTG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAKAFLH*TRDTDL
Trigger: CAGGTCAGTGTCCCTGGTGCAGTGCAAGAAAGCCTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAAGGCTTTCTTGCACTaGACCAGGGACACTGACCTG +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDKAFLH*TRDTDL
Trigger: CAGGTCAGTGTCCCTGGTGCAGTGCAAGAAAGCCTT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTCAGCAAGGCTTTCTTaGACTGCACCAGGGACACTG +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSARLS*TAPGTL
Trigger: CAGTGTCCCTGGTGCAGTGCAAGAAAGCCTTGCTGA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTCACCCAGGCTGGAGTaGAGTGACACAATCACGGTT +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSPRLE*SDTITV
Trigger: AACCGTGATTGTGTCACTGCACTCCAGCCTGGGTGA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTTTATCAAAATGGGTaGCATGAGGGTCCCAGACCA +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISFYQNG*HEGPRP
Trigger: TGGTCTGGGACCCTCATGGCACCCATTTTGATAAAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTCAAAGTGGCAGGAGTTaGGGCCACCGGTTATGTAGT +
Preference number: 4 (lower is better)
Translates to: KALGKQREYVTFNIIVPFQSGRS*GHRLCS
Trigger: ACTACATAACCGGTGGCCCCAACTCCTGCCACTTTG...AAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGTCAATCAGGGTAGGTaGAGACCATTTAATCCACAG +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCVNQGR*RPFNPQ
Trigger: CTGTGGATTAAATGGTCTCCACCTACCCTGATTGAC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGTGCTGCCCAGCAAAATaGATCTCCCACTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LGKQREYVTFNIIVPFCVCCPAK*ISHSAA
Trigger: AGCAGCTGAGTGGGAGATCCATTTTGCTGGGCAGCA...CACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACCTCATAGTCAGAAGTaGGAGGAAAGTCTTGGCATC +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEPHSQK*EESLGI
Trigger: GATGCCAAGACTTTCCTCCCACTTCTGACTATGAGG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAACTGACATTAGATGCTaGTCCTCACTATCATCTACT +
Preference number: 4 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQTDIRC*SSLSST
Trigger: AGTAGATGATAGTGAGGACCAGCATCTAATGTCAGT...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATACTGACATTAGATGCTaGTCCTCACTATCATCTACT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHTDIRC*SSLSST
Trigger: AGTAGATGATAGTGAGGACCAGCATCTAATGTCAGT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGAGTGATCATATGAGCTaGCTGGTCACGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LGKQREYVTFNIIVPFCVSDHMS*LVTCCR
Trigger: CCTGCAGCACGTGACCAGCCAGCTCATATGATCACT...CACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTTAGCATGTGGATCTaGCACCAACACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISFSMWI*HQHQDV
Trigger: AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACACGTTTTTAGCATGTaGATCTGGCACCAACACCAG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEHVFSM*IWHQHQ
Trigger: CTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTCCAAACCACCCAGCTaGAGCCTGCACTTGCTTGAT +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSKPPS*SLHLLD
Trigger: ATCAAGCAAGTGCAGGCTCCAGCTGGGTGGTTTGGA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAAACTTCAGGGTTCATGTaGAAAGCATCCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: TDLATSFTNTCITTFYSKTSGFM*KASSVF
Trigger: GAACACTGAGGATGCTTTCCACATGAACCCTGAAGT...TTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAACTTCAGGGTTCATGTaGAAAGCATCCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISTSGFM*KASSVF
Trigger: GAACACTGAGGATGCTTTCCACATGAACCCTGAAGT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCAGGATCCAGGTATGTaGGTTTCATACCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLQDPGM*VSYLDL
Trigger: CAAGTCAAGGTATGAAACCCACATACCTGGATCCTG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGTGGAGGGATTGGCCTaGGGTTCCTCACACTTTTCA +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAVEGLA*GSSHFS
Trigger: TGAAAAGTGTGAGGAACCCCAGGCCAATCCCTCCAC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATGTTTCAGGATTCTCTaGCTTCTCAATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISCFRIL*LLNDLR
Trigger: CCTGAGGTCATTGAGAAGCCAGAGAATCCTGAAACA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTGGGGGTCCCAGGTGTaGGTTGTTTCAGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAWGSQV*VVSGFS
Trigger: AGAGAATCCTGAAACAACCCACACCTGGGACCCCCA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACTTCATATTTCACAGTaGGCTTTGGGTTGGTATGGC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISLHISQ*ALGWYG
Trigger: GCCATACCAACCCAAAGCCCACTGTGAAATATGAAG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCCTTACTCTGACCTTTaGAGCTATTCCCATTGCTCT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCPYSDL*SYSHCS
Trigger: AGAGCAATGGGAATAGCTCCAAAGGTCAGAGTAAGG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAATGATGGGCAGTGGTaGACACTTGAGGAAAGAGAA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCNDGQW*TLEERE
Trigger: TTCTCTTTCCTCAAGTGTCCACCACTGCCCATCATT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGCAAATGATGGGCAGTaGTGGACACTTGAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEANDGQ*WTLEER
Trigger: TCTTTCCTCAAGTGTCCACCACTGCCCATCATTTGC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATCAAGGGAATTGATGTaGACAAAACAGCTGCCAGCA +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSRELM*TKQLPA
Trigger: TGCTGGCAGCTGTTTTGTCCACATCAATTCCCTTGA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAACTTCACTTCAATATaGCTTTACAGAAGACACAGT +
Preference number: 4 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLNFTSI*LYRRHS
Trigger: ACTGTGTCTTCTGTAAAGCCATATTGAAGTGAAGTT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGGATCTCCTTGTATCTaGTTCCATCTCCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLGSPCI*FHLPSF
Trigger: AAATGAGGGGAGATGGAACCAGATACAAGGAGATCC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp GGTATGTGGGTTTCATACCTTGACTTGGGTGTTCTTTaGAATGGACTGACATTAGATGCTGGTCCTCACTAT +
Preference number: 4 (lower is better)
Translates to: GMWVSYLDLGVL*NGLTLDAGPHY
Trigger: ATAGTGAGGACCAGCATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CAA 72 bp TGTCAGGATCCAGGTATGTGGGTTTCATACCTTGACTaGGGTGTTCTTTTGAATGGACTGACATTAGATGCT +
Preference number: 4 (lower is better)
Translates to: CQDPGMWVSYLD*GVLLNGLTLDA
Trigger: AGCATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGGATCCTGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
3UTR CAA 72 bp CTGGGAAGCAAATACCTAGTTTCCCAGAACTTTTATTaGGACACTTCTGATATGAGCCATTTCTGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LGSKYLVSQNFY*DTSDMSHFCLC
Trigger: GCAGAGGCAGAAATGGCTCATATCAGAAGTGTCCAAATAAAAGTTCTGGGAAACTAGGTATTTGCTTCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp GAATTTTCAAACACTGCCCAGGTGATGCCTATGCAGTaGGTTCTCAGACAGTTAAAGTATCGAGGATTTAGG +
Preference number: 4 (lower is better)
Translates to: EFSNTAQVMPMQ*VLRQLKYRGFR
Trigger: CCTAAATCCTCGATACTTTAACTGTCTGAGAACCAACTGCATAGGCATCACCTGGGCAGTGTTTGAAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp GAAGCACAAAATCCAGCCTCATTATGCAAAGAACACTaGAGAAGTGTCAGCAGTCACATGAAACAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: EAQNPASLCKEH*RSVSSHMKQSR
Trigger: TCGGCTTTGTTTCATGTGACTGCTGACACTTCTCAAGTGTTCTTTGCATAATGAGGCTGGATTTTGTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCTGGACATTCATGCATaGGTGTCTCTCCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYALDIHA*VSLLPC
Trigger: ACAGGGAAGGAGAGACACTCATGCATGAATGTCCAG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR TCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATATTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp AGCGTGAACCAACCAGTTTTTAAGTCAATCAGGGTAGGTGGAGACCATTTAATCGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SVNQPVFKSIRVGGDHLIEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...GATTAAATGGTCTCCACCTACCCTGATTGACTTAAAAACTGGTTGGTTCACGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR TCA 90 bp ATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAGGGGAGAAAATGTTaGGTTCCTGAATTCTGGTAT +
Preference number: 4 (lower is better)
Translates to: ILHKHLHNNLLLQMPIGGEGRKC*VPEFWY
Trigger: ATACCAGAATTCAGGAACTCAACATTTTCTCCCCTC...ACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGTGGGTTTCATACCTTaGCTTGGGTGTTCTTTTGAA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCVGFIP*LGCSFE
Trigger: TTCAAAAGAACACCCAAGTCAAGGTATGAAACCCAC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAATGCACCATCTTTGTTaGCCTTGTGAATCTCCACAT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISMHHLC*PCESPH
Trigger: ATGTGGAGATTCACAAGGTCAACAAAGATGGTGCAT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATACGTAAACATTCACTaGACATTGCTGGTTGGCCCT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEYVNIH*TLLVGP
Trigger: AGGGCCAACCAGCAATGTTCAGTGAATGTTTACGTA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTATGCAAAGAACACTTaGGAAGTGTCAGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLYAKNT*EVSAVT
Trigger: TGTGACTGCTGACACTTCTCAAGTGTTCTTTGCATA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: TDLATSFTNTCITTFYSKLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...TTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISLNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: TTDLATSFTNTCITTFYSILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...GGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTGAAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: VKALGKQREYVTFNIIVPALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...AGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGCCCTTCAAAGCCACTaGCCAGACAATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEALQSH*PDNNQT
Trigger: TGTTTGATTATTGTCTGGGCAGTGGCTTTGAAGGGC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGGAGTGTGTAAAACATaGGGGATCCAGGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEGVCKT*GIQVIQ
Trigger: TTGGATTACCTGGATCCCGCATGTTTTACACACTCC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGCTGCCTTCTCTTGCTaGAGGAAATGTATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEAAFSC*RKCIRS
Trigger: ACTTCTGATACATTTCCTGCAGCAAGAGAAGGCAGC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTTTCCGTCTGTCCCATaGCAAATCATGAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLFPSVP*QIMKAF
Trigger: AAAGGCTTTCATGATTTGGCATGGGACAGACGGAAA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGATATGAGCCATTTCTaGCTCTGCCAAGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCDMSHF*LCQDFA
Trigger: TGCAAAATCTTGGCAGAGGCAGAAATGGCTCATATC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAGGAAAGATTTAGTCTaGATTGGCTTTGAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCRKDLV*IGFEGD
Trigger: GTCACCCTCAAAGCCAATGCAGACTAAATCTTTCCT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAACACAAATCACCCGTTaGCTAGATTCAGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISTQITR*LDSVSM
Trigger: CATGGAAACTGAATCTAGGCAACGGGTGATTTGTGT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCCCCAGAGCTAAACTaGAACTTGGAATGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASPELN*NLECRD
Trigger: GTCCCTGCATTCCAAGTTGCAGTTTAGCTCTGGGGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTGTGGACAAAACAGCTaGCAGCATGATAGTGTTTGT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLCGQNS*QHDSVC
Trigger: ACAAACACTATCATGCTGGCAGCTGTTTTGTCCACA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGGTGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GKQREYVTFNIIVPFCVGGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...ACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGGGTGTTCTTTTGAATaGACTGACATTAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISGCSFE*TDIRCW
Trigger: CCAGCATCTAATGTCAGTCCATTCAAAAGAACACCC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGGTTTCCAGCTCGGGAGACAACTGACTTaGCCACATCCTTCACAAACA +
Preference number: 4 (lower is better)
Translates to: REYVTFNIIVPFCVGFQLGRQLT*PHPSQT
Trigger: TGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCC...GAGCTGGAAACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTACCTTAGAGGTTATCTaGTCCAACATCTTCAGAGGA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCTLEVI*SNIFRG
Trigger: TCCTCTGAAGATGTTGGACCAGATAACCTCTAAGGT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATAAGAAAAGAGATTTaGGGCTGTTGGATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHIRKEI*GCWIQQ
Trigger: TTGCTGAATCCAACAGCCCCAAATCTCTTTTCTTAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCTGAACATTGCTGGTTaGCCCTTAGACCATTTTGTT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCLNIAG*PLDHFV
Trigger: AACAAAATGGTCTAAGGGCCAACCAGCAATGTTCAG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTCACTGAACATTGCTaGTTGGCCCTTAGACCATTT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISFTEHC*LALRPF
Trigger: AAATGGTCTAAGGGCCAACCAGCAATGTTCAGTGAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGCTCAAGCAATCCTCTaGCTTCACCTTCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEAQAIL*LHLPKC
