Pregenerated sensors for PRKRA (Homo sapiens)
Ensembl gene IDs: ENSG00000180228Ensembl transcript IDs: ENST00000424699.5, ENST00000432031.6, ENST00000457633.2, ENST00000460433.5, ENST00000463882.1, ENST00000470200.5, ENST00000474793.6, ENST00000487082.5, ENST00000490501.5, ENST00000676505.1, ENST00000676586.1, ENST00000676752.1, ENST00000676832.1, ENST00000677136.1, ENST00000677206.1, ENST00000677253.1, ENST00000677386.1, ENST00000677460.1, ENST00000677584.1, ENST00000677806.1, ENST00000677859.1, ENST00000678379.1, ENST00000678813.1, ENST00000679202.1
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTaGGAAAGTCTCTGTATTAAGTCAGGCCACTTTAGGCCTGATTAC | + |
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Preference number: 1 (lower is better) Translates to: RMLHAEATQIIVMEK*ESLCIKSGHFRPDY Trigger: GTAATCAGGCCTAAAGTGGCCTGACTTAATACAGAGACTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| 3UTR-3UTR GCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGGCAAAGAATGCTGCATaGCGAAGCTACCCAAATAAT | + |
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Preference number: 2 (lower is better) Translates to: RGQELQRMLHAEATQIIVAKNAA*RSYPNN Trigger: ATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGC...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| 3UTR-3UTR TCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATTGTGATGGAGAAGTaGGAAAGTCTCTGTATTAAG | + |
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Preference number: 2 (lower is better) Translates to: RGQELQRMLHAEATQIIVIVMEK*ESLCIK Trigger: CTTAATACAGAGACTTTCTCACTTCTCCATCACAAT...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| 3UTR-3UTR TCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGATTGTGATGGAGAAGTaGGAAAGTCTCTGTATTAAG | + |
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Preference number: 2 (lower is better) Translates to: KNAACRSYPNNCDGEVRKIVMEK*ESLCIK Trigger: CTTAATACAGAGACTTTCTCACTTCTCCATCACAAT...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| 3UTR TCA 72 bp | CATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTaGGAAAGTCTCTGTATTAAGTCAGGCCACTTTAGG | + |
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Preference number: 3 (lower is better) Translates to: HAEATQIIVMEK*ESLCIKSGHFR Trigger: CCTAAAGTGGCCTGACTTAATACAGAGACTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR TCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGAACCGCCACCGACGGTaGCGAGGGAGGCGCCGAGTT | + |
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Preference number: 4 (lower is better) Translates to: RGQELQRMLHAEATQIIVNRHRR*RGRRRV Trigger: AACTCGGCGCCTCCCTCGTCACCGTCGGTGGCGGTT...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGGGCCAGGGCCAGAGCTaGCGAGGCTGGGGCGCACCT | + |
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Preference number: 4 (lower is better) Translates to: KNAACRSYPNNCDGEVRKGQGQS*RGWGAP Trigger: AGGTGCGCCCCAGCCTCGCCAGCTCTGGCCCTGGCC...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR GCA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGGTCTTCCGGCCCCGCTaGGGCAGTCACTCCGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TAKNAACRSYPNNCDGEVVFRPR*GSHSAG Trigger: TCCTGCGGAGTGACTGCCGCAGCGGGGCCGGAAGAC...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGCAGAGCTGGCGAGGCTaGGGCGCACCTGTCTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: KNAACRSYPNNCDGEVRKQSWRG*GAPVFR Trigger: CCGGAAGACAGGTGCGCCCCAGCCTCGCCAGCTCTG...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR TCA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGCTCTCAGGGAAAACCTaGCGATCCCTTCCCGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TAKNAACRSYPNNCDGEVLSGKT*RSLPGR Trigger: GCGCCCGGGAAGGGATCGTCAGGTTTTCCCTGAGAG...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR TCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGTCATCTTCCCCAAACTaGAGGTCCCACTGTCCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGQELQRMLHAEATQIIVSSSPN*RSHCPR Trigger: GCGAGGACAGTGGGACCTTCAGTTTGGGGAAGATGA...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR TCA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGCAGGAGCAGGCGGGGTaGGCGAGGTCTTTAGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: TAKNAACRSYPNNCDGEVQEQAG*ARSLER Trigger: TCTCTCTAAAGACCTCGCTCACCCCGCCTGCTCCTG...