RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRLHR (Homo sapiens)

Ensembl gene IDs: ENSG00000119973

Ensembl transcript IDs: ENST00000239032.4, ENST00000636925.1

Found 262 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTAATATAGCTGCTGGAAGCACAGGAGCCAGTCCTCGGGATGCCTaGGAGATGAGCTTATCTGGGGCAGGGGTGGGTTGCACTATTAGC +
Preference number: 1 (lower is better)
Translates to: SNIAAGSTGASPRDA*EMSLSGAGVGCTIS
Trigger: GCTAATAGTGCAACCCACCCCTGCCCCAGATAAGCTCATCTCCCAGGCATCCCGAGGACTGGCTCCTGTGCTTCCAGCAGCTATATTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp AAGAACCTGCCTTGGGAAACAAAGGTGCTCCTGACCTCTCGTCTGTaGGGGACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTT +
Preference number: 1 (lower is better)
Translates to: KNLPWETKVLLTSRL*GTGPVFTPRSSHTL
Trigger: AAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGTCCCTCACAGACGAGAGGTCAGGAGCACCTTTGTTTCCCAAGGCAGGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp CTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGAAGGGCTaGTGCCAAGTACCAAGTTGGCTCAGTTCCCAGCCTGACTGCCTG +
Preference number: 1 (lower is better)
Translates to: LAKRITEPPISLEKG*CQVPSWLSSQPDCL
Trigger: CAGGCAGTCAGGCTGGGAACTGAGCCAACTTGGTACTTGGCAGCAGCCCTTCTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp GGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTaGGAAGGGCTGCTGCCAAGTACCAAGTTGGCTCAGTTCCCAGCC +
Preference number: 1 (lower is better)
Translates to: GDKACKEDYRTSHQP*EGLLPSTKLAQFPA
Trigger: GGCTGGGAACTGAGCCAACTTGGTACTTGGCAGCAGCCCTTCTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp AAGGTAAATCAATCAAGAACCTGCCTTGGGAAACAAAGGTGCTCCTaGCCTCTCGTCTGTGAGGGACAGGCCCTGTGTTCACTCCCAGAT +
Preference number: 1 (lower is better)
Translates to: KVNQSRTCLGKQRCS*PLVCEGQALCSLPD
Trigger: ATCTGGGAGTGAACACAGGGCCTGTCCCTCACAGACGAGAGGTCAGGAGCACCTTTGTTTCCCAAGGCAGGTTCTTGATTGATTTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CCA 90 bp CCCAAGACTCCTGCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTaGAGACCTTTGTCCCAAGGCACTTGTCCTCATTTACAGAACTCA +
Preference number: 1 (lower is better)
Translates to: PKTPALTAQVAFPTV*RPLSQGTCPHLQNS
Trigger: TGAGTTCTGTAAATGAGGACAAGTGCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGCAGGAGTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp AAGGGCTGCTGCCAAGTACCAAGTTGGCTCAGTTCCCAGCCTGACTaGCTGTATTACTCCTTGCAGGAAGAGGACTGTGTATACATCTTA +
Preference number: 1 (lower is better)
Translates to: KGCCQVPSWLSSQPD*LYYSLQEEDCVYIL
Trigger: TAAGATGTATACACAGTCCTCTTCCTGCAAGGAGTAATACAGGCAGTCAGGCTGGGAACTGAGCCAACTTGGTACTTGGCAGCAGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp AAAGTTCCCCAGGTGATTCTAGGAGCAGCCAGGGTTGAGAACCAGTaGTTCAAACCTTCCAACAAAGAGCCGACGATGAATCAGATCCCT +
Preference number: 1 (lower is better)
Translates to: KVPQVILGAARVENQ*FKPSNKEPTMNQIP
Trigger: AGGGATCTGATTCATCGTCGGCTCTTTGTTGGAAGGTTTGAATCACTGGTTCTCAACCCTGGCTGCTCCTAGAATCACCTGGGGAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp GACAGCTGGATATTATGTATCATTTCCCAAGACTCCTGCCCTCACTaGCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGG +
Preference number: 1 (lower is better)
Translates to: DSWILCIISQDSCPH*PSCFSNSVETFVPR
Trigger: CCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGCAGGAGTCTTGGGAAATGATACATAATATCCAGCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp CATTTAGCACCATTGCCAGAGGTAACCTCCATACCCATCTTTGCCTaGCTTTTCCTTTCTCCCAAGCCAGCCTTTCCTACCCTTTACTGT +
Preference number: 1 (lower is better)
Translates to: HLAPLPEVTSIPIFA*LFLSPKPAFPTLYC
Trigger: ACAGTAAAGGGTAGGAAAGGCTGGCTTGGGAGAAAGGAAAAGGCAGGCAAAGATGGGTATGGAGGTTACCTCTGGCAATGGTGCTAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp ACCCTACAGATGGTGACTGAGTTACTGGGAACACAGAGGCTGATCTaGCAGCTGGATATTATGTATCATTTCCCAAGACTCCTGCCCTCA +
Preference number: 1 (lower is better)
Translates to: TLQMVTELLGTQRLI*QLDIMYHFPRLLPS
Trigger: TGAGGGCAGGAGTCTTGGGAAATGATACATAATATCCAGCTGTCAGATCAGCCTCTGTGTTCCCAGTAACTCAGTCACCATCTGTAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp GCCAACCAGCCCAACCGTGATCACTCCCACTCCCACCATGGTTGTTaGCATGAATGTAATAGGATTGAACCCTTGTCATTCCCATATCAT +
Preference number: 1 (lower is better)
Translates to: ANQPNRDHSHSHHGC*HECNRIEPLSFPYH
Trigger: ATGATATGGGAATGACAAGGGTTCAATCCTATTACATTCATGTCAACAACCATGGTGGGAGTGGGAGTGATCACGGTTGGGCTGGTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp ATATTATGTATCATTTCCCAAGACTCCTGCCCTCACTGCCCAAGTTaGTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCACTTGTCC +
Preference number: 1 (lower is better)
Translates to: ILCIISQDSCPHCPS*FSNSVETFVPRHLS
Trigger: GGACAAGTGCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGCAGGAGTCTTGGGAAATGATACATAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp AGTTCATTTAGCACCATTGCCAGAGGTAACCTCCATACCCATCTTTaGCTGCCTTTTCCTTTCTCCCAAGCCAGCCTTTCCTACCCTTTA +
Preference number: 1 (lower is better)
Translates to: SSFSTIARGNLHTHL*LPFPFSQASLSYPL
Trigger: TAAAGGGTAGGAAAGGCTGGCTTGGGAGAAAGGAAAAGGCAGGCAAAGATGGGTATGGAGGTTACCTCTGGCAATGGTGCTAAATGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp GGTTGCACTATTAGCACACAGGTTCTTTGTTCTCCAATCCACGGATaGAGCTCAAGTTCATTTAGCACCATTGCCAGAGGTAACCTCCAT +
Preference number: 1 (lower is better)
Translates to: GCTISTQVLCSPIHG*SSSSFSTIARGNLH
Trigger: ATGGAGGTTACCTCTGGCAATGGTGCTAAATGAACTTGAGCTTCATCCGTGGATTGGAGAACAAAGAACCTGTGTGCTAATAGTGCAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp CTCTACCATCTACACTCTCCACACATGACCATCAAAGGAACTCTCTaGGGAAATGAGAAATGTCTGGCCCTGAGCCTCCCAAGTAATATA +
Preference number: 1 (lower is better)
Translates to: LYHLHSPHMTIKGTL*GNEKCLALSLPSNI
Trigger: TATATTACTTGGGAGGCTCAGGGCCAGACATTTCTCATTTCCTCAGAGAGTTCCTTTGATGGTCATGTGTGGAGAGTGTAGATGGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp GCCTTTTCCTTTCTCCCAAGCCAGCCTTTCCTACCCTTTACTGTGTaGAAAAAGTCTAGCCCTGTAACTACTAAAGATTCCTATGCCAAC +
Preference number: 1 (lower is better)
Translates to: AFSFLPSQPFLPFTV*KKSSPVTTKDSYAN
Trigger: GTTGGCATAGGAATCTTTAGTAGTTACAGGGCTAGACTTTTTGCACACAGTAAAGGGTAGGAAAGGCTGGCTTGGGAGAAAGGAAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp CCACAGTCTTCACCTTTTCCCTTAACCCTGGAGGTAATTAGTGTTTaGTCTACACATCATGTGGGTGGTAGCTTATTCTTCTGTTCTGTC +
Preference number: 1 (lower is better)
Translates to: PQSSPFPLTLEVISV*STHHVGGSLFFCSV
Trigger: GACAGAACAGAAGAATAAGCTACCACCCACATGATGTGTAGATCAAACACTAATTACCTCCAGGGTTAAGGGAAAAGGTGAAGACTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp CTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTaGCTTGCATTTGAAAGACTAACAGATGTTCAGGAATGCAAACCA +
Preference number: 1 (lower is better)
Translates to: LCSLPDLATLLRLVL*LAFERLTDVQECKP
Trigger: TGGTTTGCATTCCTGAACATCTGTTAGTCTTTCAAATGCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp TGCTATTTCCAGGTAGCTGTTGGAGCATGCATTGAAACACTCTTCTaGCAGTTTAATGAGATAAATCTATTGATTGGCTGCCAAAAGTGT +
Preference number: 1 (lower is better)
Translates to: CYFQVAVGACIETLF*QFNEINLLIGCQKC
Trigger: ACACTTTTGGCAGCCAATCAATAGATTTATCTCATTAAACTGGCAGAAGAGTGTTTCAATGCATGCTCCAACAGCTACCTGGAAATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 90 bp TATTCAGAAAACCAAATATTTGAGTGCCCACTTTGTGGCAAACACTaGATGTGTACCCACACATACACACACATACACAAACACACATAC +
Preference number: 1 (lower is better)
Translates to: YSENQIFECPLCGKH*MCTHTYTHIHKHTY
Trigger: GTATGTGTGTTTGTGTATGTGTGTGTATGTGTGGGTACACATTCAGTGTTTGCCACAAAGTGGGCACTCAAATATTTGGTTTTCTGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 90 bp CTTAGCATCTCTCACAATTGCTATTTCCAGGTAGCTGTTGGAGCATaGATTGAAACACTCTTCTGCCAGTTTAATGAGATAAATCTATTG +
Preference number: 1 (lower is better)
Translates to: LSISHNCYFQVAVGA*IETLFCQFNEINLL
Trigger: CAATAGATTTATCTCATTAAACTGGCAGAAGAGTGTTTCAATGCATGCTCCAACAGCTACCTGGAAATAGCAATTGTGAGAGATGCTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR TCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGGGATGCCTGGGAGATaGGCTTATCTGGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCGMPGR*AYLGQG
Trigger: CCCCTGCCCCAGATAAGCTCATCTCCCAGGCATCCC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp CAAGGACAAGACAGACAGCCGGACAAGAGGGCTGGGCTGGAAATGTaGCCCTATGTTGGCTTAGCTAGCTCTGGTGCTGAGAATAAGCAC +
Preference number: 2 (lower is better)
Translates to: QGQDRQPDKRAGLEM*PYVGLASSGAENKH
Trigger: GTGCTTATTCTCAGCACCAGAGCTAGCTAAGCCAACATAGGGCAACATTTCCAGCCCAGCCCTCTTGTCCGGCTGTCTGTCTTGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGGGAGGCCAGTTGAAGTaGAGCTCCTTGACCAAGGCC +
Preference number: 2 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVGGQLK*SSLTKA
Trigger: GGCCTTGGTCAAGGAGCTCCACTTCAACTGGCCTCC...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCACAAGAGGGCTGGGCTaGAAATGTTGCCCTATGTTG +