Trigger: ACACTTGGGAAGGTGAAGCCAGAGGATTGCTTGAGC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGCTCAAGCAATCCTCTaGCTTCACCTTCCCAAGTGT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAAQAIL*LHLPKC
Trigger: ACACTTGGGAAGGTGAAGCCAGAGGATTGCTTGAGC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGGTTCTAGATTGCTTTaGTTTCCACATGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHGSRLL*FPHETF
Trigger: AAAAGTCTCATGTGGAAACCAAAGCAATCTAGAACC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGGATCTCCTTGTATCTaGTTCCATCTCCCCTCATTT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEGSPCI*FHLPSF
Trigger: AAATGAGGGGAGATGGAACCAGATACAAGGAGATCC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: TDLATSFTNTCITTFYSKFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...TTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAAGTCACTAGGTATCTaGATGAAGGTCGCTGGACTC +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDKSLGI*MKVAGL
Trigger: GAGTCCAGCGACCTTCATTCAGATACCTAGTGACTT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCCCTTCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLPFSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGAAGGG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCCCTTCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCPFSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGAAGGG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAAAGTCTTCCTTGACTTaGGATTTTTCTTGGTCTGTA +
Preference number: 4 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIKSSLT*DFSWSV
Trigger: TACAGACCAAGAAAAATCTCAAGTCAAGGAAGACTT...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GTGAAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTACCGCAAGTCTTCCTTaGCTTGAGATTTTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VKALGKQREYVTFNIIVPTASLP*LEIFLG
Trigger: ACCAAGAAAAATCTCAAGTCAAGGAAGACTTGCGGT...AGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGTTAAAAATGGAGCATaGAAGGAGCTGGGAGCTTTA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEVKNGA*KELGAL
Trigger: TAAAGCTCCCAGCTCCTTTCATGCTCCATTTTTAAC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTATTTGGACACTTCTaGTATGAGCCATTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISLFGHF*YEPFLP
Trigger: AGGCAGAAATGGCTCATATCAGAAGTGTCCAAATAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTTATTTGGACACTTCTaGTATGAGCCATTTCTGCCT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCLFGHF*YEPFLP
Trigger: AGGCAGAAATGGCTCATATCAGAAGTGTCCAAATAA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCAAGTCAAACAGACTTaGTCTGTCCTTTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLQVKQT*SVLSKR
Trigger: TCTTTTGGAAAGGACAGATCAAGTCTGTTTGACTTG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTATCTCTGTTTTTCTCTaGAGCGTTGTCACACAATCT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLISVFL*SVVTQS
Trigger: AGATTGTGTGACAACGCTTCAGAGAAAAACAGAGAT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACTGTGGTCTATTTATTaGCCACACCTTATAAACAGG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISLWSIY*PHLINR
Trigger: CCTGTTTATAAGGTGTGGTCAATAAATAGACCACAG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCTGTGGTCTATTTATTaGCCACACCTTATAAACAGG +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLLWSIY*PHLINR
Trigger: CCTGTTTATAAGGTGTGGTCAATAAATAGACCACAG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCTGGAACACGGACATaGACAGTAAGTGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESGTRT*TVSETF
Trigger: GAAAGTTTCACTTACTGTTCATGTCCGTGTTCCAGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCCTGTGTCTGGTGACTaGGACTTCAAATTTTGCACC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAPVSGD*DFKFCT
Trigger: GGTGCAAAATTTGAAGTCTCAGTCACCAGACACAGG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAGAACCTGTGTCTGGTaGCTGAGACTTCAAATTTTG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLERTCVW*LRLQIL
Trigger: CAAAATTTGAAGTCTCAGTCACCAGACACAGGTTCT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAATGCGGTGTTTTATTTaGCCCACATCCTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEMRCFI*PTSSFL
Trigger: AAGGAAAGAGGATGTGGGTCAAATAAAACACCGCAT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CCAGGTATGTGGGTTTCATACCTTGACTTGGGTGTTCTTTTGAATGGACTGACATTAAACTCTGTTTGCTaGCCAGCAAAATGGATCATT +
Preference number: 4 (lower is better)
Translates to: PGMWVSYLDLGVLLNGLTLNSVC*PAKWII
Trigger: AATGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...TGTCAGTCCATTCAAAAGAACACCCAAGTCAAGGTATGAAACCCACATACCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTTTGCCTGCTTACATaGAGTGTTGTTCATTGCAAG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISFCLLT*SVVHCK
Trigger: CTTGCAATGAACAACACTGCATGTAAGCAGGCAAAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGTGACAGCATTATTGTaGTTGAGCCAAAAAGGAAGA +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISVTALL*LSQKGR
Trigger: TCTTCCTTTTTGGCTCAAGCACAATAATGCTGTCAC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGTCTTGGACATTGAGTaGTCAGTCACTGTCTCAGTG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAVLDIE*SVTVSV
Trigger: CACTGAGACAGTGACTGAGCACTCAATGTCCAAGAC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCACACAATCTCATGTaGTCACTGCTTCAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASHNLM*SLLQAK
Trigger: CTTGGCCTGAAGCAGTGAGCACATGAGATTGTGTGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTAGGGAAATTTTGTCTTaGAATCATAGGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLREILS*NHRKGG
Trigger: TCCACCCTTCCTATGATTGCAAGACAAAATTTCCCT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAGACTCAGTTTCATCTaGATAGTTTCGAGGGACTTT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCRLSFI*IVSRDF
Trigger: AAAGTCCCTCGAAACTATGCAGATGAAACTGAGTCT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAACCAATCAACATCCATaGGGTGTTTTATTTGACCCA +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISTNQHP*GVLFDP
Trigger: TGGGTCAAATAAAACACCGCATGGATGTTGATTGGT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGGTTTGCAGCGAACCTaGACAAGGTATTTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEGLQRT*TRYFCP
Trigger: AGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCACGTTTTTAGCATGTaGATCTGGCACCAACACCAG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAHVFSM*IWHQHQ
Trigger: CTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATGGTGGGGCCTCTTTaGCTGATTCTTCAAAGCAAG +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEMVGPL*LILQSK
Trigger: CTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCTGGAATCAGCTGCTaGAGAAAGAGGCAAGTGGTT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASGISC*RKRQVV
Trigger: AACCACTTGCCTCTTTCTCCAGCAGCTGATTCCAGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGTAATCCTAATAAAATaGACGAGGAGTGTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHVILIK*TRSVKV
Trigger: AACCTTTACACTCCTCGTCCATTTTATTAGGATTAC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCAGTTGCTATCAATATaGGATAGTTGGGGTGGAATA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCQLLSI*DSWGGI
Trigger: TATTCCACCCCAACTATCCCATATTGATAGCAACTG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGCAAATGATGGGCAGTaGTGGACACTTGAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDANDGQ*WTLEER
Trigger: TCTTTCCTCAAGTGTCCACCACTGCCCATCATTTGC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTCTTGTGGATCCTATaGTTGCTACTAACTCTTAGG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISFLWIL*LLLTLR
Trigger: CCTAAGAGTTAGTAGCAACCATAGGATCCACAAGAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTGTCAGATGGGATTCTaGCAAGATGTGGCAATATTT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLCQMGF*QDVAIF
Trigger: AAATATTGCCACATCTTGCCAGAATCCCATCTGACA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEPVVSQ*IIGRKS
Trigger: GGACTTCCTACCAATTATTCACTGACTTACCACAGG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCAGTGTTCGCCTCCATaGATAGGAGAGTTCTTTAGT +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDQCSPP*IGEFFS
Trigger: ACTAAAGAACTCTCCTATTCATGGAGGCGAACACTG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR TCA 90 bp GTGAAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTGTCACCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: VKALGKQREYVTFNIIVPVTSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGGTGAC...AGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR TCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAAATACTGTACCCACTaGATACATAAACAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCKYCTH*IHKQLY
Trigger: GTACAGCTGTTTATGTATTCAGTGGGTACAGTATTT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCTCATTACCTTACTCTaGCCTTTGGAGCTATTCCCA +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYALITLL*PLELFP
Trigger: TGGGAATAGCTCCAAAGGTCAGAGTAAGGTAATGAG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACTCATTACCTTACTCTaGCCTTTGGAGCTATTCCCA +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDELITLL*PLELFP
Trigger: TGGGAATAGCTCCAAAGGTCAGAGTAAGGTAATGAG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATTTAACTCCCAGAGGTaGGCTCAAGTTCTCTATGTC +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEFNSQR*AQVLYV
Trigger: GACATAGAGAACTTGAGCTCACCTCTGGGAGTTAAA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGAGGATTTAGGGGACTaGATGAGCTTGGACAACTTT +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDEDLGD*MSLDNF
Trigger: AAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCCTC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGGATTCAGCAAGGAATaGGCATGGCTTGATTCAGTA +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAGFSKE*AWLDSV
Trigger: TACTGAATCAAGCCATGCTCATTCCTTGCTGAATCC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAACACATCTGTTAGAATaGATTGGAACATCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISTHLLE*IGTSCC
Trigger: ACAGCAAGATGTTCCAATTCATTCTAACAGATGTGT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATCTTTTGTACTTAAGTaGCTACCAGGATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSFVLK*LPGLVL
Trigger: TAAGACCAATCCTGGTAGTCACTTAAGTACAAAAGA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAACTATAAGCAGCTTTaGAGGAAGGACATTAGGACA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLENYKQL*RKDIRT
Trigger: TGTCCTAATGTCCTTCCTTCAAAGCTGCTTATAGTT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAACTAAGTATTCTTTCTaGATCTTTCTTGCAGCCGGT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLETKYSF*IFLAAG
Trigger: ACCGGCTGCAAGAAAGATTCAGAAAGAATACTTAGT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTTCTGGTAAATGGCTaGCTTTTCCCATATCATACT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISFLVNG*LFPYHT
Trigger: AGTATGATATGGGAAAAGTCAGCCATTTACCAGAAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AGAGATCCACACGGTTGTATCATTCATGGTGAAGTCACTAGGTATCTGAATGAAATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: RDPHGCIIHGEVTRYLNEILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...TTCATTCAGATACCTAGTGACTTCACCATGAATGATACAACCGTGTGGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGTAGTTCTTCAGACTTaGCCTTCTCCAACAGATGAG +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDVVLQT*PSPTDE
Trigger: CTCATCTGTTGGAGAAGGGCAAGTCTGAAGAACTAC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGCTGCCTTCTCTTGCTaGAGGAAATGTATCAGAAGT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAAAFSC*RKCIRS
Trigger: ACTTCTGATACATTTCCTGCAGCAAGAGAAGGCAGC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACGTATCTATTGCTTTTaGCATTCTCAAAACATTGGC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISRIYCF*HSQNIG
Trigger: GCCAATGTTTTGAGAATGGCAAAAGCAATAGATACG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGGAATTTTCAAACACTaGCCAGGTGATGCCTATGCA +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAGIFKH*PGDAYA
Trigger: TGCATAGGCATCACCTGGGCAGTGTTTGAAAATTCC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATGCAGTGTTGTTCATTaGAAGTCAAACAGACTTGAT +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISCSVVH*KSNRLD
Trigger: ATCAAGTCTGTTTGACTTGCAATGAACAACACTGCA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTTTGCCTGCTTACATaGAGTGTTGTTCATTGCAAG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEFCLLT*SVVHCK
Trigger: CTTGCAATGAACAACACTGCATGTAAGCAGGCAAAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACACATTCACTGAACATTaGTGGTTGGCCCTTAGACCA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDTFTEH*WLALRP
Trigger: TGGTCTAAGGGCCAACCAGCAATGTTCAGTGAATGT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATACAAAGTTCCAATGTaGATGCATTGTTCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISYKVPM*MHCSLQ
Trigger: CTGAAGAGAACAATGCATGCACATTGGAACTTTGTA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAGGGAAATTTTGTCTTaGAATCATAGGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEREILS*NHRKGG
Trigger: TCCACCCTTCCTATGATTGCAAGACAAAATTTCCCT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCATTGCAAAAGCATTTaGTCTGAAAAGGGACTGAAA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCHCKSI*SEKGLK