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR CCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGTCAACAGAACAGGGCTaGCAGCAGCGCCGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: KNAACRSYPNNCDGEVRKSTEQG*QQRRSL Trigger: GAGGCTGCGGCGCTGCTGCCAGCCCTGTTCTGTTGA...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR TCA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGTCATCTTCCCCAAACTaGAGGTCCCACTGTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: TAKNAACRSYPNNCDGEVSSSPN*RSHCPR Trigger: GCGAGGACAGTGGGACCTTCAGTTTGGGGAAGATGA...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR TCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGTGCCAAATTGGAGATTaGAGCAGAAGCGTAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGQELQRMLHAEATQIIVCQIGD*SRSVEA Trigger: GGCCTCTACGCTTCTGCTTCAATCTCCAATTTGGCA...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR GCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGAGGAACTGCAAAGAATaGTGCATGCCGAAGCTACCC | + |
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Preference number: 4 (lower is better) Translates to: RGQELQRMLHAEATQIIVRNCKE*CMPKLP Trigger: GGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCT...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGTCATCTTCCCCAAACTaGAGGTCCCACTGTCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: KNAACRSYPNNCDGEVRKSSSPN*RSHCPR Trigger: GCGAGGACAGTGGGACCTTCAGTTTGGGGAAGATGA...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR GCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGTTGTACCTTCACCTGTaGAGGTTATGTCACCAACGG | + |
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Preference number: 4 (lower is better) Translates to: RGQELQRMLHAEATQIIVLYLHL*RLCHQR Trigger: CCGTTGGTGACATAACCTGCACAGGTGAAGGTACAA...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000424699.5 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR GCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGAACTGCAAAGAATGCTaGATGCCGAAGCTACCCAAA | + |
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Preference number: 4 (lower is better) Translates to: RGQELQRMLHAEATQIIVNCKEC*MPKLPK Trigger: TTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTT...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR TCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGACTTGTACCTTCACCTaGATCGGTGTTTTCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KNAACRSYPNNCDGEVRKTCTFT*IGVFPG Trigger: GCCAGGGAAAACACCGATTCAGGTGAAGGTACAAGT...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676832.1 |
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| CDS-3UTR GCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGAGGAACTGCAAAGAATaGTGCATGCCGAAGCTACCC | + |
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Preference number: 4 (lower is better) Translates to: KNAACRSYPNNCDGEVRKRNCKE*CMPKLP Trigger: GGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCT...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR GCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGTTGTACCTTCACCTGTaGAGGTTATGTCACCAACGG | + |
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Preference number: 4 (lower is better) Translates to: KNAACRSYPNNCDGEVRKLYLHL*RLCHQR Trigger: CCGTTGGTGACATAACCTGCACAGGTGAAGGTACAA...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000424699.5 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR GCA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAACTGCAAAGAATGCTaGATGCCGAAGCTACCCAAA | + |
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Preference number: 4 (lower is better) Translates to: TAKNAACRSYPNNCDGEVNCKEC*MPKLPK Trigger: TTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTT...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR GCA 90 bp | AGGGGTCAGGAACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGAACCACAAAAAGGTGTaGTTTGCATGCCAAATTGGA | + |
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Preference number: 4 (lower is better) Translates to: RGQELQRMLHAEATQIIVNHKKV*FACQIG Trigger: TCCAATTTGGCATGCAAAGCACACCTTTTTGTGGTT...CACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTTCCTGACCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR GCA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGGCAAAGAATGCTGCATaGCGAAGCTACCCAAATAAT | + |
