RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKN (Homo sapiens)

Ensembl gene IDs: ENSG00000185345

Ensembl transcript IDs: ENST00000338468.8, ENST00000366892.5, ENST00000366894.6, ENST00000366896.5, ENST00000366897.5, ENST00000366898.6, ENST00000479615.5, ENST00000612485.1, ENST00000612540.1, ENST00000615065.1, ENST00000642604.1, ENST00000647006.2, ENST00000648830.1, ENST00000673871.1, ENST00000674006.1, ENST00000674176.1, ENST00000674224.1, ENST00000674232.1, ENST00000674250.1, ENST00000674259.1, ENST00000674353.1, ENST00000674395.1, ENST00000674436.1, ENST00000674493.1, ENST00000674501.1

Found 982 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGCCAGGGCGGGGG +
Preference number: 1 (lower is better)
Translates to: NPQPRPLPPSQVTFL*SGSGSSPAPQPGRG
Trigger: CCCCCGCCCTGGCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR GCA 90 bp GGGCGCCCGGCCGCCCTGGCTACACGTCGAACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGA +
Preference number: 1 (lower is better)
Translates to: GRPAALATRRTSGPP*RRGSTRSHSSSTTR
Trigger: TCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR CCA 90 bp TGTGGCGATGGGGCGCCCGGCCGCCCTGGCTACACGTCGAACCAGTaGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAG +
Preference number: 1 (lower is better)
Translates to: CGDGAPGRPGYTSNQ*SPMQTRFHSQPQFQ
Trigger: CTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCCCCATCGCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR TCA 90 bp GGCAGAAGGCAAACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGC +
Preference number: 1 (lower is better)
Translates to: GRRQTHSPGHCPLRR*LSSGQAPAAAPLHS
Trigger: GCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTGCCTTCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 90 bp GAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGATaGGGCGCCCGGCCGCCCTGGCTACACGTCGAACCAGTGGTCCCC +
Preference number: 1 (lower is better)
Translates to: ENEGRHWVCSPRMWR*GARPPWLHVEPVVP
Trigger: GGGGACCACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCCCCATCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR GCA 90 bp AGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACTTCATGTGCATGCAGCCTCCATTTT +
Preference number: 1 (lower is better)
Translates to: RRGSTRSHSSSTTRA*TGAADTSCACSLHF
Trigger: AAAATGGAGGCTGCATGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
3UTR CCA 90 bp GCCAGTGACACTAAGTCAGGCCTTGATCAGGGTCTGGACTCAGTATaGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCT +
Preference number: 1 (lower is better)
Translates to: ASDTKSGLDQGLDSV*TRATGCRGLMPATS
Trigger: AGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACCCTGATCAAGGCCTGACTTAGTGTCACTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CCA 90 bp TTAGTGGGACTGCCAGTGACACTAAGTCAGGCCTTGATCAGGGTCTaGACTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGC +
Preference number: 1 (lower is better)
Translates to: LVGLPVTLSQALIRV*TQYGHEPLGAGGSC
Trigger: GCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACCCTGATCAAGGCCTGACTTAGTGTCACTGGCAGTCCCACTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR GCA 90 bp GGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTaGCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTCGGGCGTGT +
Preference number: 1 (lower is better)
Translates to: GMQSSLGLADWTERV*QRGINPSDGESRAC
Trigger: ACACGCCCGACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CCA 90 bp GTAGTTGTTCCTGAGGCTTCAAATACGGCACTGCACTCCCCTTCATaGTACGCTTCTTTACATTCCCGGCAGAAGGCAAACCCACAGCCC +
Preference number: 1 (lower is better)
Translates to: VVVPEASNTALHSPS*YASLHSRQKANPQP
Trigger: GGGCTGTGGGTTTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGCCTCAGGAACAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR GCA 90 bp TCATGGGAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATaGAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAAA +
Preference number: 1 (lower is better)
Translates to: SWEQTLFRHRKPNAA*RLGRRNNANTIRKK
Trigger: TTTCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTCCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CCA 90 bp AGTCTTGTCACACAGTATAAGTGGAAACAGTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAAACCAGGACGGGGCTCCTGACGTCT +
Preference number: 1 (lower is better)
Translates to: SLVTQYKWKQSKQIT*RELHWKTRTGLLTS
Trigger: AGACGTCAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGACAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 90 bp TTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTaGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACA +
Preference number: 1 (lower is better)
Translates to: FYVSFGLPVTGLLSP*GHVGVGRFSDSEAT
Trigger: TGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CCA 90 bp AGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTaGGAAGGCGCAATAATGCAAACACCATCAGGAAGAAAGCTATGG +
Preference number: 1 (lower is better)
Translates to: SKPCSGTASPTQHAD*EGAIMQTPSGRKLW
Trigger: CCATAGCTTTCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR TCA 90 bp TACTGCTGGTACCGGTTGTACTGCTCTTCTCCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAGGAGTTGGGACAGCCAGCCACACAA +
Preference number: 1 (lower is better)
Translates to: YCWYRLYCSSPRILK*WSSLIKELGQPATQ
Trigger: TTGTGTGGCTGGCTGTCCCAACTCCTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 90 bp AAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTaGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGG +
Preference number: 1 (lower is better)
Translates to: KEYSSEFTVLREGLS*GTPGMQSSLGLADW
Trigger: CCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CCA 90 bp GTAGTTGTTCCTGAGGCTTCAAATACGGCACTGCACTCCCCTTCATaGTACGCTTCTTTACATTCCCGGCAGAAGGCAAATGCCAATGTG +
Preference number: 1 (lower is better)
Translates to: VVVPEASNTALHSPS*YASLHSRQKANANV
Trigger: CACATTGGCATTTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGCCTCAGGAACAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR GCA 90 bp GTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCCTTGTCAGAGGTGGGGTGTGCTCCA +
Preference number: 1 (lower is better)
Translates to: VHVMQVMFRLFVAIR*KATDVSLSEVGCAP
Trigger: TGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 90 bp CTTACTATAGAGACTTTGATCTGTCCACCATTTCTATGTGAGCTTTaGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGG +
Preference number: 1 (lower is better)
Translates to: LTIETLICPPFLCEL*ASCHRSVVTVGPCW
Trigger: CCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAATGGTGGACAGATCAAAGTCTCTATAGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR TCA 90 bp TTTTTCCCTTACTATAGAGACTTTGATCTGTCCACCATTTCTATGTaGGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCC +
Preference number: 1 (lower is better)
Translates to: FFPYYRDFDLSTISM*ALGFLSQVCCHRGA
Trigger: GGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAATGGTGGACAGATCAAAGTCTCTATAGTAAGGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR TCA 90 bp GCAAGTGATGTTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAA +
Preference number: 1 (lower is better)
Translates to: ASDVPTICCDQVQSY*CFLVRGGVCSTFKE
Trigger: TTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATCACTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR TCA 90 bp GCAGGGAGTAGCCAAGTTGAGGGTCGTGAACAAACTGCCGATCATTaGGTCTTGTCACACAGTATAAGTGGAAACAGTCTAAGCAAATCA +
Preference number: 1 (lower is better)
Translates to: AGSSQVEGREQTADH*VLSHSISGNSLSKS
Trigger: TGATTTGCTTAGACTGTTTCCACTTATACTGTGTGACAAGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 90 bp TTCTGCCTGTCTCGAATTCAGGTGAGAATGACCCATACAGATACATaGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAG +
Preference number: 1 (lower is better)
Translates to: FCLSRIQVRMTHTDT*IALESVLWYLCHPE
Trigger: CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGTATGGGTCATTCTCACCTGAATTCGAGACAGGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR TCA 90 bp GGTAAAAGGCAGGATATTAAATGTGAGAACTCTCTCTCCAGCTACTaGTTCTGCCTGTCTCGAATTCAGGTGAGAATGACCCATACAGAT +
Preference number: 1 (lower is better)
Translates to: GKRQDIKCENSLSSY*FCLSRIQVRMTHTD
Trigger: ATCTGTATGGGTCATTCTCACCTGAATTCGAGACAGGCAGAATCAGTAGCTGGAGAGAGAGTTCTCACATTTAATATCCTGCCTTTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR GCA 90 bp AAGAACATTACTGTTAAAGCCATGAATCTAGTTTGGAGAACCCACTaGAGTTCATTTTACAGAGAAACACCTTGTCAATGGCATCTTCAT +
Preference number: 1 (lower is better)
Translates to: KNITVKAMNLVWRTH*SSFYRETPCQWHLH
Trigger: ATGAAGATGCCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTCATGGCTTTAACAGTAATGTTCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CCA 90 bp CTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGCATCTTCATaGTGTTTACTGAAGGTAAAAGGCAGGATATTAAATGTGAGAACT +
Preference number: 1 (lower is better)
Translates to: LQFILQRNTLSMASS*CLLKVKGRILNVRT
Trigger: AGTTCTCACATTTAATATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp GTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGTGTCATCCGGAGGCTaGGAACGCCTGTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: VVPHADAVPLAATVPAPLVSSGG*ERLLVV
Trigger: CACCACCAACAGGCGTTCTCAGCCTCCGGATGACAC...GAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR TCA 90 bp GGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCGGTAGACCGGTGCAGGGCCTCTaGGACGACGGGACTGTCCTC +
Preference number: 2 (lower is better)
Translates to: GLPVTGLLSPWGHVGVGRPVQGL*DDGTVL
Trigger: GAGGACAGTCCCGTCGTCTCAGAGGCCCTGCACCGG...TCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp CCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCTCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGG +
Preference number: 2 (lower is better)
Translates to: PQPRPLPPSQVTFLWSGSSRGGS*TGKPGR
Trigger: CCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGA...GGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CCA 90 bp AACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 2 (lower is better)
Translates to: NQWSPMQTRFHSQPQFQHHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...GTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
3UTR-3UTR TCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCACCGGTGCAGGGCCTCTaGGACGACGGGACTGTCCTC +
Preference number: 2 (lower is better)
Translates to: FLCELWASCHRSVVTVGPPVQGL*DDGTVL
Trigger: GAGGACAGTCCCGTCGTCTCAGAGGCCCTGCACCGG...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGGTGCATGCAGCCTCCTaGGTAGTTGTTCCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMVHAAS*VVVPEA
Trigger: AGCCTCAGGAACAACTACTCAGGAGGCTGCATGCAC...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479615.5
3UTR-3UTR CCA 90 bp AACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACTTTTCCACTGGTACATaGCAGCGGGGACAGGGCTTG +
Preference number: 2 (lower is better)
Translates to: NQWSPMQTRFHSQPQFQHFSTGT*QRGQGL
Trigger: CAAGCCCTGTCCCCGCTGCCATGTACCAGTGGAAAA...GTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCTCTTGGTGGTGTCGCAGATaGCTCTGCTGTCTTGTGTGG +
Preference number: 2 (lower is better)
Translates to: LSMDTSHWVQGAHACHLSWWCRR*LCCLVW
Trigger: CCACACAAGACAGCAGAGCCATCTGCGACACCACCA...AGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCAGAAGGGAGCCACCTaGTTTGTCGCATCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSQKGAT*FVASGQ
Trigger: CTGGCCCGATGCGACAAATCAGGTGGCTCCCTTCTG...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp AAGGCAAACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGCAGGACACACTCCTCTaGACCATACTGCTGGTACCG +
Preference number: 2 (lower is better)
Translates to: KANPQPRPLPPSQVTFLWQDTLL*TILLVP
Trigger: CGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTG...CCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGGTAGACACTGGGTATaGTCCCCCAGGATGTGGCGA +
Preference number: 2 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRGRHWV*SPRMWR
Trigger: TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACC...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCGGTAGAGGTAGACACTGGGTATaGTCCCCCAGGATGTGGCGA +
Preference number: 2 (lower is better)
Translates to: GLPVTGLLSPWGHVGVGRGRHWV*SPRMWR
Trigger: TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACC...TCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCACCAGTCTCTCCCCGGTaGAGGGCCTCTGAGACGACG +
Preference number: 2 (lower is better)
Translates to: FLCELWASCHRSVVTVGPPVSPR*RASETT
Trigger: CGTCGTCTCAGAGGCCCTGCACCGGGGAGAGACTGG...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGAGCCATTCTCCCCAGTaGACAGATGAGGAAATCGGG +
Preference number: 2 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMSHSPQ*TDEEIG
Trigger: CCCGATTTCCTCATCTGTGCACTGGGGAGAATGGCT...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR CCA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATGGACACGAGCCACTaGGTGCAGGGGGCTCATGCC +
Preference number: 2 (lower is better)
Translates to: HRKPNAACRLGRRNNANTMDTSH*VQGAHA
Trigger: GGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCAT...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GGGGATCCTAGGGTGCCTGAGCTCATGGGAGCAAACCTTGTTCAGGCACCGCAAGGTCTGGACTCAGTATaGACACGAGCCACTGGGTGC +
Preference number: 2 (lower is better)
Translates to: GDPRVPELMGANLVQAPQGLDSV*TRATGC
Trigger: GCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACC...TTGCGGTGCCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCCTAGGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 90 bp ACATGGCAGCGGGGACAGGGCTTGGTGGTTTTCTTGATGGTTTCTTaGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCG +
Preference number: 2 (lower is better)
Translates to: TWQRGQGLVVFLMVS*EAASQRACSAALSS
Trigger: CGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTGCCATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCGTGTCATCCGGAGGCTaGGAACGCCTGTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: HRKPNAACRLGRRNNANTVSSGG*ERLLVV
Trigger: CACCACCAACAGGCGTTCTCAGCCTCCGGATGACAC...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGGGTATAAACCCTTCTaGTGGAGAGAGTCGGGCGTG +
Preference number: 2 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRGYKPF*WRESGV
Trigger: CACGCCCGACTCTCTCCATCAGAAGGGTTTATACCC...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp AGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCTTCAAATACGGCACTaGACTCCCCTTCATGGTACG +
Preference number: 2 (lower is better)
Translates to: SGPPCRRGSTRSHSSSTTLQIRH*TPLHGT
Trigger: CGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG...AGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
3UTR-3UTR GCA 90 bp GGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGCCAGTCTCTCCCCGGTaGAGGGCCTCTGAGACGACG +
Preference number: 2 (lower is better)
Translates to: GAMLESVDFQTVKPHEAVPVSPR*RASETT
Trigger: CGTCGTCTCAGAGGCCCTGCACCGGGGAGAGACTGG...CACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp TCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCGACACTTCATGTGCATaGAGCCTCCTGAGTAGTTGT +
Preference number: 2 (lower is better)
Translates to: SPMQTRFHSQPQFQHHSSDTSCA*SLLSSC
Trigger: ACAACTACTCAGGAGGCTGCATGCACATGAAGTGTC...GCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479615.5
3UTR-3UTR GCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGACCAATGTGTCCACGCTaGTCCTCAGGCAAGCCATTC +
Preference number: 2 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRPMCPR*SSGKPF
Trigger: GAATGGCTTGCCTGAGGAGCAGCGTGGACACATTGG...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR CCA 90 bp CAGTCTAAGCAAATCACGTGGCGGGAGTTGCACTGGAAAACCAGGACGGGGCTCGGGCAGTGTGGGGATTaGCATTCACCACTCATCCGG +
Preference number: 2 (lower is better)
Translates to: QSKQITWRELHWKTRTGLGQCGD*HSPLIR
Trigger: CCGGATGAGTGGTGAATGCCAATCCCCACACTGCCC...GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CCA 90 bp GGGGATCCTAGGGTGCCTGAGCTCATGGGAGCAAACCTTGTTCAGGCACCGCAAAGAGAAGGTCTCTCCTaGGGAACCCCTGGTATGCAG +
Preference number: 2 (lower is better)
Translates to: GDPRVPELMGANLVQAPQREGLS*GTPGMQ
Trigger: CTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCT...TTGCGGTGCCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCCTAGGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGCTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACT +
Preference number: 2 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMLSSCS*GFKYGT
Trigger: AGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAG...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
3UTR-3UTR CCA 90 bp CGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAAGGCAAGGGCAGTGTGGGGATTaGCATTCACCACTCATCCGG +
Preference number: 2 (lower is better)
Translates to: RHCTPLHGTLLYIPGRRQGQCGD*HSPLIR
Trigger: CCGGATGAGTGGTGAATGCCAATCCCCACACTGCCC...TTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 2 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCAATGAAGGTAGACACTaGGTATGCTCCCCCAGGATG +
Preference number: 2 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVNEGRH*VCSPRM
Trigger: CATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTATGGTGGTGTCGCAGATaGCTCTGCTGTCTTGTGTGG +
Preference number: 2 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVWWCRR*LCCLVW
Trigger: CCACACAAGACAGCAGAGCCATCTGCGACACCACCA...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTAGAGAAGGTCTCTCCTaGGGAACCCCTGGTATGCAG +
Preference number: 2 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSREGLS*GTPGMQ
Trigger: CTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCT...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCGGTAGAGCCTTGATCAGGGTCTaGACTCAGTATGGACACGAG +
Preference number: 2 (lower is better)
Translates to: GLPVTGLLSPWGHVGVGRALIRV*TQYGHE
Trigger: CTCGTGTCCATACTGAGTCCAGACCCTGATCAAGGC...TCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp CGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCAGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: RSHSSSTTRACTGAADTSVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...TGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTAAGCCCAACGCAGCATaGAGATTGGGAAGGCGCAAT +
Preference number: 2 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSKPNAA*RLGRRN
Trigger: ATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTT...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCCCGGCAGAAGGCAAATaGCAATGTGTCCACGCTGCT +
Preference number: 2 (lower is better)
Translates to: HRKPNAACRLGRRNNANTPAEGK*QCVHAA
Trigger: AGCAGCGTGGACACATTGGCATTTGCCTTCTGCCGG...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGGTATGCAGAGCTCCCTaGGACTTGCAGATTGGACAG +
Preference number: 2 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRVCRAP*DLQIGQ
Trigger: CTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATAC...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCTCTGGGACTGTCCTCAGATaGTTGGAAGAAATGGGTTAT +
Preference number: 2 (lower is better)
Translates to: LSMDTSHWVQGAHACHLSGTVLR*LEEMGY
Trigger: ATAACCCATTTCTTCCAACCATCTGAGGACAGTCCC...AGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCAGGGTATAAACCCTTCTaGTGGAGAGAGTCGGGCGTG +
Preference number: 2 (lower is better)
Translates to: FLCELWASCHRSVVTVGPGYKPF*WRESGV
Trigger: CACGCCCGACTCTCTCCATCAGAAGGGTTTATACCC...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp TCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGGGTAGACACTGGGTATaGTCCCCCAGGATGTGGCGA +
Preference number: 2 (lower is better)
Translates to: SNTALHSPSWYASLHSRQGRHWV*SPRMWR
Trigger: TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACC...CTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR GCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTATGTCGCAGATGGCTCTaGTGTCTTGTGTGGACAAAC +
Preference number: 2 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVCRRWL*CLVWTN
Trigger: GTTTGTCCACACAAGACAGCAGAGCCATCTGCGACA...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGTGTCGCAGATGGCTCTaGTGTCTTGTGTGGACAAAC +
Preference number: 2 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRCRRWL*CLVWTN
Trigger: GTTTGTCCACACAAGACAGCAGAGCCATCTGCGACA...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGTTTGGAGAACCCACTaGAGTTCATTTTACAGAGAA +
Preference number: 2 (lower is better)
Translates to: VVPHADAVPLAATVPAPLVWRTH*SSFYRE
Trigger: TTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAAC...GAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR GCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGTGGACAGAGAGGGTGTaGCAAAGGGGTATAAACCCT +
Preference number: 2 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRWTERV*QRGINP
Trigger: AGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCA...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATACACGAGCCACTGGGTaGAGGGGGCTCATGCCTGCC +
Preference number: 2 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNTRATG*RGLMPA
Trigger: GGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGT...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp TTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATC +
Preference number: 2 (lower is better)
Translates to: LPPSQVTFLWSGSGSSPAVTQYK*KQSKQI
Trigger: GATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC...AGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTAAATGAAGGTAGACACTaGGTATGCTCCCCCAGGATG +
Preference number: 2 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVNEGRH*VCSPRM
Trigger: CATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCGAGAACGCCTGTTGGTaGTGTCGCAGATGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACENACW*CRRWLC
Trigger: GCAGAGCCATCTGCGACACCACCAACAGGCGTTCTC...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCTCTTCTGCGTAGTGTaGGTAAGAGCATGCGGTTTG +
Preference number: 2 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSLFCVV*VRACGL
Trigger: CAAACCGCATGCTCTTACCCACACTACGCAGAAGAG...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 90 bp CAAGGAGTTGGGACAGCCAGCCACACAAGGCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTGCCGATCATTGAGTCTTGTCACACA +
Preference number: 2 (lower is better)
Translates to: QGVGTASHTRQGVAK*RVVNKLPIIESCHT
Trigger: TGTGTGACAAGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTGCCTTGTGTGGCTGGCTGTCCCAACTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CAA 90 bp GCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTaGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTG +
Preference number: 2 (lower is better)
Translates to: ALGFLSQVCCHRGAM*ESVDFQTVKPHEAV
Trigger: CACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp GAAGGCAAACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGCAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 2 (lower is better)
Translates to: EGKPTAQAIAPFAGDFPLQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...CAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTGCCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTAGACACTGGGTATaGTCCCCCAGGATGTGGCGA +
Preference number: 2 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGGRHWV*SPRMWR
Trigger: TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACC...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp TGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGTCCAGGAGTTTCTTCTaGAATTTGGCTGTAGTTGGA +
Preference number: 2 (lower is better)
Translates to: WRLLPNEPARRLFHRLCRSRSFF*NLAVVG
Trigger: TCCAACTACAGCCAAATTGCAGAAGAAACTCCTGGA...CCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR GCA 90 bp GGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGGTGTGGGTAAGAGCATaGGGTTTGCCGCATGCAGTG +
Preference number: 2 (lower is better)
Translates to: GAMLESVDFQTVKPHEAVVWVRA*GLPHAV
Trigger: CACTGCATGCGGCAAACCGCATGCTCTTACCCACAC...CACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAAGGCAATCTGCACCATACTGCTaGTACCGGTTGTACTGCTCT +
Preference number: 2 (lower is better)
Translates to: RHCTPLHGTLLYIPGRRQSAPYC*YRLYCS
Trigger: AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGA...TTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAGGTCTGGACTCAGTATaGACACGAGCCACTGGGTGC +
Preference number: 2 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRGLDSV*TRATGC
Trigger: GCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACC...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTACGCAGCATGCAGATTaGGAAGGCGCAATAATGCAA +
Preference number: 2 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSTQHAD*EGAIMQ
Trigger: TTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGT...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 90 bp ACACAGTATAAGTGGAAACAGTCTAAGCAAATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACGGGGCTCCTGACGTCTGTGCACGTA +
Preference number: 2 (lower is better)
Translates to: TQYKWKQSKQITWRE*HWKTRTGLLTSVHV
Trigger: TACGTGCACAGACGTCAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CAA 90 bp AGGAAGTGTAATTTAGTGGGACTGCCAGTGACACTAAGTCAGGCCTaGATCAGGGTCTGGACTCAGTATGGACACGAGCCACTGGGTGCA +
Preference number: 2 (lower is better)
Translates to: RKCNLVGLPVTLSQA*IRVWTQYGHEPLGA
Trigger: TGCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACCCTGATCAAGGCCTGACTTAGTGTCACTGGCAGTCCCACTAAATTACACTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp TCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGTCCTCTGCACCATACTaGTGGTACCGGTTGTACTGC +
Preference number: 2 (lower is better)
Translates to: SNTALHSPSWYASLHSRQSSAPY*WYRLYC
Trigger: GCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGA...CTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAGCTTCCCAACGAGCCTaGTCGGCGGCTCTTTCATCG +
Preference number: 2 (lower is better)
Translates to: ERVGRVFILVVLERLLFKASQRA*SAALSS
Trigger: CGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGC...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR GCA 90 bp GGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCGGTAGATTGTACTTTCTCTTCTaGGTAGTGTGGGTAAGAGCA +
Preference number: 2 (lower is better)
Translates to: GLPVTGLLSPWGHVGVGRLYFLF*VVWVRA
Trigger: TGCTCTTACCCACACTACGCAGAAGAGAAAGTACAA...TCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCAATGAAGGTAGACACTaGGTATGCTCCCCCAGGATG +
Preference number: 2 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSNEGRH*VCSPRM
Trigger: CATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTCTGGGACTTGCAGATTaGACAGAGAGGGTGTGCCAA +
Preference number: 2 (lower is better)
Translates to: GPPCASETHALSYVHDLPLGLAD*TERVCQ
Trigger: TTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAG...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CTCAGATGGTTGGAAGAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGCTCCTGGGGAACCCCTaGTATGCAGAGCTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: LRWLEEMGYLRQLGKEGQLLGNP*YAELPG
Trigger: CCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG...CTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTCTTCCAACCATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATAGGCGCCCGGCCGCCCTaGCTACACGTCGAACCAGTG +
Preference number: 2 (lower is better)
Translates to: SKDFSATSKKRSPVADLIGARPP*LHVEPV
Trigger: CACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCC...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR CAA 90 bp GTCCACCATTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTaGTCACCGTGGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGT +
Preference number: 2 (lower is better)
Translates to: VHHFYVSFGLPVTGL*SPWGHVGVGRFSDS
Trigger: ACTGTCTGAAAATCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAATGGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 90 bp TGGAAAACACTGTGTGCTCCACGTGACAGAAGGGAGCCACCTGATTaGTCGCATCGGGCCAGTGTAAGGAAGTGTAATTTAGTGGGACTG +
Preference number: 2 (lower is better)
Translates to: WKTLCAPRDRREPPD*SHRASVRKCNLVGL
Trigger: CAGTCCCACTAAATTACACTTCCTTACACTGGCCCGATGCGACAAATCAGGTGGCTCCCTTCTGTCACGTGGAGCACACAGTGTTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATaGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAAAGCTATG +
Preference number: 2 (lower is better)
Translates to: EQTLFRHRKPNAACR*GRRNNANTIRKKAM
Trigger: CATAGCTTTCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp GACACACTCCTCTGCACCATACTGCTGGTACCGGTTGTACTGCTCTTCTCCCAGCCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAG +
Preference number: 2 (lower is better)
Translates to: DTLLCTILLVPVVLLFSQPRILK*WSSLIK
Trigger: CTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGG...CTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp CAAGGAGTTGGGACAGCCAGCCACACAAGGCAGGGAGTAGCCAAGTTGAGGGTCTTTAAAGAAAAATTCTaGACTAGTCCCAGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: QGVGTASHTRQGVAKLRVFKEKF*TSPRAV
Trigger: CACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAA...GACCCTCAACTTGGCTACTCCCTGCCTTGTGTGGCTGGCTGTCCCAACTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp GAGCTCTTTAATCAAGGAGTTGGGACAGCCAGCCACACAAGGCAGGGAGTAGCCGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 2 (lower is better)
Translates to: ELFNQGVGTASHTRQGVAVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...GGCTACTCCCTGCCTTGTGTGGCTGGCTGTCCCAACTCCTTGATTAAAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAGCTGAGAACGCCTGTTaGTGGTGTCGCAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: ERVGRVFILVVLERLLFKAENAC*WCRRWL
Trigger: GAGCCATCTGCGACACCACCAACAGGCGTTCTCAGC...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CAA 90 bp AGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCTaGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATT +
Preference number: 2 (lower is better)
Translates to: RLRTPVGGVADGSAV*CGQTERDSGASSVI
Trigger: AATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp GGAAGGCGCAATAATGCAAACACCATCAGGAAGAAAGCTATGGATGATGGAAAACAGAAGGGAGCCACCTaGTTTGTCGCATCGGGCCAG +
Preference number: 2 (lower is better)
Translates to: GRRNNANTIRKKAMDDGKQKGAT*FVASGQ
Trigger: CTGGCCCGATGCGACAAATCAGGTGGCTCCCTTCTG...TTTTCCATCATCCATAGCTTTCTTCCTGATGGTGTTTGCATTATTGCGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCTCCAGGAGTTTCTTCTaGAATTTGGCTGTAGTTGGA +
Preference number: 2 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELSRSFF*NLAVVG
Trigger: TCCAACTACAGCCAAATTGCAGAAGAAACTCCTGGA...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTGTCGCAGATGGCTCTaGTGTCTTGTGTGGACAAAC +
Preference number: 2 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGCRRWL*CLVWTN
Trigger: GTTTGTCCACACAAGACAGCAGAGCCATCTGCGACA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTAGTTTGGAGAACCCACTaGAGTTCATTTTACAGAGAA +
Preference number: 2 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVVWRTH*SSFYRE
Trigger: TTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAAC...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGGAAACACCTTGTCAATaGCATCTTCATGGTGTTTAC +
Preference number: 2 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRETPCQ*HLHGVY
Trigger: GTAAACACCATGAAGATGCCATTGACAAGGTGTTTC...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCTTGCACTTGAATCTGTaGTCTGGTATTTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELLHLNL*SGICVI
Trigger: GATGACACAAATACCAGAGCACAGATTCAAGTGCAA...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGACTGCACTCCCCTTCATaGTACGCTTCTTTACATTCC +
Preference number: 2 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRLHSPS*YASLHS
Trigger: GGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAG...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGAGAACGCCTGTTGGTaGTGTCGCAGATGGCTCTGC +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGENACW*CRRWLC
Trigger: GCAGAGCCATCTGCGACACCACCAACAGGCGTTCTC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCACCCATACAGATACATaGATTGCACTTGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELTHTDT*IALESV
Trigger: CACAGATTCAAGTGCAATCCATGTATCTGTATGGGT...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTGCCATGAATCTAGTTTaGAGAACCCACTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: GPPCASETHALSYVHDLPAMNLV*RTHCSS