Trigger: TTTCAGTCCCTTTTCAGAGCAAATGCTTTTGCAATG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAAACTGCTTCCCATCTaGTTAGTGGCATTGACCATC +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDKLLPI*LVALTI
Trigger: GATGGTCAATGCCACTAACCAGATGGGAAGCAGTTT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGGGTTTTCTGTCTTCTaGCTGTTTTACTTCCACAGC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAGFSVF*LFYFHS
Trigger: GCTGTGGAAGTAAAACAGCCAGAAGACAGAAAACCC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTTTAGCATGTGGATCTaGCACCAACACCAGGATGTT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAFSMWI*HQHQDV
Trigger: AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACACTTCAGGGTTCATGTaGAAAGCATCCTCAGTGTTC +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDTSGFM*KASSVF
Trigger: GAACACTGAGGATGCTTTCCACATGAACCCTGAAGT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACAGGATCCAGGTATGTaGGTTTCATACCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEQDPGM*VSYLDL
Trigger: CAAGTCAAGGTATGAAACCCACATACCTGGATCCTG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTGTTTCAGGATTCTCTaGCTTCTCAATGACCTCAGG +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDCFRIL*LLNDLR
Trigger: CCTGAGGTCATTGAGAAGCCAGAGAATCCTGAAACA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAAGAGGATATACCTATTaGCATTGTCCCTCAAGAATA +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISRGYTY*HCPSRI
Trigger: TATTCTTGAGGGACAATGCCAATAGGTATATCCTCT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATCAATATGGGATAGTTaGGGTGGAATATTTAACTCC +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSIWDS*GGIFNS
Trigger: GGAGTTAAATATTCCACCCCAACTATCCCATATTGA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTATAAGAAAAGAGATTTaGGGCTGTTGGATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCIRKEI*GCWIQQ
Trigger: TTGCTGAATCCAACAGCCCCAAATCTCTTTTCTTAT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATCTGTTAGAATGAATTaGAACATCTTGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSVRMN*NILLFR
Trigger: CCTGAACAGCAAGATGTTCCAATTCATTCTAACAGA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTCTCAAATCACAGGGTaGCAGGTTTATCCCCAAATC +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSQITG*QVYPQI
Trigger: GATTTGGGGATAAACCTGCCACCCTGTGATTTGAGA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTACGTTAGCAATGCTTaGGATGGTAATTCAAAGTCA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLYVSNA*DGNSKS
Trigger: TGACTTTGAATTACCATCCCAAGCATTGCTAACGTA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAGATGCCCAAATCTCTaGAAACTTCCTATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLERCPNL*KLPISC
Trigger: ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGTCAGTAATGCCACTTaGCAAATACATCAAATATGC +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCVSNAT*QIHQIC
Trigger: GCATATTTGATGTATTTGCCAAGTGGCATTACTGAC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGGTTCTAGATTGCTTTaGTTTCCACATGAGACTTTT +
Preference number: 4 (lower is better)
Translates to: AFHGILRCPNLWKLPISCGSRLL*FPHETF
Trigger: AAAAGTCTCATGTGGAAACCAAAGCAATCTAGAACC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp GAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EGVCYIQYNCPF*CGFPAPSQFCF
Trigger: AAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
3UTR CAA 72 bp TTGTCATTCACTTCATATTTCACAGTGGGCTTTGGGTaGGTATGGCATTTTACTCCACAAACGGGAACTTTA +
Preference number: 4 (lower is better)
Translates to: LSFTSYFTVGFG*VWHFTPQTGTL
Trigger: TAAAGTTCCCGTTTGTGGAGTAAAATGCCATACCAACCCAAAGCCCACTGTGAAATATGAAGTGAATGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCTTTTGTACTTAAGTaGCTACCAGGATTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESFVLK*LPGLVL
Trigger: TAAGACCAATCCTGGTAGTCACTTAAGTACAAAAGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAAACCAGTCAAAGCATaGGACATGACATCTTTCATT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEKPVKA*DMTSFI
Trigger: AATGAAAGATGTCATGTCTCATGCTTTGACTGGTTT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCTGGAACACGGACATaGACAGTAAGTGAAACTTTC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASGTRT*TVSETF
Trigger: GAAAGTTTCACTTACTGTTCATGTCCGTGTTCCAGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATGCGGTGTTTTATTTaGCCCACATCCTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEMRCFI*PTSSFL
Trigger: AAGGAAAGAGGATGTGGGTCAAATAAAACACCGCAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYALNSVC*PAKWIS
Trigger: GGAGATCCATTTTGCTGGGCAGCAAACAGAGTTTAA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATTTCCGTCTGTCCCATaGCAAATCATGAAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEFPSVP*QIMKAF
Trigger: AAAGGCTTTCATGATTTGGCATGGGACAGACGGAAA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCACATGAAATTCATTTaGCCCTTGTGTAAGAACATT +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLHMKFI*PLCKNI
Trigger: AATGTTCTTACACAAGGGGCAAATGAATTTCATGTG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGATATGAGCCATTTCTaGCTCTGCCAAGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYADMSHF*LCQDFA
Trigger: TGCAAAATCTTGGCAGAGGCAGAAATGGCTCATATC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAGGAAAGATTTAGTCTaGATTGGCTTTGAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYARKDLV*IGFEGD
Trigger: GTCACCCTCAAAGCCAATGCAGACTAAATCTTTCCT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCACACAAATCACCCGTTaGCTAGATTCAGTTTCCATG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYATQITR*LDSVSM
Trigger: CATGGAAACTGAATCTAGGCAACGGGTGATTTGTGT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCATGGAATCCTGAGATaGCCAAATCTCTGGAAACTT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAHGILR*PNLWKL
Trigger: AAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCAAATACATCAAATATaGCACCGAAAACCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLQIHQI*HRKPVK
Trigger: TTTGACTGGTTTTCGGTGGCATATTTGATGTATTTG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAATCCAGCCTCATTATaGAAAGAACACTTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLENPASL*KEHLRS
Trigger: ACTTCTCAAGTGTTCTTTGCATAATGAGGCTGGATT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACATTGCAAAAGCATTTaGTCTGAAAAGGGACTGAAA +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEHCKSI*SEKGLK
Trigger: TTTCAGTCCCTTTTCAGAGCAAATGCTTTTGCAATG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGAGGGTGACTGTCTTTaGTTAATGTCTCTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDEGDCL*LMSLKV
Trigger: TACCTTGAGAGACATTAACCAAAGACAGTCACCCTC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGAGGGTGACTGTCTTTaGTTAATGTCTCTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAEGDCL*LMSLKV
Trigger: TACCTTGAGAGACATTAACCAAAGACAGTCACCCTC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACTTTTCACATTCAGCTaGGTCATCACAAGACACAGA +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDELFTFS*VITRHR
Trigger: TCTGTGTCTTGTGATGACCCAGCTGAATGTGAAAAG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAGTCTCAGCATTTCATaGAATCCTGAGATGCCCAAA +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDESLSIS*NPEMPK
Trigger: TTTGGGCATCTCAGGATTCCATGAAATGCTGAGACT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp CATGAAAGCCTTTTCCAGAGGATATACCTATTGGCATaGTCCCTCAAGAATACTAAGCAGTGTGCTTTTATT +
Preference number: 4 (lower is better)
Translates to: HESLFQRIYLLA*SLKNTKQCAFI
Trigger: AATAAAAGCACACTGCTTAGTATTCTTGAGGGACAATGCCAATAGGTATATCCTCTGGAAAAGGCTTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTTTCATACAGGAGCGTaGACCAACCAGTTTTTAAGT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAFHTGA*TNQFLS
Trigger: ACTTAAAAACTGGTTGGTTCACGCTCCTGTATGAAA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp CTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGCCCTTCTCCAACAGATaGGCATCAAATCCTTTTATT +
Preference number: 4 (lower is better)
Translates to: LGKQREYVTFNIIVPFCVPFSNR*ASNPFI
Trigger: AATAAAAGGATTTGATGCTCATCTGTTGGAGAAGGG...CACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCAAGTCAAACAGACTTaGTCTGTCCTTTCCAAAAGA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDQVKQT*SVLSKR
Trigger: TCTTTTGGAAAGGACAGATCAAGTCTGTTTGACTTG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACAGCATTATTGTGCTTaGGCCAAAAAGGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEQHYCA*AKKEEK
Trigger: CTTTTCTTCCTTTTTGGCTCAAGCACAATAATGCTG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCAGCATTATTGTGCTTaGGCCAAAAAGGAAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAQHYCA*AKKEEK
Trigger: CTTTTCTTCCTTTTTGGCTCAAGCACAATAATGCTG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGATGTTAAATCAATCTaGGTTGGAGGAACAGATCTC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYADVKSI*VGGTDL
Trigger: GAGATCTGTTCCTCCAACTCAGATTGATTTAACATC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAACTATAAGCAGCTTTaGAGGAAGGACATTAGGACA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDNYKQL*RKDIRT
Trigger: TGTCCTAATGTCCTTCCTTCAAAGCTGCTTATAGTT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp AAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: KALGKQREYVTFNIIVPFILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...AAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCATCTTAAACTCTGTTTaGTGCCCAGCAAAATGGATC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAILNSV*CPAKWI
Trigger: GATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGAT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGCATTATTTCTTACTTaGATATCAGCAATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEALFLT*ISAMCQ
Trigger: CTGACACATTGCTGATATGCAAGTAAGAAATAATGC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACACCAATCAACATCCATaGGGTGTTTTATTTGACCCA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDTNQHP*GVLFDP
Trigger: TGGGTCAAATAAAACACCGCATGGATGTTGATTGGT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAAATCCTTTTATTTTTaGCCCAGGAACTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAKSFYF*PRNWRK
Trigger: TTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAACTGACATTAGATGCTaGTCCTCACTATCATCTACT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDETDIRC*SSLSST
Trigger: AGTAGATGATAGTGAGGACCAGCATCTAATGTCAGT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACAGTTGCTATCAATATaGGATAGTTGGGGTGGAATA +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEQLLSI*DSWGGI
Trigger: TATTCCACCCCAACTATCCCATATTGATAGCAACTG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAACTTCACTTCAATATaGCTTTACAGAAGACACAGT +
Preference number: 4 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLENFTSI*LYRRHS
Trigger: ACTGTGTCTTCTGTAAAGCCATATTGAAGTGAAGTT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATGTCAGATGGGATTCTaGCAAGATGTGGCAATATTT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDECQMGF*QDVAIF
Trigger: AAATATTGCCACATCTTGCCAGAATCCCATCTGACA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCAGCCCCAAAGAAACTaGGGAGATTTAGAATGTATA +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAQPQRN*GDLECI
Trigger: TATACATTCTAAATCTCCCCAGTTTCTTTGGGGCTG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp TCTCAAGGTAGATTATATTCCTTGGCCTTTCAGAAGTaGTGCGTAGTTTTGCAGGTCATTCTTTTATGTGAA +
Preference number: 4 (lower is better)
Translates to: SQGRLYSLAFQK*CVVLQVILLCE
Trigger: TTCACATAAAAGAATGACCTGCAAAACTACGCACAACTTCTGAAAGGCCAAGGAATATAATCTACCTTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
3UTR CAA 72 bp TCTAAATGGGATATACTTGTGATCTTCAACTTGGCCTaGGATATCTGTGTGACTGATTTAACCTTTGACTCA +
Preference number: 4 (lower is better)
Translates to: SKWDILVIFNLA*DICVTDLTFDS
Trigger: TGAGTCAAAGGTTAAATCAGTCACACAGATATCCAAGGCCAAGTTGAAGATCACAAGTATATCCCATTTAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAAATACTGTACCCACTaGATACATAAACAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAKYCTH*IHKQLY
Trigger: GTACAGCTGTTTATGTATTCAGTGGGTACAGTATTT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCACACATCTGTTAGAATaGATTGGAACATCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYATHLLE*IGTSCC
Trigger: ACAGCAAGATGTTCCAATTCATTCTAACAGATGTGT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAAACCAGTCAAAGCATaGGACATGACATCTTTCATT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEKPVKA*DMTSFI
Trigger: AATGAAAGATGTCATGTCTCATGCTTTGACTGGTTT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR TCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTTTCTGGTAAATGGCTaGCTTTTCCCATATCATACT +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDFLVNG*LFPYHT
Trigger: AGTATGATATGGGAAAAGTCAGCCATTTACCAGAAA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATTCCATTAGCATCCTaGTGTGGTTTTCTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEIPLAS*CGFLFK
Trigger: CTTGAAAAGAAAACCACAGCAGGATGCTAATGGAAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCATTCCATTAGCATCCTaGTGTGGTTTTCTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAIPLAS*CGFLFK