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Preference number: 4 (lower is better) Translates to: TAKNAACRSYPNNCDGEVAKNAA*RSYPNN Trigger: ATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGC...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR GCA 90 bp | AAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGAGAAAGAACTGCAAAGAATGCTaGATGCCGAAGCTACCCAAA | + |
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Preference number: 4 (lower is better) Translates to: KNAACRSYPNNCDGEVRKNCKEC*MPKLPK Trigger: TTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGTT...CTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR CCA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGCTTTGCATGCCAAATTaGAGATTGAAGCAGAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: TAKNAACRSYPNNCDGEVLCMPN*RLKQKR Trigger: ACGCTTCTGCTTCAATCTCCAATTTGGCATGCAAAG...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS-3UTR TCA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGATTGTGATGGAGAAGTaGGAAAGTCTCTGTATTAAG | + |
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Preference number: 4 (lower is better) Translates to: TAKNAACRSYPNNCDGEVIVMEK*ESLCIK Trigger: CTTAATACAGAGACTTTCTCACTTCTCCATCACAAT...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000424699.5 ENST00000676832.1 ENST00000677206.1 ENST00000677253.1 ENST00000677584.1 |
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| CDS-3UTR GCA 90 bp | CTGTGTATGGTTATGTCAAAGAAAAATACAAGGTTGCATACGCTTAGAGAAAGTTTGTACCTTCACCTGTaGAGGTTATGTCACCAACGG | + |
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Preference number: 4 (lower is better) Translates to: LCMVMSKKNTRLHTLRESLYLHL*RLCHQR Trigger: CCGTTGGTGACATAACCTGCACAGGTGAAGGTACAA...ACTTTCTCTAAGCGTATGCAACCTTGTATTTTTCTTTGACATAACCATACACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677859.1 |
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| 3UTR CAA 72 bp | CACCTGTGTATGGTTATGTCAAAGAAAAATACAAGGTaGCATACGCTTAGAGAAAGTAAGGAAGTAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: HLCMVMSKKNTR*HTLRESKEVTH Trigger: ATGGGTTACTTCCTTACTTTCTCTAAGCGTATGCAACCTTGTATTTTTCTTTGACATAACCATACACAGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000677859.1 |
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| CDS CCA 90 bp | TCGCCGCCGAGAGGGCGGGGCCGAGCACCCACAGCCGCGGAGGCGTaGGCGCCGGGCACGGCTTTACCCAGAATGCCTCTGGAGGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: SPPRGRGRAPTAAEA*APGTALPRMPLEGR Trigger: CCGGCCCTCCAGAGGCATTCTGGGTAAAGCCGTGCCCGGCGCCCACGCCTCCGCGGCTGTGGGTGCTCGGCCCCGCCCTCTCGGCGGCGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457633.2 |
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| CDS CCA 90 bp | GGAGGCGCCGAGTTCCCCGGAGGCCAGGGCCAGAGCTGGCGAGGCTaGGGCGCACCTGTCTTCCGGCCCCGCTGCGGCAGTCACTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: GGAEFPGGQGQSWRG*GAPVFRPRCGSHSA Trigger: TGCGGAGTGACTGCCGCAGCGGGGCCGGAAGACAGGTGCGCCCCAGCCTCGCCAGCTCTGGCCCTGGCCTCCGGGGAACTCGGCGCCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000432031.6 ENST00000457633.2 ENST00000676505.1 ENST00000677206.1 |
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| CDS TCA 90 bp | ACAGAACAGGGCTGGCAGCAGCGCCGCAGCCTCTCAGGGAAAACCTaGCGATCCCTTCCCGGGCGCGCCGACCGAGCGTCACCTCCGCCC | + |
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Preference number: 5 (lower is better) Translates to: TEQGWQQRRSLSGKT*RSLPGRADRASPPP Trigger: GGGCGGAGGTGACGCTCGGTCGGCGCGCCCGGGAAGGGATCGTCAGGTTTTCCCTGAGAGGCTGCGGCGCTGCTGCCAGCCCTGTTCTGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000432031.6 ENST00000457633.2 ENST00000487082.5 ENST00000677206.1 |
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| CDS GCA 90 bp | GTGGCGTGGATCTCTGCTCACTGCAAGCTCCGCCTCCCGGGTTCATaGCATTCTCCTGACTCAGCCTCCGGAGTAGCGGGGACTACAGGC | + |
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Preference number: 5 (lower is better) Translates to: VAWISAHCKLRLPGS*HSPDSASGVAGTTG Trigger: GCCTGTAGTCCCCGCTACTCCGGAGGCTGAGTCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAGTGAGCAGAGATCCACGCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676752.1 |