Trigger: TGAACTGCAGTGGGTTCTCCAAACTAGATTCATGGC...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTTTTTTGACTATTGCCTaGGGTTCTTTGGGAATAGAT +
Preference number: 2 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSFLTIA*GSLGID
Trigger: ATCTATTCCCAAAGAACCCCAGGCAATAGTCAAAAA...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 90 bp AAACTTGAAGAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTaGAAAAGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCC +
Preference number: 2 (lower is better)
Translates to: KLEECVCARARVCVC*KRELENEGRHWVCS
Trigger: GGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTCTTCAAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp CTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: LQIRHCTPLHGTLLYIPGVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...GCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGAGCTCCCTGGGACTTaGAGATTGGACAGAGAGGGT +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGELPGT*RLDREG
Trigger: ACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTAAAGAGAAGCCCTGTTaGCGATTTAATAATTTACAG +
Preference number: 2 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSKEKPC*RFNNLQ
Trigger: CTGTAAATTATTAAATCGGCAACAGGGCTTCTCTTT...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATACACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 2 (lower is better)
Translates to: SKDFSATSKKRSPVADLIHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGATGGTGGTGTCGCAGATaGCTCTGCTGTCTTGTGTGG +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGWWCRR*LCCLVW
Trigger: CCACACAAGACAGCAGAGCCATCTGCGACACCACCA...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAAGAGAAGGTCTCTCCTaGGGAACCCCTGGTATGCAG +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGREGLS*GTPGMQ
Trigger: CTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCT...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GGAAGGCGCAATAATGCAAACACCATCAGGAAGAAAGCTATGGATGATGGAAAAGGGTGCCTGAGCTCATaGGAGCAAACCTTGTTCAGG +
Preference number: 2 (lower is better)
Translates to: GRRNNANTIRKKAMDDGKGCLSS*EQTLFR
Trigger: CCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCC...TTTTCCATCATCCATAGCTTTCTTCCTGATGGTGTTTGCATTATTGCGCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGTGTCATCCGGAGGCTaGGAACGCCTGTTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: FNNLQSLNPKGPPCASETVSSGG*ERLLVV
Trigger: CACCACCAACAGGCGTTCTCAGCCTCCGGATGACAC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAATCTCTCTCCAGCTACTaGTTCTGCCTGTCTCGAATT +
Preference number: 2 (lower is better)
Translates to: ERVGRVFILVVLERLLFKSLSSY*FCLSRI
Trigger: AATTCGAGACAGGCAGAATCAGTAGCTGGAGAGAGA...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp ACGGGGCTCCTGACGTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTTTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 2 (lower is better)
Translates to: TGLLTSVHVMQVMFRLFVFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...AACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGCCCCGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTGTTTGGAGAACCCACTaGAGTTCATTTTACAGAGAA +
Preference number: 2 (lower is better)
Translates to: GPPCASETHALSYVHDLPVWRTH*SSFYRE
Trigger: TTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAAC...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCATGGTGGTGTCGCAGATaGCTCTGCTGTCTTGTGTGG +
Preference number: 2 (lower is better)
Translates to: ESSLENPLQFILQRNTLSWWCRR*LCCLVW
Trigger: CCACACAAGACAGCAGAGCCATCTGCGACACCACCA...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTACCCATACAGATACATaGATTGCACTTGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: GPPCASETHALSYVHDLPTHTDT*IALESV
Trigger: CACAGATTCAAGTGCAATCCATGTATCTGTATGGGT...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGTATGCAGAGCTCCCTaGGACTTGCAGATTGGACAG +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGVCRAP*DLQIGQ
Trigger: CTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATAC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCCTGTCCTCAGATGGTTaGAAGAAATGGGTTATCTTA +
Preference number: 2 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACLSSDG*KKWVIL
Trigger: TAAGATAACCCATTTCTTCCAACCATCTGAGGACAG...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTTACATGGATTGCACTTaGATCTGTGCTCTGGTATTT +
Preference number: 2 (lower is better)
Translates to: DWTERVCQRGINPSDGESYMDCT*ICALVF
Trigger: AAATACCAGAGCACAGATTCAAGTGCAATCCATGTA...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp CTCAGATGGTTGGAAGAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGTCTCTCTCCAGCTACTaGTTCTGCCTGTCTCGAATT +
Preference number: 2 (lower is better)
Translates to: LRWLEEMGYLRQLGKEGQSLSSY*FCLSRI
Trigger: AATTCGAGACAGGCAGAATCAGTAGCTGGAGAGAGA...CTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTCTTCCAACCATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTTCCCCAGTGCACAGATaGGGAAATCGGGGCTCTGAG +
Preference number: 2 (lower is better)
Translates to: FNNLQSLNPKGPPCASETSPVHR*GNRGSE
Trigger: CTCAGAGCCCCGATTTCCTCATCTGTGCACTGGGGA...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR GCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTTTGCACTTGAATCTGTaGTCTGGTATTTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: DWTERVCQRGINPSDGESLHLNL*SGICVI
Trigger: GATGACACAAATACCAGAGCACAGATTCAAGTGCAA...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAAATGAAGGTAGACACTaGGTATGCTCCCCCAGGATG +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGNEGRH*VCSPRM
Trigger: CATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGCTGAGAACGCCTGTTaGTGGTGTCGCAGATGGCTC +
Preference number: 2 (lower is better)
Translates to: FNNLQSLNPKGPPCASETAENAC*WCRRWL
Trigger: GAGCCATCTGCGACACCACCAACAGGCGTTCTCAGC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAGCCATGAATCTAGTTTaGAGAACCCACTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: ERVGRVFILVVLERLLFKAMNLV*RTHCSS
Trigger: TGAACTGCAGTGGGTTCTCCAAACTAGATTCATGGC...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGGGTATAAACCCTTCTaGTGGAGAGAGTCGGGCGTG +
Preference number: 2 (lower is better)
Translates to: FNNLQSLNPKGPPCASETGYKPF*WRESGV
Trigger: CACGCCCGACTCTCTCCATCAGAAGGGTTTATACCC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAGTGTTGTTAATCTTTTaGTTGTGTTGTGAATGGCTG +
Preference number: 2 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRVLLIF*LCCEWL
Trigger: CAGCCATTCACAACACAATCAAAAGATTAACAACAC...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 90 bp TTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATTCTGCA +
Preference number: 2 (lower is better)
Translates to: FRLFVAIRCKATDVS*SEVGCAPHLKKNSA
Trigger: TGCAGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR TCA 90 bp CGATCATTGAGTCTTGTCACACAGTATAAGTGGAAACAGTCTAAGCAAATCACGCAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 2 (lower is better)
Translates to: RSLSLVTQYKWKQSKQITQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...CGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGACAAGACTCAATGATCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR GCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTTGTCGCAGATGGCTCTaGTGTCTTGTGTGGACAAAC +
Preference number: 2 (lower is better)
Translates to: FNNLQSLNPKGPPCASETCRRWL*CLVWTN
Trigger: GTTTGTCCACACAAGACAGCAGAGCCATCTGCGACA...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATCTTGAATCTGTGCTCTaGTATTTGTGTCATCCGGAG +
Preference number: 2 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDLESVL*YLCHPE
Trigger: CTCCGGATGACACAAATACCAGAGCACAGATTCAAG...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGATACATGGATTGCACTTaGATCTGTGCTCTGGTATTT +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGYMDCT*ICALVF
Trigger: AAATACCAGAGCACAGATTCAAGTGCAATCCATGTA...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCATCCAGGAGTTTCTTCTaGAATTTGGCTGTAGTTGGA +
Preference number: 2 (lower is better)
Translates to: ESSLENPLQFILQRNTLSSRSFF*NLAVVG
Trigger: TCCAACTACAGCCAAATTGCAGAAGAAACTCCTGGA...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCTCCAGGAGTTTCTTCTaGAATTTGGCTGTAGTTGGA +
Preference number: 2 (lower is better)
Translates to: VLCGQTERDSGASSVILLSRSFF*NLAVVG
Trigger: TCCAACTACAGCCAAATTGCAGAAGAAACTCCTGGA...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp GGAAGGCGCAATAATGCAAACACCATCAGGAAGAAAGCTATGGATGATGGAAAATTGCACTTGAATCTGTaGTCTGGTATTTGTGTCATC +
Preference number: 2 (lower is better)
Translates to: GRRNNANTIRKKAMDDGKLHLNL*SGICVI
Trigger: GATGACACAAATACCAGAGCACAGATTCAAGTGCAA...TTTTCCATCATCCATAGCTTTCTTCCTGATGGTGTTTGCATTATTGCGCCTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGAAACACCTTGTCAATaGCATCTTCATGGTGTTTAC +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGETPCQ*HLHGVY
Trigger: GTAAACACCATGAAGATGCCATTGACAAGGTGTTTC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTGAACGATGTATTGAATaGGGCACTCACTTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: FPHLELCNSSIALLPMTFERCIE*GTHFSL
Trigger: CAGGGAGAAGTGAGTGCCTCATTCAATACATCGTTC...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
3UTR-3UTR TCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGTGTTGTTAATCTTTTaGTTGTGTTGTGAATGGCTG +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGVLLIF*LCCEWL
Trigger: CAGCCATTCACAACACAATCAAAAGATTAACAACAC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAGGCTTTTTCCACATCTaGAACTCTGTAATTCTTCTA +
Preference number: 2 (lower is better)
Translates to: ARVNSQASYNKSVNHILIGFFHI*NSVILL
Trigger: TAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCC...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
3UTR-3UTR CCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAACCCATACAGATACATaGATTGCACTTGAATCTGTG +
Preference number: 2 (lower is better)
Translates to: ESSLENPLQFILQRNTLSTHTDT*IALESV
Trigger: CACAGATTCAAGTGCAATCCATGTATCTGTATGGGT...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGATTTTTGACTATTGCCTaGGGTTCTTTGGGAATAGAT +
Preference number: 2 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGFLTIA*GSLGID
Trigger: ATCTATTCCCAAAGAACCCCAGGCAATAGTCAAAAA...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR TCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATATACATGGATTGCACTTaGATCTGTGCTCTGGTATTT +
Preference number: 2 (lower is better)
Translates to: SKDFSATSKKRSPVADLIYMDCT*ICALVF
Trigger: AAATACCAGAGCACAGATTCAAGTGCAATCCATGTA...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR GCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTTTGTACTTTCTCTTCTaGGTAGTGTGGGTAAGAGCA +
Preference number: 2 (lower is better)
Translates to: FNNLQSLNPKGPPCASETLYFLF*VVWVRA
Trigger: TGCTCTTACCCACACTACGCAGAAGAGAAAGTACAA...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGAAACACCTTGTCAATaGCATCTTCATGGTGTTTAC +
Preference number: 2 (lower is better)
Translates to: FNNLQSLNPKGPPCASETETPCQ*HLHGVY
Trigger: GTAAACACCATGAAGATGCCATTGACAAGGTGTTTC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp GGGGCGCCCGGCCGCCCTGGCTACACGTCGAACCAGTaGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCA +
Preference number: 3 (lower is better)
Translates to: GAPGRPGYTSNQ*SPMQTRFHSQP
Trigger: TGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR CCA 72 bp CCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGCCA +
Preference number: 3 (lower is better)
Translates to: PRPLPPSQVTFL*SGSGSSPAPQP
Trigger: TGGCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 72 bp GGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGATaGGGCGCCCGGCCGCCCTGGCTACACGTCGAACCA +
Preference number: 3 (lower is better)
Translates to: GRHWVCSPRMWR*GARPPWLHVEP
Trigger: TGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCCCCATCGCCACATCCTGGGGGAGCATACCCAGTGTCTACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR TCA 72 bp CAAACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCG +
Preference number: 3 (lower is better)
Translates to: QTHSPGHCPLRR*LSSGQAPAAAP
Trigger: CGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR GCA 72 bp GCCGCCCTGGCTACACGTCGAACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGCAGCCACAGTTCCAGC +
Preference number: 3 (lower is better)
Translates to: AALATRRTSGPP*RRGSTRSHSSS
Trigger: GCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAGCCAGGGCGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR CCA 72 bp AATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTaGCGATGGGGCGCCCGGCCGCCCTGGCTACACGTC +
Preference number: 3 (lower is better)
Translates to: NEGRHWVCSPRM*RWGARPPWLHV
Trigger: GACGTGTAGCCAGGGCGGCCGGGCGCCCCATCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR CAA 90 bp CGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCAAGGGCAGTGTGGGGATaGGCATTCACCACTCATCCG +
Preference number: 3 (lower is better)
Translates to: RSHSSSTTRACTGAADTSRAVWG*AFTTHP
Trigger: CGGATGAGTGGTGAATGCCAATCCCCACACTGCCCT...TGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR TCA 72 bp GCTGCAGAGCCCAGTCTCTCCCCGGTGCAGGGCCTCTaGGACGACGGGACTGTCCTCAGATGGTTGGAAGAA +
Preference number: 3 (lower is better)
Translates to: AAEPSLSPVQGL*DDGTVLRWLEE
Trigger: TTCTTCCAACCATCTGAGGACAGTCCCGTCGTCTCAGAGGCCCTGCACCGGGGAGAGACTGGGCTCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR GCA 72 bp TCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACTTCATGTGCATGCAGC +
Preference number: 3 (lower is better)
Translates to: STRSHSSSTTRA*TGAADTSCACS
Trigger: GCTGCATGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
3UTR-3UTR CAA 90 bp AACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 3 (lower is better)
Translates to: NQWSPMQTRFHSQPQFQHATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...GTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CAA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTAGGGAGCCACCTGATTaGTCGCATCGGGCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSREPPD*SHRASV
Trigger: TACACTGGCCCGATGCGACAAATCAGGTGGCTCCCT...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp GTCTCTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTaGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAA +
Preference number: 3 (lower is better)
Translates to: VSPGEPLVCRAP*DLQIGQRGCAK
Trigger: TTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp ACTAAGTCAGGCCTTGATCAGGGTCTGGACTCAGTATaGACACGAGCCACTGGGTGCAGGGGGCTCATGCCT +
Preference number: 3 (lower is better)
Translates to: TKSGLDQGLDSV*TRATGCRGLMP
Trigger: AGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACCCTGATCAAGGCCTGACTTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp CTGCCAGTGACACTAAGTCAGGCCTTGATCAGGGTCTaGACTCAGTATGGACACGAGCCACTGGGTGCAGGG +
Preference number: 3 (lower is better)
Translates to: LPVTLSQALIRV*TQYGHEPLGAG
Trigger: CCCTGCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACCCTGATCAAGGCCTGACTTAGTGTCACTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCAGGGAGCCACCTGATTaGTCGCATCGGGCCAGTGTA +
Preference number: 3 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELREPPD*SHRASV
Trigger: TACACTGGCCCGATGCGACAAATCAGGTGGCTCCCT...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GCGATCAGGTGCAAAGCTACTGATGTTTCCTTGTCAGAGGTGGGGTGTGCTCCAAGGGCAGTGTGGGGATaGGCATTCACCACTCATCCG +
Preference number: 3 (lower is better)
Translates to: AIRCKATDVSLSEVGCAPRAVWG*AFTTHP
Trigger: CGGATGAGTGGTGAATGCCAATCCCCACACTGCCCT...TGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CAA 90 bp CTGCTGGTACCGGTTGTACTGCTCTTCTCCCAGAATCCTGAAGTGATGGAGCTCATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 3 (lower is better)
Translates to: LLVPVVLLFSQNPEVMELITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...GAGCTCCATCACTTCAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CAA 90 bp CCCCATCTGCAGGACACACTCCTCTGCACCATACTGCTGGTACCGGTTGTACTGTACTGCTGGTACCGGTaGTACTGCTCTTCTCCCAGA +
Preference number: 3 (lower is better)
Translates to: PHLQDTLLCTILLVPVVLYCWYR*YCSSPR
Trigger: TCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA...CAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTGCAGATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 72 bp AAACAGTCTAAGCAAATCACGTGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTCCTGACGTCTGTGCAC +
Preference number: 3 (lower is better)
Translates to: KQSKQITWRELH*KTRTGLLTSVH
Trigger: GTGCACAGACGTCAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 72 bp CCCATCTGCAGGACACACTCCTCTGCACCATACTGCTaGTACCGGTTGTACTGCTCTTCTCCCAGAATCCTG +
Preference number: 3 (lower is better)
Translates to: PICRTHSSAPYC*YRLYCSSPRIL
Trigger: CAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTGCAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR CCA 72 bp ACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTaGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCT +
Preference number: 3 (lower is better)
Translates to: TPGMQSSLGLAD*TERVCQRGINP
Trigger: AGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp TACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTaGTATGCAGAGCTCCCTGGGACTTGCAGATTGGAC +
Preference number: 3 (lower is better)
Translates to: YCPKRRSLLGNP*YAELPGTCRLD
Trigger: GTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCACAGCGGGGACAGGGCTaGGTGGTTTTCTTGATGGTT +
Preference number: 3 (lower is better)
Translates to: FLCELWASCHRSVVTVGPQRGQG*VVFLMV
Trigger: AACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTG...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR CAA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTAGATGGCTCTGCTGTCTaGTGTGGACAAACTGAAAGG +
Preference number: 3 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVDGSAV*CGQTER
Trigger: CCTTTCAGTTTGTCCACACAAGACAGCAGAGCCATC...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCTCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELSVLWY*CHPEAE
Trigger: CTCAGCCTCCGGATGACACAAATACCAGAGCACAGA...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCAGAGCTCCCTGGGACTaGCAGATTGGACAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACRAPWD*QIGQRG
Trigger: CCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCT...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCGTAAGAGCATGCGGTTaGCCGCATGCAGTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELVRACG*PHAVLL
Trigger: TAACAACACTGCATGCGGCAAACCGCATGCTCTTAC...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGACCTGTCACAGGTCTGTaGTCACCGTGGGGCCATGTT +
Preference number: 3 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRPVTGL*SPWGHV
Trigger: AACATGGCCCCACGGTGACAACAGACCTGTGACAGG...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR GCA 72 bp AGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTaGCAAAGGGGTATAAACCCTTCTGATGGAGAGAGT +
Preference number: 3 (lower is better)
Translates to: SSLGLADWTERV*QRGINPSDGES
Trigger: ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR GCA 72 bp CAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATaGAGATTGGGAAGGCGCAATAATGCAAACACCATC +
Preference number: 3 (lower is better)
Translates to: QTLFRHRKPNAA*RLGRRNNANTI
Trigger: GATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp AGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTaGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGT +
Preference number: 3 (lower is better)
Translates to: SFGLPVTGLLSP*GHVGVGRFSDS
Trigger: ACTGTCTGAAAATCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp TGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTaGGAAGGCGCAATAATGCAAACACCATCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: CSGTASPTQHAD*EGAIMQTPSGR
Trigger: TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp TCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGTCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: SNTALHSPSWYASLHSRQSVLWY*CHPEAE
Trigger: CTCAGCCTCCGGATGACACAAATACCAGAGCACAGA...CTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR-3UTR CAA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCAGCCATGAATCTAGTTaGGAGAACCCACTGCAGTTC +
Preference number: 3 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELSHESS*ENPLQF
Trigger: GAACTGCAGTGGGTTCTCCAAACTAGATTCATGGCT...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTGGGCGTGTCTTCATTTaGGTAGTTCTGGAAAGGCTC +
Preference number: 3 (lower is better)
Translates to: GPPCASETHALSYVHDLPGRVFI*VVLERL
Trigger: GAGCCTTTCCAGAACTACCAAAATGAAGACACGCCC...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCGTAAGAGCATGCGGTTaGCCGCATGCAGTGTTGTTA +
Preference number: 3 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACVRACG*PHAVLL
Trigger: TAACAACACTGCATGCGGCAAACCGCATGCTCTTAC...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR TCA 72 bp ACTTCATGTGCATGCAGCCTCCTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACTGCACTCCCCTTCATG +
Preference number: 3 (lower is better)
Translates to: TSCACSLLSSCS*GFKYGTALPFM
Trigger: CATGAAGGGGAGTGCAGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAGGAGGCTGCATGCACATGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479615.5
3UTR CCA 72 bp GAGACTTTGATCTGTCCACCATTTCTATGTGAGCTTTaGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGG +
Preference number: 3 (lower is better)
Translates to: ETLICPPFLCEL*ASCHRSVVTVG
Trigger: CCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAATGGTGGACAGATCAAAGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GCCAAGTTGAGGGTCGTGAACAAACTGCCGATCATTGAGTCTTGTCACACAGTAGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 3 (lower is better)
Translates to: AKLRVVNKLPIIESCHTVATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...TACTGTGTGACAAGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CAA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTAATACATGGATTGCACTaGAATCTGTGCTCTGGTATT +
Preference number: 3 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVIHGLH*NLCSGI
Trigger: AATACCAGAGCACAGATTCAAGTGCAATCCATGTAT...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR TCA 72 bp GTTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACA +
Preference number: 3 (lower is better)
Translates to: VPTICCDQVQSY*CFLVRGGVCST
Trigger: TGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR TCA 72 bp TCTTTCATCGACTCTGTAGGCCTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACTGCACTCCCCTTCATG +
Preference number: 3 (lower is better)
Translates to: SFIDSVGLSSCS*GFKYGTALPFM
Trigger: CATGAAGGGGAGTGCAGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAGGCCTACAGAGTCGATGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGGATGGCTCTGCTGTCTaGTGTGGACAAACTGAAAGG +
Preference number: 3 (lower is better)
Translates to: EMGYLRQLGKEGQVSQDVDGSAV*CGQTER
Trigger: CCTTTCAGTTTGTCCACACAAGACAGCAGAGCCATC...CACATCCTGGGACACCTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATACATGGATTGCACTaGAATCTGTGCTCTGGTATT +
Preference number: 3 (lower is better)
Translates to: HRKPNAACRLGRRNNANTIHGLH*NLCSGI
Trigger: AATACCAGAGCACAGATTCAAGTGCAATCCATGTAT...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATACACTAAGTCAGGCCTaGATCAGGGTCTGGACTCAG +
Preference number: 3 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNTLSQA*IRVWTQ
Trigger: CTGAGTCCAGACCCTGATCAAGGCCTGACTTAGTGT...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCCTTACTATAGAGACTTaGATCTGTCCACCATTTCTA +
Preference number: 3 (lower is better)
Translates to: HRKPNAACRLGRRNNANTLTIET*ICPPFL
Trigger: TAGAAATGGTGGACAGATCAAAGTCTCTATAGTAAG...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGTCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWSVLWY*CHPEAE
Trigger: CTCAGCCTCCGGATGACACAAATACCAGAGCACAGA...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATAGCCATGAATCTAGTTaGGAGAACCCACTGCAGTTC +
Preference number: 3 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNSHESS*ENPLQF
Trigger: GAACTGCAGTGGGTTCTCCAAACTAGATTCATGGCT...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR GCA 72 bp ATGCAAGTGATGTTCCGACTATTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCCTTGTCAGAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: MQVMFRLFVAIR*KATDVSLSEVG
Trigger: CCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATCACTTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CAA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCGATGGCTCTGCTGTCTaGTGTGGACAAACTGAAAGG +
Preference number: 3 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGDGSAV*CGQTER
Trigger: CCTTTCAGTTTGTCCACACAAGACAGCAGAGCCATC...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAATACATGGATTGCACTaGAATCTGTGCTCTGGTATT +
Preference number: 3 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRIHGLH*NLCSGI
Trigger: AATACCAGAGCACAGATTCAAGTGCAATCCATGTAT...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCGATAAACAAATGTTTTaGACTATTGCCTGGGGTTCT +
Preference number: 3 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACDKQMF*TIAWGS
Trigger: AGAACCCCAGGCAATAGTCAAAAACATTTGTTTATC...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp AACTGCCGATCATTGAGTCTTGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATCACGTGGCGGGAGTTG +
Preference number: 3 (lower is better)
Translates to: NCRSLSLVTQYK*KQSKQITWREL
Trigger: CAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGACAAGACTCAATGATCGGCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR-3UTR CAA 90 bp CAAGTGATGTTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCCACCACTCATCCGGTTaGGAATTAAAACATCATCCC +
Preference number: 3 (lower is better)
Translates to: QVMFRLFVAIRCKATDVSHHSSG*ELKHHP
Trigger: GGGATGATGTTTTAATTCCAAACCGGATGAGTGGTG...GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366894.6
3UTR TCA 72 bp AGCCAAGTTGAGGGTCGTGAACAAACTGCCGATCATTaGGTCTTGTCACACAGTATAAGTGGAAACAGTCTA +
Preference number: 3 (lower is better)
Translates to: SQVEGREQTADH*VLSHSISGNSL
Trigger: TAGACTGTTTCCACTTATACTGTGTGACAAGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
3UTR TCA 72 bp CAGGATATTAAATGTGAGAACTCTCTCTCCAGCTACTaGTTCTGCCTGTCTCGAATTCAGGTGAGAATGACC +
Preference number: 3 (lower is better)
Translates to: QDIKCENSLSSY*FCLSRIQVRMT
Trigger: GGTCATTCTCACCTGAATTCGAGACAGGCAGAATCAGTAGCTGGAGAGAGAGTTCTCACATTTAATATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR TCA 72 bp TACTATAGAGACTTTGATCTGTCCACCATTTCTATGTaGGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCAC +
Preference number: 3 (lower is better)
Translates to: YYRDFDLSTISM*ALGFLSQVCCH
Trigger: GTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAATGGTGGACAGATCAAAGTCTCTATAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTTCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: FNNLQSLNPKGPPCASETSVLWY*CHPEAE
Trigger: CTCAGCCTCCGGATGACACAAATACCAGAGCACAGA...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAGATAAACAAATGTTTTaGACTATTGCCTGGGGTTCT +
Preference number: 3 (lower is better)
Translates to: ERVGRVFILVVLERLLFKDKQMF*TIAWGS
Trigger: AGAACCCCAGGCAATAGTCAAAAACATTTGTTTATC...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CCA 72 bp TCTCGAATTCAGGTGAGAATGACCCATACAGATACATaGATTGCACTTGAATCTGTGCTCTGGTATTTGTGT +
Preference number: 3 (lower is better)
Translates to: SRIQVRMTHTDT*IALESVLWYLC
Trigger: ACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGTATGGGTCATTCTCACCTGAATTCGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR-3UTR CAA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTATACATGGATTGCACTaGAATCTGTGCTCTGGTATT +
Preference number: 3 (lower is better)
Translates to: FNNLQSLNPKGPPCASETIHGLH*NLCSGI
Trigger: AATACCAGAGCACAGATTCAAGTGCAATCCATGTAT...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCAGTCTCCTGGGAGGACTaGGCTGCTGAGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: RSHSSSTTRACTGAADTSVSWED*AAEVHP
Trigger: CGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGAC...TGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACT +
Preference number: 4 (lower is better)
Translates to: RTSGPPCRRGSTRSHSSSSTTRA*TGAADT
Trigger: AGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCT...GCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp GTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACT +
Preference number: 4 (lower is better)
Translates to: VVPHADAVPLAATVPAPLSTTRA*TGAADT
Trigger: AGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCT...GAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp AGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTACACGAGCCACTGGGTaGAGGGGGCTCATGCCTGCC +
Preference number: 4 (lower is better)
Translates to: SGPPCRRGSTRSHSSSTTTRATG*RGLMPA
Trigger: GGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGT...AGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CCA 90 bp CTACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACACTCCCGCCGCGTTTCTaGGGTCGTCGCCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LHVEPVVPHADAVPLAATLPPRF*GRRLQL
Trigger: CAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAG...TGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCTCTCTCCCGCCGCGTTTCTaGGGTCGTCGCCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LSMDTSHWVQGAHACHLSLPPRF*GRRLQL
Trigger: CAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAG...AGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCCGAGTCAAGCTCTaGGGCTCCCGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RTSGPPCRRGSTRSHSSSTRVKL*GSRSQP
Trigger: AGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGT...GCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp GCTCCCCCAGGATGTGGCGATGGGGCGCCCGGCCGCCCTGGCTACACGTCGAACAATGAAGGTAGACACTaGGTATGCTCCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: APPGCGDGAPGRPGYTSNNEGRH*VCSPRM
Trigger: CATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT...GTTCGACGTGTAGCCAGGGCGGCCGGGCGCCCCATCGCCACATCCTGGGGGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR TCA 90 bp ACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCGGAGGACTGAGCTGCTaGGGTCCACCCGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: TSNQWSPMQTRFHSQPQFGGLSC*GPPESS
Trigger: GCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCC...GAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp CACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCAGTCTCCTGGGAGGACTaGGCTGCTGAGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: HSSSTTRACTGAADTSCAVSWED*AAEVHP
Trigger: CGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGAC...TGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACT +
Preference number: 4 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQSTTRA*TGAADT
Trigger: AGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCT...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQTSGPP*RRGSTR
Trigger: GCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGT...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCCCAGGAACAGGCCCATaGGCGCAGCGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELPGTGP*AQRRQP
Trigger: CGGCTGGCGCCGCTGCGCGCATGGGCCTGTTCCTGG...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366898.6
CDS-3UTR CCA 90 bp TCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SPMQTRFHSQPQFQHHSSQVTFL*SGSGSS
Trigger: GCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTG...GCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: QAIAPFAGDFPLVRLRQQHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...CTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp CAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTACACGTCGAACCAGTaGTCCCCCATGCAGACGCGG +
Preference number: 4 (lower is better)
Translates to: QWSPMQTRFHSQPQFQHHYTSNQ*SPMQTR