Trigger: CTTGAAAAGAAAACCACAGCAGGATGCTAATGGAAT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCGTATCTATTGCTTTTaGCATTCTCAAAACATTGGC +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDRIYCF*HSQNIG
Trigger: GCCAATGTTTTGAGAATGGCAAAAGCAATAGATACG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGAGCTTCGTATCTATTaGTTTTGCCATTCTCAAAAC +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEELRIY*FCHSQN
Trigger: GTTTTGAGAATGGCAAAAGCAATAGATACGAAGCTC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTTTGACTCAGTCTTTTaGAGTGCCAAAGTCATTGTT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAFDSVF*SAKVIV
Trigger: AACAATGACTTTGGCACTGCAAAAGACTGAGTCAAA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCATAATGATTTGTTCTaGAATCAGCTGCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDHNDLF*NQLLEK
Trigger: TTTCTCCAGCAGCTGATTCCAGAACAAATCATTATG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCTGTTAGAATGAATTaGAACATCTTGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASVRMN*NILLFR
Trigger: CCTGAACAGCAAGATGTTCCAATTCATTCTAACAGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACAGAATTAAAGGCAGTTaGCTTCAATATAAGCACAGG +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDRIKGS*LQYKHR
Trigger: CCTGTGCTTATATTGAAGCCAACTGCCTTTAATTCT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGCATTATTTCTTACTTaGATATCAGCAATGTGTCAG +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAALFLT*ISAMCQ
Trigger: CTGACACATTGCTGATATGCAAGTAAGAAATAATGC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCCACATGAAATTCATTTaGCCCTTGTGTAAGAACATT +
Preference number: 4 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAHMKFI*PLCKNI
Trigger: AATGTTCTTACACAAGGGGCAAATGAATTTCATGTG...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR GCA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCAAATACATCAAATATaGCACCGAAAACCAGTCAAA +
Preference number: 4 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDQIHQI*HRKPVK
Trigger: TTTGACTGGTTTTCGGTGGCATATTTGATGTATTTG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CCA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATAAGCTTCTCTTATTaGATCTCCTTGTATCTGGTT +
Preference number: 4 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEISFSY*ISLYLV
Trigger: AACCAGATACAAGGAGATCCAATAAGAGAAGCTTAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CAGACAAAAGGGAAGGGCTGTCACAGCTCCCCCGGCCTGAGTCAGTGTCAGGATACCAACACCAGGATGTaGTTATCCATGACCCCGGAC +
Preference number: 5 (lower is better)
Translates to: QTKGKGCHSSPGLSQCQDTNTRM*LSMTPD
Trigger: GTCCGGGGTCATGGATAACAACATCCTGGTGTTGGT...ATCCTGACACTGACTCAGGCCGGGGGAGCTGTGACAGCCCTTCCCTTTTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CAA 90 bp CAGACAAAAGGGAAGGGCTGTCACAGCTCCCCCGGCCTGAGTCAGTGTCAGGATGATGTTGCAGTGAAGTaGGCCAGGGCTTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: QTKGKGCHSSPGLSQCQDDVAVK*ARAFSA
Trigger: AGCTGAGAAAGCCCTGGCCAACTTCACTGCAACATC...ATCCTGACACTGACTCAGGCCGGGGGAGCTGTGACAGCCCTTCCCTTTTGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CAA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGGGAGTCCCGGGCTTCTaGGGCTTGCCGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: VSMVWFAANLDKVFLSWMGVPGF*GLPLFS
Trigger: AGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCC...CATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CAA 90 bp GTGAAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGGAGTCCCGGGCTTCTaGGGCTTGCCGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: VKGVCKTCGIQVIQTTQLGVPGF*GLPLFS
Trigger: AGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCC...CAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCAGTGGGAGGAAAGTCTaGGCATCCCAAGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPSGRKV*ASQGTQ
Trigger: CTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACT...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CAA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACACCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGAGTCCCGGGCTTCTaGGGCTTGCCGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: GASLADSSKQATFLACGSGVPGF*GLPLFS
Trigger: AGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCC...AGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS CCA 90 bp CTGCTTGCCAAAGTGGCAGGAGTTGGGGCCACCGGTTATGTAGTCTaGACATTCATGCATGAGTGTCTCTCCTTCCCTGTGGTAAGTCAG +
Preference number: 5 (lower is better)
Translates to: LLAKVAGVGATGYVV*TFMHECLSFPVVSQ
Trigger: CTGACTTACCACAGGGAAGGAGAGACACTCATGCATGAATGTCCAGACTACATAACCGGTGGCCCCAACTCCTGCCACTTTGGCAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000231423.7
ENST00000310101.9
ENST00000348262.7
ENST00000503330.5
ENST00000509140.5
ENST00000509839.5
ENST00000509934.1
ENST00000513753.5
ENST00000514088.5
ENST00000514206.5
ENST00000542609.5
ENST00000618457.5
ENST00000619676.4
CDS-3UTR CAA 90 bp ATGAAGGTCGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: MKVAGLHALQYPWSGLQRMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...TCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CAA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: DHVLYMAVPKGDSDKADCYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...GCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: LPVNSALGAVGSDHMSWLQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...CAGCCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: GTTCFTWQCLRGTVTKLIPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...AATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: LGFPLLQNGGPRALHGSARETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGGTTGGCTGCCTTCTCTaGCTGCAGGAAATGTATCAG +
Preference number: 5 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKVGCLL*LQEMYQ
Trigger: CTGATACATTTCCTGCAGCAAGAGAAGGCAGCCAAC...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS GCA 90 bp AGGTCACCATGCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATaGACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAG +
Preference number: 5 (lower is better)
Translates to: RSPCTRYLNEGRWTP*TPVSMVWFAANLDK
Trigger: CTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGCATGGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509934.1
CDS CCA 90 bp CTGCTTGCCAAAGTGGCAGGAGTTGGGGCCACCGGTTATGTAGTCTaGACATTCATGCATGAGTGTCTCTCATTCAGAAGGCAGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LLAKVAGVGATGYVV*TFMHECLSFRRQVL
Trigger: CAACACCTGCCTTCTGAATGAGAGACACTCATGCATGAATGTCCAGACTACATAACCGGTGGCCCCAACTCCTGCCACTTTGGCAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CAA 90 bp TTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTTTCAGAAGGCAGGTGTaGAGAAAAAGTAGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LGAVGSDHMSWLVTCCRSFRRQV*RKSSRV
Trigger: CACTCTGCTACTTTTTCTCAACACCTGCCTTCTGAA...ACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTAGTGGGAGGAAAGTCTaGGCATCCCAAGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRSGRKV*ASQGTQ
Trigger: CTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACT...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAAGTGGGAGGAAAGTCTaGGCATCCCAAGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGSGRKV*ASQGTQ
Trigger: CTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACT...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CAA 90 bp ACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAAGGGGTCACCTTGACTaGGGTGTTCTTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: TASEWGTTCFTWQCLRGTRGHLD*GVLLNG
Trigger: TCCATTCAAAAGAACACCCAAGTCAAGGTGACCCCT...TGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CAA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: PGCEEYISSRFPTASEWGQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: CEEYISSRFPTASEWGTTQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...CGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: FCVGFQLPVNSALGAVGSQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...ACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTCCGGGCTTCTTGGGCTaGCCGCTGTTCTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVPGFLG*PLFSLL
Trigger: CAAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGG...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp TCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCCCGGGCTTCTTGGGCTaGCCGCTGTTCTCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: SLADSSKQATFLACGSGTPGFLG*PLFSLL
Trigger: CAAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGG...GGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp ATGAAGGTCGCTGGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAATGACCCCGGACACCTaGGCATACTCCTTATTGTTC +
Preference number: 5 (lower is better)
Translates to: MKVAGLHALQYPWSGLQRMTPDT*AYSLLF
Trigger: GAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCAT...TCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CAA 90 bp CCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGGTTGGCTGCCTTCTCTaGCTGCAGGAAATGTATCAG +
Preference number: 5 (lower is better)
Translates to: PFCVGFQLPVNSALGAVGVGCLL*LQEMYQ
Trigger: CTGATACATTTCCTGCAGCAAGAGAAGGCAGCCAAC...CCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CAA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACCCGGGCTTCTTGGGCTaGCCGCTGTTCTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LADSSKQATFLACGSGTNPGFLG*PLFSLC
Trigger: ACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGG...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS CCA 90 bp GAAAGATGCAGGTCACCATGCACTAGGTATCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTATCCATGGTCTGGTTTGCAGCGAAC +
Preference number: 5 (lower is better)
Translates to: ERCRSPCTRYLNEGR*TPCTPVSMVWFAAN
Trigger: GTTCGCTGCAAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGCATGGTGACCTGCATCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509934.1
CDS-3UTR CAA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: ILGHPVRETTDLATSFTNMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGAATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp ATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: IATRGSRDWGWVDIINLGMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...CCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGTGAAGTCACTAGGTATCTGAATGAAGGTCGCTGGACTCCATGCACTCCAGTATATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: GEVTRYLNEGRWTPCTPVYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...TACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGACTTCACC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGGGCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: GAVGSDHMSWLVTCCRSNQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...ATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp AGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCAAGTGGGAGGAAAGTCTaGGCATCCCAAGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: SDGGASLADSSKQATFLASGRKV*ASQGTQ
Trigger: CTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACT...TGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAAGGGGTCACCTTGACTaGGGTGTTCTTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPRGHLD*GVLLNG
Trigger: TCCATTCAAAAGAACACCCAAGTCAAGGTGACCCCT...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CAA 90 bp ATCATGATGTATGTCCTCCACATGGAGGTGTACTGCTTGCCAAAGTGGCAGGAGCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: IMMYVLHMEVYCLPKWQEPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...CTCCTGCCACTTTGGCAAGCAGTACACCTCCATGTGGAGGACATACATCATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CAA 90 bp GGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: GSRDWGWVDIINLGSPCKRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...CTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGGAGTCCCGGGCTTCTaGGGCTTGCCGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLGVPGF*GLPLFS
Trigger: AGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGGAGTCCCGGGCTTCTaGGGCTTGCCGCTGTTCTCT +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCGVPGF*GLPLFS
Trigger: AGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTACCAACACCAGGATGTaGTTATCCATGACCCCGGAC +
Preference number: 5 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRTNTRM*LSMTPD
Trigger: GTCCGGGGTCATGGATAACAACATCCTGGTGTTGGT...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCGATGTTGCAGTGAAGTaGGCCAGGGCTTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLDVAVK*ARAFSA
Trigger: AGCTGAGAAAGCCCTGGCCAACTTCACTGCAACATC...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGAGCTGGAGCCTGCACTaGCTTGATGTTGCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLESWSLH*LDVAVK
Trigger: CTTCACTGCAACATCAAGCAAGTGCAGGCTCCAGCT...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAGCTGGAGCCTGCACTaGCTTGATGTTGCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLSWSLH*LDVAVK