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| CDS TCA 90 bp | TCCGCAGGAGCAGGCGGGGTGAGCGAGGTCTTTAGAGAGAGCACTTaGATGCGGGTAGGAGAGATTCTCAACAGAACAGGGCTGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: SAGAGGVSEVFREST*MRVGEILNRTGLAA Trigger: TGCTGCCAGCCCTGTTCTGTTGAGAATCTCTCCTACCCGCATTCAAGTGCTCTCTCTAAAGACCTCGCTCACCCCGCCTGCTCCTGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000432031.6 ENST00000457633.2 ENST00000460433.5 ENST00000487082.5 ENST00000676505.1 ENST00000677206.1 |
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| CDS GCA 90 bp | TGCCTGGCCTTGTTTTTCTTTGAGGCAGGGTTTCACAGGCTGGAGTaGAGGGGCACAATCTTAGCTTACTGCAATCTCCGCCTCCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: CLALFFFEAGFHRLE*RGTILAYCNLRLPG Trigger: ACCCGGGAGGCGGAGATTGCAGTAAGCTAAGATTGTGCCCCTGCACTCCAGCCTGTGAAACCCTGCCTCAAAGAAAAACAAGGCCAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS TCA 90 bp | GCCTGTTCCTCACAGCTGTCTGGCAAAAAGAGAACTTTTCCGAACTaGAAAGCAACACCAAGTATTGACTGCCAACCCACTCGGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: ACSSQLSGKKRTFPN*KATPSIDCQPTRSS Trigger: GGATGACCGAGTGGGTTGGCAGTCAATACTTGGTGTTGCTTTTCAGTTCGGAAAAGTTCTCTTTTTGCCAGACAGCTGTGAGGAACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000463882.1 |
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| CDS CCA 90 bp | TGGTATCAGACATCAACTAGAAAAACAGGCTACTACCGCCCTCTTTaGCAACACCAGAGGAGACCATCTACAGGTTTCACTGCCATCAGT | + |
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Preference number: 5 (lower is better) Translates to: WYQTSTRKTGYYRPL*QHQRRPSTGFTAIS Trigger: ACTGATGGCAGTGAAACCTGTAGATGGTCTCCTCTGGTGTTGCCAAAGAGGGCGGTAGTAGCCTGTTTTTCTAGTTGATGTCTGATACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000490501.5 ENST00000677136.1 |
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| CDS CCA 90 bp | GGACGGAAGCTGAGGTTCCTGCTTTTGGCCTGGTGCTTTCTGTACTaGCCACACTACCTCCCAAAGGCAAATAGTTTCTTATTACTTGAA | + |
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Preference number: 5 (lower is better) Translates to: GRKLRFLLLAWCFLY*PHYLPKANSFLLLE Trigger: TTCAAGTAATAAGAAACTATTTGCCTTTGGGAGGTAGTGTGGCCAGTACAGAAAGCACCAGGCCAAAAGCAGGAACCTCAGCTTCCGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677806.1 |
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| CDS TCA 90 bp | CAGATCGTACTTCAGGCATATGTAAGTGTATGCACAAGAAGAACTTaGAAGCATGCCAAGCTCCAGAGTGCACCCAGTGGACACTACTTT | + |
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Preference number: 5 (lower is better) Translates to: QIVLQAYVSVCTRRT*KHAKLQSAPSGHYF Trigger: AAAGTAGTGTCCACTGGGTGCACTCTGGAGCTTGGCATGCTTTCAAGTTCTTCTTGTGCATACACTTACATATGCCTGAAGTACGATCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS CCA 90 bp | AACAAATCACTTAGGGCTCCTAGACTGCATACGATGTTTCACTCCTaGCCTTTGCACACGCTTTTTCTTCTCTCTGGAATTCTTTTCCCC | + |
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Preference number: 5 (lower is better) Translates to: NKSLRAPRLHTMFHS*PLHTLFLLSGILFP Trigger: GGGGAAAAGAATTCCAGAGAGAAGAAAAAGCGTGTGCAAAGGCCAGGAGTGAAACATCGTATGCAGTCTAGGAGCCCTAAGTGATTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS-3UTR CAA 90 bp | ACTGCAAAGAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTGATGCCAAATTGGAGATaGAAGCAGAAGCGTAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: TAKNAACRSYPNNCDGEVMPNWR*KQKRRG Trigger: GCCTCTACGCTTCTGCTTCAATCTCCAATTTGGCAT...CACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTCTTTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677206.1 |
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| CDS TCA 90 bp | GAAGCAGTTTTGTGCTACGAATGGTGTTCTTGCATTAAACCACAGTaGGCTGGTATCAGACATCAACTAGAAAAACAGGCTACTACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAVLCYEWCSCIKPQ*AGIRHQLEKQATTA Trigger: GGCGGTAGTAGCCTGTTTTTCTAGTTGATGTCTGATACCAGCTCACTGTGGTTTAATGCAAGAACACCATTCGTAGCACAAAACTGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000490501.5 ENST00000677136.1 |
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| CDS GCA 90 bp | CAACACTATGTTCTACACACAACAAATCACTTAGGGCTCCTAGACTaGATACGATGTTTCACTCCTGGCCTTTGCACACGCTTTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QHYVLHTTNHLGLLD*IRCFTPGLCTRFFF Trigger: GAAGAAAAAGCGTGTGCAAAGGCCAGGAGTGAAACATCGTATGCAGTCTAGGAGCCCTAAGTGATTTGTTGTGTGTAGAACATAGTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS TCA 90 bp | ACAATGCTGCATGCCGAAGCTACCCAAATAATTGTGATGGAGAAGTaGGAAAGTCTCTGTATTAAGTCAGGCCACTTTAGGCCTGATTAC | + |