Preference number: 2 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGTRGLG*KCCPML
Trigger: CAACATAGGGCAACATTTCCAGCCCAGCCCTCTTGT...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp CCTGCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTaGTCCCAAGGCACTTGTCCTCATTTACAGAACTCACAGGAGGTT +
Preference number: 2 (lower is better)
Translates to: PALTAQVAFPTVWRP*SQGTCPHLQNSQEV
Trigger: AACCTCCTGTGAGTTCTGTAAATGAGGACAAGTGCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR GCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGATTGACCTCGAGTGGTaGCCTAGGAGGCCAGTTGAA +
Preference number: 2 (lower is better)
Translates to: DLVTKLAKRITEPPISLEIDLEW*PRRPVE
Trigger: TTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAAT...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR GCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGACTCCTGCCCTCACTaGCCAAGTTGCTTTTCCAAC +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCDSCPH*PSCFSN
Trigger: GTTGGAAAAGCAACTTGGGCAGTGAGGGCAGGAGTC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR GCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCATTTCCCAAGACTCCTaGCCTCACTGCCCAAGTTGC +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCISQDS*PHCPSC
Trigger: GCAACTTGGGCAGTGAGGGCAGGAGTCTTGGGAAAT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCTGCCAAGTACCAAGTTaGCTCAGTTCCCAGCCTGAC +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCCQVPS*LSSQPD
Trigger: GTCAGGCTGGGAACTGAGCCAACTTGGTACTTGGCA...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCACAGGACAGAGGTCGTaGGTGAGCCTACCTGAGAAA +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCTGQRS*VSLPEK
Trigger: TTTCTCAGGTAGGCTCACCCACGACCTCTGTCCTGT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTACAGATGGTGACTaGGTTACTGGGAACACAGAG +
Preference number: 2 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVPTDGD*VTGNTE
Trigger: CTCTGTGTTCCCAGTAACTCAGTCACCATCTGTAGG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGGAACCCTACAGATGGTaGCTGAGTTACTGGGAACAC +
Preference number: 2 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVEPYRW*LSYWEH
Trigger: GTGTTCCCAGTAACTCAGTCACCATCTGTAGGGTTC...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGACAAAGAGCCGACGATaGATCAGATCCCTCCCCAAA +
Preference number: 2 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVTKSRR*IRSLPK
Trigger: TTTGGGGAGGGATCTGATTCATCGTCGGCTCTTTGT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR GCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGAGGTGTAAGCCACCATaGCCAGCCCTAGAAAGGATA +
Preference number: 2 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVRCKPP*PALERI
Trigger: TATCCTTTCTAGGGCTGGGCATGGTGGCTTACACCT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR GCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGAGTTCCCAGCCTGACTaGCTGTATTACTCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: DLVTKLAKRITEPPISLESSQPD*LYYSLQ
Trigger: CTGCAAGGAGTAATACAGGCAGTCAGGCTGGGAACT...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGAATCAACTAGACTCTTaGGAGGAGAGCCCAGACATC +
Preference number: 2 (lower is better)
Translates to: DLVTKLAKRITEPPISLENQLDS*EESPDI
Trigger: GATGTCTGGGCTCTCCTCCCAAGAGTCTAGTTGATT...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp GATATTATGTATCATTTCCCAAGACTCCTGCCCTCACTGCCCAAGTaGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCACTTGTC +
Preference number: 2 (lower is better)
Translates to: DIMYHFPRLLPSLPK*LFQQCGDLCPKALV
Trigger: GACAAGTGCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGCAGGAGTCTTGGGAAATGATACATAATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCTATAGATGTGAGCCATaGTACCTGGCCATGGTATGT +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCYRCEP*YLAMVC
Trigger: ACATACCATGGCCAGGTACCATGGCTCACATCTATA...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp TGTGAGGGACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTaGAGGTTAGTTTTGTGCCTTGCATTTGAAAGACTAACAGATGTT +
Preference number: 2 (lower is better)
Translates to: CEGQALCSLPDLATL*RLVLCLAFERLTDV
Trigger: AACATCTGTTAGTCTTTCAAATGCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGTCCCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR TCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCACACAGAGGCTGATCTaGCAGCTGGATATTATGTAT +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCTQRLI*QLDIMY
Trigger: ATACATAATATCCAGCTGTCAGATCAGCCTCTGTGT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAACAGATTGACCTCGAGTaGTGCCCTAGGAGGCCAGTT +
Preference number: 2 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEQIDLE*CPRRPV
Trigger: AACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTG...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp TTTGTTCTCCAATCCACGGATGAAGCTCAAGTTCATTTAGCACCATaGCCAGAGGTAACCTCCATACCCATCTTTGCCTGCCTTTTCCTT +
Preference number: 2 (lower is better)
Translates to: FVLQSTDEAQVHLAP*PEVTSIPIFACLFL
Trigger: AAGGAAAAGGCAGGCAAAGATGGGTATGGAGGTTACCTCTGGCAATGGTGCTAAATGAACTTGAGCTTCATCCGTGGATTGGAGAACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGTCCCACCATGGTTGTTaGCATGAATGTAATAGGATT +
Preference number: 2 (lower is better)
Translates to: DLVTKLAKRITEPPISLESHHGC*HECNRI
Trigger: AATCCTATTACATTCATGTCAACAACCATGGTGGGA...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR GCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCAGCATCTCTCACAATTaGTATTTCCAGGTAGCTGTT +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCSISHN*YFQVAV
Trigger: AACAGCTACCTGGAAATAGCAATTGTGAGAGATGCT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGATCTACACATCATGTaGGTGGTAGCTTATTCTTCT +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCDLHIM*VVAYSS
Trigger: AGAAGAATAAGCTACCACCCACATGATGTGTAGATC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGACGGTTATAGGAACTaGAATATCCTTACCTTAGCA +
Preference number: 2 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCDGYRN*NILTLA
Trigger: TGCTAAGGTAAGGATATTCCAGTTCCTATAACCGTC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp GCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTaGTGCCTTGCATTTGAAAGACTAACAGATGTTCAGGAATGCAAA +
Preference number: 2 (lower is better)
Translates to: ALCSLPDLATLLRLV*CLAFERLTDVQECK
Trigger: TTTGCATTCCTGAACATCTGTTAGTCTTTCAAATGCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGATGCAAGGGTTCAAATaGACTAAGCAATATCATGGT +
Preference number: 2 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVMQGFK*TKQYHG
Trigger: ACCATGATATTGCTTAGTCCATTTGAACCCTTGCAT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGAAAACGAAACCCTTTTaGCATATAAAGGTCTTACTC +
Preference number: 2 (lower is better)
Translates to: DLVTKLAKRITEPPISLEKTKPF*HIKVLL
Trigger: GAGTAAGACCTTTATATGCCAAAAGGGTTTCGTTTT...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp GAGCAATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATaGAGTATTCAGAAAACCAAATATTTGAGTGCCCACTTTGTGGCA +
Preference number: 2 (lower is better)
Translates to: EQLETAGECHATQFT*SIQKTKYLSAHFVA
Trigger: TGCCACAAAGTGGGCACTCAAATATTTGGTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAATTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CCA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCCATGGTACTCTCAGCTaGGTCCTTTTTCTAAAGGCA +
Preference number: 2 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRIHGTLS*VLFLKA
Trigger: TGCCTTTAGAAAAAGGACCCAGCTGAGAGTACCATG...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp TGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACCAAATATTaGAGTGCCCACTTTGTGGCAAACACTGAATGTGTACCCACACAT +
Preference number: 2 (lower is better)
Translates to: CHATQFTLSIQKTKY*SAHFVANTECVPTH
Trigger: ATGTGTGGGTACACATTCAGTGTTTGCCACAAAGTGGGCACTCAAATATTTGGTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 90 bp GCATGCATTGAAACACTCTTCTGCCAGTTTAATGAGATAAATCTATaGATTGGCTGCCAAAAGTGTGACCTGGTGACAAAGCTTGCAAAG +
Preference number: 2 (lower is better)
Translates to: ACIETLFCQFNEINL*IGCQKCDLVTKLAK
Trigger: CTTTGCAAGCTTTGTCACCAGGTCACACTTTTGGCAGCCAATCAATAGATTTATCTCATTAAACTGGCAGAAGAGTGTTTCAATGCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR TCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAGGCAATCGTGGTTCTaGAATACTTTTCTGAACGTG +
Preference number: 2 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSERQSWF*NTFLNV
Trigger: CACGTTCAGAAAAGTATTTCAGAACCACGATTGCCT...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCGCCCTAGGAGGCCAGTaGAAGTGGAGCTCCTTGACC +
Preference number: 3 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGALGGQ*KWSSLT
Trigger: GGTCAAGGAGCTCCACTTCAACTGGCCTCCTAGGGC...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 72 bp CCTTGGGAAACAAAGGTGCTCCTGACCTCTCGTCTGTaGGGGACAGGCCCTGTGTTCACTCCCAGATCTAGC +