Trigger: CTTCACTGCAACATCAAGCAAGTGCAGGCTCCAGCT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGAAAGTCTTGGCATCCCAAGGCACTCAGTAGTTCTTCAGACTTGCCCTTCTCCGGACATGAAGCTCCATaGTGTGGAAAGCTGTTTCGC +
Preference number: 5 (lower is better)
Translates to: GKSWHPKALSSSSDLPFSGHEAP*CGKLFR
Trigger: GCGAAACAGCTTTCCACACAATGGAGCTTCATGTCC...GGAGAAGGGCAAGTCTGAAGAACTACTGAGTGCCTTGGGATGCCAAGACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CAA 90 bp GGAAAGTCTTGGCATCCCAAGGCACTCAGTAGTTCTTCAGACTTGCCCTTCTCCGTTGGCTGCCTTCTCTaGCTGCAGGAAATGTATCAG +
Preference number: 5 (lower is better)
Translates to: GKSWHPKALSSSSDLPFSVGCLL*LQEMYQ
Trigger: CTGATACATTTCCTGCAGCAAGAGAAGGCAGCCAAC...GGAGAAGGGCAAGTCTGAAGAACTACTGAGTGCCTTGGGATGCCAAGACTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS TCA 90 bp CAAAGTCTGCCACATCAGTCGATGAGTACTTCCTGCACGAGGACATaGAGCTCCATTGTGTGGAAAGCTGTTTCGCGAACGGTCGGTAAA +
Preference number: 5 (lower is better)
Translates to: QSLPHQSMSTSCTRT*SSIVWKAVSRTVGK
Trigger: TTTACCGACCGTTCGCGAAACAGCTTTCCACACAATGGAGCTTCATGTCCTCGTGCAGGAAGTACTCATCGACTGATGTGGCAGACTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504500.5
ENST00000508107.5
ENST00000515839.1
ENST00000618457.5
CDS TCA 90 bp TCCGTAAGACTTTTGCCAGGGAGCAAAGTCTGCCACATCAGTCGATaGGTACTTCCTGCACGAGGACATGAAGCTCCATTGTGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: SVRLLPGSKVCHISR*VLPARGHEAPLCGK
Trigger: CTTTCCACACAATGGAGCTTCATGTCCTCGTGCAGGAAGTACTCATCGACTGATGTGGCAGACTTTGCTCCCTGGCAAAAGTCTTACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504500.5
CDS-3UTR CAA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTTCAGAAGGCAGGTGTaGAGAAAAAGTAGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPFRRQV*RKSSRV
Trigger: CACTCTGCTACTTTTTCTCAACACCTGCCTTCTGAA...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGTTATCATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: ASHVFSMWIWHQHQDVVIMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...GATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: DSSKQATFLACGSGTNTRYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp CAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATGAGCTGGCAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: QLPVNSALGAVGSDHMSWQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...CCAGCTCATATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGTGGGAGGAAAGTCTaGGCATCCCAAGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQSGRKV*ASQGTQ
Trigger: CTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACT...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: QPGCEEYISSRFPTASEWQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: QPGCEEYISSRFPTASEWPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...CCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp ACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: TRGSRDWGWVDIINLGSPYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...GGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTCCCTCGACCCCCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGATGACCCCGGACACCTaGGCATACTCCTTATTGTTC +
Preference number: 5 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEMTPDT*AYSLLF
Trigger: GAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCAT...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGTTATCACCAACACCAGGATGTaGTTATCCATGACCCCGGAC +
Preference number: 5 (lower is better)
Translates to: ASHVFSMWIWHQHQDVVITNTRM*LSMTPD
Trigger: GTCCGGGGTCATGGATAACAACATCCTGGTGTTGGT...GATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCGATGGTGGGGCCTCTTaGGCTGATTCTTCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: GLQRTWTRYFCPGCRLRIDGGAS*ADSSKQ
Trigger: TTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATC...GATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CAA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGGATGGTGGGGCCTCTTaGGCTGATTCTTCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEDGGAS*ADSSKQ
Trigger: TTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATC...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGAGCTGGAGCCTGCACTaGCTTGATGTTGCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: DSSKQATFLACGSGTNTRSWSLH*LDVAVK
Trigger: CTTCACTGCAACATCAAGCAAGTGCAGGCTCCAGCT...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACGTTGGCTGCCTTCTCTaGCTGCAGGAAATGTATCAG +
Preference number: 5 (lower is better)
Translates to: ILGHPVRETTDLATSFTNVGCLL*LQEMYQ
Trigger: CTGATACATTTCCTGCAGCAAGAGAAGGCAGCCAAC...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAAGGAGATAGGGAAGTaGCTAAAGGCAGGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLKEIGK*LKAGPS
Trigger: ACTTGGCCCTGCCTTTAGCAACTTCCCTATCTCCTT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCTTCAGAAGGCAGGTGTaGAGAAAAAGTAGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GCEEYISSRFPTASEWGTFRRQV*RKSSRV
Trigger: CACTCTGCTACTTTTTCTCAACACCTGCCTTCTGAA...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAGGAGGTGAAGGCATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: HKHLHNNLLLQMPIGGEGMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...GCCTTCACCTCCTATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp GGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: GTTCFTWQCLRGTVTKLIIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...AATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: CFRMGDHVLYMAVPKGDSNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...ACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCCAGTCTGTCCTGTGGTaGGACAGAGGGGAGAAAATG +
Preference number: 5 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPQSVLW*DRGEKM
Trigger: CATTTTCTCCCCTCTGTCCAACCACAGGACAGACTG...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp AGATCCAACCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: RSNQVAKSTSLLGFPLLQRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...CTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGGTTGGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGATGTTGCAGTGAAGTaGGCCAGGGCTTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVDVAVK*ARAFSA
Trigger: AGCTGAGAAAGCCCTGGCCAACTTCACTGCAACATC...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACGATGTTGCAGTGAAGTaGGCCAGGGCTTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: LADSSKQATFLACGSGTNDVAVK*ARAFSA
Trigger: AGCTGAGAAAGCCCTGGCCAACTTCACTGCAACATC...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCGAGAGTTCTTTAGTTTaGCCAGGGAGCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: GLQRTWTRYFCPGCRLRIESSLV*PGSKVC
Trigger: GCAGACTTTGCTCCCTGGCAAAACTAAAGAACTCTC...GATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS TCA 90 bp AGTTCTTTAGTTTTGCCAGGGAGCAAAGTCTGCCACATCAGTCGATaGGTACTTCCTGCACGAGGACATGAAGCTCCATTGTGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: SSLVLPGSKVCHISR*VLPARGHEAPLCGK
Trigger: CTTTCCACACAATGGAGCTTCATGTCCTCGTGCAGGAAGTACTCATCGACTGATGTGGCAGACTTTGCTCCCTGGCAAAACTAAAGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618457.5
CDS TCA 90 bp CTTTTACAACTTTTGCCAGGGAGCAAAGTCTGCCACATCAGTCGATaGGTACTTCCTGCACGAGGACATGAAGCTCCATTGTGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: LLQLLPGSKVCHISR*VLPARGHEAPLCGK
Trigger: CTTTCCACACAATGGAGCTTCATGTCCTCGTGCAGGAAGTACTCATCGACTGATGTGGCAGACTTTGCTCCCTGGCAAAAGTTGTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515839.1
CDS-3UTR CAA 90 bp GTGAAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGTTCAGAAGGCAGGTGTaGAGAAAAAGTAGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: VKGVCKTCGIQVIQTTQLFRRQV*RKSSRV
Trigger: CACTCTGCTACTTTTTCTCAACACCTGCCTTCTGAA...CAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp CACTCCAGTATCCATGGTCTGGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCTTCAGAAGGCAGGTGTaGAGAAAAAGTAGCAGAGTG +
Preference number: 5 (lower is better)
Translates to: HSSIHGLVCSEPGQGISVFRRQV*RKSSRV
Trigger: CACTCTGCTACTTTTTCTCAACACCTGCCTTCTGAA...GACAGAAATACCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATACTGGAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397391.7
ENST00000508107.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CTAGGTTTCCCACTGCTTCAGAATGGGGGACCACGTGCTTTACATGGCAGTGCCGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: LGFPLLQNGGPRALHGSAVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...GGCACTGCCATGTAAAGCACGTGGTCCCCCATTCTGAAGCAGTGGGAAACCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CAA 90 bp GAATGGGGGACCACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: EWGTTCFTWQCLRGTVTKVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...CTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGTGGTCCCCCATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CAA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: GCEEYISSRFPTASEWGTIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGAGTGATCATAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: VGFQLPVNSALGAVGSDHNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...ATGATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CCCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: PFLCGFPAPSQFCFGGSRNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...CCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GCAGTAGGGAGTGATCATATGAGCTGGCTGGTCACGTGCTGCAGGAGTAATCCAAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: AVGSDHMSWLVTCCRSNPNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...TGGATTACTCCTGCAGCACGTGACCAGCCAGCTCATATGATCACTCCCTACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GTGACAAAGCTGATTGCAACTAGGGGGTCGAGGGACTGGGGATGGGTAGATATCAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: VTKLIATRGSRDWGWVDINLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...GATATCTACCCATCCCCAGTCCCTCGACCCCCTAGTTGCAATCAGCTTTGTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: LATSFTNTCITTFYSKCPYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...TGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GTTCCTGAATTCTGGTATATGCTCTTCAGCTCTACTGGACTGTGGTCAATGTTGTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: VPEFWYMLFSSTGLWSMLYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...CAACATTGACCACAGTCCAGTAGAGCTGAAGAGCATATACCAGAATTCAGGAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGTTTGCAGCGAACCTGGACAAGGTATTTCTGTCCTGGATGTAGGCTGAGAATCCAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: GLQRTWTRYFCPGCRLRIQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...GATTCTCAGCCTACATCCAGGACAGAAATACCTTGTCCAGGTTCGCTGCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAAGTGGGAGGAAAGTCTaGGCATCCCAAGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSGRKV*ASQGTQ
Trigger: CTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGATATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: QVAKSTSLLGFPLLQNGGYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...TCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCCTTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: QLYWTVVNVAFVNTASLPYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...AGGAAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CAA 90 bp ACGTGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: TCFTWQCLRGTVTKLIATYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...AGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCACGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp AGGAGGGTCTGGCTGAACTATGTAAGTCACGTCCACATAAAGTTCATCCGAGAAAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: RRVWLNYVSHVHIKFIRERETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...TTCTCGGATGAACTTTATGTGGACGTGACTTACATAGTTCAGCCAGACCCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATGACCCCGGACACCTaGGCATACTCCTTATTGTTC +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHMTPDT*AYSLLF
Trigger: GAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGATGGTGGGGCCTCTTaGGCTGATTCTTCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: FKASHVFSMWIWHQHQDVDGGAS*ADSSKQ
Trigger: TTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATC...AACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGTTGGCTGCCTTCTCTaGCTGCAGGAAATGTATCAG +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHVGCLL*LQEMYQ
Trigger: CTGATACATTTCCTGCAGCAAGAGAAGGCAGCCAAC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACGTTGGCTGCCTTCTCTaGCTGCAGGAAATGTATCAG +
Preference number: 5 (lower is better)
Translates to: LADSSKQATFLACGSGTNVGCLL*LQEMYQ
Trigger: CTGATACATTTCCTGCAGCAAGAGAAGGCAGCCAAC...GTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp TCTCAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAGTGGTAAGGGCCATGTaGAACATTTGGATCCACCAG +
Preference number: 5 (lower is better)
Translates to: SQLDSVQVMVGPLWLILQVVRAM*NIWIHQ
Trigger: CTGGTGGATCCAAATGTTCAACATGGCCCTTACCAC...TTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS CCA 90 bp GGTAAATCCTCCTCTGCATTTCCTACACTGACAAGGAGAATGCTGTaGCTCTACGCAGTCATCCTTTTACAACTTTTGCCAGGGAGCAAA +