|
Preference number: 5 (lower is better) Translates to: TMLHAEATQIIVMEK*ESLCIKSGHFRPDY Trigger: GTAATCAGGCCTAAAGTGGCCTGACTTAATACAGAGACTTTCTCACTTCTCCATCACAATTATTTGGGTAGCTTCGGCATGCAGCATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS TCA 90 bp | CATGCCAAGCTCCAGAGTGCACCCAGTGGACACTACTTTAATATGTaGGATGCTCCAGGACCAATATTCTATCTAGAAACACCTAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: HAKLQSAPSGHYFNM*DAPGPIFYLETPKV Trigger: TACTTTAGGTGTTTCTAGATAGAATATTGGTCCTGGAGCATCTCACATATTAAAGTAGTGTCCACTGGGTGCACTCTGGAGCTTGGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS TCA 90 bp | CTTCTACATGGAATGCCCTTTTCTCAGACCTCTTCTATGGGAATCTaGTCGGTCATCCAAGATATATCTCAAATGTCACTTCCTCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLHGMPFSQTSSMGI*SVIQDISQMSLPPR Trigger: TCTTGGAGGAAGTGACATTTGAGATATATCTTGGATGACCGATCAGATTCCCATAGAAGAGGTCTGAGAAAAGGGCATTCCATGTAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS TCA 90 bp | AGATCAATTATAATGCATGACCCTAGAGAATCAAGCATCATCTTGTaGAATGCAAGGCTTGTCTTGGGCAGCTGCTTATCTAGAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RSIIMHDPRESSIIL*NARLVLGSCLSRGL Trigger: CAACCCTCTAGATAAGCAGCTGCCCAAGACAAGCCTTGCATTTCACAAGATGATGCTTGATTCTCTAGGGTCATGCATTATAATTGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS TCA 90 bp | GTTTCTACATCATTATTGAATAATCCATCCTCTCACCCACTGATCTaGAATCTCACTGTTGCTATATACTATGGTCCTATGTGGATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSTSLLNNPSSHPLI*NLTVAIYYGPMWIS Trigger: GCTAATCCACATAGGACCATAGTATATAGCAACAGTGAGATTTCAGATCAGTGGGTGAGAGGATGGATTATTCAATAATGATGTAGAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676752.1 |
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| CDS GCA 90 bp | CACAGAACTATGAAGAGAGATCTGTTTGATCTATCATCTGCTCAGTaGTGGGATAATCCTCTAAGATTTACATGTATCCTGCAGAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: HRTMKRDLFDLSSAQ*WDNPLRFTCILQKI Trigger: TATTTTCTGCAGGATACATGTAAATCTTAGAGGATTATCCCAGCACTGAGCAGATGATAGATCAAACAGATCTCTCTTCATAGTTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS CCA 90 bp | AGAACTATGAAGAGAGATCTGTTTGATCTATCATCTGCTCAGTGCTaGGATAATCCTCTAAGATTTACATGTATCCTGCAGAAAATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: RTMKRDLFDLSSAQC*DNPLRFTCILQKID Trigger: ATCTATTTTCTGCAGGATACATGTAAATCTTAGAGGATTATCCCAGCACTGAGCAGATGATAGATCAAACAGATCTCTCTTCATAGTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS GCA 72 bp | CGGAGGCGTGGGCGCCGGGCACGGCTTTACCCAGAATaGCTCTGGAGGGCCGGCTCCCCGCGCCCCGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRGRRARLYPE*LWRAGSPRPGP Trigger: AGGGCCGGGGCGCGGGGAGCCGGCCCTCCAGAGGCATTCTGGGTAAAGCCGTGCCCGGCGCCCACGCCTCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457633.2 |
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| CDS GCA 72 bp | AGCCTTGGTGCCGTAGCTCCGGCTACGCCCCCTCGCTaGTCCTCTGCGGGCCTCCGTCCCGGCCCAACTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SLGAVAPATPPR*SSAGLRPGPTP Trigger: CGGAGTTGGGCCGGGACGGAGGCCCGCAGAGGAGCAGCGAGGGGGCGTAGCCGGAGCTACGGCACCAAGGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000677386.1 ENST00000677460.1 ENST00000677806.1 ENST00000678813.1 |
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| CDS CCA 72 bp | AGAGGGCGGGGCCGAGCACCCACAGCCGCGGAGGCGTaGGCGCCGGGCACGGCTTTACCCAGAATGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGRGRAPTAAEA*APGTALPRMPL Trigger: CAGAGGCATTCTGGGTAAAGCCGTGCCCGGCGCCCACGCCTCCGCGGCTGTGGGTGCTCGGCCCCGCCCTCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457633.2 |
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| CDS TCA 72 bp | GGCTGGCAGCAGCGCCGCAGCCTCTCAGGGAAAACCTaGCGATCCCTTCCCGGGCGCGCCGACCGAGCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GWQQRRSLSGKT*RSLPGRADRAS Trigger: TGACGCTCGGTCGGCGCGCCCGGGAAGGGATCGTCAGGTTTTCCCTGAGAGGCTGCGGCGCTGCTGCCAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000432031.6 ENST00000457633.2 ENST00000487082.5 ENST00000677206.1 |
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| CDS TCA 72 bp | AGAAGCGTAGAGGCCAGTTTTAACCGCCACCGACGGTaGCGAGGGAGGCGCCGAGTTCCCCGGAGGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSVEASFNRHRR*RGRRRVPRRPG Trigger: CCCTGGCCTCCGGGGAACTCGGCGCCTCCCTCGTCACCGTCGGTGGCGGTTAAAACTGGCCTCTACGCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000432031.6 ENST00000457633.2 ENST00000676505.1 ENST00000677206.1 |