Preference number: 3 (lower is better)
Translates to: PWETKVLLTSRL*GTGPVFTPRSS
Trigger: GCTAGATCTGGGAGTGAACACAGGGCCTGTCCCTCACAGACGAGAGGTCAGGAGCACCTTTGTTTCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 72 bp GGTGCTGAGAATAAGCACCAGATTGACCTCGAGTGGTaGCCTAGGAGGCCAGTTGAAGTGGAGCTCCTTGAC +
Preference number: 3 (lower is better)
Translates to: GAENKHQIDLEW*PRRPVEVELLD
Trigger: GTCAAGGAGCTCCACTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAGCACC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 72 bp AGGATTACAGAACCTCCCATCAGCCTTGAGAAGGGCTaGTGCCAAGTACCAAGTTGGCTCAGTTCCCAGCCT +
Preference number: 3 (lower is better)
Translates to: RITEPPISLEKG*CQVPSWLSSQP
Trigger: AGGCTGGGAACTGAGCCAACTTGGTACTTGGCAGCAGCCCTTCTCAAGGCTGATGGGAGGTTCTGTAATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCAGAATAAGCACCAGATaGACCTCGAGTGGTGCCCTA +
Preference number: 3 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGRISTR*TSSGAL
Trigger: TAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCT...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 72 bp CCATTGCCAGAGGTAACCTCCATACCCATCTTTGCCTaGCTTTTCCTTTCTCCCAAGCCAGCCTTTCCTACC +
Preference number: 3 (lower is better)
Translates to: PLPEVTSIPIFA*LFLSPKPAFPT
Trigger: GGTAGGAAAGGCTGGCTTGGGAGAAAGGAAAAGGCAGGCAAAGATGGGTATGGAGGTTACCTCTGGCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 72 bp GCCTGGGAGATGAGCTTATCTGGGGCAGGGGTGGGTTaGACTATTAGCACACAGGTTCTTTGTTCTCCAATC +
Preference number: 3 (lower is better)
Translates to: AWEMSLSGAGVG*TISTQVLCSPI
Trigger: GATTGGAGAACAAAGAACCTGTGTGCTAATAGTGCAACCCACCCCTGCCCCAGATAAGCTCATCTCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCAACTTCTGCCGGTCCTaGATTTCTGGGTTGATCATG +
Preference number: 3 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGNFCRS*ISGLIM
Trigger: CATGATCAACCCAGAAATCAAGGACCGGCAGAAGTT...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCAGGGTTTCAACACGTaGGCCAGGCTGGTCTCAAAC +
Preference number: 3 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVQGFNT*ARLVSN
Trigger: GTTTGAGACCAGCCTGGCCAACGTGTTGAAACCCTG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGCTGGGCTGGAAATGTaGCCCTATGTTGGCTTAGCT +
Preference number: 3 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCAGLEM*PYVGLA
Trigger: AGCTAAGCCAACATAGGGCAACATTTCCAGCCCAGC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CCA 72 bp CCTGCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTaGAGACCTTTGTCCCAAGGCACTTGTCCTCATTTA +
Preference number: 3 (lower is better)
Translates to: PALTAQVAFPTV*RPLSQGTCPHL
Trigger: TAAATGAGGACAAGTGCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 72 bp CTACACTCTCCACACATGACCATCAAAGGAACTCTCTaGGGAAATGAGAAATGTCTGGCCCTGAGCCTCCCA +
Preference number: 3 (lower is better)
Translates to: LHSPHMTIKGTL*GNEKCLALSLP
Trigger: TGGGAGGCTCAGGGCCAGACATTTCTCATTTCCTCAGAGAGTTCCTTTGATGGTCATGTGTGGAGAGTGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCCTGTTGGAGCATGCATaGAAACACTCTTCTGCCAGT +
Preference number: 3 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCLLEHA*KHSSAS
Trigger: ACTGGCAGAAGAGTGTTTCAATGCATGCTCCAACAG...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCGACCTCTTAAGTGAATaGGACCTTTTCCTCTTTATT +
Preference number: 3 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGDLLSE*DLFLFI
Trigger: AATAAAGAGGAAAAGGTCCAATTCACTTAAGAGGTC...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCTCCTCTTCCCTCTCTTaGGCCTCCCCCAAGCAAAGA +
Preference number: 3 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRISSSLS*ASPKQR
Trigger: TCTTTGCTTGGGGGAGGCCAAAGAGAGGGAAGAGGA...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGCGTGGAGAAAAAGTTTaGTTTGTCCTTCAAGGGCAT +
Preference number: 3 (lower is better)
Translates to: DLVTKLAKRITEPPISLERGEKV*FVLQGH
Trigger: ATGCCCTTGAAGGACAAACAAAACTTTTTCTCCACG...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGCAGAAAACCAAATATTaGAGTGCCCACTTTGTGGCA +
Preference number: 3 (lower is better)
Translates to: DLVTKLAKRITEPPISLEQKTKY*SAHFVA
Trigger: TGCCACAAAGTGGGCACTCAAATATTTGGTTTTCTG...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 72 bp CCCAACCGTGATCACTCCCACTCCCACCATGGTTGTTaGCATGAATGTAATAGGATTGAACCCTTGTCATTC +
Preference number: 3 (lower is better)
Translates to: PNRDHSHSHHGC*HECNRIEPLSF
Trigger: GAATGACAAGGGTTCAATCCTATTACATTCATGTCAACAACCATGGTGGGAGTGGGAGTGATCACGGTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 72 bp TTGGCAGGTACAACTAAAGCTTCATTCGGATGTTTCTaGGATTCATTAGAAAGAGGATTCCCGCCCCCACCC +
Preference number: 3 (lower is better)
Translates to: LAGTTKASFGCF*DSLERGFPPPP
Trigger: GGGTGGGGGCGGGAATCCTCTTTCTAATGAATCTCAGAAACATCCGAATGAAGCTTTAGTTGTACCTGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 72 bp GACAGCTGGATATTATGTATCATTTCCCAAGACTCCTaGCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTG +
Preference number: 3 (lower is better)
Translates to: DSWILCIISQDS*PHCPSCFSNSV
Trigger: CACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGCAGGAGTCTTGGGAAATGATACATAATATCCAGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 72 bp CTCTCCTTCCCCTCTACCATCTACACTCTCCACACATaGCCATCAAAGGAACTCTCTGAGGAAATGAGAAAT +
Preference number: 3 (lower is better)
Translates to: LSFPSTIYTLHT*PSKELSEEMRN
Trigger: ATTTCTCATTTCCTCAGAGAGTTCCTTTGATGGTCATGTGTGGAGAGTGTAGATGGTAGAGGGGAAGGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR-3UTR CAA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCATGAATGTAATAGGATaGAACCCTTGTCATTCCCAT +
Preference number: 3 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCMNVIG*NPCHSH
Trigger: ATGGGAATGACAAGGGTTCAATCCTATTACATTCAT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 72 bp ATGGTGACTGAGTTACTGGGAACACAGAGGCTGATCTaGCAGCTGGATATTATGTATCATTTCCCAAGACTC +
Preference number: 3 (lower is better)
Translates to: MVTELLGTQRLI*QLDIMYHFPRL
Trigger: GAGTCTTGGGAAATGATACATAATATCCAGCTGTCAGATCAGCCTCTGTGTTCCCAGTAACTCAGTCACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CCA 72 bp CTGTCCTTAAGTAAACTTCTGCCGGTCCTTGATTTCTaGGTTGATCATGTTCCAAGAATCACTACAGAGCAG +
Preference number: 3 (lower is better)
Translates to: LSLSKLLPVLDF*VDHVPRITTEQ
Trigger: CTGCTCTGTAGTGATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAAGGACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 72 bp CTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTaGCTTGCATTTGAAAGACTAACAGATGTTCAGGAA +
Preference number: 3 (lower is better)
Translates to: LPDLATLLRLVL*LAFERLTDVQE
Trigger: TTCCTGAACATCTGTTAGTCTTTCAAATGCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 72 bp TCACCTTTTCCCTTAACCCTGGAGGTAATTAGTGTTTaGTCTACACATCATGTGGGTGGTAGCTTATTCTTC +
Preference number: 3 (lower is better)
Translates to: SPFPLTLEVISV*STHHVGGSLFF
Trigger: GAAGAATAAGCTACCACCCACATGATGTGTAGATCAAACACTAATTACCTCCAGGGTTAAGGGAAAAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 72 bp CAGGTAGCTGTTGGAGCATGCATTGAAACACTCTTCTaGCAGTTTAATGAGATAAATCTATTGATTGGCTGC +
Preference number: 3 (lower is better)
Translates to: QVAVGACIETLF*QFNEINLLIGC
Trigger: GCAGCCAATCAATAGATTTATCTCATTAAACTGGCAGAAGAGTGTTTCAATGCATGCTCCAACAGCTACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR TCA 72 bp AACCAAATATTTGAGTGCCCACTTTGTGGCAAACACTaGATGTGTACCCACACATACACACACATACACAAA +
Preference number: 3 (lower is better)
Translates to: NQIFECPLCGKH*MCTHTYTHIHK
Trigger: TTTGTGTATGTGTGTGTATGTGTGGGTACACATTCAGTGTTTGCCACAAAGTGGGCACTCAAATATTTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR GCA 72 bp TCTCACAATTGCTATTTCCAGGTAGCTGTTGGAGCATaGATTGAAACACTCTTCTGCCAGTTTAATGAGATA +
Preference number: 3 (lower is better)
Translates to: SHNCYFQVAVGA*IETLFCQFNEI
Trigger: TATCTCATTAAACTGGCAGAAGAGTGTTTCAATGCATGCTCCAACAGCTACCTGGAAATAGCAATTGTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCGAAGGGCGTGACGGCTaGAGCGTCCGCGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGEGRDG*SVRASH
Trigger: GTGGCTGGCGCGGACGCTCCAGCCGTCACGCCCTTC...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCGCCCCGAGTGGTCGATaGGGCCATGGCCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGAPSGR*GHGHLG
Trigger: TCCCAGGTGGCCATGGCCTCATCGACCACTCGGGGC...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCCCCTGGGGCCCCGAGTaGTCGATGAGGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGPWGPE*SMRPWP
Trigger: TGGCCATGGCCTCATCGACCACTCGGGGCCCCAGGG...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCCGCAGGCGGTGCACATaGGCACGTCGGACAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGRRRCT*ARRTRP