Preference number: 5 (lower is better)
Translates to: GKSSSAFPTLTRRML*LYAVILLQLLPGSK
Trigger: TTTGCTCCCTGGCAAAAGTTGTAAAAGGATGACTGCGTAGAGCCACAGCATTCTCCTTGTCAGTGTAGGAAATGCAGAGGAGGATTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000515839.1
CDS-3UTR CAA 90 bp CCTTTTTGTGTGGGTTTCCAGCTCCCAGTCAATTCTGCTTTGGGGGCAGTAGGGGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: PFCVGFQLPVNSALGAVGVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...CCCTACTGCCCCCAAAGCAGAATTGACTGGGAGCTGGAAACCCACACAAAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CAA 90 bp GTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCAATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: VAKSTSLLGFPLLQNGGPIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...TGGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp AGCGTGAACCAACCAGTTTTTAAGTCAATCAGGGTAGGTGGAGACCATTTAATCTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: SVNQPVFKSIRVGGDHLIYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...GATTAAATGGTCTCCACCTACCCTGATTGACTTAAAAACTGGTTGGTTCACGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397391.7
ENST00000618625.4
CDS-3UTR CAA 90 bp ACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: TDLATSFTNTCITTFYSKYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...TTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTCAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: GASLADSSKQATFLACGSQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...AGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp CTTCAGCTCTACTGGACTGTGGTCAATGTTGCCTTTGTGAACACCGCAAGTCTTCAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: LQLYWTVVNVAFVNTASLQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...AAGACTTGCGGTGTTCACAAAGGCAACATTGACCACAGTCCAGTAGAGCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509140.5
ENST00000513753.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GACTGGGGATGGGTAGATATCATTAATCTTGGGTCACCCTGTAAGGGAGACAACCAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: DWGWVDIINLGSPCKGDNQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...GTTGTCTCCCTTACAGGGTGACCCAAGATTAATGATATCTACCCATCCCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000231423.7
ENST00000509140.5
ENST00000513753.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGACCGACTTGGGTGTTCTTTaGAATGGACTGACATTAGAT +
Preference number: 5 (lower is better)
Translates to: GCEEYISSRFPTASEWGTDLGVL*NGLTLD
Trigger: ATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTC...GGTCCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CAA 90 bp TCATTAATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: SLILGHPVRETTDLATSFYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...GAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGATTAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: ETTDLATSFTNTCITTFYRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGATGTTGCAGTGAAGTaGGCCAGGGCTTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCDVAVK*ARAFSA
Trigger: AGCTGAGAAAGCCCTGGCCAACTTCACTGCAACATC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACCGGGCTTCTTGGGCTaGCCGCTGTTCTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEPGFLG*PLFSLC
Trigger: ACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCCGGGCTTCTTGGGCTaGCCGCTGTTCTCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDPGFLG*PLFSLC
Trigger: ACAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCGCAAGTCAAACAGACTaGATCTGTCCTTTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLASQTD*ICPFQK
Trigger: CTTTTGGAAAGGACAGATCAAGTCTGTTTGACTTGC...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAGAGATTTGGGGCTGTaGGATTCAGCAAGGAATGAG +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHRDLGL*DSARNE
Trigger: CTCATTCCTTGCTGAATCCAACAGCCCCAAATCTCT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTACAGGCAGTAAAGGATaGACCCCTTCAGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLTGSKG*TPSDQA
Trigger: GGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTGT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCTTTGTTTGGCAGGCATaGGTTTTGGCATGCAGTAAA +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLFVWQA*VLACSK
Trigger: TTTACTGCATGCCAAAACCAATGCCTGCCAAACAAA...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CCAGGTTGCGAAGAGTACATCTCTTCTAGGTTTCCCACTGCTTCAGAATGGGGGGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: PGCEEYISSRFPTASEWGVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...CCCCCATTCTGAAGCAGTGGGAAACCTAGAAGAGATGTACTCTTCGCAACCTGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CAA 90 bp AGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCAATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: SDGGASLADSSKQATFLAIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...TGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp ATCTTGGGTCACCCTGTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: ILGHPVRETTDLATSFTNNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTACAGGGTGACCCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTGACTTGGGTGTTCTTTaGAATGGACTGACATTAGAT +
Preference number: 5 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRDLGVL*NGLTLD
Trigger: ATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTC...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp TGCTTTACATGGCAGTGCCTAAGGGGGACAGTGACAAAGCTGATTGCAACTAGGGACTTGGGTGTTCTTTaGAATGGACTGACATTAGAT +
Preference number: 5 (lower is better)
Translates to: CFTWQCLRGTVTKLIATRDLGVL*NGLTLD
Trigger: ATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTC...CCTAGTTGCAATCAGCTTTGTCACTGTCCCCCTTAGGCACTGCCATGTAAAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000231423.7
ENST00000542609.5
CDS-3UTR CAA 90 bp AAAGGAGTGTGTAAAACATGCGGGATCCAGGTAATCCAAACCACCCAGCTGGAGGACTTGGGTGTTCTTTaGAATGGACTGACATTAGAT +
Preference number: 5 (lower is better)
Translates to: KGVCKTCGIQVIQTTQLEDLGVL*NGLTLD
Trigger: ATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTC...CTCCAGCTGGGTGGTTTGGATTACCTGGATCCCGCATGTTTTACACACTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp CTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCTATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LGHILHKHLHNNLLLQMPYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...GGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCAGTTCTCTCTCTTGACTaGGGTGTTCTTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: DSVQVMVGPLWLILQSKPVLSLD*GVLLNG
Trigger: TCCATTCAAAAGAACACCCAAGTCAAGAGAGAGAAC...TGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCGTTCTCTCTCTTGACTaGGGTGTTCTTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSVLSLD*GVLLNG
Trigger: TCCATTCAAAAGAACACCCAAGTCAAGAGAGAGAAC...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAACCAACACCAGGATGTaGTTATCCATGACCCCGGAC +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLETNTRM*LSMTPD
Trigger: GTCCGGGGTCATGGATAACAACATCCTGGTGTTGGT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGATGGTGGGGCCTCTTaGGCTGATTCTTCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCDGGAS*ADSSKQ
Trigger: TTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGGACATGAAGCTCCATaGTGTGGAAAGCTGTTTCGC +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLGHEAP*CGKLFR
Trigger: GCGAAACAGCTTTCCACACAATGGAGCTTCATGTCC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR CAA 90 bp TCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTGTTTCATACCTTGACTaGGGTGTTCTTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: SVQVMVGPLWLILQSKPRVSYLD*GVLLNG
Trigger: TCCATTCAAAAGAACACCCAAGTCAAGGTATGAAAC...ACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAGGAAACATAATGATTaGTTCTGGAATCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLRKHND*FWNQLL
Trigger: CAGCAGCTGATTCCAGAACAAATCATTATGTTTCCT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCGCCTCTGCCAAGATTTaGCAATTGAATTTACTTCAG +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLASAKI*QLNLLQ
Trigger: CTGAAGTAAATTCAATTGCAAAATCTTGGCAGAGGC...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAAGCCTGGCACTGGAATaGACCGGGAGATTCTCATTA +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISSLALE*TGRFSL
Trigger: TAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGCT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCGCCATTCTCAAAACATaGGCAATGTGTTCACTTTCA +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLAILKT*AMCSLS
Trigger: TGAAAGTGAACACATTGCCAATGTTTTGAGAATGGC...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAACAGGCAGTAAAGGATaGACCCCTTCAGACCAAGCC +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLETGSKG*TPSDQA
Trigger: GGCTTGGTCTGAAGGGGTCAATCCTTTACTGCCTGT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAGGCAGTGGTGGACACTaGAGGAAAGAGAAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEGSGGH*RKEKAR
Trigger: TCTGGCTTTCTCTTTCCTCAAGTGTCCACCACTGCC...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: DSSKQATFLACGSGTNTRNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: VRETTDLATSFTNTCITTNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...GGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GCTGAACTATGTAAGTCACGTCCACATAAAGTTCATCCGAGAAACTGCTTCCCACAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: AELCKSRPHKVHPRNCFPQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...TGGGAAGCAGTTTCTCGGATGAACTTTATGTGGACGTGACTTACATAGTTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000618625.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAGTGGGAGGAAAGTCTaGGCATCCCAAGGCACTCAG +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDESGRKV*ASQGTQ
Trigger: CTGAGTGCCTTGGGATGCCAAGACTTTCCTCCCACT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGGACTTGGGTGTTCTTTaGAATGGACTGACATTAGAT +
Preference number: 5 (lower is better)
Translates to: DSSKQATFLACGSGTNTRDLGVL*NGLTLD
Trigger: ATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTC...CCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310101.9
ENST00000508107.5
ENST00000619676.4
CDS-3UTR CAA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATATATAATTGTCCCTTTTaGTGTGGGTTTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIYNCPF*CGFPAP
Trigger: GGGAGCTGGAAACCCACACAAAAAGGGACAATTATA...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GCAAGCCACGTTTTTAGCATGTGGATCTGGCACCAACACCAGGATGTTGTTATCAGGAAACATAATGATTaGTTCTGGAATCAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ASHVFSMWIWHQHQDVVIRKHND*FWNQLL
Trigger: CAGCAGCTGATTCCAGAACAAATCATTATGTTTCCT...GATAACAACATCCTGGTGTTGGTGCCAGATCCACATGCTAAAAACGTGGCTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTTGGAGCTATTCCCATaGCTCTGGGAAGCAAATACC +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLLELFP*LWEANT
Trigger: GGTATTTGCTTCCCAGAGCAATGGGAATAGCTCCAA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTGGCCTTTCAGAAGTaGTGCGTAGTTTTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISLAFQK*CVVLQV
Trigger: GACCTGCAAAACTACGCACAACTTCTGAAAGGCCAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCATGTATCCTTCCATTaGAACAGCTGTCTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHHVSFH*NSCLLD
Trigger: ATCAAGGAGACAGCTGTTCAAATGGAAGGATACATG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCCACAACAGCTCTGTGTaGATTCAATTAAACAATACG +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLHNSSV*IQLNNT
Trigger: CGTATTGTTTAATTGAATCAACACAGAGCTGTTGTG...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GGATTTAGGGGACTGAATGAGCTTGGACAACTTTCCCACACGCTTCCCTTACTCAACTCAGACTACATTTaGAGGTTTATCCAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: GFRGLNELGQLSHTLPLLNSDYI*RFIQVK
Trigger: CTTCACTTGGATAAACCTCAAAATGTAGTCTGAGTT...GAGTAAGGGAAGCGTGTGGGAAAGTTGTCCAAGCTCATTCAGTCCCCTAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGAGGTAGTGGTAGCTTaGAAAATGTGGAACCTTATG +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHEVVVA*KMWNLM
Trigger: CATAAGGTTCCACATTTTCAAAGCTACCACTACCTC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS TCA 90 bp TTTCATGTCATTTATTTCTCACTCACAGCAACAATCCAGGCAAAATaGAGGGAAGTGGATAAAGGCCTCTGCACTGGGGTGATGTGTACA +
Preference number: 5 (lower is better)
Translates to: FHVIYFSLTATIQAK*REVDKGLCTGVMCT
Trigger: TGTACACATCACCCCAGTGCAGAGGCCTTTATCCACTTCCCTTCATTTTGCCTGGATTGTTGCTGTGAGTGAGAAATAAATGACATGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504500.5
CDS-3UTR CAA 90 bp CAGCTTGATTCTGTTCAAGTGATGGTGGGGCCTCTTTGGCTGATTCTTCAAAGCGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: QLDSVQVMVGPLWLILQSVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...GCTTTGAAGAATCAGCCAAAGAGGCCCCACCATCACTTGAACAGAATCAAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp GTAAGGGAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: VRETTDLATSFTNTCITTVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...GGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCTTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CAA 90 bp GGGGCCTCTTTGGCTGATTCTTCAAAGCAAGCCACGTTTTTAGCATGTGGATCTGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: GASLADSSKQATFLACGSVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...AGATCCACATGCTAAAAACGTGGCTTGCTTTGAAGAATCAGCCAAAGAGGCCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACATGGAGGTGTACTGCTaGCCAAAGTGGCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDMEVYC*PKWQEL