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| CDS TCA 72 bp | CCCGCTGCGGCAGTCACTCCGCAGGAGCAGGCGGGGTaGGCGAGGTCTTTAGAGAGAGCACTTGAATGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAAAVTPQEQAG*ARSLERALECG Trigger: CCCGCATTCAAGTGCTCTCTCTAAAGACCTCGCTCACCCCGCCTGCTCCTGCGGAGTGACTGCCGCAGCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000432031.6 ENST00000457633.2 ENST00000460433.5 ENST00000487082.5 ENST00000676505.1 ENST00000677206.1 |
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| CDS TCA 72 bp | CTGCAAGCTCCGCCTCCCGGGTTCATGCCATTCTCCTaGCTCAGCCTCCGGAGTAGCGGGGACTACAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LQAPPPGFMPFS*LSLRSSGDYRR Trigger: GCGCCTGTAGTCCCCGCTACTCCGGAGGCTGAGTCAGGAGAATGGCATGAACCCGGGAGGCGGAGCTTGCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000676752.1 |
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| CDS CCA 72 bp | GGGCCTCGGCGCGGTGCCTGCTCAGCCTGTAGTAACTaGCCCCTAGGCCGCAGTTCTTTGTCCTTAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPRRGACSACSN*PLGRSSLSLAG Trigger: TCCTGCTAAGGACAAAGAACTGCGGCCTAGGGGCCAGTTACTACAGGCTGAGCAGGCACCGCGCCGAGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470200.5 |
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| CDS CCA 72 bp | ATGGCGCGATCCCAGCTCACTGCAACCACTGCCTACTaGGTCCAAGGAATTCTCGTGTCTCAGCCTCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: MARSQLTATTAY*VQGILVSQPPK Trigger: CTTGGGAGGCTGAGACACGAGAATTCCTTGGACCCAGTAGGCAGTGGTTGCAGTGAGCTGGGATCGCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000474793.6 ENST00000676586.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS CAA 72 bp | TCAGCCTGTAGTAACTGGCCCCTAGGCCGCAGTTCTTaGTCCTTAGCAGGAGGCCGTTTCTTGCCGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SACSNWPLGRSS*SLAGGRFLPGE Trigger: CTCTCCCGGCAAGAAACGGCCTCCTGCTAAGGACAAAGAACTGCGGCCTAGGGGCCAGTTACTACAGGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000470200.5 |
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| CDS GCA 72 bp | CAAGGACGGAAGCTGAGGTTCCTGCTTTTGGCCTGGTaGTTTCTGTACTGGCCACACTACCTCCCAAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QGRKLRFLLLAW*FLYWPHYLPKA Trigger: TGCCTTTGGGAGGTAGTGTGGCCAGTACAGAAAGCACCAGGCCAAAAGCAGGAACCTCAGCTTCCGTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677806.1 |
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| CDS CAA 72 bp | GGACTGCATCAAGGACGGAAGCTGAGGTTCCTGCTTTaGGCCTGGTGCTTTCTGTACTGGCCACACTACCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLHQGRKLRFLL*AWCFLYWPHYL Trigger: GAGGTAGTGTGGCCAGTACAGAAAGCACCAGGCCAAAAGCAGGAACCTCAGCTTCCGTCCTTGATGCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677806.1 |
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| CDS CAA 90 bp | GCGAATCAAGGACTGCATCAAGGACGGAAGCTGAGGTTCCTGCTTTaGGCCTGGTGCTTTCTGTACTGGCCACACTACCTCCCAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: ANQGLHQGRKLRFLL*AWCFLYWPHYLPKA Trigger: TGCCTTTGGGAGGTAGTGTGGCCAGTACAGAAAGCACCAGGCCAAAAGCAGGAACCTCAGCTTCCGTCCTTGATGCAGTCCTTGATTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000677806.1 |
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| CDS CCA 72 bp | TGGTTGGGTTCACCTTCAGGCTATACAGAAACAGCATaGCCATCACCAGTGGGGGAGAACCCAATACCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: WLGSPSGYTETA*PSPVGENPIPA Trigger: GGCAGGTATTGGGTTCTCCCCCACTGGTGATGGCCATGCTGTTTCTGTATAGCCTGAAGGTGAACCCAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000474793.6 ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS TCA 72 bp | ACTTCGCGAATCAAGGACTGCATCAAGGACGGAAGCTaGGGTTCCTGCTTTTGGCCTGGTGCTTTCTGTACT | + |
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Preference number: 6 (lower is better) Translates to: TSRIKDCIKDGS*GSCFWPGAFCT Trigger: AGTACAGAAAGCACCAGGCCAAAAGCAGGAACCTCAGCTTCCGTCCTTGATGCAGTCCTTGATTCGCGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677806.1 |
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| CDS CCA 72 bp | CTGAGGTTCCTGCTTTTGGCCTGGTGCTTTCTGTACTaGCCACACTACCTCCCAAAGGCAAATAGTTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LRFLLLAWCFLY*PHYLPKANSFL Trigger: TAAGAAACTATTTGCCTTTGGGAGGTAGTGTGGCCAGTACAGAAAGCACCAGGCCAAAAGCAGGAACCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000677806.1 |