Trigger: TGGCCTTGTCCGACGTGCTCATGTGCACCGCCTGCG...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCAGGCATAGGCCAGCGTaGGCGGCACGCAGGCGGTGC +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCRHRPA*AARRRC
Trigger: GCACCGCCTGCGTGCCGCTCACGCTGGCCTATGCCT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGCACAGCGTAGGCGCTaGGGCGCAGCGAGATGCGCC +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCAQRRR*GAARCA
Trigger: GGCGCATCTCGCTGCGCCTCAGCGCCTACGCTGTGC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCAGCAAGCAGAAGGTaGGCCGGCGCCGAGCGCGGT +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVPASRR*AGAERG
Trigger: ACCGCGCTCGGCGCCGGCGCACCTTCTGCTTGCTGG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCAGGAAGAAGACCAGGTaGCACAGGCCGCCGCCGAAC +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGRKKTR*HRPPPN
Trigger: GTTCGGCGGCGGCCTGTGCCACCTGGTCTTCTTCCT...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCAGTCGGCCTGGCTCTaGGTCACGCAGCCCGGCACC +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVQSAWL*VTQPGT
Trigger: GGTGCCGGGCTGCGTGACCCAGAGCCAGGCCGACTG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGCGGTCCCAGTCGGCCTaGCTCTGGGTCACGCAGCCC +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLERSQSA*LWVTQP
Trigger: GGGCTGCGTGACCCAGAGCCAGGCCGACTGGGACCG...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGAGGCGTAAGGGTCGATaGCGTGGGGGTCGAGGTCCC +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKRRKGR*RGGRGP
Trigger: GGGACCTCGACCCCCACGCCATCGACCCTTACGCCT...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCTGGTCGATGAGGCCATaGCCACCTGGGAGTGGGGTT +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGWSMRP*PPGSGV
Trigger: AACCCCACTCCCAGGTGGCCATGGCCTCATCGACCA...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCGGACAGCGCCCAGATaGCCAGCACAGCGTAGGCGC +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVRTAPR*PAQRRR
Trigger: GCGCCTACGCTGTGCTGGCCATCTGGGCGCTGTCCG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCTCTGCCCACGTCGGTaGTCCGGTCTCGCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVLCPRR*SGLASP
Trigger: CGGAGAAGCGAGACCGGATCACCGACGTGGGCAGAG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCGTCATATTCTGGCCATaGGGGGCTATCTTGCGGGGC +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGVIFWP*GAILRG
Trigger: GCCCCGCAAGATAGCCCCCCATGGCCAGAATATGAC...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 72 bp ACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTaGAAGTGGAGCTCCTTGACCAAGGCCTGGCTAAGT +
Preference number: 4 (lower is better)
Translates to: TRLTSSGALGGQ*KWSSLTKAWLS
Trigger: ACTTAGCCAGGCCTTGGTCAAGGAGCTCCACTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACGGTTGGCGGGAGTTGTaGCCGCCGGCGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENGWREL*PPAAAQ
Trigger: CTGGGCTGCCGCCGGCGGTCACAACTCCCGCCAACC...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGGCAGCCAGGCGTAGATaGAGGGGTTGTAGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLEAARRR*RGCSRP
Trigger: CGGCCTGCTACAACCCCTTCATCTACGCCTGGCTGC...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGGGGATGCCTGGGAGATaGGCTTATCTGGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLEGMPGR*AYLGQG
Trigger: CCCCTGCCCCAGATAAGCTCATCTCCCAGGCATCCC...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGGGGCAGAATTTCTGCTaGCCCTCGGTAGTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKGQNFC*PSVVLC
Trigger: GCAGAGGACTACCGAGGGCCAGCAGAAATTCTGCCC...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGAGGCCTCTGCGCTCTaGTTGGCGGGAGTTGTGACC +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCEASAL*LAGVVT
Trigger: GGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGACCAGCTGCAGGCTCTaGAAGGGCGTGACGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVTSCRL*KGVTAG
Trigger: TCCAGCCGTCACGCCCTTCCAGAGCCTGCAGCTGGT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGGAACACCCAGCCGCGTaGCTCGAAGGCATAGGCCAG +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVEHPAA*LEGIGQ
Trigger: CTGGCCTATGCCTTCGAGCCACGCGGCTGGGTGTTC...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGCTCATGGCGAGCCAGTaGCAGAGCAGCTGCACCAGC +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLELMASQ*QSSCTS
Trigger: GCTGGTGCAGCTGCTCTGCCACTGGCTCGCCATGAG...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCCAAGGCCTGGCTAAGTaGCATCAGATGACCACGCTG +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGQGLAK*HQMTTL
Trigger: CAGCGTGGTCATCTGATGCCACTTAGCCAGGCCTTG...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGGGAGGCCAGTTGAAGTaGAGCTCCTTGACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKGGQLK*SSLTKA
Trigger: GGCCTTGGTCAAGGAGCTCCACTTCAACTGGCCTCC...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCGGCTCTGGAAGGGCGTaGCGGCTGGAGCGTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRIGSGRA*RLERPR
Trigger: GCGCGGACGCTCCAGCCGTCACGCCCTTCCAGAGCC...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGATCAGCCCCTTCAGCTaGTGCACCAGCTGCAGGCTC +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLEISPFS*CTSCRL
Trigger: GAGCCTGCAGCTGGTGCATCAGCTGAAGGGGCTGAT...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGCACGTCGTGCGGCTTaGGCTCCACGTGATAGGTGT +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCARRAA*APRDRC
Trigger: ACACCTATCACGTGGAGCTCAAGCCGCACGACGTGC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAACAGCCACCGACCCGTTaGCCGCCGAGGCCTCTGCGC +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEQPPTR*PPRPLR
Trigger: GCGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGCTG...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGAGCCAGTCCTCGGGATaGCTGGGAGATGAGCTTATC +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKSQSSG*LGDELI
Trigger: GATAAGCTCATCTCCCAGGCATCCCGAGGACTGGCT...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCCTTGAGAAGGGCTGCTaGCAAGTACCAAGTTGGCTC +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGLEKGC*QVPSWL
Trigger: GAGCCAACTTGGTACTTGGCAGCAGCCCTTCTCAAG...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCAGCCTTGAGAAGGGCTaGTGCCAAGTACCAAGTTGG +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGSLEKG*CQVPSW
Trigger: CCAACTTGGTACTTGGCAGCAGCCCTTCTCAAGGCT...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGCCGACACATAGACGGTaGCCGGCTGCAGGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLEPTHRR*PAAGRR
Trigger: TCTTCTTCCTGCAGCCGGTCACCGTCTATGTGTCGG...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCGTAAGACAGGAGGATaGCCAGCAGAGGGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVRKTGG*PAEGAG
Trigger: ACCTGCTCCCTCTGCTGGTCATCCTCCTGTCTTACG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGGTTGCGGAGCTTCACTaGCACCCGGACGTAAGACAG +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVVAELH*HPDVRQ
Trigger: CTGTCTTACGTCCGGGTGTCAGTGAAGCTCCGCAAC...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAGCCCGCCGAGGCCTCTaGGCTCTGGTTGGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEARRGL*ALVGGS
Trigger: ACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGC...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCAAGCGACCAACAGTTTaGGCAGCTCCTCGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCKRPTV*AAPRGS
Trigger: GCTTCCGCGAGGAGCTGCGCAAACTGTTGGTCGCTT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGATGGCCACCTGGGAGTaGGGTTTGGAGAGCGGGAAA +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVMATWE*GLESGK
Trigger: TTTCCCGCTCTCCAAACCCCACTCCCAGGTGGCCAT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCGCTTTTCCAACAGTGTaGAGACCTTTGTCCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGAFPTV*RPLSQG
Trigger: GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGC...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAGAGGGAGCAGGTAGGTaGCCAGCAGCAGCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEEGAGR*PAAAPR
Trigger: CCTGGGGGCTGCTGCTGGTCACCTACCTGCTCCCTC...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAGGTCCCGCAGCAGGTTaGAGACGTGCAGCGGCAGCC +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEGPAAG*RRAAAA
Trigger: GGCTGCCGCTGCACGTCTTCAACCTGCTGCGGGACC...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGCCTACAGATGGTGACTaGGTTACTGGGAACACAGAG +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKPTDGD*VTGNTE
Trigger: CTCTGTGTTCCCAGTAACTCAGTCACCATCTGTAGG...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGAAGGGGCAGAATTTCTaGTGGCCCTCGGTAGTCCTC +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVKGQNF*WPSVVL
Trigger: GAGGACTACCGAGGGCCAGCAGAAATTCTGCCCCTT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACGCACCAGCAGGCAGTTaGCCACCAGCCCCACGACCA +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENAPAGS*PPAPRP