Trigger: CAACTCCTGCCACTTTGGCAAGCAGTACACCTCCAT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR CAA 90 bp GGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCATAATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: GHILHKHLHNNLLLQMPIIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...TATGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCAATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: LATSFTNTCITTFYSKCPIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...TGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTATCCATGGTCTGGTTaGCAGCGAACCTGGACAAGG +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDYPWSG*QRTWTR
Trigger: CCTTGTCCAGGTTCGCTGCAAACCAGACCATGGATA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATGACTTGGGTGTTCTTTaGAATGGACTGACATTAGAT +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHDLGVL*NGLTLD
Trigger: ATCTAATGTCAGTCCATTCAAAAGAACACCCAAGTC...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: LGKQREYVTFNIIVPFCVPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...CACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp AAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTCCAGTCAATTCTGCTTaGGGGGCAGTAGGGAGTGAT +
Preference number: 5 (lower is better)
Translates to: KALGKQREYVTFNIIVPFPVNSA*GAVGSD
Trigger: ATCACTCCCTACTGCCCCCAAAGCAGAATTGACTGG...AAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp GGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTTGTGTGGGTAGGGAGACAACTGACTaGGCCACATCCTTCACAAAC +
Preference number: 5 (lower is better)
Translates to: GKQREYVTFNIIVPFCVGRETTD*ATSFTN
Trigger: GTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTCCCT...ACCCACACAAAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACACCAACACCAGGATGTaGTTATCCATGACCCCGGAC +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDTNTRM*LSMTPD
Trigger: GTCCGGGGTCATGGATAACAACATCCTGGTGTTGGT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAGCTGGAGCCTGCACTaGCTTGATGTTGCAGTGAAG +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDESWSLH*LDVAVK
Trigger: CTTCACTGCAACATCAAGCAAGTGCAGGCTCCAGCT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTGGCCTTTCAGAAGTaGTGCGTAGTTTTGCAGGTC +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLELAFQK*CVVLQV
Trigger: GACCTGCAAAACTACGCACAACTTCTGAAAGGCCAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTACTGAACATTGCTGGTaGGCCCTTAGACCATTTTGT +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCTEHCW*ALRPFC
Trigger: ACAAAATGGTCTAAGGGCCAACCAGCAATGTTCAGT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACTTGTGATCTTCAACTaGGCCTTGGATATCTGTGTG +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISLVIFN*ALDICV
Trigger: CACACAGATATCCAAGGCCAAGTTGAAGATCACAAG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTCTTGTGATCTTCAACTaGGCCTTGGATATCTGTGTG +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLLVIFN*ALDICV
Trigger: CACACAGATATCCAAGGCCAAGTTGAAGATCACAAG...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATATCATTATCATGGCTTaGGACAACTATGAGGTGACT +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHIIIMA*DNYEVT
Trigger: AGTCACCTCATAGTTGTCCAAAGCCATGATAATGAT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACATGCGGTGTTTTATTaGACCCACATCCTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISHAVFY*THILFP
Trigger: AGGAAAGAGGATGTGGGTCAAATAAAACACCGCATG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACTCCAAATGCCCAAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: LATSFTNTCITTFYSKCPNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...TGGGCATTTGGAGTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAACAAATCCTTTTATTTTaGGCCCAGGAACTGGCGGAA +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEQILLF*AQELAE
Trigger: TTCCGCCAGTTCCTGGGCCAAAAATAAAAGGATTTG...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATGACCCCGGACACCTaGGCATACTCCTTATTGTTC +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEMTPDT*AYSLLF
Trigger: GAACAATAAGGAGTATGCCAAGGTGTCCGGGGTCAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGATGGTGGGGCCTCTTaGGCTGATTCTTCAAAGCAA +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYADGGAS*ADSSKQ
Trigger: TTGCTTTGAAGAATCAGCCAAAGAGGCCCCACCATC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGTTGGCTGCCTTCTCTaGCTGCAGGAAATGTATCAG +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAVGCLL*LQEMYQ
Trigger: CTGATACATTTCCTGCAGCAAGAGAAGGCAGCCAAC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGTGGTAAGGGCCATGTaGAACATTTGGATCCACCAG +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEVVRAM*NIWIHQ
Trigger: CTGGTGGATCCAAATGTTCAACATGGCCCTTACCAC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTCAGAGGATATACCTATaGGCATTGTCCCTCAAGAAT +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCQRIYL*ALSLKN
Trigger: ATTCTTGAGGGACAATGCCAATAGGTATATCCTCTG...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAGCCTGGCACTGGAATaGACCGGGAGATTCTCATTA +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASLALE*TGRFSL
Trigger: TAATGAGAATCTCCCGGTCAATTCCAGTGCCAGGCT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACATGTATCCTTCCATTaGAACAGCTGTCTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISHVSFH*NSCLLD
Trigger: ATCAAGGAGACAGCTGTTCAAATGGAAGGATACATG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATACACAAATCACCCGTaGCCTAGATTCAGTTTCCAT +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISYTNHP*PRFSFH
Trigger: ATGGAAACTGAATCTAGGCAACGGGTGATTTGTGTA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAACTGAACATTGCTGGTaGGCCCTTAGACCATTTTGT +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLETEHCW*ALRPFC
Trigger: ACAAAATGGTCTAAGGGCCAACCAGCAATGTTCAGT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCCAATGTGCATGCATaGTTCTCTTCAGGTTTAGGC +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESNVHA*FSSGLG
Trigger: GCCTAAACCTGAAGAGAACAATGCATGCACATTGGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTCAGTGACAGCATTATaGTGCTTGAGCCAAAAAGGA +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCSVTAL*CLSQKG
Trigger: TCCTTTTTGGCTCAAGCACAATAATGCTGTCACTGA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTATCTTCAACTTGGCCTaGGATATCTGTGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLIFNLA*DICVTD
Trigger: ATCAGTCACACAGATATCCAAGGCCAAGTTGAAGAT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTTTATGCAAAGAACACTaGAGAAGTGTCAGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLLCKEH*RSVSSH
Trigger: GTGACTGCTGACACTTCTCAAGTGTTCTTTGCATAA...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGAGGTAGTGGTAGCTTaGAAAATGTGGAACCTTATG +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISEVVVA*KMWNLM
Trigger: CATAAGGTTCCACATTTTCAAAGCTACCACTACCTC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATCTGCACTCTATGGTTTaGTTGGTTTTTCATATGATG +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHLHSMV*LVFHMM
Trigger: CATCATATGAAAAACCAACAAAACCATAGAGTGCAG...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTTGGCAGGCATTGGTTTaGGCATGCAGTAAAAATGAA +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCWQALV*ACSKNE
Trigger: TTCATTTTTACTGCATGCCAAAACCAATGCCTGCCA...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ATTGGATCTCCTTGTATCTGGTTCCATCTCCCCTCATTTTTCTCAGCCTCCCATAATAAGCTTCTCTTATaGGATCTCCTTGTATCTGGT +
Preference number: 5 (lower is better)
Translates to: IGSPCIWFHLPSFFSASHNKLLL*DLLVSG
Trigger: ACCAGATACAAGGAGATCCAATAAGAGAAGCTTATT...ATGGGAGGCTGAGAAAAATGAGGGGAGATGGAACCAGATACAAGGAGATCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GAGACAACTGACTTGGCCACATCCTTCACAAACACCTGCATAACAACCTTTTACGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: ETTDLATSFTNTCITTFYVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...GTAAAAGGTTGTTATGCAGGTGTTTGTGAAGGATGTGGCCAAGTCAGTTGTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLNLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGAGAGTTCTTTAGTTTaGCCAGGGAGCAAAGTCTGC +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDESSLV*PGSKVC
Trigger: GCAGACTTTGCTCCCTGGCAAAACTAAAGAACTCTC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGTTTCATACCTTGACTaGGGTGTTCTTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISVSYLD*GVLLNG
Trigger: TCCATTCAAAAGAACACCCAAGTCAAGGTATGAAAC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATGTTCTCTCTCTGTTTaGGTAGCAATGATAATGCAC +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISCSLSV*VAMIMH
Trigger: GTGCATTATCATTGCTACCAAAACAGAGAGAGAACA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508107.5
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTTGGAGCTATTCCCATaGCTCTGGGAAGCAAATACC +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYALELFP*LWEANT
Trigger: GGTATTTGCTTCCCAGAGCAATGGGAATAGCTCCAA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AGATCTCTGTTTTTCTCTGAAGCGTTGTCACACAATCTCATGTGCTCACTGCTTGGAGCTTCGTATCTATaGCTTTTGCCATTCTCAAAA +
Preference number: 5 (lower is better)
Translates to: RSLFFSEALSHNLMCSLLGASYL*LLPFSK
Trigger: TTTTGAGAATGGCAAAAGCAATAGATACGAAGCTCC...AAGCAGTGAGCACATGAGATTGTGTGACAACGCTTCAGAGAAAAACAGAGATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCATTGTGGATCCTATGGTaGCTACTAACTCTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISLWILW*LLTLRK
Trigger: TTTCCTAAGAGTTAGTAGCAACCATAGGATCCACAA...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTATGCAAAGAACACTaGAGAAGTGTCAGCAGTCAC +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLELCKEH*RSVSSH
Trigger: GTGACTGCTGACACTTCTCAAGTGTTCTTTGCATAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTATCATTATCATGGCTTaGGACAACTATGAGGTGACT +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCIIIMA*DNYEVT
Trigger: AGTCACCTCATAGTTGTCCAAAGCCATGATAATGAT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATTTGTTTGGCAGGCATaGGTTTTGGCATGCAGTAAA +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEFVWQA*VLACSK
Trigger: TTTACTGCATGCCAAAACCAATGCCTGCCAAACAAA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATCTATTAAATGGAAGTaGCATCTTCCAGCCCCAAAG +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLESIKWK*HLPAPK
Trigger: CTTTGGGGCTGGAAGATGCAACTTCCATTTAATAGA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAG +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCVNVSL*GERHLK
Trigger: CTTTAAATGTCGTTCTCCCAATAAGGAAACATTCAC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAATCTTAAACTCTGTTaGCTGCCCAGCAAAATGGAT +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLENLKLC*LPSKMD
Trigger: ATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTATATACCTATTGGCATaGTCCCTCAAGAATACTAAG +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCIYLLA*SLKNTK
Trigger: CTTAGTATTCTTGAGGGACAATGCCAATAGGTATAT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTGGCATTATTTCTTACTaGCATATCAGCAATGTGTCA +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCGIISY*HISNVS
Trigger: TGACACATTGCTGATATGCAAGTAAGAAATAATGCC...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAAACTTCAGTGTGCAATaGAATCATTTGGGGATCTTA +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISNFSVQ*NHLGIL
Trigger: TAAGATCCCCAAATGATTCAATTGCACACTGAAGTT...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAATATAAGAAAAGAGATTaGGGGCTGTTGGATTCAGCA +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEYKKRD*GLLDSA
Trigger: TGCTGAATCCAACAGCCCCAAATCTCTTTTCTTATA...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCAGTTAAAGTGAGTCTTTaGTACTTAAGTGACTACCAG +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISVKVSL*YLSDYQ
Trigger: CTGGTAGTCACTTAAGTACAAAAGACTCACTTTAAC...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAAGGAGCTGGGAGCTTTAGTAGTGTCAGTCTGACTACATTCTTGAGCATTTCACACAACAGCTCTGTGTaGATTCAATTAAACAATACG +
Preference number: 5 (lower is better)
Translates to: KGAGSFSSVSLTTFLSISHNSSV*IQLNNT
Trigger: CGTATTGTTTAATTGAATCAACACAGAGCTGTTGTG...TGAAATGCTCAAGAATGTAGTCAGACTGACACTACTAAAGCTCCCAGCTCCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTCCAATGTGCATGCATaGTTCTCTTCAGGTTTAGGC +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDSNVHA*FSSGLG
Trigger: GCCTAAACCTGAAGAGAACAATGCATGCACATTGGA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GCATTTCATGGAATCCTGAGATGCCCAAATCTCTGGAAACTTCCTATTTCCTGTAACTCAGACTACATTTaGAGGTTTATCCAAGTGAAG +
Preference number: 5 (lower is better)
Translates to: AFHGILRCPNLWKLPISCNSDYI*RFIQVK