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| CDS CAA 90 bp | TGCATGACCCTAGAGAATCAAGCATCATCTTGTGAAATGCAAGGCTaGTCTTGGGCAGCTGCTTATCTAGAGGGTTGCCATGTCACTGGT | + |
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Preference number: 6 (lower is better) Translates to: CMTLENQASSCEMQG*SWAAAYLEGCHVTG Trigger: ACCAGTGACATGGCAACCCTCTAGATAAGCAGCTGCCCAAGACAAGCCTTGCATTTCACAAGATGATGCTTGATTCTCTAGGGTCATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS TCA 72 bp | CACAAAAAGGTGTGCTTTGCATGCCAAATTGGAGATTaGAGCAGAAGCGTAGAGGCCAGTTTTAACCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HKKVCFACQIGD*SRSVEASFNRH Trigger: GTGGCGGTTAAAACTGGCCTCTACGCTTCTGCTTCAATCTCCAATTTGGCATGCAAAGCACACCTTTTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000432031.6 ENST00000457633.2 ENST00000676505.1 ENST00000677206.1 |
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| CDS GCA 72 bp | GAATTTGACTGTGTCTCCCAAGCTCTCTTACCTAATTaGCTCTGTGATCCTGACTCACAAACAGGAAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EFDCVSQALLPN*LCDPDSQTGSS Trigger: GCTGCTTCCTGTTTGTGAGTCAGGATCACAGAGGCAATTAGGTAAGAGAGCTTGGGAGACACAGTCAAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS GCA 72 bp | CTTTCAGTAGTCTATAAACTCCTTAGAGGCAGGGACTaGTTATTCACTGCACCCCAGTACCCAACACAACAC | + |
|
Preference number: 6 (lower is better) Translates to: LSVVYKLLRGRD*LFTAPQYPTQH Trigger: GTGTTGTGTTGGGTACTGGGGTGCAGTGAATAAGCAGTCCCTGCCTCTAAGGAGTTTATAGACTACTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS CCA 72 bp | ACATCAACTAGAAAAACAGGCTACTACCGCCCTCTTTaGCAACACCAGAGGAGACCATCTACAGGTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: TSTRKTGYYRPL*QHQRRPSTGFT Trigger: AGTGAAACCTGTAGATGGTCTCCTCTGGTGTTGCCAAAGAGGGCGGTAGTAGCCTGTTTTTCTAGTTGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000490501.5 ENST00000677136.1 |
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| CDS CAA 90 bp | ACAGATCGTACTTCAGGCATATGTAAGTGTATGCACAAGAAGAACTaGAAAGCATGCCAAGCTCCAGAGTGCACCCAGTGGACACTACTT | + |
|
Preference number: 6 (lower is better) Translates to: TDRTSGICKCMHKKN*KACQAPECTQWTLL Trigger: AAGTAGTGTCCACTGGGTGCACTCTGGAGCTTGGCATGCTTTCAAGTTCTTCTTGTGCATACACTTACATATGCCTGAAGTACGATCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS TCA 72 bp | GAGAACTTTTCCGAACTGAAAAGCAACACCAAGTATTaGCTGCCAACCCACTCGGTCATCCAGGTTAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: ENFSELKSNTKY*LPTHSVIQVNC Trigger: ACAGTTAACCTGGATGACCGAGTGGGTTGGCAGTCAATACTTGGTGTTGCTTTTCAGTTCGGAAAAGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000463882.1 |
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| CDS CAA 72 bp | GCTCCTAGACTGCATACGATGTTTCACTCCTGGCCTTaGCACACGCTTTTTCTTCTCTCTGGAATTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: APRLHTMFHSWP*HTLFLLSGILF Trigger: GAAAAGAATTCCAGAGAGAAGAAAAAGCGTGTGCAAAGGCCAGGAGTGAAACATCGTATGCAGTCTAGGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS CAA 72 bp | CTAGAGAATCAAGCATCATCTTGTGAAATGCAAGGCTaGTCTTGGGCAGCTGCTTATCTAGAGGGTTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LENQASSCEMQG*SWAAAYLEGCH Trigger: ATGGCAACCCTCTAGATAAGCAGCTGCCCAAGACAAGCCTTGCATTTCACAAGATGATGCTTGATTCTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS TCA 72 bp | TCACAGCTGTCTGGCAAAAAGAGAACTTTTCCGAACTaGAAAGCAACACCAAGTATTGACTGCCAACCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SQLSGKKRTFPN*KATPSIDCQPT Trigger: AGTGGGTTGGCAGTCAATACTTGGTGTTGCTTTTCAGTTCGGAAAAGTTCTCTTTTTGCCAGACAGCTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000463882.1 |
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| CDS GCA 72 bp | GAACACATGAGGAGTAGGGACAGCAAACAACAGACTTaGATAAAGTGGGGGACAGAAGGTGAAGAAAACTAT | + |
|
Preference number: 6 (lower is better) Translates to: EHMRSRDSKQQT*IKWGTEGEENY Trigger: ATAGTTTTCTTCACCTTCTGTCCCCCACTTTATGCAAGTCTGTTGTTTGCTGTCCCTACTCCTCATGTGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000490501.5 ENST00000677136.1 |
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| CDS CCA 72 bp | CTTCTTCCTGGAATCTGTCTCCAAACCTGTTTTTGTTaGATGCCTTCTTCTATGTTCCCACATCACACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLPGICLQTCFC*MPSSMFPHHTL Trigger: CAGAGTGTGATGTGGGAACATAGAAGAAGGCATCCAACAAAAACAGGTTTGGAGACAGATTCCAGGAAGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS CAA 90 bp | CACTACTGGCCTATCATCTTTAGATCCCGTCCTATTATTCTGAATTaGACTGTGTCTCCCAAGCTCTCTTACCTAATTGCCTCTGTGATC | + |