Trigger: TGGTCGTGGGGCTGGTGGGCAACTGCCTGCTGGTGC...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACAAGTTCGTCACGTTGTaGAGCCGGCGCACCCGCGCG +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENKFVTL*SRRTRA
Trigger: CGCGCGGGTGCGCCGGCTGCACAACGTGACGAACTT...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACCCGGCACCACGCGGTTaGGGAGCTTCACTGACACCC +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENPAPRG*GASLTP
Trigger: GGGTGTCAGTGAAGCTCCGCAACCGCGTGGTGCCGG...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGAGTTCCCAGCCTGACTaGCTGTATTACTCCTTGCAG +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKSSQPD*LYYSLQ
Trigger: CTGCAAGGAGTAATACAGGCAGTCAGGCTGGGAACT...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGAGTCCTCGGGATGCCTaGGAGATGAGCTTATCTGGG +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVSPRDA*EMSLSG
Trigger: CCCAGATAAGCTCATCTCCCAGGCATCCCGAGGACT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGAGGAGCAGCCAGGGTTaGGAACCAGTGATTCAAACC +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVRSSQG*EPVIQT
Trigger: GGTTTGAATCACTGGTTCTCAACCCTGGCTGCTCCT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGTGGCTGCCAAAAGTGTaGCCTGGTGACAAAGCTTGC +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLEWLPKV*PGDKAC
Trigger: GCAAGCTTTGTCACCAGGTCACACTTTTGGCAGCCA...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGATTGACCTCGAGTGGTaGCCTAGGAGGCCAGTTGAA +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVIDLEW*PRRPVE
Trigger: TTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAAT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGGAGACTGCAGGAGAATaGCACGCTACACAGTTTACA +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKETAGE*HATQFT
Trigger: TGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTC...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGGACTCCTGCCCTCACTaGCCAAGTTGCTTTTCCAAC +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVDSCPH*PSCFSN
Trigger: GTTGGAAAAGCAACTTGGGCAGTGAGGGCAGGAGTC...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGATTTCCCAAGACTCCTaGCCTCACTGCCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVISQDS*PHCPSC
Trigger: GCAACTTGGGCAGTGAGGGCAGGAGTCTTGGGAAAT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGAATCAACTAGACTCTTaGGAGGAGAGCCCAGACATC +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKNQLDS*EESPDI
Trigger: GATGTCTGGGCTCTCCTCCCAAGAGTCTAGTTGATT...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 72 bp AGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTaGAGAAGGGCTGCTGCCAAGTACCAAGTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: SLQRGLQNLPSA*RRAAAKYQVGS
Trigger: TGAGCCAACTTGGTACTTGGCAGCAGCCCTTCTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGTGTTGGAGCATGCATTaGAACACTCTTCTGCCAGTT +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKCWSMH*NTLLPV
Trigger: AACTGGCAGAAGAGTGTTTCAATGCATGCTCCAACA...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACCTGACCTCTCGTCTGTaGGGGACAGGCCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENLTSRL*GTGPVF
Trigger: GAACACAGGGCCTGTCCCTCACAGACGAGAGGTCAG...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCTCGGTCCCCCAAAATaGTGGGATTACAGGTGTAAG +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVLGPPK*WDYRCK
Trigger: CTTACACCTGTAATCCCAGCATTTTGGGGGACCGAG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGGTAGCTGTTGGAGCATaGATTGAAACACTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKVAVGA*IETLFC
Trigger: GCAGAAGAGTGTTTCAATGCATGCTCCAACAGCTAC...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAGAGGCCATGGCCACCTaGGAGTGGGGTTTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEEAMAT*EWGLES
Trigger: GCTCTCCAAACCCCACTCCCAGGTGGCCATGGCCTC...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACAGCAGGCCGAACTCATaGCGAGCCAGTGGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENSRPNS*RASGRA
Trigger: TGCTCTGCCACTGGCTCGCCATGAGTTCGGCCTGCT...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGACAAGAGGGCTGGGCTaGAAATGTTGCCCTATGTTG +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLETRGLG*KCCPML
Trigger: CAACATAGGGCAACATTTCCAGCCCAGCCCTCTTGT...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGCCGGTCCTTGATTTCTaGGTTGATCATGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKPVLDF*VDHVPR
Trigger: TCTTGGAACATGATCAACCCAGAAATCAAGGACCGG...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGAGGGTTTCAACACGTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVRVSTR*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGCCAACGTGTTGAAACCCT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGTATAGATGTGAGCCATaGTACCTGGCCATGGTATGT +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKYRCEP*YLAMVC
Trigger: ACATACCATGGCCAGGTACCATGGCTCACATCTATA...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 72 bp TATCATTTCCCAAGACTCCTGCCCTCACTGCCCAAGTaGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: YHFPRLLPSLPK*LFQQCGDLCPK
Trigger: CTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGCAGGAGTCTTGGGAAATGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGAGGCAATCGTGGTTCTaGAATACTTTTCTGAACGTG +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKRQSWF*NTFLNV
Trigger: CACGTTCAGAAAAGTATTTCAGAACCACGATTGCCT...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGAGCTGGGAAAGTAGTTaGACCCTACAGATGGTGACT +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLESWESS*TLQMVT
Trigger: AGTCACCATCTGTAGGGTTCAACTACTTTCCCAGCT...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGAGGAGGTGAAACAGTaGTTCTTGTGTTCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCEEVKQ*FLCSVS
Trigger: GCTCACTGAACACAAGAATCACTGTTTCACCTCCTC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAACAACCAGCCCAACCGTaGTCACTCCCACTCCCACCA +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEQPAQP*SLPLPP
Trigger: TGGTGGGAGTGGGAGTGATCACGGTTGGGCTGGTTG...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGAACTCTCTGAGGAAATaGGAAATGTCTGGCCCTGAG +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVNSLRK*EMSGPE
Trigger: CTCAGGGCCAGACATTTCTCATTTCCTCAGAGAGTT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGGTGGGTGAGCCTACCTaGGAAAATAAACCTGGAACT +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLEVGEPT*ENKPGT
Trigger: AGTTCCAGGTTTATTTTCTCAGGTAGGCTCACCCAC...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGGAGGTAATTAGTGTTTaGTCTACACATCATGTGGGT +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKEVISV*STHHVG
Trigger: ACCCACATGATGTGTAGATCAAACACTAATTACCTC...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGATCAAAGGAACTCTCTaGGGAAATGAGAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LRISTRLTSSGALGGQLKIKGTL*GNEKCL
Trigger: CAGACATTTCTCATTTCCTCAGAGAGTTCCTTTGAT...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGTACACTCTCCACACATaGCCATCAAAGGAACTCTCT +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVYTLHT*PSKELS
Trigger: AGAGAGTTCCTTTGATGGTCATGTGTGGAGAGTGTA...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAGACGTAGCGGTCCACTaGGATGGTGGTGAGCGTGAA +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEDVAVH*DGGERE
Trigger: TTCACGCTCACCACCATCGCAGTGGACCGCTACGTC...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCATCAGCCTGGTATCATaGTCCACAGTCTTCACCTTT +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCISLVS*STVFTF
Trigger: AAAGGTGAAGACTGTGGAGCATGATACCAGGCTGAT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCGCCTGTATTACTCCTTaGAGGAAGAGGACTGTGTAT +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCACITP*RKRTVY
Trigger: ATACACAGTCCTCTTCCTGCAAGGAGTAATACAGGC...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACCAGATTGACCTCGAGTaGTGCCCTAGGAGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENQIDLE*CPRRPV
Trigger: AACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTG...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCGCCGGACAAGAGGGCTaGGCTGGAAATGTTGCCCTA +
Preference number: 4 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRIAGQEG*AGNVAL
Trigger: TAGGGCAACATTTCCAGCCCAGCCCTCTTGTCCGGC...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCCTACGCAGTTCTCTCTaGGACTCACCTCTGATTTTT +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCLRSSL*DSPLIF
Trigger: AAAAATCAGAGGTGAGTCCCAGAGAGAACTGCGTAG...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGGTAGAGCTTCACATGTaGTTCAGCAACACATGCATT +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLEVELHM*FSNTCI
Trigger: AATGCATGTGTTGCTGAATCACATGTGAAGCTCTAC...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGCTACCCTTTACTGTGTaGAAAAAGTCTAGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: DLVTKLAKRITEPPISLELPFTV*KKSSPV