Trigger: CTTCACTTGGATAAACCTCAAAATGTAGTCTGAGTT...ACAGGAAATAGGAAGTTTCCAGAGATTTGGGCATCTCAGGATTCCATGAAATGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAATTTCTCACTTAGTGTaGGGGAATTTTGCTTGGCAT +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEISHLV*GNFAWH
Trigger: ATGCCAAGCAAAATTCCCCAACACTAAGTGAGAAAT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTCTTATTGGATCTCCTaGTATCTGGTTCCATCTCCC +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYASYWIS*YLVPSP
Trigger: GGGAGATGGAACCAGATACAAGGAGATCCAATAAGA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAACATGCGGTGTTTTATTaGACCCACATCCTCTTTCCT +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEHAVFY*THILFP
Trigger: AGGAAAGAGGATGTGGGTCAAATAAAACACCGCATG...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp AAGGCACTAGGTAAGCAGAGGGAGTATGTTACATTCAATATAATTGTCCCTTTTATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: KALGKQREYVTFNIIVPFIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...AAAAGGGACAATTATATTGAATGTAACATACTCCCTCTGCTTACCTAGTGCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000231423.7
ENST00000348262.7
ENST00000397391.7
ENST00000509140.5
ENST00000513753.5
ENST00000514088.5
ENST00000542609.5
ENST00000618625.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACATCTGGTTAGTGGCATaGACCATCATGATGTATGTC +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDIWLVA*TIMMYV
Trigger: GACATACATCATGATGGTCAATGCCACTAACCAGAT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000618457.5
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACATTTCACAGTGGGCTTaGGGTTGGTATGGCATTTTA +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDISQWA*GWYGIL
Trigger: TAAAATGCCATACCAACCCAAAGCCCACTGTGAAAT...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAACTTCAGTGTGCAATaGAATCATTTGGGGATCTTA +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLENFSVQ*NHLGIL
Trigger: TAAGATCCCCAAATGATTCAATTGCACACTGAAGTT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGCAAGTCAAACAGACTaGATCTGTCCTTTCCAAAAG +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEASQTD*ICPFQK
Trigger: CTTTTGGAAAGGACAGATCAAGTCTGTTTGACTTGC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp CTATTAAATGGAAGTTGCATCTTCCAGCCCCAAAGAAACTGGGGAGATTTAGAAAAGTTGTGCGTAGTTTaGCAGGTCATTCTTTTATGT +
Preference number: 5 (lower is better)
Translates to: LLNGSCIFQPQRNWGDLEKLCVV*QVILLC
Trigger: ACATAAAAGAATGACCTGCAAAACTACGCACAACTT...TTCTAAATCTCCCCAGTTTCTTTGGGGCTGGAAGATGCAACTTCCATTTAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTTTTTCTCTGAAGCGTaGTCACACAATCTCATGTGC +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAFFSEA*SHNLMC
Trigger: GCACATGAGATTGTGTGACAACGCTTCAGAGAAAAA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAATCTTCAACTTGGCCTaGGATATCTGTGTGACTGAT +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEIFNLA*DICVTD
Trigger: ATCAGTCACACAGATATCCAAGGCCAAGTTGAAGAT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAATGGCAGGCATTGGTTTaGGCATGCAGTAAAAATGAA +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEWQALV*ACSKNE
Trigger: TTCATTTTTACTGCATGCCAAAACCAATGCCTGCCA...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAGTTTCATACCTTGACTaGGGTGTTCTTTTGAATGGA +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEVSYLD*GVLLNG
Trigger: TCCATTCAAAAGAACACCCAAGTCAAGGTATGAAAC...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACTGTTCTCTCTCTGTTTaGGTAGCAATGATAATGCAC +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDCSLSV*VAMIMH
Trigger: GTGCATTATCATTGCTACCAAAACAGAGAGAGAACA...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCGCCTCTGCCAAGATTTaGCAATTGAATTTACTTCAG +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYAASAKI*QLNLLQ
Trigger: CTGAAGTAAATTCAATTGCAAAATCTTGGCAGAGGC...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTGCTTACATGCAGTGTaGTTCATTGCAAGTCAAACA +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYACLHAV*FIASQT
Trigger: TGTTTGACTTGCAATGAACAACACTGCATGTAAGCA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCTTGTGGATCCTATGGTaGCTACTAACTCTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYALWILW*LLTLRK
Trigger: TTTCCTAAGAGTTAGTAGCAACCATAGGATCCACAA...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACGTGCAATTGAATCATTaGGGGATCTTAGTAAAATGC +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDVQLNH*GILVKC
Trigger: GCATTTTACTAAGATCCCCAAATGATTCAATTGCAC...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp ACTGATTTAACCTTTGACTCAGTCTTTTGCAGTGCCAAAGTCATTGTTGATGAAAAGTTGTGCGTAGTTTaGCAGGTCATTCTTTTATGT +
Preference number: 5 (lower is better)
Translates to: TDLTFDSVFCSAKVIVDEKLCVV*QVILLC
Trigger: ACATAAAAGAATGACCTGCAAAACTACGCACAACTT...TTCATCAACAATGACTTTGGCACTGCAAAAGACTGAGTCAAAGGTTAAATCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp TTTAGGTGTTGGGACTTCCAAGGTAGAATACATCTGACAATATCAAAAACAGACCTGCACTCTATGGTTTaGTTGGTTTTTCATATGATG +
Preference number: 5 (lower is better)
Translates to: FRCWDFQGRIHLTISKTDLHSMV*LVFHMM
Trigger: CATCATATGAAAAACCAACAAAACCATAGAGTGCAG...GTCTGTTTTTGATATTGTCAGATGTATTCTACCTTGGAAGTCCCAACACCTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS-3UTR CAA 90 bp GTAACAGTTACTGTAAAGTCAGTAATGCCACTTGGCAAATACATCAAATATGCCAATAAGCTTCTCTTATaGGATCTCCTTGTATCTGGT +
Preference number: 5 (lower is better)
Translates to: VTVTVKSVMPLGKYIKYANKLLL*DLLVSG
Trigger: ACCAGATACAAGGAGATCCAATAAGAGAAGCTTATT...GGCATATTTGATGTATTTGCCAAGTGGCATTACTGACTTTACAGTAACTGTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000618457.5
ENST00000620785.4
CDS CCA 72 bp GAGTTCTTTAGCCTGATGTCACCCTGGCACAGGCTGTaGCAGCTCTTCAGAGTTCCCTGTCTGGCCTCTCTC +
Preference number: 6 (lower is better)
Translates to: EFFSLMSPWHRL*QLFRVPCLASL
Trigger: GAGAGAGGCCAGACAGGGAACTCTGAAGAGCTGCCACAGCCTGTGCCAGGGTGACATCAGGCTAAAGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509839.5
CDS CCA 72 bp ACATGGAGGTGTACTGCTTGCCAAAGTGGCAGGAGTTaGGGCCACCGGTTATGTAGTCTGGACATTCATGCA +
Preference number: 6 (lower is better)
Translates to: TWRCTACQSGRS*GHRLCSLDIHA
Trigger: TGCATGAATGTCCAGACTACATAACCGGTGGCCCCAACTCCTGCCACTTTGGCAAGCAGTACACCTCCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000231423.7
ENST00000310101.9
ENST00000348262.7
ENST00000397391.7
ENST00000503330.5
ENST00000509140.5
ENST00000509839.5
ENST00000509934.1
ENST00000513753.5
ENST00000514088.5
ENST00000514206.5
ENST00000542609.5
ENST00000618457.5
ENST00000618625.4
ENST00000619676.4
CDS TCA 72 bp CCACATCAGTCGATGAGTACTTCCTGCACGAGGACATaGAGCTCCATTGTGTGGAAAGCTGTTTCGCGAACG +
Preference number: 6 (lower is better)
Translates to: PHQSMSTSCTRT*SSIVWKAVSRT
Trigger: CGTTCGCGAAACAGCTTTCCACACAATGGAGCTTCATGTCCTCGTGCAGGAAGTACTCATCGACTGATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000504500.5
ENST00000508107.5
ENST00000515839.1
ENST00000618457.5
CDS TCA 72 bp GTTTTGCCAGGGAGCAAAGTCTGCCACATCAGTCGATaGGTACTTCCTGCACGAGGACATGAAGCTCCATTG +
Preference number: 6 (lower is better)
Translates to: VLPGSKVCHISR*VLPARGHEAPL
Trigger: CAATGGAGCTTCATGTCCTCGTGCAGGAAGTACTCATCGACTGATGTGGCAGACTTTGCTCCCTGGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618457.5
CDS TCA 72 bp CTTTTGCCAGGGAGCAAAGTCTGCCACATCAGTCGATaGGTACTTCCTGCACGAGGACATGAAGCTCCATTG +
Preference number: 6 (lower is better)
Translates to: LLPGSKVCHISR*VLPARGHEAPL
Trigger: CAATGGAGCTTCATGTCCTCGTGCAGGAAGTACTCATCGACTGATGTGGCAGACTTTGCTCCCTGGCAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000504500.5
ENST00000515839.1
CDS TCA 72 bp GGTTCATGTGGAAAGCATCCTCAGTGTTCGCCTCCATaGATAGGAGAGTTCTTTAGCTGCCTCCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: GSCGKHPQCSPP*IGEFFSCLLSC
Trigger: GCAGGACAGGAGGCAGCTAAAGAACTCTCCTATTCATGGAGGCGAACACTGAGGATGCTTTCCACATGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503330.5
CDS CCA 72 bp GTATCACATGACTTAACAGGTGCAAGCTGGCAGGCATaGGACTTGGTATCCGTAAGACTTTTGCCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: VSHDLTGASWQA*DLVSVRLLPGS
Trigger: GCTCCCTGGCAAAAGTCTTACGGATACCAAGTCCCATGCCTGCCAGCTTGCACCTGTTAAGTCATGTGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504500.5
CDS CAA 72 bp TCCTTATTGTTCTCAGGAGTCCCGGGCTTCTTGGGCTaGCCGCTGTTCTCTCTCTTGACTTGGGTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: SLLFSGVPGFLG*PLFSLLTWVFF
Trigger: AAAGAACACCCAAGTCAAGAGAGAGAACAGCGGCAAGCCCAAGAAGCCCGGGACTCCTGAGAACAATAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310101.9
ENST00000619676.4
CDS TCA 72 bp GGTTCATGTGGAAAGCATCCTCAGTGTTCGCCTCCATaGATAGGAGAGTTCTTTAGCCTGATGTCACCCTGG +
Preference number: 6 (lower is better)
Translates to: GSCGKHPQCSPP*IGEFFSLMSPW
Trigger: CCAGGGTGACATCAGGCTAAAGAACTCTCCTATTCATGGAGGCGAACACTGAGGATGCTTTCCACATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509839.5
CDS TCA 72 bp GGTTCATGTGGAAAGCATCCTCAGTGTTCGCCTCCATaGATAGGAGAGTTCTTTAGCTGTCGCCTTTGGGCA +
Preference number: 6 (lower is better)
Translates to: GSCGKHPQCSPP*IGEFFSCRLWA
Trigger: TGCCCAAAGGCGACAGCTAAAGAACTCTCCTATTCATGGAGGCGAACACTGAGGATGCTTTCCACATGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515839.1
CDS CCA 72 bp AGGTCACCATGCACTAGGTATCTGAATGAAGGTCGCTaGACTCCATGCACTCCAGTATCCATGGTCTGGTTT +
Preference number: 6 (lower is better)
Translates to: RSPCTRYLNEGR*TPCTPVSMVWF
Trigger: AAACCAGACCATGGATACTGGAGTGCATGGAGTCCAGCGACCTTCATTCAGATACCTAGTGCATGGTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509934.1
CDS CAA 90 bp CCTCCATCTGTCCCAGGCCTCCACCAGCAGGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAGATCTCAGGTTTTCCAGGAGGTAAC +
Preference number: 6 (lower is better)
Translates to: PPSVPGLHQQVNVSL*GERHLKISGFPGGN
Trigger: GTTACCTCCTGGAAAACCTGAGATCTTTAAATGTCGTTCTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGCCTGGGACAGATGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000231423.7
ENST00000310101.9
ENST00000348262.7
ENST00000503330.5
ENST00000504500.5
ENST00000509140.5
ENST00000509839.5
ENST00000509934.1
ENST00000513753.5
ENST00000514088.5
ENST00000514206.5
ENST00000542609.5
ENST00000618457.5
ENST00000619676.4
CDS TCA 72 bp ATGCATGAGTGTCTCTCCTTCCCTGTGGTAAGTCAGTaGATAATTGGTAGGAAGTCCTCCATCTGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: MHECLSFPVVSQ*IIGRKSSICPR
Trigger: CCTGGGACAGATGGAGGACTTCCTACCAATTATTCACTGACTTACCACAGGGAAGGAGAGACACTCATGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000231423.7
ENST00000310101.9
ENST00000348262.7
ENST00000503330.5
ENST00000509140.5
ENST00000509839.5
ENST00000509934.1
ENST00000513753.5
ENST00000514088.5
ENST00000514206.5
ENST00000542609.5
ENST00000618457.5
ENST00000619676.4
CDS TCA 72 bp GGTTCATGTGGAAAGCATCCTCAGTGTTCGCCTCCATaGATAGGAGAGTTCTTTAGTTTTGCCAGGGAGCAA +
Preference number: 6 (lower is better)
Translates to: GSCGKHPQCSPP*IGEFFSFAREQ
Trigger: TTGCTCCCTGGCAAAACTAAAGAACTCTCCTATTCATGGAGGCGAACACTGAGGATGCTTTCCACATGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508107.5
ENST00000618457.5
CDS CAA 72 bp GTCCCAGGCCTCCACCAGCAGGTGAATGTTTCCTTATaGGGAGAACGACATTTAAAGATCTCAGGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: VPGLHQQVNVSL*GERHLKISGFP
Trigger: TGGAAAACCTGAGATCTTTAAATGTCGTTCTCCCAATAAGGAAACATTCACCTGCTGGTGGAGGCCTGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000231423.7
ENST00000310101.9
ENST00000348262.7
ENST00000503330.5
ENST00000504500.5
ENST00000509140.5
ENST00000509839.5
ENST00000509934.1
ENST00000513753.5
ENST00000514088.5
ENST00000514206.5
ENST00000542609.5
ENST00000618457.5
ENST00000619676.4
CDS GCA 72 bp CCTGGATGTAGGCTGAGAATCTTAAACTCTGTTTGCTaGCCAGCAAAATGGATCATTCAGAAGGCAGGTGTT +
Preference number: 6 (lower is better)
Translates to: PGCRLRILNSVC*PAKWIIQKAGV
Trigger: AACACCTGCCTTCTGAATGATCCATTTTGCTGGGCAGCAAACAGAGTTTAAGATTCTCAGCCTACATCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508107.5
CDS GCA 72 bp ATCCTTTTATTTTTGGCCCAGGAACTGGCGGAAAGATaGAGGTCACCATGCACTAGGTATCTGAATGAAGGT +
Preference number: 6 (lower is better)
Translates to: ILLFLAQELAER*RSPCTRYLNEG
Trigger: ACCTTCATTCAGATACCTAGTGCATGGTGACCTGCATCTTTCCGCCAGTTCCTGGGCCAAAAATAAAAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509934.1
CDS CCA 72 bp GATTTGGTTTACAGCTCATTTGCGGCAGAATCAAAATaGCTCGATTCAAGGCAGCTGTGGTTTCAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: DLVYSSFAAESK*LDSRQLWFQQS
Trigger: GCTTTGCTGAAACCACAGCTGCCTTGAATCGAGCCATTTTGATTCTGCCGCAAATGAGCTGTAAACCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514206.5
CDS CAA 72 bp TTTGATGGTGGTTGGATTTGTTTGATGTGGCTTGATTaGGTTTACAGCTCATTTGCGGCAGAATCAAAATGG +
Preference number: 6 (lower is better)
Translates to: FDGGWICLMWLD*VYSSFAAESKW
Trigger: CCATTTTGATTCTGCCGCAAATGAGCTGTAAACCAAATCAAGCCACATCAAACAAATCCAACCACCATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514206.5
CDS CAA 72 bp AGTTCTTTAGTTGCTTTTGATGGTGGTTGGATTTGTTaGATGTGGCTTGATTTGGTTTACAGCTCATTTGCG +
Preference number: 6 (lower is better)
Translates to: SSLVAFDGGWIC*MWLDLVYSSFA
Trigger: CGCAAATGAGCTGTAAACCAAATCAAGCCACATCAAACAAATCCAACCACCATCAAAAGCAACTAAAGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514206.5