Trigger: CCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA...GTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATACACGTCGAACCAGTaGTCCCCCATGCAGACGCGG +
Preference number: 4 (lower is better)
Translates to: RSHSSSTTRACTGAADTSYTSNQ*SPMQTR
Trigger: CCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA...TGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTCCACACAGCAAGATGGACCCTaGGTCAAGGTGAGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: PFAGDFPLVRLRQQPRSTQQDGP*VKVSVA
Trigger: GGCAACGCTCACCTTGACCCAGGGTCCATCTTGCTG...TGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS-3UTR CCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCTGGTCACTGGGTAGGTaGCGGCTGCGGGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVWSLGR*RLRARN
Trigger: GTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCA...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CCA 90 bp CCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCATGGACACGAGCCACTaGGTGCAGGGGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: PQFQHHSSLHWGCGHFMCMDTSH*VQGAHA
Trigger: GGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCAT...GCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR TCA 90 bp GGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCGGTAGAGTCTCCTGGGAGGACTaGGCTGCTGAGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: GLPVTGLLSPWGHVGVGRVSWED*AAEVHP
Trigger: CGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGAC...TCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCTCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: RTSGPPCRRGSTRSHSSSSRGGS*TGKPGR
Trigger: CCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGA...GCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: QWSPMQTRFHSQPQFQHHSRGGS*TGKPGR
Trigger: CCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGA...GTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CTACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGCTTCCCAACGAGCCTaGTCGGCGGCTCTTTCATCG +
Preference number: 4 (lower is better)
Translates to: LHVEPVVPHADAVPLAATASQRA*SAALSS
Trigger: CGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGC...TGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCAACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: HSSSTTRACTGAADTSCATSGPP*RRGSTR
Trigger: GCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGT...TGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp ACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCGGTCAAGGTGAGCGTTaGCTGCCTGCAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSNQWSPMQTRFHSQPQFGQGER*LPAGAA
Trigger: TGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACC...GAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGGGTCAAGGTGAGCGTTaGCTGCCTGCAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMGQGER*LPAGAA
Trigger: TGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACC...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTATGGGTAGGTGGCGGCTaGGGGCCAGGAACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVWVGGG*GPGTGP
Trigger: TGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCA...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR GCA 90 bp CTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCTCTGGGGAACCCCTGGTATaGAGAGCTCCCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: LSMDTSHWVQGAHACHLSGEPLV*RAPWDL
Trigger: CAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCC...AGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGGGGGAACCCCTGGTATaGAGAGCTCCCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQGEPLV*RAPWDL
Trigger: CAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCC...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGGATCCTAGGGTGCCTGAGCTCATGGGAGCAAACCTTGTTCAGGCACCGCAACTCCCGCCGCGTTTCTaGGGTCGTCGCCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: GDPRVPELMGANLVQAPQLPPRF*GRRLQL
Trigger: CAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAG...TTGCGGTGCCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCCTAGGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCAACCCGAGTCAAGCTCTaGGGCTCCCGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: HSSSTTRACTGAADTSCATRVKL*GSRSQP
Trigger: AGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGT...TGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGGCAGTGTGGGGATTaGCATTCACCACTCATCCGG +
Preference number: 4 (lower is better)
Translates to: PQPRPLPPSQVTFLWSGSGQCGD*HSPLIR
Trigger: CCGGATGAGTGGTGAATGCCAATCCCCACACTGCCC...GGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp GTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGGGGCAGTGTGGGGATTaGCATTCACCACTCATCCGG +
Preference number: 4 (lower is better)
Translates to: VPHADAVPLAATVPAPLEGQCGD*HSPLIR
Trigger: CCGGATGAGTGGTGAATGCCAATCCCCACACTGCCC...CTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CTACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACATGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LHVEPVVPHADAVPLAATWRELH*KTRTGL
Trigger: GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCA...TGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp TTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGCCTTTTCCACTGGTACATaGCAGCGGGGACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FAGDFPLVRLRQQPRSTAFSTGT*QRGQGL
Trigger: CAAGCCCTGTCCCCGCTGCCATGTACCAGTGGAAAA...GGCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp CCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTCCACATTTTCCACTGGTACATaGCAGCGGGGACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PFAGDFPLVRLRQQPRSTFSTGT*QRGQGL
Trigger: CAAGCCCTGTCCCCGCTGCCATGTACCAGTGGAAAA...TGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGCACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTCAGCAAGATGGACCCTaGGTCAAGGTGAGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: PHADAVPLAATVPAPLEPQQDGP*VKVSVA
Trigger: GGCAACGCTCACCTTGACCCAGGGTCCATCTTGCTG...AGGCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp GCTCCCCCAGGATGTGGCGATGGGGCGCCCGGCCGCCCTGGCTACACGTCGAACCAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: APPGCGDGAPGRPGYTSNQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...GTTCGACGTGTAGCCAGGGCGGCCGGGCGCCCCATCGCCACATCCTGGGGGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR TCA 90 bp CCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCTGCTGCACTGTACCCTaGGTTTTCCCGGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: PQFQHHSSLHWGCGHFMCCCTVP*VFPAAL
Trigger: GAGTGCAGCCGGGAAAACTCAGGGTACAGTGCAGCA...GCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp GTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGTGCATGCAGCCTCCTaGGTAGTTGTTCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VVPHADAVPLAATVPAPLVHAAS*VVVPEA
Trigger: AGCCTCAGGAACAACTACTCAGGAGGCTGCATGCAC...GAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479615.5
CDS-3UTR GCA 90 bp GGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGGTTTCTTTGGAGGCTaGTTCCCAACGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPPCRRGSTRSHSSSTTRGFFGG*FPTSLL
Trigger: GAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAACC...TCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAAAGGTGAGCGTTGCCTaGCTGCAGGTGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: LHVEPVVPHADAVPLAATKVSVA*LQVLHC
Trigger: ACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTT...TGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp TCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGCCAAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SQVTFLWSGSGSSPAPQPKITRN*SAGTPC
Trigger: ACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTT...TGGCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGGGGCAGTGTGGGGATTaGCATTCACCACTCATCCGG +
Preference number: 4 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMGQCGD*HSPLIR
Trigger: CCGGATGAGTGGTGAATGCCAATCCCCACACTGCCC...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGGGGCAGTGTGGGGATTaGCATTCACCACTCATCCGG +
Preference number: 4 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQGQCGD*HSPLIR
Trigger: CCGGATGAGTGGTGAATGCCAATCCCCACACTGCCC...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCATGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: HSSSTTRACTGAADTSCAWRELH*KTRTGL
Trigger: GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCA...TGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCCAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVQVTFL*SGSGSS
Trigger: GCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTG...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTGGTCTGGACTCAGTATaGACACGAGCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SGPPCRRGSTRSHSSSTTGLDSV*TRATGC
Trigger: GCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACC...AGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR TCA 90 bp GTACGCTTCTTTACATTCCCGGCAGAAGGCAAACCCACAGCCCAGGCCATTGCCGGAGGACTGAGCTGCTaGGGTCCACCCGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: VRFFTFPAEGKPTAQAIAGGLSC*GPPESS
Trigger: GCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCC...GGCAATGGCCTGGGCTGTGGGTTTGCCTTCTGCCGGGAATGTAAAGAAGCGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR TCA 90 bp GGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGCACTTCCAGCTGGTGGTaGGTCCTTCCTGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: GGCFPTSLLGGSFIDSVGTSSWW*VLPAVS
Trigger: ACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGT...GCCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000673871.1
CDS-3UTR TCA 90 bp GCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGACTTCCAGCTGGTGGTaGGTCCTTCCTGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: ATVPAPLEPALGLRTLHVTSSWW*VLPAVS
Trigger: ACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGT...CACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGATGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRCPLRR*LSSGQA
Trigger: AGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCA...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACATTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LHVEPVVPHADAVPLAATFLLSV*RMTASP
Trigger: GGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAA...TGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp ACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCTTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: TSNQWSPMQTRFHSQPQFFLLSV*RMTASP
Trigger: GGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAA...GAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp GGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGCCAGGACACACTCCTCTaGACCATACTGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: GGCFPTSLLGGSFIDSVGQDTLL*TILLVP
Trigger: CGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTG...GCCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCAAGGTGAGCGTTGCCTaGCTGCAGGTGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVKVSVA*LQVLHC
Trigger: ACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTT...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTCCAGGAACAGGCCCATaGGCGCAGCGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGPGTGP*AQRRQP
Trigger: CGGCTGGCGCCGCTGCGCGCATGGGCCTGTTCCTGG...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CCA 90 bp TTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LPPSQVTFLWSGSGSSPARIDLH*ETMAGV
Trigger: AACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCT...AGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp GTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VPHADAVPLAATVPAPLEKITRN*SAGTPC
Trigger: ACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTT...CTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGCCAGCCACACAAGGCAGGGAGTAGCCAAGTTGAGGGTCGTGAACAAACTGCCACCCGAGTCAAGCTCTaGGGCTCCCGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: SQPHKAGSSQVEGREQTATRVKL*GSRSQP
Trigger: AGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGT...GGCAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTGCCTTGTGTGGCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR CCA 90 bp ACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCTTTTCCACTGGTACATaGCAGCGGGGACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: TSNQWSPMQTRFHSQPQFFSTGT*QRGQGL
Trigger: CAAGCCCTGTCCCCGCTGCCATGTACCAGTGGAAAA...GAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAAGGCGCCCGGCCGCCCTaGCTACACGTCGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELEGARPP*LHVEPV
Trigger: CACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCC...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCGCTGAGAACGCCTGTTaGTGGTGTCGCAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVAENAC*WCRRWL
Trigger: GAGCCATCTGCGACACCACCAACAGGCGTTCTCAGC...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CAA 72 bp GGGATCCTAGGGTGCCTGAGCTCATGGGAGCAAACCTaGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: GILGCLSSWEQT*FRHRKPNAACR
Trigger: TCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCCTAGGATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCTGTCAGTGTGCAGAATaGCAGCCAGCCCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVCQCAE*QPAPQS
Trigger: ACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACA...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCATGTCAGTGTGCAGAATaGCAGCCAGCCCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: HSSSTTRACTGAADTSCACQCAE*QPAPQS
Trigger: ACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACA...TGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGAAGGCAAATGCCAATGTGTCCACGCTGCTCCTCAGGCAAGCCATTCTCCCCGGTCAAGGTGAGCGTTaGCTGCCTGCAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: QKANANVSTLLLRQAILPGQGER*LPAGAA
Trigger: TGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACC...GGGGAGAATGGCTTGCCTGAGGAGCAGCGTGGACACATTGGCATTTGCCTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CCA 90 bp GGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: GPPCRRGSTRSHSSSTTRRIDLH*ETMAGV
Trigger: AACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCT...TCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTATGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVWRELH*KTRTGL
Trigger: GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCA...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSQVTFL*SGSGSS
Trigger: GCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTG...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGACAGCAAGATGGACCCTaGGTCAAGGTGAGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRQQDGP*VKVSVA
Trigger: GGCAACGCTCACCTTGACCCAGGGTCCATCTTGCTG...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCTCTATCATCCCAGCAAGATaGACCCTGGGTCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LSMDTSHWVQGAHACHLSIIPAR*TLGQGE
Trigger: CTCACCTTGACCCAGGGTCCATCTTGCTGGGATGAT...AGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp ACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCATCATCCCAGCAAGATaGACCCTGGGTCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: TSNQWSPMQTRFHSQPQFIIPAR*TLGQGE
Trigger: CTCACCTTGACCCAGGGTCCATCTTGCTGGGATGAT...GAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CTACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAATCATCCCAGCAAGATaGACCCTGGGTCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LHVEPVVPHADAVPLAATIIPAR*TLGQGE
Trigger: CTCACCTTGACCCAGGGTCCATCTTGCTGGGATGAT...TGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAGGCGCCCGGCCGCCCTaGCTACACGTCGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRGARPP*LHVEPV
Trigger: CACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCC...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGAACGCCTGTTGGTaGTGTCGCAGATGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRENACW*CRRWLC
Trigger: GCAGAGCCATCTGCGACACCACCAACAGGCGTTCTC...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCATGGACACGAGCCACTaGGTGCAGGGGGCTCATGCC +
Preference number: 4 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELMDTSH*VQGAHA
Trigger: GGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCAT...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAACTTCCAGCTGGTGGTaGGTCCTTCCTGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRTSSWW*VLPAVS
Trigger: ACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGT...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GGGGATCCTAGGGTGCCTGAGCTCATGGGAGCAAACCTTGTTCAGGCACCGCAAACTTCCAGCTGGTGGTaGGTCCTTCCTGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: GDPRVPELMGANLVQAPQTSSWW*VLPAVS
Trigger: ACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGT...TTGCGGTGCCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCCTAGGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCACTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACT +
Preference number: 4 (lower is better)
Translates to: RSHSSSTTRACTGAADTSLSSCS*GFKYGT
Trigger: AGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAG...TGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCAGCACAATGTGAACAATaGTCTGCTGATCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RSHSSSTTRACTGAADTSAQCEQ*SADPGH
Trigger: GTGACCTGGATCAGCAGAGCATTGTTCACATTGTGC...TGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACAATGTGAACAATaGTCTGCTGATCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: PHADAVPLAATVPAPLEPAQCEQ*SADPGH
Trigger: GTGACCTGGATCAGCAGAGCATTGTTCACATTGTGC...AGGCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: PFAGDFPLVRLRQQPRSTVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...TGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGCTTCAAATACGGCACTaGACTCCCCTTCATGGTACG +
Preference number: 4 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMLQIRH*TPLHGT
Trigger: CGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCGCTTCCCAACGAGCCTaGTCGGCGGCTCTTTCATCG +
Preference number: 4 (lower is better)
Translates to: HRKPNAACRLGRRNNANTASQRA*SAALSS
Trigger: CGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGC...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTGCTGGTACCGGTTGTACTGCTCTTCTCCCAGAATCCTGAAGTGATGGAGCTCACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: LLVPVVLLFSQNPEVMELTSGPP*RRGSTR
Trigger: GCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGT...GAGCTCCATCACTTCAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSTSGPP*RRGSTR
Trigger: GCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGT...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCAGCCATTCTCCCCAGTaGACAGATGAGGAAATCGGG +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVSHSPQ*TDEEIG
Trigger: CCCGATTTCCTCATCTGTGCACTGGGGAGAATGGCT...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CCA 90 bp AACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: NQWSPMQTRFHSQPQFQHTTSLS*KMLVSE
Trigger: TTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGT...GTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVKITRN*SAGTPC
Trigger: ACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTT...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTCTGCACTAGTCCCAGGGCAGTGTGGGGATTGGCATTCACCACTCATCCGGTTTGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FCTSPRAVWGLAFTTHPVWRELH*KTRTGL
Trigger: GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCA...AACCGGATGAGTGGTGAATGCCAATCCCCACACTGCCCTGGGACTAGTGCAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp GTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: VVPHADAVPLAATVPAPLSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...GAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp TCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTGCACTCCCCTTCATaGTACGCTTCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: SPMQTRFHSQPQFQHHSSLHSPS*YASLHS
Trigger: GGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAG...GCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTGCTGAGAACGCCTGTTaGTGGTGTCGCAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSAENAC*WCRRWL
Trigger: GAGCCATCTGCGACACCACCAACAGGCGTTCTCAGC...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCCTGGGACTTGCAGATTaGACAGAGAGGGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVLGLAD*TERVCQ
Trigger: TTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAG...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCGGAGGACTGAGCTGCTaGGGTCCACCCGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACGGLSC*GPPESS
Trigger: GCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCC...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GGCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGGAGGACTGAGCTGCTaGGGTCCACCCGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GFKYGTALPFMVRFFTFPGGLSC*GPPESS
Trigger: GCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCC...CGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000673871.1
CDS-3UTR TCA 90 bp ACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: TSNQWSPMQTRFHSQPQFQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...GAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp CCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCAAAGCTGTTGTAGATTaGTCTACCTGCTGCACAGTC +
Preference number: 4 (lower is better)
Translates to: PTAQAIAPFAGDFPLVRLKAVVD*STCCTV
Trigger: GACTGTGCAGCAGGTAGATCAATCTACAACAGCTTT...GAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS-3UTR TCA 90 bp GAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGCCGGTGCAGGGCCTCTaGGACGACGGGACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: EMGYLRQLGKEGQVSQDVPVQGL*DDGTVL
Trigger: GAGGACAGTCCCGTCGTCTCAGAGGCCCTGCACCGG...CACATCCTGGGACACCTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGTCCACCATTTCTATGTaGGCTTTGGGCTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: ATVPAPLEPALGLRTLHVSTISM*ALGFLS
Trigger: TGACAGGAAGCCCAAAGCTCACATAGAAATGGTGGA...CACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACGTCGTCGCCTCCAGTTaGATTCATTTCTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: QWSPMQTRFHSQPQFQHHVVASS*IHFLTF
Trigger: AAAGGTCAAGAAATGAATGCAACTGGAGGCGACGAC...GTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp GTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGTCGTCGCCTCCAGTTaGATTCATTTCTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: VVPHADAVPLAATVPAPLVVASS*IHFLTF
Trigger: AAAGGTCAAGAAATGAATGCAACTGGAGGCGACGAC...GAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: QAIAPFAGDFPLVRLRQQVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...CTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp GTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: VPHADAVPLAATVPAPLEVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...CTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CTGCTGGTACCGGTTGTACTGCTCTTCTCCCAGAATCCTGAAGTGATGGAGCTCGCTTCCCAACGAGCCTaGTCGGCGGCTCTTTCATCG +
Preference number: 4 (lower is better)
Translates to: LLVPVVLLFSQNPEVMELASQRA*SAALSS
Trigger: CGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGC...GAGCTCCATCACTTCAGGATTCTGGGAGAAGAGCAGTACAACCGGTACCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTAGGTTTCTTTGGAGGCTaGTTCCCAACGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVGFFGG*FPTSLL
Trigger: GAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAACC...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACT +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACSTTRA*TGAADT
Trigger: AGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCT...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACT +
Preference number: 4 (lower is better)
Translates to: GAMLESVDFQTVKPHEAVSTTRA*TGAADT
Trigger: AGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCT...CACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACTSGPP*RRGSTR
Trigger: GCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGT...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGGAGCTCCCTGGGACTTaGAGATTGGACAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRELPGT*RLDREG
Trigger: ACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTC...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGGACACTTCATGTGCATaGAGCCTCCTGAGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMDTSCA*SLLSSC
Trigger: ACAACTACTCAGGAGGCTGCATGCACATGAAGTGTC...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479615.5
CDS-3UTR CCA 90 bp TGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGTCCACTGGGAAACCATaGCTGGAGTTGAACCTGACA +
Preference number: 4 (lower is better)
Translates to: WRLLPNEPARRLFHRLCRSTGKP*LELNLT
Trigger: TGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGA...CCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTCTCCCGCCGCGTTTCTaGGGTCGTCGCCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESLPPRF*GRRLQL
Trigger: CAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAG...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: SGPPCRRGSTRSHSSSTTSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...AGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCCACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTTTCTTTGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTTGGTGGTGTCGCAGATaGCTCTGCTGTCTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VSLEAASQRACSAALSSTWWCRR*LCCLVW
Trigger: CCACACAAGACAGCAGAGCCATCTGCGACACCACCA...AGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTCTCCTGGGGAACCCCTaGTATGCAGAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPLLGNP*YAELPG
Trigger: CCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACGTTGCATTCATTTCTTaGCCTTTTCTCCACGGTCTC +
Preference number: 4 (lower is better)
Translates to: NQWSPMQTRFHSQPQFQHVAFIS*PFLHGL
Trigger: GAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAAC...GTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp CAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACCAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: QWSPMQTRFHSQPQFQHHQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...GTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp CAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGATGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QIRHCTPLHGTLLYIPGRCPLRR*LSSGQA
Trigger: AGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCA...TCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR TCA 90 bp TCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGGTGTCATCCGGAGGCTaGGAACGCCTGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SNTALHSPSWYASLHSRQVSSGG*ERLLVV
Trigger: CACCACCAACAGGCGTTCTCAGCCTCCGGATGACAC...CTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR TCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCTCTCTCTCCAGCTACTaGTTCTGCCTGTCTCGAATT +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVSLSSY*FCLSRI
Trigger: AATTCGAGACAGGCAGAATCAGTAGCTGGAGAGAGA...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAAGGCAAGGGTATAAACCCTTCTaGTGGAGAGAGTCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RHCTPLHGTLLYIPGRRQGYKPF*WRESGV
Trigger: CACGCCCGACTCTCTCCATCAGAAGGGTTTATACCC...TTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR TCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAACAGAAGGGAGCCACCTaGTTTGTCGCATCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELEQKGAT*FVASGQ
Trigger: CTGGCCCGATGCGACAAATCAGGTGGCTCCCTTCTG...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCGCACAATGTGAACAATaGTCTGCTGATCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVAQCEQ*SADPGH
Trigger: GTGACCTGGATCAGCAGAGCATTGTTCACATTGTGC...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VVPHADAVPLAATVPAPLVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...GAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTTTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: PHADAVPLAATVPAPLEPFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...AGGCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCCAGGACACACTCCTCTaGACCATACTGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: HRKPNAACRLGRRNNANTQDTLL*TILLVP
Trigger: CGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTG...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCGGTTTCTTTGGAGGCTaGTTCCCAACGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HRKPNAACRLGRRNNANTGFFGG*FPTSLL
Trigger: GAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAACC...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGTSGPP*RRGSTR
Trigger: GCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGT...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CACACTCCTCTGCACCATACTGCTGGTACCGGTTGTACTGCTCTTCTCCCAGAAAAGGTGAGCGTTGCCTaGCTGCAGGTGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: HTPLHHTAGTGCTALLPEKVSVA*LQVLHC
Trigger: ACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTT...TTCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS-3UTR GCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATACCAGGAACAGGCCCATaGGCGCAGCGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIPGTGP*AQRRQP
Trigger: CGGCTGGCGCCGCTGCGCGCATGGGCCTGTTCCTGG...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGATGGACAGAGAGGGTGTaGCAAAGGGGTATAAACCCT +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRWTERV*QRGINP
Trigger: AGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCA...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAAGGGGAACCCCTGGTATaGAGAGCTCCCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELEGEPLV*RAPWDL
Trigger: CAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCC...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGATCCACTGGGAAACCATaGCTGGAGTTGAACCTGACA +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRSTGKP*LELNLT
Trigger: TGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGA...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATTCTGCACTAGTCCCAGGGCACTCCCGCCGCGTTTCTaGGGTCGTCGCCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: RGGVCSTFKEKFCTSPRALPPRF*GRRLQL
Trigger: CAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAG...TGCCCTGGGACTAGTGCAGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR CCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTACCCGAGTCAAGCTCTaGGGCTCCCGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESTRVKL*GSRSQP
Trigger: AGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGT...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAACCCGAGTCAAGCTCTaGGGCTCCCGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRTRVKL*GSRSQP
Trigger: AGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGT...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: WRLLPNEPARRLFHRLCRSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...CCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGACAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QIRHCTPLHGTLLYIPGRQVTFL*SGSGSS
Trigger: GCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTG...TCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGACACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: QIRHCTPLHGTLLYIPGRHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...TCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAACACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELEHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTCACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCTGGGACTTGCAGATTaGACAGAGAGGGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRLGLAD*TERVCQ
Trigger: TTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAG...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTAGTATGCAGAGCTCCCTaGGACTTGCAGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVVCRAP*DLQIGQ