Trigger: TACAGGGCTAGACTTTTTGCACACAGTAAAGGGTAG...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGAATCTATTGATTGGCTaGCAAAAGTGTGACCTGGTG +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVNLLIG*QKCDLV
Trigger: CACCAGGTCACACTTTTGGCAGCCAATCAATAGATT...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAATAAGTCAGAAACCCTaGGGCCCCGAGTGGTCGATG +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEISQKP*GPEWSM
Trigger: CATCGACCACTCGGGGCCCCAGGGTTTCTGACTTAT...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCAAAACGAAACCCTTTTaGCATATAAAGGTCTTACTC +
Preference number: 4 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGKTKPF*HIKVLL
Trigger: GAGTAAGACCTTTATATGCCAAAAGGGTTTCGTTTT...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACACAGGACAGAGGTCGTaGGTGAGCCTACCTGAGAAA +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENTGQRS*VSLPEK
Trigger: TTTCTCAGGTAGGCTCACCCACGACCTCTGTCCTGT...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 72 bp ACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTaGTCCCAAGGCACTTGTCCTCATTTACAGAACTCA +
Preference number: 4 (lower is better)
Translates to: TAQVAFPTVWRP*SQGTCPHLQNS
Trigger: TGAGTTCTGTAAATGAGGACAAGTGCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCTCCCACCATGGTTGTTaGCATGAATGTAATAGGATT +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCSHHGC*HECNRI
Trigger: AATCCTATTACATTCATGTCAACAACCATGGTGGGA...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCAAACAAAGGTGCTCCTaGCCTCTCGTCTGTGAGGGA +
Preference number: 4 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRIKQRCS*PLVCEG
Trigger: TCCCTCACAGACGAGAGGTCAGGAGCACCTTTGTTT...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACCCTCACTGCCCAAGTTaGTTTTCCAACAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENPHCPS*FSNSVE
Trigger: CTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGG...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAACAACCTCTGCCTCCCTaGGTTCAAGCAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEQPLPP*VQAILL
Trigger: CAGGAGAATTGCTTGAACCCAGGGAGGCAGAGGTTG...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGGGTCTCCCAAAGTTTTaGAATTATAGATGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVGLPKF*NYRCEP
Trigger: TGGCTCACATCTATAATTCCAAAACTTTGGGAGACC...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAACAAAGAGCCGACGATaGATCAGATCCCTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSETKSRR*IRSLPK
Trigger: TTTGGGGAGGGATCTGATTCATCGTCGGCTCTTTGT...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCATGCAAGGGTTCAAATaGACTAAGCAATATCATGGT +
Preference number: 4 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCMQGFK*TKQYHG
Trigger: ACCATGATATTGCTTAGTCCATTTGAACCCTTGCAT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACTCCCCTGAAGTGCTTTaGAAAATGCTAGTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENSPEVL*KMLVSR
Trigger: CCTGGACACTAGCATTTTCCAAAGCACTTCAGGGGA...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACTCAGATGACAGCTGTTaGTCTGTTGCAAGTGAGCAA +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENSDDSC*SVASEQ
Trigger: TTGCTCACTTGCAACAGATCAACAGCTGTCATCTGA...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAATGGGAACACAGAGGCTaGTCTGACAGCTGGATATTA +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEWEHRG*SDSWIL
Trigger: TAATATCCAGCTGTCAGATCAGCCTCTGTGTTCCCA...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACCATGGTACTCTCAGCTaGGTCCTTTTTCTAAAGGCA +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENHGTLS*VLFLKA
Trigger: TGCCTTTAGAAAAAGGACCCAGCTGAGAGTACCATG...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCATCAAGAACCTGCCTTaGGAAACAAAGGTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRIIKNLP*ETKVLL
Trigger: CAGGAGCACCTTTGTTTCCCAAGGCAGGTTCTTGAT...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 72 bp ACTCCCACCATGGTTGTTGACATGAATGTAATAGGATaGAACCCTTGTCATTCCCATATCATCCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TPTMVVDMNVIG*NPCHSHIIPLS
Trigger: GGAAAGAGGGATGATATGGGAATGACAAGGGTTCAATCCTATTACATTCATGTCAACAACCATGGTGGGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAATCTCCAATCCACGGATaGAGCTCAAGTTCATTTAGC +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSESPIHG*SSSSFS
Trigger: GCTAAATGAACTTGAGCTTCATCCGTGGATTGGAGA...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCAAAAGTGTGACCTGGTaGCAAAGCTTGCAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRIKSVTW*QSLQRG
Trigger: TCCTCTTTGCAAGCTTTGTCACCAGGTCACACTTTT...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAACCTGGTGACAAAGCTTaGAAAGAGGATTACAGAACC +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSEPGDKA*KEDYRT
Trigger: GGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGG...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR TCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAACACAGAGGCTGATCTaGCAGCTGGATATTATGTAT +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSETQRLI*QLDIMY
Trigger: ATACATAATATCCAGCTGTCAGATCAGCCTCTGTGT...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACGACGGTTATAGGAACTaGAATATCCTTACCTTAGCA +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENDGYRN*NILTLA
Trigger: TGCTAAGGTAAGGATATTCCAGTTCCTATAACCGTC...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACCAAATATTTGAGTaGCCACTTTGTGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSENQIFE*PLCGKH
Trigger: GTGTTTGCCACAAAGTGGGCACTCAAATATTTGGTT...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAGCATCTCTCACAATTaGTATTTCCAGGTAGCTGTT +
Preference number: 4 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSESISHN*YFQVAV
Trigger: AACAGCTACCTGGAAATAGCAATTGTGAGAGATGCT...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR GCA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACTTGAGGTTAGTTTTGTaGCTTGCATTTGAAAGACTA +
Preference number: 4 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENLRLVL*LAFERL
Trigger: TAGTCTTTCAAATGCAAGGCACAAAACTAACCTCAA...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 72 bp AACACCGTCAAATTCAGCTCCAAATTATTAACACCTTaGGCAGGTACAACTAAAGCTTCATTCGGATGTTTC +
Preference number: 4 (lower is better)
Translates to: NTVKFSSKLLTP*AGTTKASFGCF
Trigger: GAAACATCCGAATGAAGCTTTAGTTGTACCTGCCAAAGGTGTTAATAATTTGGAGCTGAATTTGACGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
3UTR CAA 72 bp ACACAGTTTACATTGAGTATTCAGAAAACCAAATATTaGAGTGCCCACTTTGTGGCAAACACTGAATGTGTA +
Preference number: 4 (lower is better)
Translates to: TQFTLSIQKTKY*SAHFVANTECV
Trigger: TACACATTCAGTGTTTGCCACAAAGTGGGCACTCAAATATTTGGTTTTCTGAATACTCAATGTAAACTGTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS GCA 90 bp TGGAGCGTCCGCGCCAGCCACCGACCCGTTGCCCGCCGAGGCCTCTaGGCTCTGGTTGGCGGGAGTTGTGACCGCCGGCGGCAGCCCAGA +
Preference number: 5 (lower is better)
Translates to: WSVRASHRPVARRGL*ALVGGSCDRRRQPR
Trigger: TCTGGGCTGCCGCCGGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGCTGGCGCGGACGCTCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 90 bp CAGAAGGTGCGCCGGCGCCGAGCGCGGTCCCAGTCGGCCTGGCTCTaGGTCACGCAGCCCGGCACCACGCGGTTGCGGAGCTTCACTGAC +
Preference number: 5 (lower is better)
Translates to: QKVRRRRARSQSAWL*VTQPGTTRLRSFTD
Trigger: GTCAGTGAAGCTCCGCAACCGCGTGGTGCCGGGCTGCGTGACCCAGAGCCAGGCCGACTGGGACCGCGCTCGGCGCCGGCGCACCTTCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 90 bp AGCAAGCAGAAGGTGCGCCGGCGCCGAGCGCGGTCCCAGTCGGCCTaGCTCTGGGTCACGCAGCCCGGCACCACGCGGTTGCGGAGCTTC +
Preference number: 5 (lower is better)
Translates to: SKQKVRRRRARSQSA*LWVTQPGTTRLRSF
Trigger: GAAGCTCCGCAACCGCGTGGTGCCGGGCTGCGTGACCCAGAGCCAGGCCGACTGGGACCGCGCTCGGCGCCGGCGCACCTTCTGCTTGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 90 bp TCAGCCCCTTCAGCTGATGCACCAGCTGCAGGCTCTGGAAGGGCGTaGCGGCTGGAGCGTCCGCGCCAGCCACCGACCCGTTGCCCGCCG +
Preference number: 5 (lower is better)
Translates to: SAPSADAPAAGSGRA*RLERPRQPPTRCPP
Trigger: CGGCGGGCAACGGGTCGGTGGCTGGCGCGGACGCTCCAGCCGTCACGCCCTTCCAGAGCCTGCAGCTGGTGCATCAGCTGAAGGGGCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 90 bp CTTCAGCTGATGCACCAGCTGCAGGCTCTGGAAGGGCGTGACGGCTaGAGCGTCCGCGCCAGCCACCGACCCGTTGCCCGCCGAGGCCTC +
Preference number: 5 (lower is better)
Translates to: LQLMHQLQALEGRDG*SVRASHRPVARRGL
Trigger: GAGGCCTCGGCGGGCAACGGGTCGGTGGCTGGCGCGGACGCTCCAGCCGTCACGCCCTTCCAGAGCCTGCAGCTGGTGCATCAGCTGAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 90 bp CCTGGGAGCCCCAGAACTCCTCGCAGAGGCGCACGTCGTGCGGCTTaGGCTCCACGTGATAGGTGTGCACGGCGGCGGGCAGCGCCAGCA +
Preference number: 5 (lower is better)
Translates to: PGSPRTPRRGARRAA*APRDRCARRRAAPA