|
Preference number: 6 (lower is better) Translates to: HYWPIIFRSRPIILN*TVSPKLSYLIASVI Trigger: GATCACAGAGGCAATTAGGTAAGAGAGCTTGGGAGACACAGTCAAATTCAGAATAATAGGACGGGATCTAAAGATGATAGGCCAGTAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS TCA 72 bp | CTCCAGAGTGCACCCAGTGGACACTACTTTAATATGTaGGATGCTCCAGGACCAATATTCTATCTAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LQSAPSGHYFNM*DAPGPIFYLET Trigger: TGTTTCTAGATAGAATATTGGTCCTGGAGCATCTCACATATTAAAGTAGTGTCCACTGGGTGCACTCTGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS TCA 72 bp | ATAATGCATGACCCTAGAGAATCAAGCATCATCTTGTaGAATGCAAGGCTTGTCTTGGGCAGCTGCTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: IMHDPRESSIIL*NARLVLGSCLS Trigger: AGATAAGCAGCTGCCCAAGACAAGCCTTGCATTTCACAAGATGATGCTTGATTCTCTAGGGTCATGCATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000676586.1 |
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| CDS CCA 72 bp | TCCATACCCCTCATTTCTACAAATGTACTTAATGGTTaGGTTCACCTTCAGGCTATACAGAAACAGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SIPLISTNVLNG*VHLQAIQKQHG Trigger: GCCATGCTGTTTCTGTATAGCCTGAAGGTGAACCCAACCATTAAGTACATTTGTAGAAATGAGGGGTATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000474793.6 ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS CAA 72 bp | ACTTCTTCCTGGAATCTGTCTCCAAACCTGTTTTTGTaGGATGCCTTCTTCTATGTTCCCACATCACACTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSSWNLSPNLFL*DAFFYVPTSHS Trigger: AGAGTGTGATGTGGGAACATAGAAGAAGGCATCCAACAAAAACAGGTTTGGAGACAGATTCCAGGAAGAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS TCA 72 bp | GGAATGCCCTTTTCTCAGACCTCTTCTATGGGAATCTaGTCGGTCATCCAAGATATATCTCAAATGTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: GMPFSQTSSMGI*SVIQDISQMSL Trigger: AAGTGACATTTGAGATATATCTTGGATGACCGATCAGATTCCCATAGAAGAGGTCTGAGAAAAGGGCATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS TCA 72 bp | ATGAACAAACAAAGGGATGGAAATGCGCTGTCACTTTaGAGGCAAAAATGGCACTACTGGCCTATCATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: MNKQRDGNALSL*RQKWHYWPIIF Trigger: AAAGATGATAGGCCAGTAGTGCCATTTTTGCCTTCAAAGTGACAGCGCATTTCCATCCCTTTGTTTGTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS CAA 72 bp | AATGAACAAACAAAGGGATGGAAATGCGCTGTCACTTaGAAGGCAAAAATGGCACTACTGGCCTATCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: NEQTKGWKCAVT*KAKMALLAYHL Trigger: AAGATGATAGGCCAGTAGTGCCATTTTTGCCTTCAAAGTGACAGCGCATTTCCATCCCTTTGTTTGTTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS CAA 90 bp | TTAGACATTACTTCTTCCTGGAATCTGTCTCCAAACCTGTTTTTGTaGGATGCCTTCTTCTATGTTCCCACATCACACTCTGTAAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: LDITSSWNLSPNLFL*DAFFYVPTSHSVRT Trigger: AGTCCTTACAGAGTGTGATGTGGGAACATAGAAGAAGGCATCCAACAAAAACAGGTTTGGAGACAGATTCCAGGAAGAAGTAATGTCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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| CDS CCA 72 bp | AAGAGAGATCTGTTTGATCTATCATCTGCTCAGTGCTaGGATAATCCTCTAAGATTTACATGTATCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KRDLFDLSSAQC*DNPLRFTCILQ Trigger: CTGCAGGATACATGTAAATCTTAGAGGATTATCCCAGCACTGAGCAGATGATAGATCAAACAGATCTCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS GCA 72 bp | ATGAAGAGAGATCTGTTTGATCTATCATCTGCTCAGTaGTGGGATAATCCTCTAAGATTTACATGTATCCTG | + |
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Preference number: 6 (lower is better) Translates to: MKRDLFDLSSAQ*WDNPLRFTCIL Trigger: CAGGATACATGTAAATCTTAGAGGATTATCCCAGCACTGAGCAGATGATAGATCAAACAGATCTCTCTTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000676586.1 ENST00000677136.1 ENST00000678379.1 ENST00000679202.1 |
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| CDS TCA 72 bp | TACCACATGACACACCTATCTGTGAATATCAGAATCTaGAGTTATATATCATGTGTAGGCCAATCTCTTAAG | + |
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Preference number: 6 (lower is better) Translates to: YHMTHLSVNIRI*SYISCVGQSLK Trigger: CTTAAGAGATTGGCCTACACATGATATATAACTTCAGATTCTGATATTCACAGATAGGTGTGTCATGTGGTA 36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000677806.1 ENST00000678813.1 |
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