Trigger: CTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATAC...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTCTCCTGGGGAACCCCTaGTATGCAGAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGLLGNP*YAELPG
Trigger: CCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTCTCCTGGGGAACCCCTaGTATGCAGAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESLLGNP*YAELPG
Trigger: CCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGACTCTTCTGCGTAGTGTaGGTAAGAGCATGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRLFCVV*VRACGL
Trigger: CAAACCGCATGCTCTTACCCACACTACGCAGAAGAG...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCGGTCTGTTGTCACCGTaGGGCCATGTTGGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSGLLSP*GHVGVG
Trigger: ACCGACTCCAACATGGCCCCACGGTGACAACAGACC...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 72 bp GGGACAGCCAGCCACACAAGGCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTGCCGATCATTGAGTCT +
Preference number: 4 (lower is better)
Translates to: GTASHTRQGVAK*RVVNKLPIIES
Trigger: AGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTGCCTTGTGTGGCTGGCTGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAGTCTCCTGGGAGGACTaGGCTGCTGAGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKVSWED*AAEVHP
Trigger: CGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGAC...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCACTTCCAGCTGGTGGTaGGTCCTTCCTGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSTSSWW*VLPAVS
Trigger: ACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGT...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: SGPPCRRGSTRSHSSSTTQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...AGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp TCAGGTGCAAAGCTACTGATGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACATTTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SGAKLLMFPCQRWGVLHICPLRR*LSSGQA
Trigger: AGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCA...AATGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp GCGGGAGTTGCACTGGAAAACCAGGACGGGGCTCCTGACGTCTGTGCACGTAATCTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACT +
Preference number: 4 (lower is better)
Translates to: AGVALENQDGAPDVCARNLSSCS*GFKYGT
Trigger: AGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAG...ATTACGTGCACAGACGTCAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTTGCTGCACTGTACCCTaGGTTTTCCCGGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPCCTVP*VFPAAL
Trigger: GAGTGCAGCCGGGAAAACTCAGGGTACAGTGCAGCA...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCAAAAGCTGTTGTAGATTaGTCTACCTGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: HSSSTTRACTGAADTSCAKAVVD*STCWTS
Trigger: GGAAGTCCAGCAGGTAGATCAATCTACAACAGCTTT...TGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479615.5
ENST00000673871.1
CDS-3UTR TCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCGGGTATAAACCCTTCTaGTGGAGAGAGTCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSGYKPF*WRESGV
Trigger: CACGCCCGACTCTCTCCATCAGAAGGGTTTATACCC...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAAGGATGTGGAAAACTTaGGTTCATCCCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRRMWKT*VHPLSS
Trigger: GGAAGAGAGGGGATGAACTCAAGTTTTCCACATCCT...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCTTTAAAGAAAAATTCTaGACTAGTCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: RTSGPPCRRGSTRSHSSSFKEKF*TSPRAV
Trigger: CACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAA...GCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp AGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTTTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: SGPPCRRGSTRSHSSSTTFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...AGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp AAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAAGCTTCCCAACGAGCCTaGTCGGCGGCTCTTTCATCG +
Preference number: 4 (lower is better)
Translates to: KYGTALPFMVRFFTFPAEASQRA*SAALSS
Trigger: CGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGC...TTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGTTTGACAGGGGCCTTTaGAATACACATAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VPHADAVPLAATVPAPLEFDRGL*NTHKSC
Trigger: ACAGCTTTTATGTGTATTGCAAAGGCCCCTGTCAAA...CTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAAAAGGTGAGCGTTGCCTaGCTGCAGGTGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELEKVSVA*LQVLHC
Trigger: ACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTT...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCACCAGGAACAGGCCCATaGGCGCAGCGGCGCCAGCCG +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSPGTGP*AQRRQP
Trigger: CGGCTGGCGCCGCTGCGCGCATGGGCCTGTTCCTGG...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR GCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTGGTAGACACTGGGTATaGTCCCCCAGGATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPGRHWV*SPRMWR
Trigger: TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACC...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCGGTAGACACTGGGTATaGTCCCCCAGGATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACGRHWV*SPRMWR
Trigger: TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACC...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCGTGTGGGTAAGAGCATaGGGTTTGCCGCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSVWVRA*GLPHAV
Trigger: CACTGCATGCGGCAAACCGCATGCTCTTACCCACAC...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTACGCTTCTTTACATTCCCGGCAGAAGGCAAACCCACAGCCCAGGCCATTGCCACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: VRFFTFPAEGKPTAQAIATTSLS*KMLVSE
Trigger: TTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGT...GGCAATGGCCTGGGCTGTGGGTTTGCCTTCTGCCGGGAATGTAAAGAAGCGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp GAGCTCTTTAATCAAGGAGTTGGGACAGCCAGCCACACAAGGCAGGGAGTAGCCAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ELFNQGVGTASHTRQGVAKITRN*SAGTPC
Trigger: ACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTT...GGCTACTCCCTGCCTTGTGTGGCTGGCTGTCCCAACTCCTTGATTAAAGAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGWRELH*KTRTGL
Trigger: GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTCAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESQVTFL*SGSGSS
Trigger: GCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTG...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCGGTAGACTGCACTCCCCTTCATaGTACGCTTCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: GLPVTGLLSPWGHVGVGRLHSPS*YASLHS
Trigger: GGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAG...TCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCTCTTCTGCGTAGTGTaGGTAAGAGCATGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRLFCVV*VRACGL
Trigger: CAAACCGCATGCTCTTACCCACACTACGCAGAAGAG...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATGGAGGACTGAGCTGCTaGGGTCCACCCGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNGGLSC*GPPESS
Trigger: GCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCC...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CAAGTGATGTTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCGTCTCCTGGGAGGACTaGGCTGCTGAGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: QVMFRLFVAIRCKATDVSVSWED*AAEVHP
Trigger: CGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGAC...GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACATCACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR TCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GCTCCTGACGTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTGCGATTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: APDVCARNASDVPTICCDCPLRR*LSSGQA
Trigger: AGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCA...ATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTGCTGCACTGTACCCTaGGTTTTCCCGGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGCCTVP*VFPAAL
Trigger: GAGTGCAGCCGGGAAAACTCAGGGTACAGTGCAGCA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGTCTCTCTCCAGCTACTaGTTCTGCCTGTCTCGAATT +
Preference number: 4 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRSLSSY*FCLSRI
Trigger: AATTCGAGACAGGCAGAATCAGTAGCTGGAGAGAGA...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGGGGTATAAACCCTTCTaGTGGAGAGAGTCGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GAMLESVDFQTVKPHEAVGYKPF*WRESGV
Trigger: CACGCCCGACTCTCTCCATCAGAAGGGTTTATACCC...CACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGTGTTGTTAATCTTTTaGTTGTGTTGTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: GPPCRRGSTRSHSSSTTRVLLIF*LCCEWL
Trigger: CAGCCATTCACAACACAATCAAAAGATTAACAACAC...TCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR TCA 90 bp CAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGGAAAACTTGAGTTCATCCCAGAAGGGAGCCACCTaGTTTGTCGCATCGGGCCAG +
Preference number: 4 (lower is better)
Translates to: QLGKEGQVSQDVENLSSSQKGAT*FVASGQ
Trigger: CTGGCCCGATGCGACAAATCAGGTGGCTCCCTTCTG...GGATGAACTCAAGTTTTCCACATCCTGGGACACCTGTCCCTCTTTTCCTAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAATCCCCAGTGCACAGATaGGGAAATCGGGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KYGTALPFMVRFFTFPAESPVHR*GNRGSE
Trigger: CTCAGAGCCCCGATTTCCTCATCTGTGCACTGGGGA...TTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR GCA 90 bp GGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCGGTAGAGTCGTCGCCTCCAGTTaGATTCATTTCTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: GLPVTGLLSPWGHVGVGRVVASS*IHFLTF
Trigger: AAAGGTCAAGAAATGAATGCAACTGGAGGCGACGAC...TCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAATTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELEFLLSV*RMTASP
Trigger: GGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAA...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GGCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGTTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GFKYGTALPFMVRFFTFPFLLSV*RMTASP
Trigger: GGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAA...CGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCTCCTCTGCACCATACTaGTGGTACCGGTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSSSAPY*WYRLYC
Trigger: GCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGA...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAGGTTTCTTTGGAGGCTaGTTCCCAACGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QIRHCTPLHGTLLYIPGRGFFGG*FPTSLL
Trigger: GAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAACC...TCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TGCTCCACATTTAAAGAAAAATTCTGCACTAGTCCCAGGGCAGTGTGGGGATTGACCAGTGGTCCCCCATaGAGACGCGGTTCCACTCGC +
Preference number: 4 (lower is better)
Translates to: CSTFKEKFCTSPRAVWGLTSGPP*RRGSTR
Trigger: GCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGT...CAATCCCCACACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAATGTGGAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTGAGCTCCCTGGGACTTaGAGATTGGACAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPELPGT*RLDREG
Trigger: ACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTC...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCCCAATGTGTCCACGCTaGTCCTCAGGCAAGCCATTC +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACPMCPR*SSGKPF
Trigger: GAATGGCTTGCCTGAGGAGCAGCGTGGACACATTGG...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCCCGGCAGAAGGCAAATaGCAATGTGTCCACGCTGCT +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACPAEGK*QCVHAA
Trigger: AGCAGCGTGGACACATTGGCATTTGCCTTCTGCCGG...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CCA 90 bp TGGTACGCTTCTTTACATTCCCGGCAGAAGGCAAACCCACAGCCCAGGCCATTGTCCACTGGGAAACCATaGCTGGAGTTGAACCTGACA +
Preference number: 4 (lower is better)
Translates to: WYASLHSRQKANPQPRPLSTGKP*LELNLT
Trigger: TGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGA...CAATGGCCTGGGCTGTGGGTTTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp GCCAAGTTGAGGGTCGTGAACAAACTGCCGATCATTGAGTCTTGTCACACAGTATGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: AKLRVVNKLPIIESCHTVWRELH*KTRTGL
Trigger: GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCA...TACTGTGTGACAAGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp CGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: RTSGPPCRRGSTRSHSSSVTQYK*KQSKQI
Trigger: GATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC...GCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGCTCTTTAATCAAGGAGTTGGGACAGCCAGCCACACAAGGCAGGGAGTAGCCTCTGCACCATACTGCTaGTACCGGTTGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: ELFNQGVGTASHTRQGVASAPYC*YRLYCS
Trigger: AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGA...GGCTACTCCCTGCCTTGTGTGGCTGGCTGTCCCAACTCCTTGATTAAAGAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTACTGCACTCCCCTTCATaGTACGCTTCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVLHSPS*YASLHS
Trigger: GGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAG...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGCACTCGAGCCTGCACTaGGGCTGCGGACACTTCATG +
Preference number: 4 (lower is better)
Translates to: EMGYLRQLGKEGQVSQDVHSSLH*GCGHFM
Trigger: CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTG...CACATCCTGGGACACCTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GCTCCTGACGTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTGCGATTACACGTCGAACCAGTaGTCCCCCATGCAGACGCGG +
Preference number: 4 (lower is better)
Translates to: APDVCARNASDVPTICCDYTSNQ*SPMQTR
Trigger: CCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA...ATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp GTCACACAGTATAAGTGGAAACAGTCTAAGCAAATCACGTGGCGGGAGTTGCACTACACGTCGAACCAGTaGTCCCCCATGCAGACGCGG +
Preference number: 4 (lower is better)
Translates to: VTQYKWKQSKQITWRELHYTSNQ*SPMQTR
Trigger: CCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA...GTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGATACACGTCGAACCAGTaGTCCCCCATGCAGACGCGG +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRYTSNQ*SPMQTR
Trigger: CCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGTGGTCACTGGGTAGGTaGCGGCTGCGGGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEWSLGR*RLRARN
Trigger: GTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCA...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAGGCGCCCGGCCGCCCTaGCTACACGTCGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSGARPP*LHVEPV
Trigger: CACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCC...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTTGGTGGTGTCGCAGATaGCTCTGCTGTCTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPWWCRR*LCCLVW
Trigger: CCACACAAGACAGCAGAGCCATCTGCGACACCACCA...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTGGTCTGTTGTCACCGTaGGGCCATGTTGGAGTCGGT +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESGLLSP*GHVGVG
Trigger: ACCGACTCCAACATGGCCCCACGGTGACAACAGACC...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTGGGTGCCTGAGCTCATaGGAGCAAACCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPGCLSS*EQTLFR
Trigger: CCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCC...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 72 bp ACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCTaGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TPVGGVADGSAV*CGQTERDSGAS
Trigger: AGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGACAGCAGAGCCATCTGCGACACCACCAACAGGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
3UTR CAA 72 bp TTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATaGGGAAGGCGCAATAATGCAAACACCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LFRHRKPNAACR*GRRNNANTIRK
Trigger: CTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTGTCAGTGTGCAGAATaGCAGCCAGCCCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGCQCAE*QPAPQS
Trigger: ACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTACCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVPRILK*WSSLIK
Trigger: CTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGG...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GCCAAGTTGAGGGTCGTGAACAAACTGCCGATCATTGAGTCTTGTCACACAGTATGCTGCACTGTACCCTaGGTTTTCCCGGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: AKLRVVNKLPIIESCHTVCCTVP*VFPAAL
Trigger: GAGTGCAGCCGGGAAAACTCAGGGTACAGTGCAGCA...TACTGTGTGACAAGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS-3UTR TCA 90 bp CAGAAGGCAAATGCCAATGTGTCCACGCTGCTCCTCAGGCAAGCCATTCTCCCCAAAGCTGTTGTAGATTaGTCTACCTGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: QKANANVSTLLLRQAILPKAVVD*STCWTS
Trigger: GGAAGTCCAGCAGGTAGATCAATCTACAACAGCTTT...GGGGAGAATGGCTTGCCTGAGGAGCAGCGTGGACACATTGGCATTTGCCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR GCA 90 bp GCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGTCCTCTGCACCATACTaGTGGTACCGGTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: ASNTALHSPSWYASLHSRSSAPY*WYRLYC
Trigger: GCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGA...CCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAATCCTCTGCACCATACTaGTGGTACCGGTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELESSAPY*WYRLYC
Trigger: GCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGA...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AAGGCAAACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTTTGACAGGGGCCTTTaGAATACACATAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KANPQPRPLPPSQVTFLWFDRGL*NTHKSC
Trigger: ACAGCTTTTATGTGTATTGCAAAGGCCCCTGTCAAA...CCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS-3UTR GCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAGGTCAAGGTGAGCGTTaGCTGCCTGCAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKGQGER*LPAGAA
Trigger: TGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACC...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTGGGTAGGTGGCGGCTaGGGGCCAGGAACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDWVGGG*GPGTGP
Trigger: TGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR GCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGATCCAGGAGTTTCTTCTaGAATTTGGCTGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRSRSFF*NLAVVG
Trigger: TCCAACTACAGCCAAATTGCAGAAGAAACTCCTGGA...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCGTTTGGAGAACCCACTaGAGTTCATTTTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVVWRTH*SSFYRE
Trigger: TTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAAC...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GGCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGAAGCCCAACGCAGCATaGAGATTGGGAAGGCGCAAT +
Preference number: 4 (lower is better)
Translates to: GFKYGTALPFMVRFFTFPKPNAA*RLGRRN
Trigger: ATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTT...CGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CCA 90 bp CACGTGGCGGGAGTTGCACTGGAAAACCAGGACGGGGCTCCTGACGTCTGTGCAGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: HVAGVALENQDGAPDVCAVTQYK*KQSKQI
Trigger: GATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC...TGCACAGACGTCAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAATACACGTCGAACCAGTaGTCCCCCATGCAGACGCGG +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKYTSNQ*SPMQTR
Trigger: CCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTGGTGGTGTCGCAGATaGCTCTGCTGTCTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGWWCRR*LCCLVW
Trigger: CCACACAAGACAGCAGAGCCATCTGCGACACCACCA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGAGAGAACGCCTGTTGGTaGTGTCGCAGATGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRENACW*CRRWLC
Trigger: GCAGAGCCATCTGCGACACCACCAACAGGCGTTCTC...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGGCTGAGAACGCCTGTTaGTGGTGTCGCAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: EMGYLRQLGKEGQVSQDVAENAC*WCRRWL
Trigger: GAGCCATCTGCGACACCACCAACAGGCGTTCTCAGC...CACATCCTGGGACACCTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTGCCATGAATCTAGTTTaGAGAACCCACTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: ELWASCHRSVVTVGPCWSAMNLV*RTHCSS
Trigger: TGAACTGCAGTGGGTTCTCCAAACTAGATTCATGGC...ACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTAGAGAAGGTCTCTCCTaGGGAACCCCTGGTATGCAG +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGREGLS*GTPGMQ
Trigger: CTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCT...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAAGAGAAGGTCTCTCCTaGGGAACCCCTGGTATGCAG +
Preference number: 4 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRREGLS*GTPGMQ
Trigger: CTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCT...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTGGGTGCCTGAGCTCATaGGAGCAAACCTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGGCLSS*EQTLFR
Trigger: CCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCC...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCATCACTGTTCTATTCTaGAAAGGGAAAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVITVLF*KGKRPP
Trigger: TGGTGGTCTTTTCCCTTTCCAGAATAGAACAGTGAT...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAGGAGGACTGAGCTGCTaGGGTCCACCCGAGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIGGLSC*GPPESS
Trigger: GCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCC...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp TTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCTTGTCAGAGGTGGGGTGTTGTCAGTGTGCAGAATaGCAGCCAGCCCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: FVAIRCKATDVSLSEVGCCQCAE*QPAPQS
Trigger: ACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACA...ACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR TCA 90 bp CGATCAGGTGCAAAGCTACTGATGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACCAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RSGAKLLMFPCQRWGVLHQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...GTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp ATCTGCAGGACACACTCCTCTGCACCATACTGCTGGTACCGGTTGTACTGCTCTCAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ICRTHSSAPYCWYRLYCSQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp AGGACACACTCCTCTGCACCATACTGCTGGTACCGGTTGTACTGCTCTTCTCCCCCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: RTHSSAPYCWYRLYCSSPPRILK*WSSLIK
Trigger: CTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGG...GGGAGAAGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp GCGATCAGGTGCAAAGCTACTGATGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACT +
Preference number: 4 (lower is better)
Translates to: AIRCKATDVSLSEVGCAPLSSCS*GFKYGT
Trigger: AGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAG...TGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAATGCTGCACTGTACCCTaGGTTTTCCCGGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKCCTVP*VFPAAL
Trigger: GAGTGCAGCCGGGAAAACTCAGGGTACAGTGCAGCA...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCAAGGATGTGGAAAACTTaGGTTCATCCCCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FLCELWASCHRSVVTVGPRMWKT*VHPLSS
Trigger: GGAAGAGAGGGGATGAACTCAAGTTTTCCACATCCT...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCGCACAATGTGAACAATaGTCTGCTGATCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSAQCEQ*SADPGH
Trigger: GTGACCTGGATCAGCAGAGCATTGTTCACATTGTGC...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGCTCTTTAATCAAGGAGTTGGGACAGCCAGCCACACAAGGCAGGGAGTAGCCGTCGTCGCCTCCAGTTaGATTCATTTCTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: ELFNQGVGTASHTRQGVAVVASS*IHFLTF
Trigger: AAAGGTCAAGAAATGAATGCAACTGGAGGCGACGAC...GGCTACTCCCTGCCTTGTGTGGCTGGCTGTCCCAACTCCTTGATTAAAGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR GCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTATTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CCTTCATGGTACGCTTCTTTACATTCCCGGCAGAAGGCAAATGCCAATGTGTCCTCCTCTGCACCATACTaGTGGTACCGGTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: PSWYASLHSRQKANANVSSSAPY*WYRLYC
Trigger: GCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGA...GGACACATTGGCATTTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR GCA 90 bp CAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGACTTCAAATACGGCACTaGACTCCCCTTCATGGTACG +
Preference number: 4 (lower is better)
Translates to: QIRHCTPLHGTLLYIPGRLQIRH*TPLHGT
Trigger: CGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG...TCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCCTTCAAATACGGCACTaGACTCCCCTTCATGGTACG +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACLQIRH*TPLHGT
Trigger: CGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTTCCCAACGAGCCTaGTCGGCGGCTCTTTCATCG +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEASQRA*SAALSS
Trigger: CGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGC...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGAGGTTTCTTTGGAGGCTaGTTCCCAACGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRGFFGG*FPTSLL
Trigger: GAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAACC...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACT +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGSTTRA*TGAADT
Trigger: AGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCT...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGATTTGACAGGGGCCTTTaGAATACACATAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRFDRGL*NTHKSC
Trigger: ACAGCTTTTATGTGTATTGCAAAGGCCCCTGTCAAA...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGGTCAAGGTGAGCGTTaGCTGCCTGCAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEGQGER*LPAGAA
Trigger: TGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACC...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTATCCAGGAGTTTCTTCTaGAATTTGGCTGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVSRSFF*NLAVVG
Trigger: TCCAACTACAGCCAAATTGCAGAAGAAACTCCTGGA...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGGGGAACCCCTGGTATaGAGAGCTCCCTGGGACTTG +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEGEPLV*RAPWDL
Trigger: CAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCC...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCCCAGTCTCTCCCCGGTaGAGGGCCTCTGAGACGACG +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLPVSPR*RASETT
Trigger: CGTCGTCTCAGAGGCCCTGCACCGGGGAGAGACTGG...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SNTALHSPSWYASLHSRQRIDLH*ETMAGV
Trigger: AACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCT...CTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAAACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELETTSLS*KMLVSE
Trigger: TTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGT...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: ASNTALHSPSWYASLHSRTTSLS*KMLVSE
Trigger: TTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGT...CCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGKITRN*SAGTPC
Trigger: ACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTT...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGTCTGCACCATACTGCTaGTACCGGTTGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: SNTALHSPSWYASLHSRQSAPYC*YRLYCS
Trigger: AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGA...CTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCTCTGCACCATACTGCTaGTACCGGTTGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACSAPYC*YRLYCS
Trigger: AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGA...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTTCTGCACCATACTGCTaGTACCGGTTGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPSAPYC*YRLYCS
Trigger: AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGA...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAGAATCCTGAAGTGATGGAGCTCTTTAATCAAGGAGTTGGGACAGCCAGCCACATCATCCCAGCAAGATaGACCCTGGGTCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QNPEVMELFNQGVGTASHIIPAR*TLGQGE
Trigger: CTCACCTTGACCCAGGGTCCATCTTGCTGGGATGAT...GTGGCTGGCTGTCCCAACTCCTTGATTAAAGAGCTCCATCACTTCAGGATTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS-3UTR CCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTGGTCACTGGGTAGGTaGCGGCTGCGGGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDWSLGR*RLRARN
Trigger: GTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGCACTATCATGGTCACTaGGTAGGTGGCGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEHYHGH*VGGGCG
Trigger: CCCGCAGCCGCCACCTACCCAGTGACCATGATAGTG...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGGCGCCCGGCCGCCCTaGCTACACGTCGAACCAGTG +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETGARPP*LHVEPV
Trigger: CACTGGTTCGACGTGTAGCCAGGGCGGCCGGGCGCC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTAATGAAGGTAGACACTaGGTATGCTCCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPNEGRH*VCSPRM
Trigger: CATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGGATCCTAGGGTGCCTGAGCTCATGGGAGCAAACCTTGTTCAGGCACCGCAAGAAACACCTTGTCAATaGCATCTTCATGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: GDPRVPELMGANLVQAPQETPCQ*HLHGVY
Trigger: GTAAACACCATGAAGATGCCATTGACAAGGTGTTTC...TTGCGGTGCCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCCTAGGATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAGTATGCAGAGCTCCCTaGGACTTGCAGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRVCRAP*DLQIGQ
Trigger: CTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATAC...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGCTCCTGGGGAACCCCTaGTATGCAGAGCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWLLGNP*YAELPG
Trigger: CCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATGGTCTGGACTCAGTATaGACACGAGCCACTGGGTGC +
Preference number: 4 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNGLDSV*TRATGC
Trigger: GCACCCAGTGGCTCGTGTCCATACTGAGTCCAGACC...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTTGGAGTCGGTAGAATCACTGTTCTATTCTaGAAAGGGAAAAGACCACCA +
Preference number: 4 (lower is better)
Translates to: GLPVTGLLSPWGHVGVGRITVLF*KGKRPP
Trigger: TGGTGGTCTTTTCCCTTTCCAGAATAGAACAGTGAT...TCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 72 bp TTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATGTaGGAGTCGGTAGATTTTCAGACAGTGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: FLSQVCCHRGAM*ESVDFQTVKPH
Trigger: ATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 72 bp TTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTaGTCACCGTGGGGCCATGTTGGAGTCGGTAGATTT +
Preference number: 4 (lower is better)
Translates to: FYVSFGLPVTGL*SPWGHVGVGRF
Trigger: AAATCTACCGACTCCAACATGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 72 bp CTGTGTGCTCCACGTGACAGAAGGGAGCCACCTGATTaGTCGCATCGGGCCAGTGTAAGGAAGTGTAATTTA +
Preference number: 4 (lower is better)
Translates to: LCAPRDRREPPD*SHRASVRKCNL
Trigger: TAAATTACACTTCCTTACACTGGCCCGATGCGACAAATCAGGTGGCTCCCTTCTGTCACGTGGAGCACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGCPLRR*LSSGQA
Trigger: AGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCA...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCCTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACT +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACLSSCS*GFKYGT
Trigger: AGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAG...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGGTGTCATCCGGAGGCTaGGAACGCCTGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWVSSGG*ERLLVV
Trigger: CACCACCAACAGGCGTTCTCAGCCTCCGGATGACAC...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGTGTCATCCGGAGGCTaGGAACGCCTGTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGVSSGG*ERLLVV