Trigger: TGCTGGCGCTGCCCGCCGCCGTGCACACCTATCACGTGGAGCTCAAGCCGCACGACGTGCGCCTCTGCGAGGAGTTCTGGGGCTCCCAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 90 bp TCCGCGCCAGCCACCGACCCGTTGCCCGCCGAGGCCTCTGCGCTCTaGTTGGCGGGAGTTGTGACCGCCGGCGGCAGCCCAGAAAATAAG +
Preference number: 5 (lower is better)
Translates to: SAPATDPLPAEASAL*LAGVVTAGGSPENK
Trigger: CTTATTTTCTGGGCTGCCGCCGGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGCTGGCGCGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 90 bp GAAGAAGACCAGGTGGCACAGGCCGCCGCCGAACACCCAGCCGCGTaGCTCGAAGGCATAGGCCAGCGTGAGCGGCACGCAGGCGGTGCA +
Preference number: 5 (lower is better)
Translates to: EEDQVAQAAAEHPAA*LEGIGQRERHAGGA
Trigger: TGCACCGCCTGCGTGCCGCTCACGCTGGCCTATGCCTTCGAGCCACGCGGCTGGGTGTTCGGCGGCGGCCTGTGCCACCTGGTCTTCTTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS GCA 90 bp TGTGCAGCCGGCGCACCCGCGCGATCACCAGCACCAGCAGGCAGTTaGCCACCAGCCCCACGACCACCACGACGCTGTAGAGCAGCACGA +
Preference number: 5 (lower is better)
Translates to: CAAGAPARSPAPAGS*PPAPRPPRRCRAAR
Trigger: TCGTGCTGCTCTACAGCGTCGTGGTGGTCGTGGGGCTGGTGGGCAACTGCCTGCTGGTGCTGGTGATCGCGCGGGTGCGCCGGCTGCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 90 bp ACCCGTTGCCCGCCGAGGCCTCTGCGCTCTGGTTGGCGGGAGTTGTaGCCGCCGGCGGCAGCCCAGAAAATAAGTCAGAAACCCTGGGGC +
Preference number: 5 (lower is better)
Translates to: TRCPPRPLRSGWREL*PPAAAQKISQKPWG
Trigger: GCCCCAGGGTTTCTGACTTATTTTCTGGGCTGCCGCCGGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS-3UTR CAA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCGCCTCTGCGCTCTGGTaGGCGGGAGTTGTGACCGCC +
Preference number: 5 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGASALW*AGVVTA
Trigger: GGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGC...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGCCAGCCACCGACCCGTaGCCCGCCGAGGCCTCTGCG +
Preference number: 5 (lower is better)
Translates to: DLVTKLAKRITEPPISLEPATDP*PAEASA
Trigger: CGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGCTGG...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS GCA 90 bp GCCATGGCCACCTGTTCAAAGGTAATCAAAGTCCGTCACTTCCCTTaGCATACTCCATCCGACCTCCTACACCAGCCGCGCCCCTCCCCC +
Preference number: 5 (lower is better)
Translates to: AMATCSKVIKVRHFP*HTPSDLLHQPRPSP
Trigger: GGGGGAGGGGCGCGGCTGGTGTAGGAGGTCGGATGGAGTATGGCAAGGGAAGTGACGGACTTTGATTACCTTTGAACAGGTGGCCATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636925.1
CDS CCA 90 bp GCTAAGTGGCATCAGATGACCACGCTGACGGTCATATTCTGGCCATaGGGGGCTATCTTGCGGGGCCAAGCGACCAACAGTTTGCGCAGC +
Preference number: 5 (lower is better)
Translates to: AKWHQMTTLTVIFWP*GAILRGQATNSLRS
Trigger: GCTGCGCAAACTGTTGGTCGCTTGGCCCCGCAAGATAGCCCCCCATGGCCAGAATATGACCGTCAGCGTGGTCATCTGATGCCACTTAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 90 bp AGGAGGCCAGTTGAAGTGGAGCTCCTTGACCAAGGCCTGGCTAAGTaGCATCAGATGACCACGCTGACGGTCATATTCTGGCCATGGGGG +
Preference number: 5 (lower is better)
Translates to: RRPVEVELLDQGLAK*HQMTTLTVIFWPWG
Trigger: CCCCCATGGCCAGAATATGACCGTCAGCGTGGTCATCTGATGCCACTTAGCCAGGCCTTGGTCAAGGAGCTCCACTTCAACTGGCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCCGGCACCACGCGGTaGCGGAGCTTCACTGACACC +
Preference number: 5 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVPGTTR*RSFTDT
Trigger: GGTGTCAGTGAAGCTCCGCAACCGCGTGGTGCCGGG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCAGGAAGTTCGTCACGTaGTGCAGCCGGCGCACCCGC +
Preference number: 5 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCRKFVT*CSRRTR
Trigger: GCGGGTGCGCCGGCTGCACAACGTGACGAACTTCCT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCAGGTCCCGCAGCAGGTaGAAGACGTGCAGCGGCAGC +
Preference number: 5 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCRSRSR*KTCSGS
Trigger: GCTGCCGCTGCACGTCTTCAACCTGCTGCGGGACCT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGGCCCTAGGAGGCCAGTaGAAGTGGAGCTCCTTGACC +
Preference number: 5 (lower is better)
Translates to: LRISTRLTSSGALGGQLKALGGQ*KWSSLT
Trigger: GGTCAAGGAGCTCCACTTCAACTGGCCTCCTAGGGC...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCAAGCGACCAACAGTTaGCGCAGCTCCTCGCGGAAG +
Preference number: 5 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVQATNS*RSSSRK
Trigger: CTTCCGCGAGGAGCTGCGCAAACTGTTGGTCGCTTG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGTCCTCTTCCCTCTCTTaGGCCTCCCCCAAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: LRISTRLTSSGALGGQLKSSSLS*ASPKQR
Trigger: TCTTTGCTTGGGGGAGGCCAAAGAGAGGGAAGAGGA...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGGCTGGGCTGGAAATGTaGCCCTATGTTGGCTTAGCT +
Preference number: 5 (lower is better)
Translates to: LRISTRLTSSGALGGQLKAGLEM*PYVGLA
Trigger: AGCTAAGCCAACATAGGGCAACATTTCCAGCCCAGC...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp GACCTGGTGACAAAGCTTGCAAAGAGGATTACAGAACCTCCCATCAGCCTTGAGACAGTGTGGAGACCTTaGTCCCAAGGCACTTGTCCT +
Preference number: 5 (lower is better)
Translates to: DLVTKLAKRITEPPISLETVWRP*SQGTCP
Trigger: AGGACAAGTGCCTTGGGACAAAGGTCTCCACACTGT...CTCAAGGCTGATGGGAGGTTCTGTAATCCTCTTTGCAAGCTTTGTCACCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCCCCTCACTGCCCAAGTaGCTTTTCCAACAGTGTGGA +
Preference number: 5 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCPSLPK*LFQQCG
Trigger: TCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGG...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGAATCAAGAACCTGCCTaGGGAAACAAAGGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LRISTRLTSSGALGGQLKNQEPA*GNKGAP
Trigger: AGGAGCACCTTTGTTTCCCAAGGCAGGTTCTTGATT...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp GCCCTCACTGCCCAAGTTGCTTTTCCAACAGTGTGGAGACCTTTGTCCCAAGGCAATAGGATTGAACCCTaGTCATTCCCATATCATCCC +
Preference number: 5 (lower is better)
Translates to: ALTAQVAFPTVWRPLSQGNRIEP*SFPYHP
Trigger: GGGATGATATGGGAATGACAAGGGTTCAATCCTATT...GCCTTGGGACAAAGGTCTCCACACTGTTGGAAAAGCAACTTGGGCAGTGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCCTTGCAACTTCTGCCGGTCCTaGATTTCTGGGTTGATCATG +
Preference number: 5 (lower is better)
Translates to: PVFTPRSSHTLEVSFVPCNFCRS*ISGLIM
Trigger: CATGATCAACCCAGAAATCAAGGACCGGCAGAAGTT...GCAAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCTGTTGGAGCATGCATaGAAACACTCTTCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVLLEHA*KHSSAS
Trigger: ACTGGCAGAAGAGTGTTTCAATGCATGCTCCAACAG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCGTGGAGAAAAAGTTTaGTTTGTCCTTCAAGGGCAT +
Preference number: 5 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVRGEKV*FVLQGH
Trigger: ATGCCCTTGAAGGACAAACAAAACTTTTTCTCCACG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCAGAAAACCAAATATTaGAGTGCCCACTTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVQKTKY*SAHFVA
Trigger: TGCCACAAAGTGGGCACTCAAATATTTGGTTTTCTG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp CTGAGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGATGAATGTAATAGGATaGAACCCTTGTCATTCCCAT +
Preference number: 5 (lower is better)
Translates to: LRISTRLTSSGALGGQLKMNVIG*NPCHSH
Trigger: ATGGGAATGACAAGGGTTCAATCCTATTACATTCAT...CTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACAGAATAAGCACCAGATaGACCTCGAGTGGTGCCCTA +
Preference number: 5 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENRISTR*TSSGAL
Trigger: TAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCT...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGCTCTTGAGGTTAGTTTaGTGCCTTGCATTTGAAAGA +
Preference number: 5 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVLLRLV*CLAFER
Trigger: TCTTTCAAATGCAAGGCACAAAACTAACCTCAAGAG...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp ACAGGCCCTGTGTTCACTCCCAGATCTAGCCACACTCTTGAGGTTAGTTTTGTGGACCTCTTAAGTGAATaGGACCTTTTCCTCTTTATT +
Preference number: 5 (lower is better)
Translates to: TGPVFTPRSSHTLEVSFVDLLSE*DLFLFI
Trigger: AATAAAGAGGAAAAGGTCCAATTCACTTAAGAGGTC...CACAAAACTAACCTCAAGAGTGTGGCTAGATCTGGGAGTGAACACAGGGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCTGCCTGTATTACTCCTaGCAGGAAGAGGACTGTGTA +
Preference number: 5 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRICLYYS*QEEDCV
Trigger: TACACAGTCCTCTTCCTGCAAGGAGTAATACAGGCA...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp AGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAAAACGATCTAGCCACACTCTaGAGGTTAGTTTTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: RDCRRMPRYTVYIEYSENDLATL*RLVLCL
Trigger: AAGGCACAAAACTAACCTCAAGAGTGTGGCTAGATC...GTTTTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp TTAAGTAAACTTCTGCCGGTCCTTGATTTCTGGGTTGATCATGTTCCAAGAATCGTTCATTTAGCACCATaGCCAGAGGTAACCTCCATA +
Preference number: 5 (lower is better)
Translates to: LSKLLPVLDFWVDHVPRIVHLAP*PEVTSI