Trigger: CACCACCAACAGGCGTTCTCAGCCTCCGGATGACAC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTCCGGTGCAGGGCCTCTaGGACGACGGGACTGTCCTC +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETPVQGL*DDGTVL
Trigger: GAGGACAGTCCCGTCGTCTCAGAGGCCCTGCACCGG...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GCACTAGTCCCAGGGCAGTGTGGGGATTGGCATTCACCACTCATCCGGTTTGGATTTAAAGAAAAATTCTaGACTAGTCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ALVPGQCGDWHSPLIRFGFKEKF*TSPRAV
Trigger: CACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAA...TCCAAACCGGATGAGTGGTGAATGCCAATCCCCACACTGCCCTGGGACTAGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGTTTAAAGAAAAATTCTaGACTAGTCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRFKEKF*TSPRAV
Trigger: CACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAA...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGGAAAACTTGAGTTCATCCTCCTCTGCACCATACTaGTGGTACCGGTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: QLGKEGQVSQDVENLSSSSSAPY*WYRLYC
Trigger: GCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGA...GGATGAACTCAAGTTTTCCACATCCTGGGACACCTGTCCCTCTTTTCCTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTTCTTTGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTTTTGACAGGGGCCTTTaGAATACACATAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: VSLEAASQRACSAALSSTFDRGL*NTHKSC
Trigger: ACAGCTTTTATGTGTATTGCAAAGGCCCCTGTCAAA...AGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAGGTCAAGGTGAGCGTTaGCTGCCTGCAGGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIGQGER*LPAGAA
Trigger: TGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACC...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTGGGTAGGTGGCGGCTaGGGGCCAGGAACAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTWVGGG*GPGTGP
Trigger: TGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCA...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCAAAGAGAAGCCCTGTTaGCGATTTAATAATTTACAG +
Preference number: 4 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVKEKPC*RFNNLQ
Trigger: CTGTAAATTATTAAATCGGCAACAGGGCTTCTCTTT...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGRIDLH*ETMAGV
Trigger: AACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCT...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCACACAGTATAAGTGGAAACAGTCTAAGCAAATCACGTGGCGGGAGTTGCACATCATCCCAGCAAGATaGACCCTGGACTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: VTQYKWKQSKQITWRELHIIPAR*TLDFQL
Trigger: CAGCTGGAAGTCCAGGGTCCATCTTGCTGGGATGAT...GTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR CCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGTGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWWRELH*KTRTGL
Trigger: GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCA...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTTCTGCACCATACTGCTaGTACCGGTTGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESSAPYC*YRLYCS
Trigger: AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGA...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAACTGCACTCCCCTTCATaGTACGCTTCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELELHSPS*YASLHS
Trigger: GGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAG...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCAGATGGTTGGAAGAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGCAGCAAGATGGACCCTaGGTCAAGGTGAGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: LRWLEEMGYLRQLGKEGQQQDGP*VKVSVA
Trigger: GGCAACGCTCACCTTGACCCAGGGTCCATCTTGCTG...CTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTCTTCCAACCATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTAATGAAGGTAGACACTaGGTATGCTCCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGNEGRH*VCSPRM
Trigger: CATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTaGTGGTGTCGCAGATGGCTC +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEAENAC*WCRRWL
Trigger: GAGCCATCTGCGACACCACCAACAGGCGTTCTCAGC...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTCTCTTCTGCGTAGTGTaGGTAAGAGCATGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESLFCVV*VRACGL
Trigger: CAAACCGCATGCTCTTACCCACACTACGCAGAAGAG...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCAGGGACTGTCCTCAGATaGTTGGAAGAAATGGGTTAT +
Preference number: 4 (lower is better)
Translates to: FLCELWASCHRSVVTVGPGTVLR*LEEMGY
Trigger: ATAACCCATTTCTTCCAACCATCTGAGGACAGTCCC...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGGAAAACTTGAGTTCATCCGCCTTGATCAGGGTCTaGACTCAGTATGGACACGAG +
Preference number: 4 (lower is better)
Translates to: QLGKEGQVSQDVENLSSSALIRV*TQYGHE
Trigger: CTCGTGTCCATACTGAGTCCAGACCCTGATCAAGGC...GGATGAACTCAAGTTTTCCACATCCTGGGACACCTGTCCCTCTTTTCCTAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGAGCCTTGATCAGGGTCTaGACTCAGTATGGACACGAG +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRALIRV*TQYGHE
Trigger: CTCGTGTCCATACTGAGTCCAGACCCTGATCAAGGC...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAACGCAGCATGCAGATTaGGAAGGCGCAATAATGCAA +
Preference number: 4 (lower is better)
Translates to: QIRHCTPLHGTLLYIPGRTQHAD*EGAIMQ
Trigger: TTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGT...TCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR CAA 72 bp GGCAGTGTGGGGATTGGCATTCACCACTCATCCGGTTaGGAATTAAAACATCATCCCAGCAAGATGGACCCT +
Preference number: 4 (lower is better)
Translates to: GSVGIGIHHSSG*ELKHHPSKMDP
Trigger: AGGGTCCATCTTGCTGGGATGATGTTTTAATTCCAAACCGGATGAGTGGTGAATGCCAATCCCCACACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366894.6
3UTR CAA 72 bp GATACATGGATTGCACTTGAATCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: DTWIALESVLWY*CHPEAENACWW
Trigger: CCACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGAGTCTCCTGGGAGGACTaGGCTGCTGAGGTCCACCCG +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGVSWED*AAEVHP
Trigger: CGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGAC...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTCCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPPRILK*WSSLIK
Trigger: CTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGG...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDCPLRR*LSSGQA
Trigger: AGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTCTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACT +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGLSSCS*GFKYGT
Trigger: AGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAG...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTCTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACT +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESLSSCS*GFKYGT
Trigger: AGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAG...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: FLCELWASCHRSVVTVGPFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGTCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWSRGGS*TGKPGR
Trigger: CCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGA...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGACTTCAAATACGGCACTaGACTCCCCTTCATGGTACG +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRLQIRH*TPLHGT
Trigger: CGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCGCTTCCCAACGAGCCTaGTCGGCGGCTCTTTCATCG +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLASQRA*SAALSS
Trigger: CGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGC...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCTTGTACTTTCTCTTCTaGGTAGTGTGGGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSLYFLF*VVWVRA
Trigger: TGCTCTTACCCACACTACGCAGAAGAGAAAGTACAA...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTCCAGTCTCTCCCCGGTaGAGGGCCTCTGAGACGACG +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETPVSPR*RASETT
Trigger: CGTCGTCTCAGAGGCCCTGCACCGGGGAGAGACTGG...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAAAGCCCAACGCAGCATaGAGATTGGGAAGGCGCAAT +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKKPNAA*RLGRRN
Trigger: ATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTT...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTCTCCCGCCGCGTTTCTaGGGTCGTCGCCTCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTLPPRF*GRRLQL
Trigger: CAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAG...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp GGAAGGCGCAATAATGCAAACACCATCAGGAAGAAAGCTATGGATGATGGAAAAGGGCAGTGTGGGGATTaGCATTCACCACTCATCCGG +
Preference number: 4 (lower is better)
Translates to: GRRNNANTIRKKAMDDGKGQCGD*HSPLIR
Trigger: CCGGATGAGTGGTGAATGCCAATCCCCACACTGCCC...TTTTCCATCATCCATAGCTTTCTTCCTGATGGTGTTTGCATTATTGCGCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCAGATGGTTGGAAGAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGTTTTCCACTGGTACATaGCAGCGGGGACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LRWLEEMGYLRQLGKEGQFSTGT*QRGQGL
Trigger: CAAGCCCTGTCCCCGCTGCCATGTACCAGTGGAAAA...CTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTCTTCCAACCATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCTACACGTCGAACCAGTaGTCCCCCATGCAGACGCGG +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLYTSNQ*SPMQTR
Trigger: CCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTGGTCACTGGGTAGGTaGCGGCTGCGGGCCAGGAAC +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTWSLGR*RLRARN
Trigger: GTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCA...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCACACTATCATGGTCACTaGGTAGGTGGCGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSHYHGH*VGGGCG
Trigger: CCCGCAGCCGCCACCTACCCAGTGACCATGATAGTG...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGAAATGAAGGTAGACACTaGGTATGCTCCCCCAGGATG +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRNEGRH*VCSPRM
Trigger: CATCCTGGGGGAGCATACCCAGTGTCTACCTTCATT...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGTGGTGGTGTCGCAGATaGCTCTGCTGTCTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEWWCRR*LCCLVW
Trigger: CCACACAAGACAGCAGAGCCATCTGCGACACCACCA...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCGCCATGAATCTAGTTTaGAGAACCCACTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACAMNLV*RTHCSS
Trigger: TGAACTGCAGTGGGTTCTCCAAACTAGATTCATGGC...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAGTATGCAGAGCTCCCTaGGACTTGCAGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKVCRAP*DLQIGQ
Trigger: CTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATAC...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCAGATGGTTGGAAGAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGAGAGAAGGTCTCTCCTaGGGAACCCCTGGTATGCAG +
Preference number: 4 (lower is better)
Translates to: LRWLEEMGYLRQLGKEGQREGLS*GTPGMQ
Trigger: CTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCT...CTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTCTTCCAACCATCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTGTTGCATTCATTTCTTaGCCTTTTCTCCACGGTCTC +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESVAFIS*PFLHGL
Trigger: GAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAAC...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGACAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAACAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELEQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp ACGGGGCTCCTGACGTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTCCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: TGLLTSVHVMQVMFRLFVPRILK*WSSLIK
Trigger: CTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGG...AACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGCCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp AAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAATGTTCACGATCTTCCTaGGAAGTCAGACAATACAGG +
Preference number: 4 (lower is better)
Translates to: KYGTALPFMVRFFTFPAECSRSS*EVRQYR
Trigger: CCTGTATTGTCTGACTTCTCAGGAAGATCGTGAACA...TTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR GCA 90 bp GGCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGTTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: GFKYGTALPFMVRFFTFPFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...CGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDSRGGS*TGKPGR
Trigger: CCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp ATGTTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCTTGTCACAGGACACACTCCTCTaGACCATACTGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: MFRLFVAIRCKATDVSLSQDTLL*TILLVP
Trigger: CGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTG...TGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp TTCCTTGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATTCTGCACTAGTCAGGACACACTCCTCTaGACCATACTGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: FLVRGGVCSTFKEKFCTSQDTLL*TILLVP
Trigger: CGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTG...ACTAGTGCAGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGCAGGACACACTCCTCTaGACCATACTGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWQDTLL*TILLVP
Trigger: CGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTG...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCGGTTTCTTTGGAGGCTaGTTCCCAACGAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGGFFGG*FPTSLL
Trigger: GAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAACC...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTAGCACCACTCGAGCCTaGACTGGGGCTGCGGACACT +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETSTTRA*TGAADT
Trigger: AGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCT...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCAAGGTGAGCGTTGCCTaGCTGCAGGTGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLKVSVA*LQVLHC
Trigger: ACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTT...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATGGTAGACACTGGGTATaGTCCCCCAGGATGTGGCGA +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDGRHWV*SPRMWR
Trigger: TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACC...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCTTGCACTTGAATCTGTaGTCTGGTATTTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSLHLNL*SGICVI
Trigger: GATGACACAAATACCAGAGCACAGATTCAAGTGCAA...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCATTGCACTTGAATCTGTaGTCTGGTATTTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: FLCELWASCHRSVVTVGPLHLNL*SGICVI
Trigger: GATGACACAAATACCAGAGCACAGATTCAAGTGCAA...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCGTTTGGAGAACCCACTaGAGTTCATTTTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSVWRTH*SSFYRE
Trigger: TTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAAC...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAATGGACAGAGAGGGTGTaGCAAAGGGGTATAAACCCT +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKWTERV*QRGINP
Trigger: AGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCA...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCGTGTGGGTAAGAGCATaGGGTTTGCCGCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGVWVRA*GLPHAV
Trigger: CACTGCATGCGGCAAACCGCATGCTCTTACCCACAC...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGTGTGGGTAAGAGCATaGGGTTTGCCGCATGCAGTG +
Preference number: 4 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGVWVRA*GLPHAV
Trigger: CACTGCATGCGGCAAACCGCATGCTCTTACCCACAC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGAACCCGAGTCAAGCTCTaGGGCTCCCGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGTRVKL*GSRSQP
Trigger: AGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGT...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp GCTCCTGACGTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTGCGATCTGCACTCCCCTTCATaGTACGCTTCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: APDVCARNASDVPTICCDLHSPS*YASLHS
Trigger: GGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAG...ATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp AAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAACTTGAATCTGTGCTCTaGTATTTGTGTCATCCGGAG +
Preference number: 4 (lower is better)
Translates to: KYGTALPFMVRFFTFPAELESVL*YLCHPE
Trigger: CTCCGGATGACACAAATACCAGAGCACAGATTCAAG...TTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCAACCCATACAGATACATaGATTGCACTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: FLCELWASCHRSVVTVGPTHTDT*IALESV
Trigger: CACAGATTCAAGTGCAATCCATGTATCTGTATGGGT...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGAGAAGGTCTCTCCTaGGGAACCCCTGGTATGCAG +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGREGLS*GTPGMQ
Trigger: CTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCT...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAGGGACTGTCCTCAGATaGTTGGAAGAAATGGGTTAT +
Preference number: 4 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRGTVLR*LEEMGY
Trigger: ATAACCCATTTCTTCCAACCATCTGAGGACAGTCCC...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTGTCAGTGTGCAGAATaGCAGCCAGCCCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDCQCAE*QPAPQS
Trigger: ACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp TTCTATAGCTTTGCTACCAATGACTTTTCCTTGAACGATGTATTGAATGAGGCATGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FYSFATNDFSLNDVLNEACPLRR*LSSGQA
Trigger: AGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCA...TGCCTCATTCAATACATCGTTCAAGGAAAAGTCATTGGTAGCAAAGCTATAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGATGTTCACGATCTTCCTaGGAAGTCAGACAATACAGG +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRCSRSS*EVRQYR
Trigger: CCTGTATTGTCTGACTTCTCAGGAAGATCGTGAACA...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDFLLSV*RMTASP
Trigger: GGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATATCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: SKDFSATSKKRSPVADLISRGGS*TGKPGR
Trigger: CCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGA...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp ATGTTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCTTGTCATCCTCTGCACCATACTaGTGGTACCGGTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: MFRLFVAIRCKATDVSLSSSAPY*WYRLYC
Trigger: GCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGA...TGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTTCCAGGAGTTTCTTCTaGAATTTGGCTGTAGTTGGA +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESSRSFF*NLAVVG
Trigger: TCCAACTACAGCCAAATTGCAGAAGAAACTCCTGGA...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCTTGCACTTGAATCTGTaGTCTGGTATTTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACLHLNL*SGICVI
Trigger: GATGACACAAATACCAGAGCACAGATTCAAGTGCAA...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAGAGCTCCCTGGGACTTaGAGATTGGACAGAGAGGGT +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSELPGT*RLDREG
Trigger: ACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTC...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTTGTACTTTCTCTTCTaGGTAGTGTGGGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGLYFLF*VVWVRA
Trigger: TGCTCTTACCCACACTACGCAGAAGAGAAAGTACAA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIKITRN*SAGTPC
Trigger: ACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTT...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGT +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWKITRN*SAGTPC
Trigger: ACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTT...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTCTATAGCTTTGCTACCAATGACTTTTCCTTGAACGATGTATTGAATGAGGCATGGCGGGAGTTGCACTaGAAAACCAGGACGGGGCTC +
Preference number: 4 (lower is better)
Translates to: FYSFATNDFSLNDVLNEAWRELH*KTRTGL
Trigger: GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCA...TGCCTCATTCAATACATCGTTCAAGGAAAAGTCATTGGTAGCAAAGCTATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGTCTGCACCATACTGCTaGTACCGGTTGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPESAPYC*YRLYCS
Trigger: AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGA...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGACAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGQVTFL*SGSGSS
Trigger: GCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTG...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTCAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETQVTFL*SGSGSS
Trigger: GCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTG...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAACTGCACTCCCCTTCATaGTACGCTTCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKLHSPS*YASLHS
Trigger: GGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAG...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCTTTTCCACTGGTACATaGCAGCGGGGACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLFSTGT*QRGQGL
Trigger: CAAGCCCTGTCCCCGCTGCCATGTACCAGTGGAAAA...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTCACTATCATGGTCACTaGGTAGGTGGCGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTHYHGH*VGGGCG
Trigger: CCCGCAGCCGCCACCTACCCAGTGACCATGATAGTG...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTCACTATCATGGTCACTaGGTAGGTGGCGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETHYHGH*VGGGCG
Trigger: CCCGCAGCCGCCACCTACCCAGTGACCATGATAGTG...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGACTTGAATCTGTGCTCTaGTATTTGTGTCATCCGGAG +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRLESVL*YLCHPE
Trigger: CTCCGGATGACACAAATACCAGAGCACAGATTCAAG...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGAGCCATGAATCTAGTTTaGAGAACCCACTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRAMNLV*RTHCSS
Trigger: TGAACTGCAGTGGGTTCTCCAAACTAGATTCATGGC...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCCTGGGACTTGCAGATTaGACAGAGAGGGTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGLGLAD*TERVCQ
Trigger: TTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAG...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTCTGTCCTCAGATGGTTaGAAGAAATGGGTTATCTTA +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPLSSDG*KKWVIL
Trigger: TAAGATAACCCATTTCTTCCAACCATCTGAGGACAG...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATACGCAGCATGCAGATTaGGAAGGCGCAATAATGCAA +
Preference number: 4 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNTQHAD*EGAIMQ
Trigger: TTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGT...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CTCAGATGGTTGGAAGAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGCAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: LRWLEEMGYLRQLGKEGQQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...CTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTCTTCCAACCATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATTCTGCACTAGTCCCAGGGCACAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: RGGVCSTFKEKFCTSPRAQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...TGCCCTGGGACTAGTGCAGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGATGCTGCACTGTACCCTaGGTTTTCCCGGCTGCACTC +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGCCTVP*VFPAAL
Trigger: GAGTGCAGCCGGGAAAACTCAGGGTACAGTGCAGCA...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGTCCACCATTTCTATGTaGGCTTTGGGCTTCCTGTCA +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPESTISM*ALGFLS
Trigger: TGACAGGAAGCCCAAAGCTCACATAGAAATGGTGGA...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TCAGGTGCAAAGCTACTGATGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACATTTTTAAAGAAAAATTCTaGACTAGTCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: SGAKLLMFPCQRWGVLHIFKEKF*TSPRAV
Trigger: CACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAA...AATGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp CCTTCATGGTACGCTTCTTTACATTCCCGGCAGAAGGCAAATGCCAATGTGTCCTTTAAAGAAAAATTCTaGACTAGTCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: PSWYASLHSRQKANANVSFKEKF*TSPRAV
Trigger: CACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAA...GGACACATTGGCATTTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR GCA 90 bp CAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGGAAAACTTGAGTTCATCCGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: QLGKEGQVSQDVENLSSSVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...GGATGAACTCAAGTTTTCCACATCCTGGGACACCTGTCCCTCTTTTCCTAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGATTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTCTATAGCTTTGCTACCAATGACTTTTCCTTGAACGATGTATTGAATGAGGCATCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: FYSFATNDFSLNDVLNEASRGGS*TGKPGR
Trigger: CCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGA...TGCCTCATTCAATACATCGTTCAAGGAAAAGTCATTGGTAGCAAAGCTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTTCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGG +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETSRGGS*TGKPGR
Trigger: CCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGA...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GCTACTGATGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATCTTCAAATACGGCACTaGACTCCCCTTCATGGTACG +
Preference number: 4 (lower is better)
Translates to: ATDVSLSEVGCAPHLKKNLQIRH*TPLHGT
Trigger: CGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG...ATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR GCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGCTTCAAATACGGCACTaGACTCCCCTTCATGGTACG +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWLQIRH*TPLHGT
Trigger: CGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGTGGACAGAGAGGGTGTaGCAAAGGGGTATAAACCCT +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWWTERV*QRGINP
Trigger: AGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCA...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCAAAAGAGAAGCCCTGTTaGCGATTTAATAATTTACAG +
Preference number: 4 (lower is better)
Translates to: FLCELWASCHRSVVTVGPKEKPC*RFNNLQ
Trigger: CTGTAAATTATTAAATCGGCAACAGGGCTTCTCTTT...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTTTAAAGAAAAATTCCTaGACAGTCCAGTCATTCCTC +
Preference number: 4 (lower is better)
Translates to: GPPCASETHALSYVHDLPLKKNS*TVQSFL
Trigger: GAGGAATGACTGGACTGTGCAGGAATTTTTCTTTAA...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366896.5
CDS-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGTTSLS*KMLVSE
Trigger: TTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGT...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTGGGCAGTGTGGGGATTaGCATTCACCACTCATCCGG +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTGQCGD*HSPLIR
Trigger: CCGGATGAGTGGTGAATGCCAATCCCCACACTGCCC...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACVTQYK*KQSKQI
Trigger: GATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCTTGTCAGAGCTGCACTCCCCTTCATaGTACGCTTCTTTACATTCC +
Preference number: 4 (lower is better)
Translates to: FRLFVAIRCKATDVSLSELHSPS*YASLHS
Trigger: GGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAG...CTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGACAGCAAGATGGACCCTaGGTCAAGGTGAGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGQQDGP*VKVSVA
Trigger: GGCAACGCTCACCTTGACCCAGGGTCCATCTTGCTG...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGAGAACGCCTGTTGGTaGTGTCGCAGATGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETENACW*CRRWLC
Trigger: GCAGAGCCATCTGCGACACCACCAACAGGCGTTCTC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAATTTTTGACTATTGCCTaGGGTTCTTTGGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: ECVCARARVCVCLKRELEFLTIA*GSLGID
Trigger: ATCTATTCCCAAAGAACCCCAGGCAATAGTCAAAAA...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGTTTTTGACTATTGCCTaGGGTTCTTTGGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: ASNTALHSPSWYASLHSRFLTIA*GSLGID
Trigger: ATCTATTCCCAAAGAACCCCAGGCAATAGTCAAAAA...CCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000673871.1
3UTR CAA 72 bp ACCCTTCTGATGGAGAGAGTCGGGCGTGTCTTCATTTaGGTAGTTCTGGAAAGGCTCCTCTTTAAAGATTCT +
Preference number: 4 (lower is better)
Translates to: TLLMERVGRVFI*VVLERLLFKDS
Trigger: AGAATCTTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTCCATCAGAAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTGTCAGTGTGCAGAATaGCAGCCAGCCCCACAGAGT +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTCQCAE*QPAPQS
Trigger: ACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACA...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATACAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCCTGAGTAGTTGTTCCTaGGGCTTCAAATACGGCACT +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGLSSCS*GFKYGT
Trigger: AGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAG...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGTCTCTCTCCAGCTACTaGTTCTGCCTGTCTCGAATT +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWSLSSY*FCLSRI
Trigger: AATTCGAGACAGGCAGAATCAGTAGCTGGAGAGAGA...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTGTGTTGTTAATCTTTTaGTTGTGTTGTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESVLLIF*LCCEWL
Trigger: CAGCCATTCACAACACAATCAAAAGATTAACAACAC...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTFLLSV*RMTASP
Trigger: GGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAA...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: ERVGRVFILVVLERLLFKVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTCTATAGCTTTGCTACCAATGACTTTTCCTTGAACGATGTATTGAATGAGGCACAGGACACACTCCTCTaGACCATACTGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: FYSFATNDFSLNDVLNEAQDTLL*TILLVP
Trigger: CGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTG...TGCCTCATTCAATACATCGTTCAAGGAAAAGTCATTGGTAGCAAAGCTATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTCAGGACACACTCCTCTaGACCATACTGCTGGTACCG +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETQDTLL*TILLVP
Trigger: CGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCTG...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTAAGGTGAGCGTTGCCTaGCTGCAGGTGCTGCACTGT +
Preference number: 4 (lower is better)
Translates to: FPHLELCNSSIALLPMTFKVSVA*LQVLHC
Trigger: ACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTT...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTGTCGCAGATGGCTCTaGTGTCTTGTGTGGACAAAC +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDCRRWL*CLVWTN
Trigger: GTTTGTCCACACAAGACAGCAGAGCCATCTGCGACA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGTCCACTGGGAAACCATaGCTGGAGTTGAACCTGACA +
Preference number: 4 (lower is better)
Translates to: GLFPHLELCNSSIALLPMSTGKP*LELNLT
Trigger: TGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGA...CATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTCCACTGGGAAACCATaGCTGGAGTTGAACCTGACA +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDSTGKP*LELNLT
Trigger: TGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLRIDLH*ETMAGV
Trigger: AACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCT...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: GLFPHLELCNSSIALLPMTTSLS*KMLVSE
Trigger: TTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGT...CATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTTTTTCCACTGGTACATaGCAGCGGGGACAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETFSTGT*QRGQGL
Trigger: CAAGCCCTGTCCCCGCTGCCATGTACCAGTGGAAAA...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTCAGATGGTTGGAAGAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGCTTGAATCTGTGCTCTaGTATTTGTGTCATCCGGAG +
Preference number: 4 (lower is better)
Translates to: LRWLEEMGYLRQLGKEGQLESVL*YLCHPE
Trigger: CTCCGGATGACACAAATACCAGAGCACAGATTCAAG...CTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTCTTCCAACCATCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGAGAAACACCTTGTCAATaGCATCTTCATGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRETPCQ*HLHGVY