Trigger: TATGGAGGTTACCTCTGGCAATGGTGCTAAATGAAC...GATTCTTGGAACATGATCAACCCAGAAATCAAGGACCGGCAGAAGTTTACTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS-3UTR CAA 90 bp ATTAGAGACTGCAGGAGAATGCCACGCTACACAGTTTACATTGAGTATTCAGAATCCTTGATTTCTGGGTaGATCATGTTCCAAGAATCA +
Preference number: 5 (lower is better)
Translates to: IRDCRRMPRYTVYIEYSESLISG*IMFQES
Trigger: TGATTCTTGGAACATGATCAACCCAGAAATCAAGGA...TTCTGAATACTCAATGTAAACTGTGTAGCGTGGCATTCTCCTGCAGTCTCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS CCA 72 bp CGCCGGCGCCGAGCGCGGTCCCAGTCGGCCTGGCTCTaGGTCACGCAGCCCGGCACCACGCGGTTGCGGAGC +
Preference number: 6 (lower is better)
Translates to: RRRRARSQSAWL*VTQPGTTRLRS
Trigger: GCTCCGCAACCGCGTGGTGCCGGGCTGCGTGACCCAGAGCCAGGCCGACTGGGACCGCGCTCGGCGCCGGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS GCA 72 bp CGCGCCAGCCACCGACCCGTTGCCCGCCGAGGCCTCTaGGCTCTGGTTGGCGGGAGTTGTGACCGCCGGCGG +
Preference number: 6 (lower is better)
Translates to: RASHRPVARRGL*ALVGGSCDRRR
Trigger: CCGCCGGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGCTGGCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 72 bp AAGGTGCGCCGGCGCCGAGCGCGGTCCCAGTCGGCCTaGCTCTGGGTCACGCAGCCCGGCACCACGCGGTTG +
Preference number: 6 (lower is better)
Translates to: KVRRRRARSQSA*LWVTQPGTTRL
Trigger: CAACCGCGTGGTGCCGGGCTGCGTGACCCAGAGCCAGGCCGACTGGGACCGCGCTCGGCGCCGGCGCACCTT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 72 bp GCCACCGACCCGTTGCCCGCCGAGGCCTCTGCGCTCTaGTTGGCGGGAGTTGTGACCGCCGGCGGCAGCCCA +
Preference number: 6 (lower is better)
Translates to: ATDPLPAEASAL*LAGVVTAGGSP
Trigger: TGGGCTGCCGCCGGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CAA 72 bp GTGACGGCTGGAGCGTCCGCGCCAGCCACCGACCCGTaGCCCGCCGAGGCCTCTGCGCTCTGGTTGGCGGGA +
Preference number: 6 (lower is better)
Translates to: VTAGASAPATDP*PAEASALWLAG
Trigger: TCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGCTGGCGCGGACGCTCCAGCCGTCAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CAA 90 bp TGGAAGGGCGTGACGGCTGGAGCGTCCGCGCCAGCCACCGACCCGTaGCCCGCCGAGGCCTCTGCGCTCTGGTTGGCGGGAGTTGTGACC +
Preference number: 6 (lower is better)
Translates to: WKGVTAGASAPATDP*PAEASALWLAGVVT
Trigger: GGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGCTGGCGCGGACGCTCCAGCCGTCACGCCCTTCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 72 bp CGGACAGCGCCCAGATGGCCAGCACAGCGTAGGCGCTaGGGCGCAGCGAGATGCGCCGCCTCAGCGGGTGCA +
Preference number: 6 (lower is better)
Translates to: RTAPRWPAQRRR*GAARCAASAGA
Trigger: TGCACCCGCTGAGGCGGCGCATCTCGCTGCGCCTCAGCGCCTACGCTGTGCTGGCCATCTGGGCGCTGTCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 72 bp CAGGTGGCACAGGCCGCCGCCGAACACCCAGCCGCGTaGCTCGAAGGCATAGGCCAGCGTGAGCGGCACGCA +
Preference number: 6 (lower is better)
Translates to: QVAQAAAEHPAA*LEGIGQRERHA
Trigger: TGCGTGCCGCTCACGCTGGCCTATGCCTTCGAGCCACGCGGCTGGGTGTTCGGCGGCGGCCTGTGCCACCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CAA 72 bp ACCGACCCGTTGCCCGCCGAGGCCTCTGCGCTCTGGTaGGCGGGAGTTGTGACCGCCGGCGGCAGCCCAGAA +
Preference number: 6 (lower is better)
Translates to: TDPLPAEASALW*AGVVTAGGSPE
Trigger: TTCTGGGCTGCCGCCGGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGTCGGT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CAA 90 bp GCGCCAGCCACCGACCCGTTGCCCGCCGAGGCCTCTGCGCTCTGGTaGGCGGGAGTTGTGACCGCCGGCGGCAGCCCAGAAAATAAGTCA +
Preference number: 6 (lower is better)
Translates to: APATDPLPAEASALW*AGVVTAGGSPENKS
Trigger: TGACTTATTTTCTGGGCTGCCGCCGGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGGGCAACGGGTCGGTGGCTGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 72 bp TCAGCTGATGCACCAGCTGCAGGCTCTGGAAGGGCGTaGCGGCTGGAGCGTCCGCGCCAGCCACCGACCCGT +
Preference number: 6 (lower is better)
Translates to: SADAPAAGSGRA*RLERPRQPPTR
Trigger: ACGGGTCGGTGGCTGGCGCGGACGCTCCAGCCGTCACGCCCTTCCAGAGCCTGCAGCTGGTGCATCAGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS GCA 72 bp GGCGCACCCGCGCGATCACCAGCACCAGCAGGCAGTTaGCCACCAGCCCCACGACCACCACGACGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: GAPARSPAPAGS*PPAPRPPRRCR
Trigger: TCTACAGCGTCGTGGTGGTCGTGGGGCTGGTGGGCAACTGCCTGCTGGTGCTGGTGATCGCGCGGGTGCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 72 bp CCCAGAACTCCTCGCAGAGGCGCACGTCGTGCGGCTTaGGCTCCACGTGATAGGTGTGCACGGCGGCGGGCA +
Preference number: 6 (lower is better)
Translates to: PRTPRRGARRAA*APRDRCARRRA
Trigger: TGCCCGCCGCCGTGCACACCTATCACGTGGAGCTCAAGCCGCACGACGTGCGCCTCTGCGAGGAGTTCTGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS GCA 72 bp CCTGGCTCTGGGTCACGCAGCCCGGCACCACGCGGTTaGGGAGCTTCACTGACACCCGGACGTAAGACAGGA +
Preference number: 6 (lower is better)
Translates to: PGSGSRSPAPRG*GASLTPGRKTG
Trigger: TCCTGTCTTACGTCCGGGTGTCAGTGAAGCTCCGCAACCGCGTGGTGCCGGGCTGCGTGACCCAGAGCCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 72 bp TTCTGCTGGCCCTCGGTAGTCCTCTGCCCACGTCGGTaGTCCGGTCTCGCTTCTCCGCGGGAGCTGAACGGA +
Preference number: 6 (lower is better)
Translates to: FCWPSVVLCPRR*SGLASPRELNG
Trigger: TCCGTTCAGCTCCCGCGGAGAAGCGAGACCGGATCACCGACGTGGGCAGAGGACTACCGAGGGCCAGCAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS TCA 72 bp CACGCAGCCCGGCACCACGCGGTTGCGGAGCTTCACTaGCACCCGGACGTAAGACAGGAGGATGACCAGCAG +
Preference number: 6 (lower is better)
Translates to: HAARHHAVAELH*HPDVRQEDDQQ
Trigger: CTGCTGGTCATCCTCCTGTCTTACGTCCGGGTGTCAGTGAAGCTCCGCAACCGCGTGGTGCCGGGCTGCGTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 72 bp CCGCCGGCGGCAGCCCAGAAAATAAGTCAGAAACCCTaGGGCCCCGAGTGGTCGATGAGGCCATGGCCACCT +
Preference number: 6 (lower is better)
Translates to: PPAAAQKISQKP*GPEWSMRPWPP
Trigger: AGGTGGCCATGGCCTCATCGACCACTCGGGGCCCCAGGGTTTCTGACTTATTTTCTGGGCTGCCGCCGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 72 bp CCGCCGAGGCCTCTGCGCTCTGGTTGGCGGGAGTTGTaGCCGCCGGCGGCAGCCCAGAAAATAAGTCAGAAA +
Preference number: 6 (lower is better)
Translates to: PPRPLRSGWREL*PPAAAQKISQK
Trigger: TTTCTGACTTATTTTCTGGGCTGCCGCCGGCGGTCACAACTCCCGCCAACCAGAGCGCAGAGGCCTCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS TCA 72 bp GCTCCTCGCGGAAGCTGTCGTGCAGCCAGGCGTAGATaGAGGGGTTGTAGCAGGCCGAACTCATGGCGAGCC +
Preference number: 6 (lower is better)
Translates to: APRGSCRAARRR*RGCSRPNSWRA
Trigger: GGCTCGCCATGAGTTCGGCCTGCTACAACCCCTTCATCTACGCCTGGCTGCACGACAGCTTCCGCGAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CAA 90 bp GGCCATGGCCACCTGTTCAAAGGTAATCAAAGTCCGTCACTTCCCTaGCCATACTCCATCCGACCTCCTACACCAGCCGCGCCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: GHGHLFKGNQSPSLP*PYSIRPPTPAAPLP
Trigger: GGGGAGGGGCGCGGCTGGTGTAGGAGGTCGGATGGAGTATGGCAAGGGAAGTGACGGACTTTGATTACCTTTGAACAGGTGGCCATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636925.1
CDS CCA 72 bp CATCAGATGACCACGCTGACGGTCATATTCTGGCCATaGGGGGCTATCTTGCGGGGCCAAGCGACCAACAGT +
Preference number: 6 (lower is better)
Translates to: HQMTTLTVIFWP*GAILRGQATNS
Trigger: ACTGTTGGTCGCTTGGCCCCGCAAGATAGCCCCCCATGGCCAGAATATGACCGTCAGCGTGGTCATCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000239032.4
ENST00000636925.1
CDS CCA 72 bp TTGACCTCGAGTGGTGCCCTAGGAGGCCAGTTGAAGTaGAGCTCCTTGACCAAGGCCTGGCTAAGTGGCATC +
Preference number: 6 (lower is better)
Translates to: LTSSGALGGQLK*SSLTKAWLSGI
Trigger: GATGCCACTTAGCCAGGCCTTGGTCAAGGAGCTCCACTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS CAA 90 bp AGAATAAGCACCAGATTGACCTCGAGTGGTGCCCTAGGAGGCCAGTaGAAGTGGAGCTCCTTGACCAAGGCCTGGCTAAGTGGCATCAGA +
Preference number: 6 (lower is better)
Translates to: RISTRLTSSGALGGQ*KWSSLTKAWLSGIR
Trigger: TCTGATGCCACTTAGCCAGGCCTTGGTCAAGGAGCTCCACTTCAACTGGCCTCCTAGGGCACCACTCGAGGTCAATCTGGTGCTTATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS GCA 72 bp ACCTGTTCAAAGGTAATCAAAGTCCGTCACTTCCCTTaGCATACTCCATCCGACCTCCTACACCAGCCGCGC +
Preference number: 6 (lower is better)
Translates to: TCSKVIKVRHFP*HTPSDLLHQPR
Trigger: GCGCGGCTGGTGTAGGAGGTCGGATGGAGTATGGCAAGGGAAGTGACGGACTTTGATTACCTTTGAACAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636925.1
CDS CCA 72 bp GTTGAAGTGGAGCTCCTTGACCAAGGCCTGGCTAAGTaGCATCAGATGACCACGCTGACGGTCATATTCTGG +
Preference number: 6 (lower is better)
Translates to: VEVELLDQGLAK*HQMTTLTVIFW
Trigger: CCAGAATATGACCGTCAGCGTGGTCATCTGATGCCACTTAGCCAGGCCTTGGTCAAGGAGCTCCACTTCAAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000239032.4
CDS CAA 72 bp CACCTGTTCAAAGGTAATCAAAGTCCGTCACTTCCCTaGCCATACTCCATCCGACCTCCTACACCAGCCGCG +
Preference number: 6 (lower is better)
Translates to: HLFKGNQSPSLP*PYSIRPPTPAA
Trigger: CGCGGCTGGTGTAGGAGGTCGGATGGAGTATGGCAAGGGAAGTGACGGACTTTGATTACCTTTGAACAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000636925.1