Trigger: GTAAACACCATGAAGATGCCATTGACAAGGTGTTTC...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGGAAAACTTGAGTTCATCCGAAACACCTTGTCAATaGCATCTTCATGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: QLGKEGQVSQDVENLSSSETPCQ*HLHGVY
Trigger: GTAAACACCATGAAGATGCCATTGACAAGGTGTTTC...GGATGAACTCAAGTTTTCCACATCCTGGGACACCTGTCCCTCTTTTCCTAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATCTCTTCTGCGTAGTGTaGGTAAGAGCATGCGGTTTG +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDLFCVV*VRACGL
Trigger: CAAACCGCATGCTCTTACCCACACTACGCAGAAGAG...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGACTGTCCTCAGATGGTTaGAAGAAATGGGTTATCTTA +
Preference number: 4 (lower is better)
Translates to: RELENEGRHWVCSPRMWRLSSDG*KKWVIL
Trigger: TAAGATAACCCATTTCTTCCAACCATCTGAGGACAG...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
3UTR CAA 72 bp TTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAAA +
Preference number: 4 (lower is better)
Translates to: FVAIRCKATDVS*SEVGCAPHLKK
Trigger: TTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR TCA 90 bp TGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATTCTGCACTGTTGCATTCATTTCTTaGCCTTTTCTCCACGGTCTC +
Preference number: 4 (lower is better)
Translates to: CFLVRGGVCSTFKEKFCTVAFIS*PFLHGL
Trigger: GAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAAC...AGTGCAGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR TCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAGTTGCATTCATTTCTTaGCCTTTTCTCCACGGTCTC +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIVAFIS*PFLHGL
Trigger: GAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAAC...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTACTTCCAGCTGGTGGTaGGTCCTTCCTGCTGTCAGT +
Preference number: 4 (lower is better)
Translates to: FPHLELCNSSIALLPMTFTSSWW*VLPAVS
Trigger: ACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGT...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCACAGGTGCAAAGCTACTaGTGTTTCCTTGTCAGAGGT +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSQVQSY*CFLVRG
Trigger: ACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTG...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GGAAGGCGCAATAATGCAAACACCATCAGGAAGAAAGCTATGGATGATGGAAAACCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: GRRNNANTIRKKAMDDGKPRILK*WSSLIK
Trigger: CTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGG...TTTTCCATCATCCATAGCTTTCTTCCTGATGGTGTTTGCATTATTGCGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GGGCTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGGAACGATGTATTGAATaGGGCACTCACTTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GLFPHLELCNSSIALLPMERCIE*GTHFSL
Trigger: CAGGGAGAAGTGAGTGCCTCATTCAATACATCGTTC...CATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATTACATGGATTGCACTTaGATCTGTGCTCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNYMDCT*ICALVF
Trigger: AAATACCAGAGCACAGATTCAAGTGCAATCCATGTA...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GGGCTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGGCACAATGTGAACAATaGTCTGCTGATCCAGGTCAC +
Preference number: 4 (lower is better)
Translates to: GLFPHLELCNSSIALLPMAQCEQ*SADPGH
Trigger: GTGACCTGGATCAGCAGAGCATTGTTCACATTGTGC...CATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGTCGTCGCCTCCAGTTaGATTCATTTCTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGVVASS*IHFLTF
Trigger: AAAGGTCAAGAAATGAATGCAACTGGAGGCGACGAC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGTTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGATCCTCTGCACCATACTaGTGGTACCGGTTGTACTGC +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGSSAPY*WYRLYC
Trigger: GCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGA...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATACTTCAAATACGGCACTaGACTCCCCTTCATGGTACG +
Preference number: 4 (lower is better)
Translates to: SKDFSATSKKRSPVADLILQIRH*TPLHGT
Trigger: CGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAG...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGTTGTACTTTCTCTTCTaGGTAGTGTGGGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPELYFLF*VVWVRA
Trigger: TGCTCTTACCCACACTACGCAGAAGAGAAAGTACAA...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTAAAGAGAAGCCCTGTTaGCGATTTAATAATTTACAG +
Preference number: 4 (lower is better)
Translates to: DWTERVCQRGINPSDGESKEKPC*RFNNLQ
Trigger: CTGTAAATTATTAAATCGGCAACAGGGCTTCTCTTT...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGAAAAGAGAAGCCCTGTTaGCGATTTAATAATTTACAG +
Preference number: 4 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRKEKPC*RFNNLQ
Trigger: CTGTAAATTATTAAATCGGCAACAGGGCTTCTCTTT...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GGGCTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: GLFPHLELCNSSIALLPMSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...CATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCATCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAA +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLSKQIT*RELHWK
Trigger: TTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGA...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTATCATCCCAGCAAGATaGACCCTGGGTCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTIIPAR*TLGQGE
Trigger: CTCACCTTGACCCAGGGTCCATCTTGCTGGGATGAT...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGTATGCAGAGCTCCCTaGGACTTGCAGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETVCRAP*DLQIGQ
Trigger: CTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATAC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATGTTGCATTCATTTCTTaGCCTTTTCTCCACGGTCTC +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDVAFIS*PFLHGL
Trigger: GAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAAC...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATACAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGCAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCCCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLPRILK*WSSLIK
Trigger: CTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGG...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GGGCTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGAAAGCTGTTGTAGATTaGTCTACCTGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: GLFPHLELCNSSIALLPMKAVVD*STCWTS
Trigger: GGAAGTCCAGCAGGTAGATCAATCTACAACAGCTTT...CATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCAAAGCTGTTGTAGATTaGTCTACCTGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLKAVVD*STCWTS
Trigger: GGAAGTCCAGCAGGTAGATCAATCTACAACAGCTTT...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTGTTCACGATCTTCCTaGGAAGTCAGACAATACAGG +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDCSRSS*EVRQYR
Trigger: CCTGTATTGTCTGACTTCTCAGGAAGATCGTGAACA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCATGTTCACGATCTTCCTaGGAAGTCAGACAATACAGG +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSCSRSS*EVRQYR
Trigger: CCTGTATTGTCTGACTTCTCAGGAAGATCGTGAACA...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTTGGACAGAGAGGGTGTaGCAAAGGGGTATAAACCCT +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETWTERV*QRGINP
Trigger: AGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCA...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGAAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGRIDLH*ETMAGV
Trigger: AACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCT...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTT +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETRIDLH*ETMAGV
Trigger: AACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCT...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAA +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETTTSLS*KMLVSE
Trigger: TTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGT...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTGCGATCAGGTGCAAGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: VCARNASDVPTICCDQVQVTQYK*KQSKQI
Trigger: GATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC...TTGCACCTGATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCACAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTTTCTATGTGAGCTTTaGGCTTCCTGTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDFLCEL*ASCHRS
Trigger: AGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCTTAAAGAAAAATTCCTaGGTCAAGGTGAGCGTTGCC +
Preference number: 4 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGLKKNS*VKVSVA
Trigger: GGCAACGCTCACCTTGACCCAGGAATTTTTCTTTAA...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366897.5
CDS-3UTR TCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATCAAACTGCCGATCATTaGGTCTTGTCACACAGTATA +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDQTADH*VLSHSI
Trigger: TATACTGTGTGACAAGACTCAATGATCGGCAGTTTG...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATAAAAGCTGTTGTAGATTaGTCTACCTGCTGGACTTCC +
Preference number: 4 (lower is better)
Translates to: SKDFSATSKKRSPVADLIKAVVD*STCWTS
Trigger: GGAAGTCCAGCAGGTAGATCAATCTACAACAGCTTT...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTGCACTCACTTCTCCCTaGGGCAGCTTATTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTALTSP*GSLFCS
Trigger: AGAACAAAATAAGCTGCCTCAGGGAGAAGTGAGTGC...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGTGTTGTTAATCTTTTaGTTGTGTTGTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: TDTWIALESVLWYLCHPEVLLIF*LCCEWL
Trigger: CAGCCATTCACAACACAATCAAAAGATTAACAACAC...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAGTCAGAGGTGGGGTGTaGTCCACATTTAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSVRGGV*STFKEK
Trigger: TTTTTCTTTAAATGTGGAGCACACCCCACCTCTGAC...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATATTTGACAGGGGCCTTTaGAATACACATAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIFDRGL*NTHKSC
Trigger: ACAGCTTTTATGTGTATTGCAAAGGCCCCTGTCAAA...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAGTTTGGAGAACCCACTaGAGTTCATTTTACAGAGAA +
Preference number: 4 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGVWRTH*SSFYRE
Trigger: TTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAAC...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTTCTGCACCATACTGCTaGTACCGGTTGTACTGCTCT +
Preference number: 4 (lower is better)
Translates to: FPHLELCNSSIALLPMTFSAPYC*YRLYCS
Trigger: AGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGA...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCATACAGATACATaGATTGCACTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGTHTDT*IALESV
Trigger: CACAGATTCAAGTGCAATCCATGTATCTGTATGGGT...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGACCCATACAGATACATaGATTGCACTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWTHTDT*IALESV
Trigger: CACAGATTCAAGTGCAATCCATGTATCTGTATGGGT...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATAGCCATGAATCTAGTTTaGAGAACCCACTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: SKDFSATSKKRSPVADLIAMNLV*RTHCSS
Trigger: TGAACTGCAGTGGGTTCTCCAAACTAGATTCATGGC...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATATTTCTATGTGAGCTTTaGGCTTCCTGTCACAGGTCT +
Preference number: 4 (lower is better)
Translates to: SKDFSATSKKRSPVADLIFLCEL*ASCHRS
Trigger: AGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGACCCAGAATCCTGAAGTaGTGGAGCTCTTTAATCAAG +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGPRILK*WSSLIK
Trigger: CTTGATTAAAGAGCTCCATCACTTCAGGATTCTGGG...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCTACATGGATTGCACTTaGATCTGTGCTCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: VLCGQTERDSGASSVILLYMDCT*ICALVF
Trigger: AAATACCAGAGCACAGATTCAAGTGCAATCCATGTA...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTGTCGTCGCCTCCAGTTaGATTCATTTCTTGACCTTT +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTVVASS*IHFLTF
Trigger: AAAGGTCAAGAAATGAATGCAACTGGAGGCGACGAC...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGAGTTCCGACTATTTGTTaGGATCAGGTGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGVPTIC*DQVQSY
Trigger: GTAGCTTTGCACCTGATCGCAACAAATAGTCGGAAC...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCATTTGACAGGGGCCTTTaGAATACACATAAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ESSLENPLQFILQRNTLSFDRGL*NTHKSC
Trigger: ACAGCTTTTATGTGTATTGCAAAGGCCCCTGTCAAA...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTTGCACTTGAATCTGTaGTCTGGTATTTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDLHLNL*SGICVI
Trigger: GATGACACAAATACCAGAGCACAGATTCAAGTGCAA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATATTGTACTTTCTCTTCTaGGTAGTGTGGGTAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SKDFSATSKKRSPVADLILYFLF*VVWVRA
Trigger: TGCTCTTACCCACACTACGCAGAAGAGAAAGTACAA...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp GCACGGGTGAATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: ARVNSQASYNKSVNHILIVTQYK*KQSKQI
Trigger: GATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC...TATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATTCACCCGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWVTQYK*KQSKQI
Trigger: GATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATGAAACACCTTGTCAATaGCATCTTCATGGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDETPCQ*HLHGVY
Trigger: GTAAACACCATGAAGATGCCATTGACAAGGTGTTTC...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGTTTTTGACTATTGCCTaGGGTTCTTTGGGAATAGAT +
Preference number: 4 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWFLTIA*GSLGID
Trigger: ATCTATTCCCAAAGAACCCCAGGCAATAGTCAAAAA...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATGTCACACAGTATAAGTaGAAACAGTCTAAGCAAATC +
Preference number: 4 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDVTQYK*KQSKQI
Trigger: GATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CCA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATAACCCATACAGATACATaGATTGCACTTGAATCTGTG +
Preference number: 4 (lower is better)
Translates to: SKDFSATSKKRSPVADLITHTDT*IALESV
Trigger: CACAGATTCAAGTGCAATCCATGTATCTGTATGGGT...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR TCA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGAAAAATTAAGCACGGGTaGATTCACAGGCATCTTACA +
Preference number: 4 (lower is better)
Translates to: NSQASYNKSVNHILIITGKIKHG*IHRHLT
Trigger: TGTAAGATGCCTGTGAATTCACCCGTGCTTAATTTT...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR TCA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTTACATGGATTGCACTTaGATCTGTGCTCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: FNNLQSLNPKGPPCASETYMDCT*ICALVF
Trigger: AAATACCAGAGCACAGATTCAAGTGCAATCCATGTA...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR GCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTAAAGAAAAATTCTaGACTAGTCCCAGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTFKEKF*TSPRAV
Trigger: CACTGCCCTGGGACTAGTGCAGAATTTTTCTTTAAA...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR GCA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTTTTGTTGCGATCAGGTaGAAAGCTACTGATGTTTCC +
Preference number: 4 (lower is better)
Translates to: FPHLELCNSSIALLPMTFFVAIR*KATDVS
Trigger: GGAAACATCAGTAGCTTTGCACCTGATCGCAACAAA...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CCA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTGGCTTTTTCCACATCTaGAACTCTGTAATTCTTCTA +
Preference number: 4 (lower is better)
Translates to: LFPHLELCNSSIALLPMTGFFHI*NSVILL
Trigger: TAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCC...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS GCA 90 bp CATGGTCACTGGGTAGGTGGCGGCTGCGGGCCAGGAACAGGCCCATaGGCGCAGCGGCGCCAGCCGCGCCTCCCACCAGCGGCTCTCCTG +
Preference number: 5 (lower is better)
Translates to: HGHWVGGGCGPGTGP*AQRRQPRLPPAALL
Trigger: CAGGAGAGCCGCTGGTGGGAGGCGCGGCTGGCGCCGCTGCGCGCATGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCATG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366892.5
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000674250.1
ENST00000674501.1
CDS CCA 90 bp TACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTaGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGCCAGGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: YPQPRPLPPSQVTFL*SGSGSSPAPQPGRG
Trigger: CCCCCGCCCTGGCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS CCA 90 bp TCTCCTGGGAGGACTGAGCTGCTGAGGTCCACCCGAGTCAAGCTCTaGGGCTCCCGCTCACAGCCTCCCGCCGCGTTTCTGGGGTCGTCG +
Preference number: 5 (lower is better)
Translates to: SPGRTELLRSTRVKL*GSRSQPPAAFLGSS
Trigger: CGACGACCCCAGAAACGCGGCGGGAGGCTGTGAGCGGGAGCCCCAGAGCTTGACTCGGGTGGACCTCAGCAGCTCAGTCCTCCCAGGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366897.5
ENST00000366898.6
ENST00000479615.5
ENST00000612540.1
ENST00000615065.1
ENST00000673871.1
ENST00000674232.1
ENST00000674501.1
CDS GCA 90 bp GTTGAACCTGACAAACACTATCATGGTCACTGGGTAGGTGGCGGCTaGGGGCCAGGAACAGGCCCATGCGCGCAGCGGCGCCAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: VEPDKHYHGHWVGGG*GPGTGPCAQRRQPR
Trigger: GCGCGGCTGGCGCCGCTGCGCGCATGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCATGATAGTGTTTGTCAGGTTCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366892.5
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000674501.1
CDS-3UTR CAA 90 bp GCTCCCCCAGGATGTGGCGATGGGGCGCCCGGCCGCCCTGGCTACACGTCGAACCGGGGTTTCATCATCTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: APPGCGDGAPGRPGYTSNRGFII*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGATGATGAAACCCCG...GTTCGACGTGTAGCCAGGGCGGCCGGGCGCCCCATCGCCACATCCTGGGGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS TCA 90 bp TTCGTTGTCCATACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGC +
Preference number: 5 (lower is better)
Translates to: FVVHTHSPGHCPLRR*LSSGQAPAAAPLHS
Trigger: GCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTATGGACAACGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS GCA 90 bp GTATTTAAGCAGATTAACTATCATGGTCACTGGGTAGGTGGCGGCTaGGGGCCAGGAACAGGCCCATGCGCGCAGCGGCGCCAGCCGCGC +
Preference number: 5 (lower is better)
Translates to: VFKQINYHGHWVGGG*GPGTGPCAQRRQPR
Trigger: GCGCGGCTGGCGCCGCTGCGCGCATGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCATGATAGTTAATCTGCTTAAATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674250.1
CDS-3UTR CAA 90 bp TTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCGCTCCACAGCCATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 5 (lower is better)
Translates to: FAGDFPLVRLRQQPRSTAITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...GGCTGTGGAGCGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp CAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGCAGAGGGCAGTGTGGGGATaGGCATTCACCACTCATCCG +
Preference number: 5 (lower is better)
Translates to: QAIAPFAGDFPLVRLRQQRAVWG*AFTTHP
Trigger: CGGATGAGTGGTGAATGCCAATCCCCACACTGCCCT...CTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp TCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCAGGGCAGTGTGGGGATaGGCATTCACCACTCATCCG +
Preference number: 5 (lower is better)
Translates to: SPMQTRFHSQPQFQHHSSRAVWG*AFTTHP
Trigger: CGGATGAGTGGTGAATGCCAATCCCCACACTGCCCT...GCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp CCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTAGGGAGCCACCTGATTaGTCGCATCGGGCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: PHADAVPLAATVPAPLEPREPPD*SHRASV
Trigger: TACACTGGCCCGATGCGACAAATCAGGTGGCTCCCT...AGGCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CAA 90 bp ACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCAGGGCAGTGTGGGGATaGGCATTCACCACTCATCCG +
Preference number: 5 (lower is better)
Translates to: TSNQWSPMQTRFHSQPQFRAVWG*AFTTHP
Trigger: CGGATGAGTGGTGAATGCCAATCCCCACACTGCCCT...GAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp AGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 5 (lower is better)
Translates to: SGPPCRRGSTRSHSSSTTITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...AGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp GGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGACAGCGGGGACAGGGCTaGGTGGTTTTCTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: GPPCRRGSTRSHSSSTTRQRGQG*VVFLMV
Trigger: AACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTG...TCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp ACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCAGAGCTCCCTGGGACTaGCAGATTGGACAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: TSNQWSPMQTRFHSQPQFRAPWD*QIGQRG
Trigger: CCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCT...GAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CAA 90 bp CAGCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGCCTGTCACAGGTCTGTaGTCACCGTGGGGCCATGTT +
Preference number: 5 (lower is better)
Translates to: QPQFQHHSSLHWGCGHFMPVTGL*SPWGHV
Trigger: AACATGGCCCCACGGTGACAACAGACCTGTGACAGG...CATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS GCA 90 bp GACCCTGGACTTCCAGCTGGTGGTGAGTCCTTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCCACAGAGTCTCCTGGGAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: DPGLPAGGESFLLSV*RMTASPTESPGRTE
Trigger: CTCAGTCCTCCCAGGAGACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGTCCAGGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS GCA 90 bp CCTGCTGGACTTCCAGCTGGTGGTGAGTCCTTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCCACAGAGTCTCCTGGGAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: PAGLPAGGESFLLSV*RMTASPTESPGRTE
Trigger: CTCAGTCCTCCCAGGAGACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGTCCAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000366892.5
ENST00000366897.5
ENST00000366898.6
ENST00000479615.5
ENST00000673871.1
ENST00000674232.1
ENST00000674501.1
CDS CCA 90 bp GAGTCAAGCTCTGGGGCTCCCGCTCACAGCCTCCCGCCGCGTTTCTaGGGTCGTCGCCTCCAGTTGCATTCATTTCTTGACCTTTTCTCC +
Preference number: 5 (lower is better)
Translates to: ESSSGAPAHSLPPRF*GRRLQLHSFLDLFS
Trigger: GGAGAAAAGGTCAAGAAATGAATGCAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAGGCTGTGAGCGGGAGCCCCAGAGCTTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366897.5
ENST00000366898.6
ENST00000479615.5
ENST00000612540.1
ENST00000615065.1
ENST00000673871.1
ENST00000674232.1
ENST00000674501.1
CDS-3UTR CAA 90 bp CCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: PQPRPLPPSQVTFLWSGSATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...GGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp CGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RTSGPPCRRGSTRSHSSSATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...GCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp CCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTG +
Preference number: 5 (lower is better)
Translates to: PTAQAIAPFAGDFPLVRLQGVAK*RVVNKL
Trigger: CAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTG...GAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp CTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCTCTCGGGGTTTCATCATCTaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: LSMDTSHWVQGAHACHLSRGFII*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAAGATGATGAAACCCCG...AGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS CCA 90 bp GCCAAGCATTGCGGAGCAGCACAAAGGGCGTGGCTGGGGAAGGGTTaGGAGAACAGGGAATCACTCTCACACCCAAGAGTGCATGGAGCA +
Preference number: 5 (lower is better)
Translates to: AKHCGAAQRAWLGKG*ENRESLSHPRVHGA
Trigger: TGCTCCATGCACTCTTGGGTGTGAGAGTGATTCCCTGTTCTCCCAACCCTTCCCCAGCCACGCCCTTTGTGCTGCTCCGCAATGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CCA 90 bp TTTCCTCCCGAGCCAAGCATTGCGGAGCAGCACAAAGGGCGTGGCTaGGGAAGGGTTGGGAGAACAGGGAATCACTCTCACACCCAAGAG +
Preference number: 5 (lower is better)
Translates to: FPPEPSIAEQHKGRG*GRVGRTGNHSHTQE
Trigger: CTCTTGGGTGTGAGAGTGATTCCCTGTTCTCCCAACCCTTCCCCAGCCACGCCCTTTGTGCTGCTCCGCAATGCTTGGCTCGGGAGGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CCA 90 bp ACAGTTTCCTCCCGAGCCAAGCATTGCGGAGCAGCACAAAGGGCGTaGCTGGGGAAGGGTTGGGAGAACAGGGAATCACTCTCACACCCA +
Preference number: 5 (lower is better)
Translates to: TVSSRAKHCGAAQRA*LGKGWENRESLSHP
Trigger: TGGGTGTGAGAGTGATTCCCTGTTCTCCCAACCCTTCCCCAGCCACGCCCTTTGTGCTGCTCCGCAATGCTTGGCTCGGGAGGAAACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS-3UTR CAA 90 bp GGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGGTCGTCGCCTCCAGTaGCATTCATTTCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: GPPCRRGSTRSHSSSTTRGRRLQ*HSFLDL
Trigger: AAGGTCAAGAAATGAATGCAACTGGAGGCGACGACC...TCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp GGGGATCCTAGGGTGCCTGAGCTCATGGGAGCAAACCTTGTTCAGGCACCGCAAAGGGCAGTGTGGGGATaGGCATTCACCACTCATCCG +
Preference number: 5 (lower is better)
Translates to: GDPRVPELMGANLVQAPQRAVWG*AFTTHP
Trigger: CGGATGAGTGGTGAATGCCAATCCCCACACTGCCCT...TTGCGGTGCCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCCTAGGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: ATVPAPLEPALGLRTLHVATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...CACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 5 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGCCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTG +
Preference number: 5 (lower is better)
Translates to: GGCFPTSLLGGSFIDSVGQGVAK*RVVNKL
Trigger: CAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTG...GCCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCTCTCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTG +
Preference number: 5 (lower is better)
Translates to: LSMDTSHWVQGAHACHLSQGVAK*RVVNKL
Trigger: CAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTG...AGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTG +
Preference number: 5 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQQGVAK*RVVNKL
Trigger: CAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTG...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp GAAGGCAAACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGTCCCGGCTGCACTCTTaGACAGGGGCCTTTGCAATA +
Preference number: 5 (lower is better)
Translates to: EGKPTAQAIAPFAGDFPLSRLHS*TGAFAI
Trigger: TATTGCAAAGGCCCCTGTCAAAGAGTGCAGCCGGGA...CAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS-3UTR CAA 90 bp CACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCATCCCGGCTGCACTCTTaGACAGGGGCCTTTGCAATA +
Preference number: 5 (lower is better)
Translates to: HSSSTTRACTGAADTSCASRLHS*TGAFAI
Trigger: TATTGCAAAGGCCCCTGTCAAAGAGTGCAGCCGGGA...TGCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp GGGGATCCTAGGGTGCCTGAGCTCATGGGAGCAAACCTTGTTCAGGCACCGCAAAGGGAGCCACCTGATTaGTCGCATCGGGCCAGTGTA +
Preference number: 5 (lower is better)
Translates to: GDPRVPELMGANLVQAPQREPPD*SHRASV
Trigger: TACACTGGCCCGATGCGACAAATCAGGTGGCTCCCT...TTGCGGTGCCTGAACAAGGTTTGCTCCCATGAGCTCAGGCACCCTAGGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS GCA 90 bp TTACCTGGACTTCCAGCTGGTGGTGAGTCCTTCCTGCTGTCAGTGTaGAGAATGACAGCCAGCCCCACAGAGTCTCCTGGGAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: LPGLPAGGESFLLSV*RMTASPTESPGRTE
Trigger: CTCAGTCCTCCCAGGAGACTCTGTGGGGCTGGCTGTCATTCTGCACACTGACAGCAGGAAGGACTCACCACCAGCTGGAAGTCCAGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615065.1
CDS CCA 90 bp TGGTCAGCCGGAACCCCCTGTCGCTTAGCAACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAATCGACCTCCACTGGGAAACCATGG +
Preference number: 5 (lower is better)
Translates to: WSAGTPCRLATTSLS*KMLVSESTSTGKPW
Trigger: CCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGTTGCTAAGCGACAGGGGGTTCCGGCTGACCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366894.6
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000648830.1
ENST00000673871.1
ENST00000674232.1
ENST00000674259.1
ENST00000674493.1
ENST00000674501.1
CDS CCA 90 bp GTCCAGTCATTCCTCAGCTCCTTCCCTGCGAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGTCGCTTAGCAACCACCTCCTTGAGC +
Preference number: 5 (lower is better)
Translates to: VQSFLSSFPAKITRN*SAGTPCRLATTSLS
Trigger: GCTCAAGGAGGTGGTTGCTAAGCGACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTTCGCAGGGAAGGAGCTGAGGAATGACTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366894.6
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000648830.1
ENST00000673871.1
ENST00000674232.1
ENST00000674259.1
ENST00000674493.1
ENST00000674501.1
CDS-3UTR CAA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGGGTCGTCGCCTCCAGTaGCATTCATTTCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQGRRLQ*HSFLDL
Trigger: AAGGTCAAGAAATGAATGCAACTGGAGGCGACGACC...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTAAGGGCAGTGTGGGGATaGGCATTCACCACTCATCCG +
Preference number: 5 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVRAVWG*AFTTHP
Trigger: CGGATGAGTGGTGAATGCCAATCCCCACACTGCCCT...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 5 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGTACTGCTGGTACCGGTaGTACTGCTCTTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: WRLLPNEPARRLFHRLCRYCWYR*YCSSPR
Trigger: TCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA...CCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGACAGCGGGGACAGGGCTaGGTGGTTTTCTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRQRGQG*VVFLMV
Trigger: AACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTG...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTCAGTATGGACACGAGCCACTGGGTGCAGGGGGCTCATGCCTGCCACCTCTCTGTAAGAGCATGCGGTTaGCCGCATGCAGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: LSMDTSHWVQGAHACHLSVRACG*PHAVLL
Trigger: TAACAACACTGCATGCGGCAAACCGCATGCTCTTAC...AGAGAGGTGGCAGGCATGAGCCCCCTGCACCCAGTGGCTCGTGTCCATACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTACCTGTCACAGGTCTGTaGTCACCGTGGGGCCATGTT +
Preference number: 5 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVPVTGL*SPWGHV
Trigger: AACATGGCCCCACGGTGACAACAGACCTGTGACAGG...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS TCA 90 bp CGTTTCCCAGAGCCTCAGGTATACCCGCCTCCATTACAGCGGTCCTaGGGCAGGGGTCTCTGGGCCATTATTGCTTTTGCTGTCAGTACC +
Preference number: 5 (lower is better)
Translates to: RFPEPQVYPPPLQRS*GRGLWAIIAFAVST
Trigger: GGTACTGACAGCAAAAGCAATAATGGCCCAGAGACCCCTGCCTCAGGACCGCTGTAATGGAGGCGGGTATACCTGAGGCTCTGGGAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CCA 90 bp GGATCCACTGAGCAGATGTCACAGGAACTCGCTGGCAAGGGCATCTaGGAAATACAGTTTCCTCCCGAGCCAAGCATTGCGGAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GSTEQMSQELAGKGI*EIQFPPEPSIAEQH
Trigger: GTGCTGCTCCGCAATGCTTGGCTCGGGAGGAAACTGTATTTCCCAGATGCCCTTGCCAGCGAGTTCCTGTGACATCTGCTCAGTGGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CCA 90 bp GTAGAAACCACCAAGGCACTGCCTCCCAGTCACGGAGGAGTGGCATaGAGAAGGGATCACAGACACTTCCAGAAGCAGGAGAGAGGGAAG +
Preference number: 5 (lower is better)
Translates to: VETTKALPPSHGGVA*RRDHRHFQKQERGK
Trigger: CTTCCCTCTCTCCTGCTTCTGGAAGTGTCTGTGATCCCTTCTCCATGCCACTCCTCCGTGACTGGGAGGCAGTGCCTTGGTGGTTTCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS-3UTR CAA 90 bp GAAGGCAAACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTGACTTTCCTCTGGGTCGTCGCCTCCAGTaGCATTCATTTCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: EGKPTAQAIAPFAGDFPLGRRLQ*HSFLDL
Trigger: AAGGTCAAGAAATGAATGCAACTGGAGGCGACGACC...CAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338468.8
CDS-3UTR CAA 90 bp CCCCATGCAGACGCGGTTCCACTCGCAGCCACAGTTCCAGCACCACTCGAGCCTCACCACTCATCCGGTTaGGAATTAAAACATCATCCC +
Preference number: 5 (lower is better)
Translates to: PHADAVPLAATVPAPLEPHHSSG*ELKHHP
Trigger: GGGATGATGTTTTAATTCCAAACCGGATGAGTGGTG...AGGCTCGAGTGGTGCTGGAACTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp AGGACACACTCCTCTGCACCATACTGCTGGTACCGGTTGTACTGCTCTTCTCCCATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 5 (lower is better)
Translates to: RTHSSAPYCWYRLYCSSPITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...GGGAGAAGAGCAGTACAACCGGTACCAGCAGTATGGTGCAGAGGAGTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTATCCCGGCTGCACTCTTaGACAGGGGCCTTTGCAATA +
Preference number: 5 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVSRLHS*TGAFAI
Trigger: TATTGCAAAGGCCCCTGTCAAAGAGTGCAGCCGGGA...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGATCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRSVLWY*CHPEAE
Trigger: CTCAGCCTCCGGATGACACAAATACCAGAGCACAGA...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGAAACCATGGCTGGAGTaGAACCTGACAAACACTATC +
Preference number: 5 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQKPWLE*NLTNTI
Trigger: GATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTT...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp TACACGTCGAACCAGTGGTCCCCCATGCAGACGCGGTTCCACTCGCAGCCACAGCACCACTCATCCGGTTaGGAATTAAAACATCATCCC +
Preference number: 5 (lower is better)
Translates to: YTSNQWSPMQTRFHSQPQHHSSG*ELKHHP
Trigger: GGGATGATGTTTTAATTCCAAACCGGATGAGTGGTG...CTGTGGCTGCGAGTGGAACCGCGTCTGCATGGGGGACCACTGGTTCGACGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp GCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGTGTTCCGACTATTTGTaGCGATCAGGTGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: ATVPAPLEPALGLRTLHVCSDYL*RSGAKL
Trigger: TAGCTTTGCACCTGATCGCAACAAATAGTCGGAACA...CACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 5 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGTACTGCTGGTACCGGTaGTACTGCTCTTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRYCWYR*YCSSPR
Trigger: TCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGTTCTTGATGGTTTCTTaGGAGGCTGCTTCCCAACGA +
Preference number: 5 (lower is better)
Translates to: WRLLPNEPARRLFHRLCRFLMVS*EAASQR
Trigger: TCGTTGGGAAGCAGCCTCCAAAGAAACCATCAAGAA...CCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCTTCTTGATGGTTTCTTaGGAGGCTGCTTCCCAACGA +
Preference number: 5 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVFLMVS*EAASQR
Trigger: TCGTTGGGAAGCAGCCTCCAAAGAAACCATCAAGAA...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTCCTGGGGAACCCCTGGTATGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGGGCGTGTCTTCATTTaGGTAGTTCTGGAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: LLGNPWYAELPGTCRLDRGRVFI*VVLERL
Trigger: GAGCCTTTCCAGAACTACCAAAATGAAGACACGCCC...TCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCATACCAGGGGTTCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS GCA 90 bp GCCTCCATTACAGCGGTCCTGAGGCAGGGGTCTCTGGGCCATTATTaGTTTTGCTGTCAGTACCTGGTAAGCTCGCGTTTGAATGTCCCT +
Preference number: 5 (lower is better)
Translates to: ASITAVLRQGSLGHY*FCCQYLVSSRLNVP
Trigger: AGGGACATTCAAACGCGAGCTTACCAGGTACTGACAGCAAAAGCAATAATGGCCCAGAGACCCCTGCCTCAGGACCGCTGTAATGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS GCA 90 bp GTTCTGGAAACTAGAAACACTTCCCTGTGTGTCATGCTGCGACGGTaGCATGTCACGCAGCCCACTGGAGTGGCGTGTGAGGTAATGACA +
Preference number: 5 (lower is better)
Translates to: VLETRNTSLCVMLRR*HVTQPTGVACEVMT
Trigger: TGTCATTACCTCACACGCCACTCCAGTGGGCTGCGTGACATGGCACCGTCGCAGCATGACACACAGGGAAGTGTTTCTAGTTTCCAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS GCA 90 bp TCAGAAATGTTCTGGAAACTAGAAACACTTCCCTGTGTGTCATGCTaGGACGGTGCCATGTCACGCAGCCCACTGGAGTGGCGTGTGAGG +
Preference number: 5 (lower is better)
Translates to: SEMFWKLETLPCVSC*DGAMSRSPLEWRVR
Trigger: CCTCACACGCCACTCCAGTGGGCTGCGTGACATGGCACCGTCGCAGCATGACACACAGGGAAGTGTTTCTAGTTTCCAGAACATTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 90 bp GGTCCTGGTGAGAAGACTATTGCTAGGAGGCATCTGGCTGGCTGGTaGCTGCTCATATCCTACGCATACCCACCTGACAGATCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: GPGEKTIARRHLAGW*LLISYAYPPDRSPL
Trigger: AAGAGGAGATCTGTCAGGTGGGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCTTCTCACCAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674176.1
CDS CCA 90 bp TCAGGTCCTGGTGAGAAGACTATTGCTAGGAGGCATCTGGCTGGCTaGTGGCTGCTCATATCCTACGCATACCCACCTGACAGATCTCCT +
Preference number: 5 (lower is better)
Translates to: SGPGEKTIARRHLAG*WLLISYAYPPDRSP
Trigger: AGGAGATCTGTCAGGTGGGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCTTCTCACCAGGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674176.1
CDS-3UTR CAA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTCTGTAGGTGTTCCGACTATTTGTaGCGATCAGGTGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: WRLLPNEPARRLFHRLCRCSDYL*RSGAKL
Trigger: TAGCTTTGCACCTGATCGCAACAAATAGTCGGAACA...CCTACAGAGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCTGTTCCGACTATTTGTaGCGATCAGGTGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVCSDYL*RSGAKL
Trigger: TAGCTTTGCACCTGATCGCAACAAATAGTCGGAACA...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GGGCCTCCATGTGCTAGTGAGACTCATGCCCTCAGTTATGTTCACGATCTTCCTATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 5 (lower is better)
Translates to: GPPCASETHALSYVHDLPITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...AGGAAGATCGTGAACATAACTGAGGGCATGAGTCTCACTAGCACATGGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GCCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGACAAACTGCCGATCATaGAGTCTTGTCACACAGTAT +
Preference number: 5 (lower is better)
Translates to: ATVPAPLEPALGLRTLHVTNCRS*SLVTQY
Trigger: ATACTGTGTGACAAGACTCAATGATCGGCAGTTTGT...CACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000479615.5
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCCAGCGGGGACAGGGCTaGGTGGTTTTCTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSQRGQG*VVFLMV
Trigger: AACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTG...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS TCA 90 bp AGAGAAAATGACAGCGCCTTTCCCCTGACCTGCCTTTGGATCCACTaGGCAGATGTCACAGGAACTCGCTGGCAAGGGCATCTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: RENDSAFPLTCLWIH*ADVTGTRWQGHLGN
Trigger: ATTTCCCAGATGCCCTTGCCAGCGAGTTCCTGTGACATCTGCTCAGTGGATCCAAAGGCAGGTCAGGGGAAAGGCGCTGTCATTTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS TCA 90 bp GTATCCGGAGCCCTGCTTGGAGGAATGAGTAGGGCATTCTGTACCTaGGTAGTTGTTCCTGAGGCTTCAAATACGGCACTGCACTCCCCT +
Preference number: 5 (lower is better)
Translates to: VSGALLGGMSRAFCT*VVVPEASNTALHSP
Trigger: AGGGGAGTGCAGTGCCGTATTTGAAGCCTCAGGAACAACTACTCAGGTACAGAATGCCCTACTCATTCCTCCAAGCAGGGCTCCGGATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS GCA 90 bp CTGGTGAGAAGACTATTGCTAGGAGGCATCTGGCTGGCTGGTGGCTaGTCATATCCTACGCATACCCACCTGACAGATCTCCTCTTGGTT +
Preference number: 5 (lower is better)
Translates to: LVRRLLLGGIWLAGG*SYPTHTHLTDLLLV
Trigger: AACCAAGAGGAGATCTGTCAGGTGGGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCTTCTCACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674176.1
CDS GCA 90 bp GTTTCAGAAATGTTCTGGAAACTAGAAACACTTCCCTGTGTGTCATaGTGCGACGGTGCCATGTCACGCAGCCCACTGGAGTGGCGTGTG +
Preference number: 5 (lower is better)
Translates to: VSEMFWKLETLPCVS*CDGAMSRSPLEWRV
Trigger: CACACGCCACTCCAGTGGGCTGCGTGACATGGCACCGTCGCAGCATGACACACAGGGAAGTGTTTCTAGTTTCCAGAACATTTCTGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 90 bp CACCTCCTTGAGCTGGAAGATGCTGGTGTCAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTTGAACCTGACAAACAGGACAGAAGC +
Preference number: 5 (lower is better)
Translates to: HLLELEDAGVRIDLH*ETMAGVEPDKQDRS
Trigger: GCTTCTGTCCTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTCAAGGAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648830.1
CDS CCA 90 bp GGTCCTGGTGAGAAGACTATTGCTAGGAGGCATCTGGCTGGCTGGTaGCTGCTCATATCCTACGCATACCCACCTGACAGATCTCTATCA +
Preference number: 5 (lower is better)
Translates to: GPGEKTIARRHLAGW*LLISYAYPPDRSLS
Trigger: TGATAGAGATCTGTCAGGTGGGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCTTCTCACCAGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674395.1
CDS CCA 90 bp TCAGGTCCTGGTGAGAAGACTATTGCTAGGAGGCATCTGGCTGGCTaGTGGCTGCTCATATCCTACGCATACCCACCTGACAGATCTCTA +
Preference number: 5 (lower is better)
Translates to: SGPGEKTIARRHLAG*WLLISYAYPPDRSL
Trigger: TAGAGATCTGTCAGGTGGGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCTTCTCACCAGGACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674395.1
CDS-3UTR CAA 90 bp GTTTCTTTGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTTTCTTGATGGTTTCTTaGGAGGCTGCTTCCCAACGA +
Preference number: 5 (lower is better)
Translates to: VSLEAASQRACSAALSSTFLMVS*EAASQR
Trigger: TCGTTGGGAAGCAGCCTCCAAAGAAACCATCAAGAA...AGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGCAAACCTTGTTCAGGCACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGTTCTTGATGGTTTCTTaGGAGGCTGCTTCCCAACGA +
Preference number: 5 (lower is better)
Translates to: EQTLFRHRKPNAACRLGRFLMVS*EAASQR
Trigger: TCGTTGGGAAGCAGCCTCCAAAGAAACCATCAAGAA...CCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTGCCTGAACAAGGTTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAACAGCGGGGACAGGGCTaGGTGGTTTTCTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: ECVCARARVCVCLKRELEQRGQG*VVFLMV
Trigger: AACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTG...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGTCCCGGCTGCACTCTTaGACAGGGGCCTTTGCAATA +
Preference number: 5 (lower is better)
Translates to: ASNTALHSPSWYASLHSRSRLHS*TGAFAI
Trigger: TATTGCAAAGGCCCCTGTCAAAGAGTGCAGCCGGGA...CCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCGGGCGTGTCTTCATTTaGGTAGTTCTGGAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELGRVFI*VVLERL
Trigger: GAGCCTTTCCAGAACTACCAAAATGAAGACACGCCC...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTCATGGGAGCAAACCTaGTTCAGGCACCGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGSWEQT*FRHRKP
Trigger: GGGCTTGCGGTGCCTGAACAAGGTTTGCTCCCATGA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS GCA 90 bp ATTACAGCGGTCCTGAGGCAGGGGTCTCTGGGCCATTATTGCTTTTaGTGTCAGTACCTGGTAAGCTCGCGTTTGAATGTCCCTGAGCTA +
Preference number: 5 (lower is better)
Translates to: ITAVLRQGSLGHYCF*CQYLVSSRLNVPEL
Trigger: TAGCTCAGGGACATTCAAACGCGAGCTTACCAGGTACTGACAGCAAAAGCAATAATGGCCCAGAGACCCCTGCCTCAGGACCGCTGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS GCA 90 bp CTGGTGAGAAGACTATTGCTAGGAGGCATCTGGCTGGCTGGTGGCTaGTCATATCCTACGCATACCCACCTGACAGATCTCTATCATGGT +
Preference number: 5 (lower is better)
Translates to: LVRRLLLGGIWLAGG*SYPTHTHLTDLYHG
Trigger: ACCATGATAGAGATCTGTCAGGTGGGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCTTCTCACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674395.1
CDS CCA 90 bp AGCTGGAAGATGCTGGTGTCAGAATCGACCTCCACTGGGAAACCATaGCTGGAGTTGAACCTGACAAACAGGACAGAAGCCATGTCTCAG +
Preference number: 5 (lower is better)
Translates to: SWKMLVSESTSTGKP*LELNLTNRTEAMSQ
Trigger: CTGAGACATGGCTTCTGTCCTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648830.1
CDS-3UTR CAA 90 bp CAGTCTAAGCAAATCACGTGGCGGGAGTTGCACTGGAAAACCAGGACGGGGCTCAAACCATGGCTGGAGTaGAACCTGACAAACACTATC +
Preference number: 5 (lower is better)
Translates to: QSKQITWRELHWKTRTGLKPWLE*NLTNTI
Trigger: GATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTT...GAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTACACCACTCATCCGGTTaGGAATTAAAACATCATCCC +
Preference number: 5 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVHHSSG*ELKHHP
Trigger: GGGATGATGTTTTAATTCCAAACCGGATGAGTGGTG...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTG +
Preference number: 5 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACQGVAK*RVVNKL
Trigger: CAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTG...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGACAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTG +
Preference number: 5 (lower is better)
Translates to: QIRHCTPLHGTLLYIPGRQGVAK*RVVNKL
Trigger: CAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTG...TCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGTACTGCTGGTACCGGTaGTACTGCTCTTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: SNTALHSPSWYASLHSRQYCWYR*YCSSPR
Trigger: TCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA...CTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCATCAGGAAGATCCCGGCTGCACTCTTaGACAGGGGCCTTTGCAATA +
Preference number: 5 (lower is better)
Translates to: PTQHADWEGAIMQTPSGRSRLHS*TGAFAI
Trigger: TATTGCAAAGGCCCCTGTCAAAGAGTGCAGCCGGGA...TCTTCCTGATGGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCTCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACSVLWY*CHPEAE
Trigger: CTCAGCCTCCGGATGACACAAATACCAGAGCACAGA...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAATCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ECVCARARVCVCLKRELESVLWY*CHPEAE
Trigger: CTCAGCCTCCGGATGACACAAATACCAGAGCACAGA...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GCTTCAAATACGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGTCTGTGCTCTGGTATTaGTGTCATCCGGAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: ASNTALHSPSWYASLHSRSVLWY*CHPEAE
Trigger: CTCAGCCTCCGGATGACACAAATACCAGAGCACAGA...CCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CAA 90 bp GTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTGTCGCAGATGGCTCTGCTGTCATACATGGATTGCACTaGAATCTGTGCTCTGGTATT +
Preference number: 5 (lower is better)
Translates to: VIRRLRTPVGGVADGSAVIHGLH*NLCSGI
Trigger: AATACCAGAGCACAGATTCAAGTGCAATCCATGTAT...GACAGCAGAGCCATCTGCGACACCACCAACAGGCGTTCTCAGCCTCCGGATGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GACCATGCTGGACAGCCTAATAGTCTAACAGGGGATCCTAGGGTGCCTGAGCTCCAGGATGTGGAAAACTaGAGTTCATCCCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: DHAGQPNSLTGDPRVPELQDVEN*SSSPLF
Trigger: GAAGAGAGGGGATGAACTCAAGTTTTCCACATCCTG...GAGCTCAGGCACCCTAGGATCCCCTGTTAGACTATTAGGCTGTCCAGCATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTCACCGTGGGGCCATGTaGGAGTCGGTAGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGHRGAM*ESVDFQ
Trigger: CTGAAAATCTACCGACTCCAACATGGCCCCACGGTG...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CCACAGTTCCAGCACCACTCGAGCCTGCACTGGGGCTGCGGACACTTCATGTGCCTTACTATAGAGACTTaGATCTGTCCACCATTTCTA +
Preference number: 5 (lower is better)
Translates to: PQFQHHSSLHWGCGHFMCLTIET*ICPPFL
Trigger: TAGAAATGGTGGACAGATCAAAGTCTCTATAGTAAG...GCACATGAAGTGTCCGCAGCCCCAGTGCAGGCTCGAGTGGTGCTGGAACTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CAA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCACACTAAGTCAGGCCTaGATCAGGGTCTGGACTCAG +
Preference number: 5 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACTLSQA*IRVWTQ
Trigger: CTGAGTCCAGACCCTGATCAAGGCCTGACTTAGTGT...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS CCA 90 bp CACCTCCTTGAGCTGGAAGATGCTGGTGTCAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTTGAACCTGACAAACACTATCATGGT +
Preference number: 5 (lower is better)
Translates to: HLLELEDAGVRIDLH*ETMAGVEPDKHYHG
Trigger: ACCATGATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTCAAGGAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366892.5
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000674232.1
ENST00000674493.1
ENST00000674501.1
CDS CCA 90 bp GTAGTTGTTCCTGAGGCTTCAAATACGGCACTGCACTCCCCTTCATaGTACGCTTCTTTACATTCCCGGCAGAAGGCAAACCACACAAGG +
Preference number: 5 (lower is better)
Translates to: VVVPEASNTALHSPS*YASLHSRQKANHTR
Trigger: CCTTGTGTGGTTTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCGTATTTGAAGCCTCAGGAACAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479615.5
CDS CCA 90 bp GGAGAAGGAGGAGCTGAAGTAAACACCCCCATCCTTGTCAGTCTTTaGTTAAAGACTCTCCTAGGGGTATGTAAGTCACCAGGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: GEGGAEVNTPILVSL*LKTLLGVCKSPGEA
Trigger: AGCCTCGCCTGGTGACTTACATACCCCTAGGAGAGTCTTTAACCAAAGACTGACAAGGATGGGGGTGTTTACTTCAGCTCCTCCTTCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 90 bp AAACAGATTGTGCTCGTCTTGCTTAGGGCCAACAGGCGCACTGCATaGAACTCAGCCAGCTTCAGTCACAAAGCTCACTTAGGAGTTCTG +
Preference number: 5 (lower is better)
Translates to: KQIVLVLLRANRRTA*NSASFSHKAHLGVL
Trigger: CAGAACTCCTAAGTGAGCTTTGTGACTGAAGCTGGCTGAGTTCCATGCAGTGCGCCTGTTGGCCCTAAGCAAGACGAGCACAATCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674353.1
CDS-3UTR CAA 90 bp CGGCACTGCACTCCCCTTCATGGTACGCTTCTTTACATTCCCGGCAGAAGGCAATGTTCCGACTATTTGTaGCGATCAGGTGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: RHCTPLHGTLLYIPGRRQCSDYL*RSGAKL
Trigger: TAGCTTTGCACCTGATCGCAACAAATAGTCGGAACA...TTGCCTTCTGCCGGGAATGTAAAGAAGCGTACCATGAAGGGGAGTGCAGTGCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000338468.8
ENST00000366894.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TGCAGAGCTCCCTGGGACTTGCAGATTGGACAGAGAGGGTGTGCCAAAGGGGTAACAAACTGCCGATCATaGAGTCTTGTCACACAGTAT +
Preference number: 5 (lower is better)
Translates to: CRAPWDLQIGQRGCAKGVTNCRS*SLVTQY
Trigger: ATACTGTGTGACAAGACTCAATGATCGGCAGTTTGT...TACCCCTTTGGCACACCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp AAGAAAAATTCTGCACTAGTCCCAGGGCAGTGTGGGGATTGGCATTCACCACTCTACTGCTGGTACCGGTaGTACTGCTCTTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: KKNSALVPGQCGDWHSPLYCWYR*YCSSPR
Trigger: TCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA...GAGTGGTGAATGCCAATCCCCACACTGCCCTGGGACTAGTGCAGAATTTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp GAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAACCCCTGGTATGCAGAGCAGCCATGAATCTAGTTaGGAGAACCCACTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: EFTVLREGLSWGTPGMQSSHESS*ENPLQF
Trigger: GAACTGCAGTGGGTTCTCCAAACTAGATTCATGGCT...GCTCTGCATACCAGGGGTTCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTTTCTTTGGAGGCTGCTTCCCAACGAGCCTGCTCGGCGGCTCTTTCATCGACTACTGTCCTCAGATGGTaGGAAGAAATGGGTTATCTT +
Preference number: 5 (lower is better)
Translates to: VSLEAASQRACSAALSSTTVLRW*EEMGYL
Trigger: AAGATAACCCATTTCTTCCAACCATCTGAGGACAGT...AGTCGATGAAAGAGCCGCCGAGCAGGCTCGTTGGGAAGCAGCCTCCAAAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000673871.1
CDS-3UTR CAA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTACACTAAGTCAGGCCTaGATCAGGGTCTGGACTCAG +
Preference number: 5 (lower is better)
Translates to: DWTERVCQRGINPSDGESTLSQA*IRVWTQ
Trigger: CTGAGTCCAGACCCTGATCAAGGCCTGACTTAGTGT...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAACGCAGCATGCAGATaGGGAAGGCGCAATAATGCA +
Preference number: 5 (lower is better)
Translates to: GAMLESVDFQTVKPHEAVNAACR*GRRNNA
Trigger: TGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTT...CACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATTCATGGGAGCAAACCTaGTTCAGGCACCGCAAGCCC +
Preference number: 5 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNSWEQT*FRHRKP
Trigger: GGGCTTGCGGTGCCTGAACAAGGTTTGCTCCCATGA...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS TCA 90 bp CGTTTGGGGGATGGGCAGATGATGAGAGTTGGGAGAAGGAGGAGCTaGAGTAAACACCCCCATCCTTGTCAGTCTTTGGTTAAAGACTCT +
Preference number: 5 (lower is better)
Translates to: RLGDGQMMRVGRRRS*SKHPHPCQSLVKDS
Trigger: AGAGTCTTTAACCAAAGACTGACAAGGATGGGGGTGTTTACTTCAGCTCCTCCTTCTCCCAACTCTCATCATCTGCCCATCCCCCAAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 90 bp AGTCTTGTCACACAGTATAAGTGGAAACAGTCTAAGCAAATCACGTaGCGGGAGTTGCACTGGAAAACCAGGACGGGGCTCCTTGCAAGA +
Preference number: 5 (lower is better)
Translates to: SLVTQYKWKQSKQIT*RELHWKTRTGLLAR
Trigger: TCTTGCAAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGACAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674006.1
CDS-3UTR CAA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTGGTCGTCGCCTCCAGTaGCATTCATTTCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGGRRLQ*HSFLDL
Trigger: AAGGTCAAGAAATGAATGCAACTGGAGGCGACGACC...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGAGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: RELENEGRHWVCSPRMWRATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATCAGCGGGGACAGGGCTaGGTGGTTTTCTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNQRGQG*VVFLMV
Trigger: AACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTG...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAAAGCCATGAATCTAGTTaGGAGAACCCACTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: ECVCARARVCVCLKRELESHESS*ENPLQF
Trigger: GAACTGCAGTGGGTTCTCCAAACTAGATTCATGGCT...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTGTAAGAGCATGCGGTTaGCCGCATGCAGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: DWTERVCQRGINPSDGESVRACG*PHAVLL
Trigger: TAACAACACTGCATGCGGCAAACCGCATGCTCTTAC...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTGTAAGAGCATGCGGTTaGCCGCATGCAGTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGVRACG*PHAVLL
Trigger: TAACAACACTGCATGCGGCAAACCGCATGCTCTTAC...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CACCGCAAGCCCAACGCAGCATGCAGATTGGGAAGGCGCAATAATGCAAACACCACTGTCCTCAGATGGTaGGAAGAAATGGGTTATCTT +
Preference number: 5 (lower is better)
Translates to: HRKPNAACRLGRRNNANTTVLRW*EEMGYL
Trigger: AAGATAACCCATTTCTTCCAACCATCTGAGGACAGT...GGTGTTTGCATTATTGCGCCTTCCCAATCTGCATGCTGCGTTGGGCTTGCGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAACACCGTGGGGCCATGTaGGAGTCGGTAGATTTTCAG +
Preference number: 5 (lower is better)
Translates to: ERVGRVFILVVLERLLFKHRGAM*ESVDFQ
Trigger: CTGAAAATCTACCGACTCCAACATGGCCCCACGGTG...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGTGTGTGTGCGCGCGCGCGCGTGTGTGTGTGTGTTTGAAAAGAGAATTAGAAAAACCATGGCTGGAGTaGAACCTGACAAACACTATC +
Preference number: 5 (lower is better)
Translates to: ECVCARARVCVCLKRELEKPWLE*NLTNTI
Trigger: GATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTT...TTCTAATTCTCTTTTCAAACACACACACACACGCGCGCGCGCGCACACACACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CAA 90 bp GTTGTACTTTCTCTTCTGCGTAGTGTGGGTAAGAGCATGCGGTTTGCCGCATGCCACCACTCATCCGGTTaGGAATTAAAACATCATCCC +
Preference number: 5 (lower is better)
Translates to: VVLSLLRSVGKSMRFAACHHSSG*ELKHHP
Trigger: GGGATGATGTTTTAATTCCAAACCGGATGAGTGGTG...GCATGCGGCAAACCGCATGCTCTTACCCACACTACGCAGAAGAGAAAGTACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GGGGCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGTGTTCCGACTATTTGTaGCGATCAGGTGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: GAMLESVDFQTVKPHEAVCSDYL*RSGAKL
Trigger: TAGCTTTGCACCTGATCGCAACAAATAGTCGGAACA...CACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGAGCTCCCTGGGACTaGCAGATTGGACAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGRAPWD*QIGQRG
Trigger: CCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCT...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGAGAGCTCCCTGGGACTaGCAGATTGGACAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWRAPWD*QIGQRG
Trigger: CCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCT...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGAAGAGCTCCCTGGGACTaGCAGATTGGACAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGRAPWD*QIGQRG
Trigger: CCCTCTCTGTCCAATCTGCAAGTCCCAGGGAGCTCT...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS GCA 90 bp CCCAGTAAATGTCAATATGCTCCTATCATGTCCACACCTGTCATCTaGAGCACAAGTCAGTGTGATCTATCATGGTCACTGGGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: PSKCQYAPIMSTPVI*STSQCDLSWSLGRW
Trigger: CCACCTACCCAGTGACCATGATAGATCACACTGACTTGTGCTGCAGATGACAGGTGTGGACATGATAGGAGCATATTGACATTTACTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647006.2
ENST00000674224.1
CDS-3UTR CAA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTAAACCATGGCTGGAGTaGAACCTGACAAACACTATC +
Preference number: 5 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGKPWLE*NLTNTI
Trigger: GATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTT...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
CDS-3UTR CAA 90 bp ACGGGGCTCCTGACGTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTCACCACTCATCCGGTTaGGAATTAAAACATCATCCC +
Preference number: 5 (lower is better)
Translates to: TGLLTSVHVMQVMFRLFVHHSSG*ELKHHP
Trigger: GGGATGATGTTTTAATTCCAAACCGGATGAGTGGTG...AACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGCCCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp TTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGCTGAGAACGCCTGTTGGTTGTTCCGACTATTTGTaGCGATCAGGTGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: LNLCSGICVIRRLRTPVGCSDYL*RSGAKL
Trigger: TAGCTTTGCACCTGATCGCAACAAATAGTCGGAACA...ACCAACAGGCGTTCTCAGCCTCCGGATGACACAAATACCAGAGCACAGATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TGTTTCCTTGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATTCTGCACTCAGCGGGGACAGGGCTaGGTGGTTTTCTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: CFLVRGGVCSTFKEKFCTQRGQG*VVFLMV
Trigger: AACCATCAAGAAAACCACCAAGCCCTGTCCCCGCTG...AGTGCAGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp TTTCTATGTGAGCTTTGGGCTTCCTGTCACAGGTCTGTTGTCACCGTGGGGCCAATACATGGATTGCACTaGAATCTGTGCTCTGGTATT +
Preference number: 5 (lower is better)
Translates to: FLCELWASCHRSVVTVGPIHGLH*NLCSGI
Trigger: AATACCAGAGCACAGATTCAAGTGCAATCCATGTAT...TGGCCCCACGGTGACAACAGACCTGTGACAGGAAGCCCAAAGCTCACATAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GCCATGTTGGAGTCGGTAGATTTTCAGACAGTGAAGCCACATGAAGCTGTGAATGGGCGTGTCTTCATTTaGGTAGTTCTGGAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: AMLESVDFQTVKPHEAVNGRVFI*VVLERL
Trigger: GAGCCTTTCCAGAACTACCAAAATGAAGACACGCCC...ATTCACAGCTTCATGTGGCTTCACTGTCTGAAAATCTACCGACTCCAACATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp AGAGAATTAGAAAATGAAGGTAGACACTGGGTATGCTCCCCCAGGATGTGGCGATGTTCCGACTATTTGTaGCGATCAGGTGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: RELENEGRHWVCSPRMWRCSDYL*RSGAKL
Trigger: TAGCTTTGCACCTGATCGCAACAAATAGTCGGAACA...TCGCCACATCCTGGGGGAGCATACCCAGTGTCTACCTTCATTTTCTAATTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp ACAGATACATGGATTGCACTTGAATCTGTGCTCTGGTATTTGTGTCATCCGGAGGATGGCTCTGCTGTCTaGTGTGGACAAACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: TDTWIALESVLWYLCHPEDGSAV*CGQTER
Trigger: CCTTTCAGTTTGTCCACACAAGACAGCAGAGCCATC...CTCCGGATGACACAAATACCAGAGCACAGATTCAAGTGCAATCCATGTATCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GAGAGAGTCGGGCGTGTCTTCATTTTGGTAGTTCTGGAAAGGCTCCTCTTTAAAAGCCATGAATCTAGTTaGGAGAACCCACTGCAGTTC +
Preference number: 5 (lower is better)
Translates to: ERVGRVFILVVLERLLFKSHESS*ENPLQF
Trigger: GAACTGCAGTGGGTTCTCCAAACTAGATTCATGGCT...TTTAAAGAGGAGCCTTTCCAGAACTACCAAAATGAAGACACGCCCGACTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS TCA 90 bp CAGAGCTGGGTTGGCAGTGACAGAAATGCTTATGCAAACACAGGCTaGCTTCTCACTGAATGTATAGAACATCTGCACAGTCCAGTCATT +
Preference number: 5 (lower is better)
Translates to: QSWVGSDRNAYANTG*LLTECIEHLHSPVI
Trigger: AATGACTGGACTGTGCAGATGTTCTATACATTCAGTGAGAAGTCAGCCTGTGTTTGCATAAGCATTTCTGTCACTGCCAACCCAGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS-3UTR CAA 90 bp TTCTATAGCTTTGCTACCAATGACTTTTCCTTGAACGATGTATTGAATGAGGCAAGGGCAGTGTGGGGATaGGCATTCACCACTCATCCG +
Preference number: 5 (lower is better)
Translates to: FYSFATNDFSLNDVLNEARAVWG*AFTTHP
Trigger: CGGATGAGTGGTGAATGCCAATCCCCACACTGCCCT...TGCCTCATTCAATACATCGTTCAAGGAAAAGTCATTGGTAGCAAAGCTATAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGAATCACGTGGCGGGAGTaGCACTGGAAAACCAGGACG +
Preference number: 5 (lower is better)
Translates to: NSQASYNKSVNHILIITGITWRE*HWKTRT
Trigger: CGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGAT...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp GCTCCTGACGTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTGCGATACAAACTGCCGATCATaGAGTCTTGTCACACAGTAT +
Preference number: 5 (lower is better)
Translates to: APDVCARNASDVPTICCDTNCRS*SLVTQY
Trigger: ATACTGTGTGACAAGACTCAATGATCGGCAGTTTGT...ATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp GTCACACAGTATAAGTGGAAACAGTCTAAGCAAATCACGTGGCGGGAGTTGCACACAAACTGCCGATCATaGAGTCTTGTCACACAGTAT +
Preference number: 5 (lower is better)
Translates to: VTQYKWKQSKQITWRELHTNCRS*SLVTQY
Trigger: ATACTGTGTGACAAGACTCAATGATCGGCAGTTTGT...GTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACTTATACTGTGTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338468.8
ENST00000366894.6
CDS-3UTR CAA 90 bp GAAATGGGTTATCTTAGGCAGTTAGGAAAAGAGGGACAGGTGTCCCAGGATGTGACAAACTGCCGATCATaGAGTCTTGTCACACAGTAT +
Preference number: 5 (lower is better)
Translates to: EMGYLRQLGKEGQVSQDVTNCRS*SLVTQY
Trigger: ATACTGTGTGACAAGACTCAATGATCGGCAGTTTGT...CACATCCTGGGACACCTGTCCCTCTTTTCCTAACTGCCTAAGATAACCCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTG +
Preference number: 5 (lower is better)
Translates to: VLCGQTERDSGASSVILLQGVAK*RVVNKL
Trigger: CAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTG...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCTACTGCTGGTACCGGTaGTACTGCTCTTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: VLCGQTERDSGASSVILLYCWYR*YCSSPR
Trigger: TCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATTACTGCTGGTACCGGTaGTACTGCTCTTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDYCWYR*YCSSPR
Trigger: TCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GCTCCTGACGTCTGTGCACGTAATGCAAGTGATGTTCCGACTATTTGTTGCGATAAAAGCTGTTGTAGATaGATCTACCTGCTGCACAGT +
Preference number: 5 (lower is better)
Translates to: APDVCARNASDVPTICCDKSCCR*IYLLHS
Trigger: ACTGTGCAGCAGGTAGATCAATCTACAACAGCTTTT...ATCGCAACAAATAGTCGGAACATCACTTGCATTACGTGCACAGACGTCAGGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS-3UTR CAA 90 bp GATTGGACAGAGAGGGTGTGCCAAAGGGGTATAAACCCTTCTGATGGAGAGAGTATACATGGATTGCACTaGAATCTGTGCTCTGGTATT +
Preference number: 5 (lower is better)
Translates to: DWTERVCQRGINPSDGESIHGLH*NLCSGI
Trigger: AATACCAGAGCACAGATTCAAGTGCAATCCATGTAT...ACTCTCTCCATCAGAAGGGTTTATACCCCTTTGGCACACCCTCTCTGTCCAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS GCA 90 bp GAAGCCAGACTCTTTGTATTACTACAGAATGTGATTCCATGCTGTTaGCAAATGCCAGGAATTTCTACATCGACTGCCATCAGGACATGG +
Preference number: 5 (lower is better)
Translates to: EARLFVLLQNVIPCC*QMPGISTSTAIRTW
Trigger: CCATGTCCTGATGGCAGTCGATGTAGAAATTCCTGGCATTTGGCAACAGCATGGAATCACATTCTGTAGTAATACAAAGAGTCTGGCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CCA 90 bp TTCTTACAAAGATGTAGAAGGAAGATGTGGGTTTCAGAAATGTTCTaGAAACTAGAAACACTTCCCTGTGTGTCATGCTGCGACGGTGCC +
Preference number: 5 (lower is better)
Translates to: FLQRCRRKMWVSEMF*KLETLPCVSCCDGA
Trigger: GGCACCGTCGCAGCATGACACACAGGGAAGTGTTTCTAGTTTCCAGAACATTTCTGAAACCCACATCTTCCTTCTACATCTTTGTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS-3UTR CAA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAGGTCGTCGCCTCCAGTaGCATTCATTTCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: ESSLENPLQFILQRNTLSGRRLQ*HSFLDL
Trigger: AAGGTCAAGAAATGAATGCAACTGGAGGCGACGACC...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CATAAGGAATATTCTAGTGAGTTTACTGTCCTAAGAGAAGGTCTCTCCTGGGGATTCTTGATGGTTTCTTaGGAGGCTGCTTCCCAACGA +
Preference number: 5 (lower is better)
Translates to: HKEYSSEFTVLREGLSWGFLMVS*EAASQR
Trigger: TCGTTGGGAAGCAGCCTCCAAAGAAACCATCAAGAA...TCCCCAGGAGAGACCTTCTCTTAGGACAGTAAACTCACTAGAATATTCCTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TTCTATAGCTTTGCTACCAATGACTTTTCCTTGAACGATGTATTGAATGAGGCATCCCGGCTGCACTCTTaGACAGGGGCCTTTGCAATA +
Preference number: 5 (lower is better)
Translates to: FYSFATNDFSLNDVLNEASRLHS*TGAFAI
Trigger: TATTGCAAAGGCCCCTGTCAAAGAGTGCAGCCGGGA...TGCCTCATTCAATACATCGTTCAAGGAAAAGTCATTGGTAGCAAAGCTATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAGATGGCTCTGCTGTCTaGTGTGGACAAACTGAAAGG +
Preference number: 5 (lower is better)
Translates to: ESSLENPLQFILQRNTLSDGSAV*CGQTER
Trigger: CCTTTCAGTTTGTCCACACAAGACAGCAGAGCCATC...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCGGGCGTGTCTTCATTTaGGTAGTTCTGGAAAGGCTC +
Preference number: 5 (lower is better)
Translates to: VLCGQTERDSGASSVILLGRVFI*VVLERL
Trigger: GAGCCTTTCCAGAACTACCAAAATGAAGACACGCCC...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: LFPHLELCNSSIALLPMTATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...AGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCT +
Preference number: 5 (lower is better)
Translates to: FNNLQSLNPKGPPCASETATDVS*SEVGCA
Trigger: AGCACACCCCACCTCTGACAAGGAAACATCAGTAGC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCTTCTTGATGGTTTCTTaGGAGGCTGCTTCCCAACGA +
Preference number: 5 (lower is better)
Translates to: VLCGQTERDSGASSVILLFLMVS*EAASQR
Trigger: TCGTTGGGAAGCAGCCTCCAAAGAAACCATCAAGAA...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS GCA 90 bp TGTGATTCCATGCTGTTGCCAAATGCCAGGAATTTCTACATCGACTaGCATCAGGACATGGAAGTCTCATTGTTTCTTAAAACGCAACTA +
Preference number: 5 (lower is better)
Translates to: CDSMLLPNARNFYID*HQDMEVSLFLKTQL
Trigger: TAGTTGCGTTTTAAGAAACAATGAGACTTCCATGTCCTGATGGCAGTCGATGTAGAAATTCCTGGCATTTGGCAACAGCATGGAATCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS-3UTR CAA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTG +
Preference number: 5 (lower is better)
Translates to: FPHLELCNSSIALLPMTFQGVAK*RVVNKL
Trigger: CAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTG...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTTACTGCTGGTACCGGTaGTACTGCTCTTCTCCCAGA +
Preference number: 5 (lower is better)
Translates to: FPHLELCNSSIALLPMTFYCWYR*YCSSPR
Trigger: TCTGGGAGAAGAGCAGTACAACCGGTACCAGCAGTA...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp GGGCTTTTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGCTGAGGCAGCTTATTTaGTTCTTCGTTGTCCATACC +
Preference number: 5 (lower is better)
Translates to: GLFPHLELCNSSIALLPMLRQLI*FFVVHT
Trigger: GGTATGGACAACGAAGAACAAAATAAGCTGCCTCAG...CATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAAAAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp AGCAAGGATTTCAGTGCTACATCTAAAAAGAGAAGCCCTGTTGCCGATTTAATACAGGATGTGGAAAACTaGAGTTCATCCCCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: SKDFSATSKKRSPVADLIQDVEN*SSSPLF
Trigger: GAAGAGAGGGGATGAACTCAAGTTTTCCACATCCTG...TATTAAATCGGCAACAGGGCTTCTCTTTTTAGATGTAGCACTGAAATCCTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS TCA 90 bp ACTGAAACACCAGTTAGCATAGGGCATGATGCTGCTAAAGGACAATaGTATCCTTACATAATGTCATCTTTCTGTACATGCCACTCACAG +
Preference number: 5 (lower is better)
Translates to: TETPVSIGHDAAKGQ*YPYIMSSFCTCHSQ
Trigger: CTGTGAGTGGCATGTACAGAAAGATGACATTATGTAAGGATATCATTGTCCTTTAGCAGCATCATGCCCTATGCTAACTGGTGTTTCAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS GCA 90 bp CAAATAAATACTGTAGATGCCAGAGTATCACTTTGTGGAAGCCTCTaGCATGTTTGCAGTCTCAGAGCATATGGATGTAAATTGCTAGAC +
Preference number: 5 (lower is better)
Translates to: QINTVDARVSLCGSL*HVCSLRAYGCKLLD
Trigger: GTCTAGCAATTTACATCCATATGCTCTGAGACTGCAAACATGGCAGAGGCTTCCACAAAGTGATACTCTGGCATCTACAGTATTTATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CCA 90 bp TTTTTAAATCGTAAAAGCTTTAGCACAGTAGGCATTGTCCTTGCCTaGATGTTCTGTGTCGGATCTACATTCGTGTTTATACTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: FLNRKSFSTVGIVLA*MFCVGSTFVFILCC
Trigger: GCAGCACAGTATAAACACGAATGTAGATCCGACACAGAACATCCAGGCAAGGACAATGCCTACTGTGCTAAAGCTTTTACGATTTAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000647006.2
ENST00000674224.1
CDS-3UTR CAA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTGGTCGTCGCCTCCAGTaGCATTCATTTCTTGACCTT +
Preference number: 5 (lower is better)
Translates to: FPHLELCNSSIALLPMTFGRRLQ*HSFLDL
Trigger: AAGGTCAAGAAATGAATGCAACTGGAGGCGACGACC...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp GTCTTGTGTGGACAAACTGAAAGGGATTCAGGAGCTTCTTCTGTAATTTTACTCACAAACTGCCGATCATaGAGTCTTGTCACACAGTAT +
Preference number: 5 (lower is better)
Translates to: VLCGQTERDSGASSVILLTNCRS*SLVTQY
Trigger: ATACTGTGTGACAAGACTCAATGATCGGCAGTTTGT...GAGTAAAATTACAGAAGAAGCTCCTGAATCCCTTTCAGTTTGTCCACACAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp AAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCAGGATACAAACTGCCGATCATaGAGTCTTGTCACACAGTAT +
Preference number: 5 (lower is better)
Translates to: KHLVNGIFMVFTEGKRQDTNCRS*SLVTQY
Trigger: ATACTGTGTGACAAGACTCAATGATCGGCAGTTTGT...ATCCTGCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGATACATGGATTGCACTaGAATCTGTGCTCTGGTATT +
Preference number: 5 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWIHGLH*NLCSGI
Trigger: AATACCAGAGCACAGATTCAAGTGCAATCCATGTAT...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS TCA 90 bp ATTTTTAGAGCAGTTACCAGGAGAGCTGACATTGTTGAATCTACCTaGGAAGCCAGAAGCCAGACTCTTTGTATTACTACAGAATGTGAT +
Preference number: 5 (lower is better)
Translates to: IFRAVTRRADIVEST*EARSQTLCITTECD
Trigger: ATCACATTCTGTAGTAATACAAAGAGTCTGGCTTCTGGCTTCTCAGGTAGATTCAACAATGTCAGCTCTCCTGGTAACTGCTCTAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CCA 90 bp AGCCACACAGTGGATGATGAAGCTAAATATGTCTCACCGTTTGTCTaGTGTTTTATAGAGGTGGTAAAATTTCAGTTGGTGGTTCCTAAT +
Preference number: 5 (lower is better)
Translates to: SHTVDDEAKYVSPFV*CFIEVVKFQLVVPN
Trigger: ATTAGGAACCACCAACTGAAATTTTACCACCTCTATAAAACACCAGACAAACGGTGAGACATATTTAGCTTCATCATCCACTGTGTGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS-3UTR CAA 90 bp TTCTATAGCTTTGCTACCAATGACTTTTCCTTGAACGATGTATTGAATGAGGCACACCACTCATCCGGTTaGGAATTAAAACATCATCCC +
Preference number: 5 (lower is better)
Translates to: FYSFATNDFSLNDVLNEAHHSSG*ELKHHP
Trigger: GGGATGATGTTTTAATTCCAAACCGGATGAGTGGTG...TGCCTCATTCAATACATCGTTCAAGGAAAAGTCATTGGTAGCAAAGCTATAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp AATTCACAGGCATCTTACAATAAATCTGTGAACCACATCCTGATAATCACTGGATGTTCCGACTATTTGTaGCGATCAGGTGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: NSQASYNKSVNHILIITGCSDYL*RSGAKL
Trigger: TAGCTTTGCACCTGATCGCAACAAATAGTCGGAACA...TCCAGTGATTATCAGGATGTGGTTCACAGATTTATTGTAAGATGCCTGTGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGGATAAACAAATGTTTTaGACTATTGCCTGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWDKQMF*TIAWGS
Trigger: AGAACCCCAGGCAATAGTCAAAAACATTTGTTTATC...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CAGAGAAACACCTTGTCAATGGCATCTTCATGGTGTTTACTGAAGGTAAAAGGCGATAAACAAATGTTTTaGACTATTGCCTGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: QRNTLSMASSWCLLKVKGDKQMF*TIAWGS
Trigger: AGAACCCCAGGCAATAGTCAAAAACATTTGTTTATC...GCCTTTTACCTTCAGTAAACACCATGAAGATGCCATTGACAAGGTGTTTCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp CTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAATGGCTTACTATAGAGACTTaGATCTGTCCACCATTTCTA +
Preference number: 5 (lower is better)
Translates to: LVWRTHCSSFYRETPCQWLTIET*ICPPFL
Trigger: TAGAAATGGTGGACAGATCAAAGTCTCTATAGTAAG...CCATTGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTAAACCATGGCTGGAGTaGAACCTGACAAACACTATC +
Preference number: 5 (lower is better)
Translates to: FPHLELCNSSIALLPMTFKPWLE*NLTNTI
Trigger: GATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTT...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp GAATCTAGTTTGGAGAACCCACTGCAGTTCATTTTACAGAGAAACACCTTGTCAGATAAACAAATGTTTTaGACTATTGCCTGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: ESSLENPLQFILQRNTLSDKQMF*TIAWGS
Trigger: AGAACCCCAGGCAATAGTCAAAAACATTTGTTTATC...TGACAAGGTGTTTCTCTGTAAAATGAACTGCAGTGGGTTCTCCAAACTAGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS-3UTR CAA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTACAAACTGCCGATCATaGAGTCTTGTCACACAGTAT +
Preference number: 5 (lower is better)
Translates to: FPHLELCNSSIALLPMTFTNCRS*SLVTQY
Trigger: ATACTGTGTGACAAGACTCAATGATCGGCAGTTTGT...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp TTTCCACATCTGGAACTCTGTAATTCTTCTATAGCTTTGCTACCAATGACTTTTTCCTTGAACGATGTATaGAATGAGGCACTCACTTCT +
Preference number: 5 (lower is better)
Translates to: FPHLELCNSSIALLPMTFSLNDV*NEALTS
Trigger: AGAAGTGAGTGCCTCATTCAATACATCGTTCAAGGA...AAAAGTCATTGGTAGCAAAGCTATAGAAGAATTACAGAGTTCCAGATGTGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp TTCTATAGCTTTGCTACCAATGACTTTTCCTTGAACGATGTATTGAATGAGGCAACCAATGACTTTTCCTaGAACGATGTATTGAATGAG +
Preference number: 5 (lower is better)
Translates to: FYSFATNDFSLNDVLNEATNDFS*NDVLNE
Trigger: CTCATTCAATACATCGTTCAAGGAAAAGTCATTGGT...TGCCTCATTCAATACATCGTTCAAGGAAAAGTCATTGGTAGCAAAGCTATAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS-3UTR CAA 90 bp TTTAATAATTTACAGTCTCTAAATCCAAAAGGGCCTCCATGTGCTAGTGAGACTGATAAACAAATGTTTTaGACTATTGCCTGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: FNNLQSLNPKGPPCASETDKQMF*TIAWGS
Trigger: AGAACCCCAGGCAATAGTCAAAAACATTTGTTTATC...AGTCTCACTAGCACATGGAGGCCCTTTTGGATTTAGAGACTGTAAATTATTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
CDS GCA 72 bp TGGGTAGGTGGCGGCTGCGGGCCAGGAACAGGCCCATaGGCGCAGCGGCGCCAGCCGCGCCTCCCACCAGCG +
Preference number: 6 (lower is better)
Translates to: WVGGGCGPGTGP*AQRRQPRLPPA
Trigger: CGCTGGTGGGAGGCGCGGCTGGCGCCGCTGCGCGCATGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366892.5
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000674250.1
ENST00000674501.1
CDS TCA 72 bp CATACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: HTHSPGHCPLRR*LSSGQAPAAAP
Trigger: CGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS TCA 72 bp GAAACCCACAGCCCAGGCCATTGCCCCCTTCGCAGGTaGCTTTCCTCTGGTCAGGCTCCGGCAGCAGCCCCG +
Preference number: 6 (lower is better)
Translates to: ETHSPGHCPLRR*LSSGQAPAAAP
Trigger: CGGGGCTGCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612485.1
CDS GCA 72 bp GACAAACACTATCATGGTCACTGGGTAGGTGGCGGCTaGGGGCCAGGAACAGGCCCATGCGCGCAGCGGCGC +
Preference number: 6 (lower is better)
Translates to: DKHYHGHWVGGG*GPGTGPCAQRR
Trigger: GCGCCGCTGCGCGCATGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCATGATAGTGTTTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366892.5
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000674501.1
CDS GCA 72 bp CAGATTAACTATCATGGTCACTGGGTAGGTGGCGGCTaGGGGCCAGGAACAGGCCCATGCGCGCAGCGGCGC +
Preference number: 6 (lower is better)
Translates to: QINYHGHWVGGG*GPGTGPCAQRR
Trigger: GCGCCGCTGCGCGCATGGGCCTGTTCCTGGCCCGCAGCCGCCACCTACCCAGTGACCATGATAGTTAATCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674250.1
CDS CCA 72 bp TCTGGGGCTCCCGCTCACAGCCTCCCGCCGCGTTTCTaGGGTCGTCGCCTCCAGTTGCATTCATTTCTTGAC +
Preference number: 6 (lower is better)
Translates to: SGAPAHSLPPRF*GRRLQLHSFLD
Trigger: GTCAAGAAATGAATGCAACTGGAGGCGACGACCCCAGAAACGCGGCGGGAGGCTGTGAGCGGGAGCCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366897.5
ENST00000366898.6
ENST00000479615.5
ENST00000612540.1
ENST00000615065.1
ENST00000673871.1
ENST00000674232.1
ENST00000674501.1
CDS CCA 72 bp TCCCGAGCCAAGCATTGCGGAGCAGCACAAAGGGCGTaGCTGGGGAAGGGTTGGGAGAACAGGGAATCACTC +
Preference number: 6 (lower is better)
Translates to: SRAKHCGAAQRA*LGKGWENRESL
Trigger: GAGTGATTCCCTGTTCTCCCAACCCTTCCCCAGCCACGCCCTTTGTGCTGCTCCGCAATGCTTGGCTCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS GCA 72 bp GACATGCCCCAAGTGGCCACTGGGAAGTCTACACTGTaGCCCAAGGAGGGGAGTCATTCTGGGAGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: DMPQVATGKSTL*PKEGSHSGRSH
Trigger: GTGGCTTCTCCCAGAATGACTCCCCTCCTTGGGGCACAGTGTAGACTTCCCAGTGGCCACTTGGGGCATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CCA 72 bp GAGCCAAGCATTGCGGAGCAGCACAAAGGGCGTGGCTaGGGAAGGGTTGGGAGAACAGGGAATCACTCTCAC +
Preference number: 6 (lower is better)
Translates to: EPSIAEQHKGRG*GRVGRTGNHSH
Trigger: GTGAGAGTGATTCCCTGTTCTCCCAACCCTTCCCCAGCCACGCCCTTTGTGCTGCTCCGCAATGCTTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CAA 72 bp GCATCTGGGAAATACAGTTTCCTCCCGAGCCAAGCATaGCGGAGCAGCACAAAGGGCGTGGCTGGGGAAGGG +
Preference number: 6 (lower is better)
Translates to: ASGKYSFLPSQA*RSSTKGVAGEG
Trigger: CCCTTCCCCAGCCACGCCCTTTGTGCTGCTCCGCAATGCTTGGCTCGGGAGGAAACTGTATTTCCCAGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CAA 90 bp AGCCAAGCATTGCGGAGCAGCACAAAGGGCGTGGCTGGGGAAGGGTaGGGAGAACAGGGAATCACTCTCACACCCAAGAGTGCATGGAGC +
Preference number: 6 (lower is better)
Translates to: SQALRSSTKGVAGEG*GEQGITLTPKSAWS
Trigger: GCTCCATGCACTCTTGGGTGTGAGAGTGATTCCCTGTTCTCCCAACCCTTCCCCAGCCACGCCCTTTGTGCTGCTCCGCAATGCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CAA 90 bp CGCAACTGGTCAGCCGGAACCCCCTGTCGCTTAGCAACCACCTCCTaGAGCTGGAAGATGCTGGTGTCAGAATCGACCTCCACTGGGAAA +
Preference number: 6 (lower is better)
Translates to: RNWSAGTPCRLATTS*SWKMLVSESTSTGK
Trigger: TTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGTTGCTAAGCGACAGGGGGTTCCGGCTGACCAGTTGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366894.6
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000648830.1
ENST00000673871.1
ENST00000674232.1
ENST00000674259.1
ENST00000674493.1
ENST00000674501.1
CDS CAA 90 bp GCAGCTTATTTTGTTCTTCGTTGTCCATACCCACAGCCCAGGCCATaGCCCCCTTCGCAGGTGACTTTCCTCTGGTCAGGCTCCGGCAGC +
Preference number: 6 (lower is better)
Translates to: AAYFVLRCPYPQPRP*PPSQVTFLWSGSGS
Trigger: GCTGCCGGAGCCTGACCAGAGGAAAGTCACCTGCGAAGGGGGCAATGGCCTGGGCTGTGGGTATGGACAACGAAGAACAAAATAAGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS GCA 72 bp ATCCCAGCAAGATGGACCCTGGGTCAAGGTGAGCGTTaGCTGCCTGCAGGTGCTGCACTGTACCCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: IPARWTLGQGER*LPAGAALYPEF
Trigger: AAACTCAGGGTACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACCCAGGGTCCATCTTGCTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366892.5
ENST00000366894.6
ENST00000366898.6
ENST00000479615.5
ENST00000673871.1
ENST00000674232.1
ENST00000674436.1
ENST00000674501.1
CDS GCA 72 bp CATCTGGGAAATACAGTTTCCTCCCGAGCCAAGCATTaGGGAGCAGCACAAAGGGCGTGGCTGGGGAAGGGT +
Preference number: 6 (lower is better)
Translates to: HLGNTVSSRAKH*GAAQRAWLGKG
Trigger: ACCCTTCCCCAGCCACGCCCTTTGTGCTGCTCCGCAATGCTTGGCTCGGGAGGAAACTGTATTTCCCAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS GCA 72 bp ACTAGAAACACTTCCCTGTGTGTCATGCTGCGACGGTaGCATGTCACGCAGCCCACTGGAGTGGCGTGTGAG +
Preference number: 6 (lower is better)
Translates to: TRNTSLCVMLRR*HVTQPTGVACE
Trigger: CTCACACGCCACTCCAGTGGGCTGCGTGACATGGCACCGTCGCAGCATGACACACAGGGAAGTGTTTCTAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 72 bp GGAACCCCCTGTCGCTTAGCAACCACCTCCTTGAGCTaGAAGATGCTGGTGTCAGAATCGACCTCCACTGGG +
Preference number: 6 (lower is better)
Translates to: GTPCRLATTSLS*KMLVSESTSTG
Trigger: CCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTCAAGGAGGTGGTTGCTAAGCGACAGGGGGTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366894.6
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000648830.1
ENST00000673871.1
ENST00000674232.1
ENST00000674259.1
ENST00000674493.1
ENST00000674501.1
CDS CCA 72 bp TTCCTCAGCTCCTTCCCTGCGAAAATCACACGCAACTaGTCAGCCGGAACCCCCTGTCGCTTAGCAACCACC +
Preference number: 6 (lower is better)
Translates to: FLSSFPAKITRN*SAGTPCRLATT
Trigger: GGTGGTTGCTAAGCGACAGGGGGTTCCGGCTGACCAGTTGCGTGTGATTTTCGCAGGGAAGGAGCTGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366894.6
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000648830.1
ENST00000673871.1
ENST00000674232.1
ENST00000674259.1
ENST00000674493.1
ENST00000674501.1
CDS CCA 72 bp ACCAAGGCACTGCCTCCCAGTCACGGAGGAGTGGCATaGAGAAGGGATCACAGACACTTCCAGAAGCAGGAG +
Preference number: 6 (lower is better)
Translates to: TKALPPSHGGVA*RRDHRHFQKQE
Trigger: CTCCTGCTTCTGGAAGTGTCTGTGATCCCTTCTCCATGCCACTCCTCCGTGACTGGGAGGCAGTGCCTTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS TCA 72 bp GGAGAATCTCTCGAACCTGGGATGTGGACGTTGCAGTaGACCAAGATCGCACCAGTCCACTCCAGCGAGGCT +
Preference number: 6 (lower is better)
Translates to: GESLEPGMWTLQ*TKIAPVHSSEA
Trigger: AGCCTCGCTGGAGTGGACTGGTGCGATCTTGGTTCACTGCAACGTCCACATCCCAGGTTCGAGAGATTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612540.1
CDS GCA 72 bp AGGCAGGAGAATCTCTCGAACCTGGGATGTGGACGTTaGAGTGAACCAAGATCGCACCAGTCCACTCCAGCG +
Preference number: 6 (lower is better)
Translates to: RQENLSNLGCGR*SEPRSHQSTPA
Trigger: CGCTGGAGTGGACTGGTGCGATCTTGGTTCACTGCAACGTCCACATCCCAGGTTCGAGAGATTCTCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612540.1
CDS GCA 72 bp CAGGCAGCAGTGAGGCCAGATAGTGGATTCCTGTGCTaGTACCCACCACACCCAGGGCTTATATACCCTAGG +
Preference number: 6 (lower is better)
Translates to: QAAVRPDSGFLC*YPPHPGLIYPR
Trigger: CCTAGGGTATATAAGCCCTGGGTGTGGTGGGTAGCAGCACAGGAATCCACTATCTGGCCTCACTGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648830.1
CDS CAA 90 bp CGCCTCCATTACAGCGGTCCTGAGGCAGGGGTCTCTGGGCCATTATaGCTTTTGCTGTCAGTACCTGGTAAGCTCGCGTTTGAATGTCCC +
Preference number: 6 (lower is better)
Translates to: RLHYSGPEAGVSGPL*LLLSVPGKLAFECP
Trigger: GGGACATTCAAACGCGAGCTTACCAGGTACTGACAGCAAAAGCAATAATGGCCCAGAGACCCCTGCCTCAGGACCGCTGTAATGGAGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS GCA 72 bp TCTCAGGCAGCAGTGAGGCCAGATAGTGGATTCCTGTaGTGCTACCCACCACACCCAGGGCTTATATACCCT +
Preference number: 6 (lower is better)
Translates to: SQAAVRPDSGFL*CYPPHPGLIYP
Trigger: AGGGTATATAAGCCCTGGGTGTGGTGGGTAGCAGCACAGGAATCCACTATCTGGCCTCACTGCTGCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648830.1
CDS GCA 72 bp ACAGCGGTCCTGAGGCAGGGGTCTCTGGGCCATTATTaGTTTTGCTGTCAGTACCTGGTAAGCTCGCGTTTG +
Preference number: 6 (lower is better)
Translates to: TAVLRQGSLGHY*FCCQYLVSSRL
Trigger: CAAACGCGAGCTTACCAGGTACTGACAGCAAAAGCAATAATGGCCCAGAGACCCCTGCCTCAGGACCGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS GCA 72 bp TTCTGGAAACTAGAAACACTTCCCTGTGTGTCATGCTaGGACGGTGCCATGTCACGCAGCCCACTGGAGTGG +
Preference number: 6 (lower is better)
Translates to: FWKLETLPCVSC*DGAMSRSPLEW
Trigger: CCACTCCAGTGGGCTGCGTGACATGGCACCGTCGCAGCATGACACACAGGGAAGTGTTTCTAGTTTCCAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 72 bp GAGCAGATGTCACAGGAACTCGCTGGCAAGGGCATCTaGGAAATACAGTTTCCTCCCGAGCCAAGCATTGCG +
Preference number: 6 (lower is better)
Translates to: EQMSQELAGKGI*EIQFPPEPSIA
Trigger: CGCAATGCTTGGCTCGGGAGGAAACTGTATTTCCCAGATGCCCTTGCCAGCGAGTTCCTGTGACATCTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CCA 72 bp CAGGTCCTGGTGAGAAGACTATTGCTAGGAGGCATCTaGCTGGCTGGTGGCTGCTCATATCCTACGCATACC +
Preference number: 6 (lower is better)
Translates to: QVLVRRLLLGGI*LAGGCSYPTHT
Trigger: GGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCTTCTCACCAGGACCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CAA 90 bp CACATGCCTTGTCCCTGTTCCATATCTGCCCAGGGAAAAGCTATTTaGGACATGCCCCAAGTGGCCACTGGGAAGTCTACACTGTGCCCC +
Preference number: 6 (lower is better)
Translates to: HMPCPCSISAQGKAI*DMPQVATGKSTLCP
Trigger: GGGGCACAGTGTAGACTTCCCAGTGGCCACTTGGGGCATGTCCAAAATAGCTTTTCCCTGGGCAGATATGGAACAGGGACAAGGCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS GCA 72 bp AGTGGAAACAGTCTAAGCAAATCACGTGGCGGGAGTTaGACTGGAAAACCAGGACGGGGCTCCTTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: SGNSLSKSRGGS*TGKPGRGSLQE
Trigger: CTCTTGCAAGGAGCCCCGTCCTGGTTTTCCAGTGCAACTCCCGCCACGTGATTTGCTTAGACTGTTTCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674006.1
CDS GCA 72 bp AGACTATTGCTAGGAGGCATCTGGCTGGCTGGTGGCTaGTCATATCCTACGCATACCCACCTGACAGATCTC +
Preference number: 6 (lower is better)
Translates to: RLLLGGIWLAGG*SYPTHTHLTDL
Trigger: GAGATCTGTCAGGTGGGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS GCA 72 bp ATGTTCTGGAAACTAGAAACACTTCCCTGTGTGTCATaGTGCGACGGTGCCATGTCACGCAGCCCACTGGAG +
Preference number: 6 (lower is better)
Translates to: MFWKLETLPCVS*CDGAMSRSPLE
Trigger: CTCCAGTGGGCTGCGTGACATGGCACCGTCGCAGCATGACACACAGGGAAGTGTTTCTAGTTTCCAGAACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 72 bp GAGAAGACTATTGCTAGGAGGCATCTGGCTGGCTGGTaGCTGCTCATATCCTACGCATACCCACCTGACAGA +
Preference number: 6 (lower is better)
Translates to: EKTIARRHLAGW*LLISYAYPPDR
Trigger: TCTGTCAGGTGGGTATGCGTAGGATATGAGCAGCCACCAGCCAGCCAGATGCCTCCTAGCAATAGTCTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 72 bp GTGCTCGTCTTGCTTAGGGCCAACAGGCGCACTGCATaGAACTCAGCCAGCTTCAGTCACAAAGCTCACTTA +
Preference number: 6 (lower is better)
Translates to: VLVLLRANRRTA*NSASFSHKAHL
Trigger: TAAGTGAGCTTTGTGACTGAAGCTGGCTGAGTTCCATGCAGTGCGCCTGTTGGCCCTAAGCAAGACGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674353.1
CDS CAA 72 bp TACAGCGGTCCTGAGGCAGGGGTCTCTGGGCCATTATaGCTTTTGCTGTCAGTACCTGGTAAGCTCGCGTTT +
Preference number: 6 (lower is better)
Translates to: YSGPEAGVSGPL*LLLSVPGKLAF
Trigger: AAACGCGAGCTTACCAGGTACTGACAGCAAAAGCAATAATGGCCCAGAGACCCCTGCCTCAGGACCGCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CAA 90 bp TCCCGCCGCGTTTCTGGGGTCGTCGCCTCCAGTTGCATTCATTTCTaGACCTTTTCTCCACGGTCTCTGCACAATGTGAACAATGCTCTG +
Preference number: 6 (lower is better)
Translates to: SRRVSGVVASSCIHF*TFSPRSLHNVNNAL
Trigger: CAGAGCATTGTTCACATTGTGCAGAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAACTGGAGGCGACGACCCCAGAAACGCGGCGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366897.5
ENST00000366898.6
ENST00000479615.5
ENST00000612540.1
ENST00000615065.1
ENST00000673871.1
ENST00000674232.1
ENST00000674501.1
CDS CAA 90 bp TGCCATGTCACGCAGCCCACTGGAGTGGCGTGTGAGGTAATGACATaGACTTCAGGTCCTGGTGAGAAGACTATTGCTAGGAGGCATCTG +
Preference number: 6 (lower is better)
Translates to: CHVTQPTGVACEVMT*TSGPGEKTIARRHL
Trigger: CAGATGCCTCCTAGCAATAGTCTTCTCACCAGGACCTGAAGTCAATGTCATTACCTCACACGCCACTCCAGTGGGCTGCGTGACATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 72 bp GAGCTGGAAGATGCTGGTGTCAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTTGAACCTGACAAACAC +
Preference number: 6 (lower is better)
Translates to: ELEDAGVRIDLH*ETMAGVEPDKH
Trigger: GTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366894.6
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
ENST00000674232.1
ENST00000674259.1
ENST00000674493.1
ENST00000674501.1
CDS CCA 72 bp ATGCTGGTGTCAGAATCGACCTCCACTGGGAAACCATaGCTGGAGTTGAACCTGACAAACAGGACAGAAGCC +
Preference number: 6 (lower is better)
Translates to: MLVSESTSTGKP*LELNLTNRTEA
Trigger: GGCTTCTGTCCTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648830.1
CDS CCA 72 bp GAGCTGGAAGATGCTGGTGTCAGAATCGACCTCCACTaGGAAACCATGGCTGGAGTTGAACCTGACAAACAG +
Preference number: 6 (lower is better)
Translates to: ELEDAGVRIDLH*ETMAGVEPDKQ
Trigger: CTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTCCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648830.1
CDS CAA 72 bp CATCCTTACATCCTTCTTTCTGTGGCCCTCCTAGGCTaGTCACGAGTCAGCACGAATCCCAAAGGTACCAGC +
Preference number: 6 (lower is better)
Translates to: HPYILLSVALLG*SRVSTNPKGTS
Trigger: GCTGGTACCTTTGGGATTCGTGCTGACTCGTGACAAGCCTAGGAGGGCCACAGAAAGAAGGATGTAAGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CAA 72 bp GGTCCTGAGGCAGGGGTCTCTGGGCCATTATTGCTTTaGCTGTCAGTACCTGGTAAGCTCGCGTTTGAATGT +
Preference number: 6 (lower is better)
Translates to: GPEAGVSGPLLL*LSVPGKLAFEC
Trigger: ACATTCAAACGCGAGCTTACCAGGTACTGACAGCAAAAGCAATAATGGCCCAGAGACCCCTGCCTCAGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CAA 72 bp ACGCAGCCCACTGGAGTGGCGTGTGAGGTAATGACATaGACTTCAGGTCCTGGTGAGAAGACTATTGCTAGG +
Preference number: 6 (lower is better)
Translates to: TQPTGVACEVMT*TSGPGEKTIAR
Trigger: CCTAGCAATAGTCTTCTCACCAGGACCTGAAGTCAATGTCATTACCTCACACGCCACTCCAGTGGGCTGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CAA 72 bp CAGAAGGCAAACCACACAAGGCAGGGAGTAGCCAAGTaGAGGGTCGTGAACAAACTGCCGATCATTGAGTCT +
Preference number: 6 (lower is better)
Translates to: QKANHTRQGVAK*RVVNKLPIIES
Trigger: AGACTCAATGATCGGCAGTTTGTTCACGACCCTCAACTTGGCTACTCCCTGCCTTGTGTGGTTTGCCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479615.5
CDS CAA 72 bp TGTCCCTGTTCCATATCTGCCCAGGGAAAAGCTATTTaGGACATGCCCCAAGTGGCCACTGGGAAGTCTACA +
Preference number: 6 (lower is better)
Translates to: CPCSISAQGKAI*DMPQVATGKST
Trigger: TGTAGACTTCCCAGTGGCCACTTGGGGCATGTCCAAAATAGCTTTTCCCTGGGCAGATATGGAACAGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CAA 90 bp AGGTACCAGCAGCACAGAAGCTCACACTCTGTCATCAGAGCTGGGTaGGCAGTGACAGAAATGCTTATGCAAACACAGGCTGACTTCTCA +
Preference number: 6 (lower is better)
Translates to: RYQQHRSSHSVIRAG*AVTEMLMQTQADFS
Trigger: TGAGAAGTCAGCCTGTGTTTGCATAAGCATTTCTGTCACTGCCAACCCAGCTCTGATGACAGAGTGTGAGCTTCTGTGCTGCTGGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CAA 90 bp TCCTTCTTACATCCTTACATCCTTCTTTCTGTGGCCCTCCTAGGCTaGTCACGAGTCAGCACGAATCCCAAAGGTACCAGCAGCACAGAA +
Preference number: 6 (lower is better)
Translates to: SFLHPYILLSVALLG*SRVSTNPKGTSSTE
Trigger: TTCTGTGCTGCTGGTACCTTTGGGATTCGTGCTGACTCGTGACAAGCCTAGGAGGGCCACAGAAAGAAGGATGTAAGGATGTAAGAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CAA 90 bp CTAGGGGTATGTAAGTCACCAGGCGAGGCTGGGCTCTACAGCTACTaGGTAAAGTTTCTGAGCAGTACAGCATCTGTTACAGGCCCATTT +
Preference number: 6 (lower is better)
Translates to: LGVCKSPGEAGLYSY*VKFLSSTASVTGPF
Trigger: AAATGGGCCTGTAACAGATGCTGTACTGCTCAGAAACTTTACCAAGTAGCTGTAGAGCCCAGCCTCGCCTGGTGACTTACATACCCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS GCA 72 bp GACCTTTTCTCCACGGTCTCTGCACAATGTGAACAATaGTCTGCTGATCCAGGTCACAATTCTGCACAGTCC +
Preference number: 6 (lower is better)
Translates to: DLFSTVSAQCEQ*SADPGHNSAQS
Trigger: GGACTGTGCAGAATTGTGACCTGGATCAGCAGAGCATTGTTCACATTGTGCAGAGACCGTGGAGAAAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366897.5
ENST00000366898.6
ENST00000673871.1
ENST00000674232.1
ENST00000674501.1
CDS CCA 72 bp ATGCTGGTGTCAGAATCGACCTCCACTGGGAAACCATaGCTGGAGTTGAACCTGACAAACACTATCATGGTC +
Preference number: 6 (lower is better)
Translates to: MLVSESTSTGKP*LELNLTNTIMV
Trigger: GACCATGATAGTGTTTGTCAGGTTCAACTCCAGCCATGGTTTCCCAGTGGAGGTCGATTCTGACACCAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366892.5
ENST00000366896.5
ENST00000366897.5
ENST00000366898.6
ENST00000674232.1
ENST00000674493.1
ENST00000674501.1
CDS CAA 72 bp GTTTCTGGGGTCGTCGCCTCCAGTTGCATTCATTTCTaGACCTTTTCTCCACGGTCTCTGCACAATGTGAAC +
Preference number: 6 (lower is better)
Translates to: VSGVVASSCIHF*TFSPRSLHNVN
Trigger: GTTCACATTGTGCAGAGACCGTGGAGAAAAGGTCAAGAAATGAATGCAACTGGAGGCGACGACCCCAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000338468.8
ENST00000366892.5
ENST00000366897.5
ENST00000366898.6
ENST00000479615.5
ENST00000612540.1
ENST00000615065.1
ENST00000673871.1
ENST00000674232.1
ENST00000674501.1
CDS GCA 72 bp ACATTTAAAGAAAAATTCCTGGGTCAAGGTGAGCGTTaGCTGCCTGCAGGTGCTGCACTGTACCCTGAGTTT +
Preference number: 6 (lower is better)
Translates to: TFKEKFLGQGER*LPAGAALYPEF
Trigger: AAACTCAGGGTACAGTGCAGCACCTGCAGGCAGGCAACGCTCACCTTGACCCAGGAATTTTTCTTTAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366897.5
CDS CAA 72 bp TGTAAGTCACCAGGCGAGGCTGGGCTCTACAGCTACTaGGTAAAGTTTCTGAGCAGTACAGCATCTGTTACA +
Preference number: 6 (lower is better)
Translates to: CKSPGEAGLYSY*VKFLSSTASVT
Trigger: TGTAACAGATGCTGTACTGCTCAGAAACTTTACCAAGTAGCTGTAGAGCCCAGCCTCGCCTGGTGACTTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CAA 90 bp CGGAAGCTGAAGCCACATTGTGTGGTGCTCACTTCCACAGCAGACTaGTACAGCTTGAAGTATTTAAGCAGATTAACTGTCATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: RKLKPHCVVLTSTAD*YSLKYLSRLTVICS
Trigger: GCTGCAGATGACAGTTAATCTGCTTAAATACTTCAAGCTGTACAAGTCTGCTGTGGAAGTGAGCACCACACAATGTGGCTTCAGCTTCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642604.1
CDS GCA 72 bp GGACAACTGAAGTCCATCCCTAGGGAAAGGCAAGAATaGTACATCAACCTATGTAAGGGCAGGGTTTATGGT +
Preference number: 6 (lower is better)
Translates to: GQLKSIPRERQE*YINLCKGRVYG
Trigger: ACCATAAACCCTGCCCTTACATAGGTTGATGTAGCATTCTTGCCTTTCCCTAGGGATGGACTTCAGTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648830.1
CDS CCA 72 bp GGAGCTGAAGTAAACACCCCCATCCTTGTCAGTCTTTaGTTAAAGACTCTCCTAGGGGTATGTAAGTCACCA +
Preference number: 6 (lower is better)
Translates to: GAEVNTPILVSL*LKTLLGVCKSP
Trigger: TGGTGACTTACATACCCCTAGGAGAGTCTTTAACCAAAGACTGACAAGGATGGGGGTGTTTACTTCAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS TCA 72 bp ATGGAGCATATCTGGGTGTCTACACAGGTAAGAGAGTaGGGGGTCAAAACCGGGCTTCTTATGACTCTAAAA +
Preference number: 6 (lower is better)
Translates to: MEHIWVSTQVRE*GVKTGLLMTLK
Trigger: TTTTAGAGTCATAAGAAGCCCGGTTTTGACCCCTCACTCTCTTACCTGTGTAGACACCCAGATATGCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS GCA 72 bp TGTCAATATGCTCCTATCATGTCCACACCTGTCATCTaGAGCACAAGTCAGTGTGATCTATCATGGTCACTG +
Preference number: 6 (lower is better)
Translates to: CQYAPIMSTPVI*STSQCDLSWSL
Trigger: CAGTGACCATGATAGATCACACTGACTTGTGCTGCAGATGACAGGTGTGGACATGATAGGAGCATATTGACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000647006.2
ENST00000674224.1
CDS CAA 72 bp AGGGGCCTTTGCAATACACATAAAAGCTGTTGTAGATaGATCTACCTGCTGCACAGTCCAGTCATTCCTCAG +
Preference number: 6 (lower is better)
Translates to: RGLCNTHKSCCR*IYLLHSPVIPQ
Trigger: CTGAGGAATGACTGGACTGTGCAGCAGGTAGATCAATCTACAACAGCTTTTATGTGTATTGCAAAGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366894.6
CDS CAA 90 bp TTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATTCCTGG +
Preference number: 6 (lower is better)
Translates to: FRLFVAIRCKATDVS*SEVGCAPHLKKNSW
Trigger: CCAGGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366897.5
CDS CAA 90 bp TTCCGACTATTTGTTGCGATCAGGTGCAAAGCTACTGATGTTTCCTaGTCAGAGGTGGGGTGTGCTCCACATTTAAAGAAAAATTCCTGC +
Preference number: 6 (lower is better)
Translates to: FRLFVAIRCKATDVS*SEVGCAPHLKKNSC
Trigger: GCAGGAATTTTTCTTTAAATGTGGAGCACACCCCACCTCTGACAAGGAAACATCAGTAGCTTTGCACCTGATCGCAACAAATAGTCGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366896.5
CDS CAA 90 bp AAGCCACATTGTGTGGTGCTCACTTCCACAGCAGACTTGTACAGCTaGAAGTATTTAAGCAGATTAACTGTCATCTGCAGCACAAGTCAG +
Preference number: 6 (lower is better)
Translates to: KPHCVVLTSTADLYS*KYLSRLTVICSTSQ
Trigger: CTGACTTGTGCTGCAGATGACAGTTAATCTGCTTAAATACTTCAAGCTGTACAAGTCTGCTGTGGAAGTGAGCACCACACAATGTGGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642604.1
CDS TCA 72 bp TTGAACGATGTATTGAATGAGGCACTCACTTCTCCCTaGGGCAGCTTATTTTGTTCTTCGTTGTCCATACCC +
Preference number: 6 (lower is better)
Translates to: LNDVLNEALTSP*GSLFCSSLSIP
Trigger: GGGTATGGACAACGAAGAACAAAATAAGCTGCCTCAGGGAGAAGTGAGTGCCTCATTCAATACATCGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366892.5
CDS GCA 72 bp ACTGTAGATGCCAGAGTATCACTTTGTGGAAGCCTCTaGCATGTTTGCAGTCTCAGAGCATATGGATGTAAA +
Preference number: 6 (lower is better)
Translates to: TVDARVSLCGSL*HVCSLRAYGCK
Trigger: TTTACATCCATATGCTCTGAGACTGCAAACATGGCAGAGGCTTCCACAAAGTGATACTCTGGCATCTACAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CAA 72 bp TGTGTGGTGCTCACTTCCACAGCAGACTTGTACAGCTaGAAGTATTTAAGCAGATTAACTGTCATCTGCAGC +
Preference number: 6 (lower is better)
Translates to: CVVLTSTADLYS*KYLSRLTVICS
Trigger: GCTGCAGATGACAGTTAATCTGCTTAAATACTTCAAGCTGTACAAGTCTGCTGTGGAAGTGAGCACCACACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642604.1
CDS TCA 72 bp GTTGGCAGTGACAGAAATGCTTATGCAAACACAGGCTaGCTTCTCACTGAATGTATAGAACATCTGCACAGT +
Preference number: 6 (lower is better)
Translates to: VGSDRNAYANTG*LLTECIEHLHS
Trigger: ACTGTGCAGATGTTCTATACATTCAGTGAGAAGTCAGCCTGTGTTTGCATAAGCATTTCTGTCACTGCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS CCA 72 bp CGTAAAAGCTTTAGCACAGTAGGCATTGTCCTTGCCTaGATGTTCTGTGTCGGATCTACATTCGTGTTTATA +
Preference number: 6 (lower is better)
Translates to: RKSFSTVGIVLA*MFCVGSTFVFI
Trigger: TATAAACACGAATGTAGATCCGACACAGAACATCCAGGCAAGGACAATGCCTACTGTGCTAAAGCTTTTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647006.2
ENST00000674224.1
CDS CAA 72 bp AAGCCACATTGTGTGGTGCTCACTTCCACAGCAGACTaGTACAGCTTGAAGTATTTAAGCAGATTAACTGTC +
Preference number: 6 (lower is better)
Translates to: KPHCVVLTSTAD*YSLKYLSRLTV
Trigger: GACAGTTAATCTGCTTAAATACTTCAAGCTGTACAAGTCTGCTGTGGAAGTGAGCACCACACAATGTGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642604.1
CDS CAA 90 bp GCCAGGAATTTCTACATCGACTGCCATCAGGACATGGAAGTCTCATaGTTTCTTAAAACGCAACTATTCTTGAAGACATGGAAGGTCATC +
Preference number: 6 (lower is better)
Translates to: ARNFYIDCHQDMEVS*FLKTQLFLKTWKVI
Trigger: GATGACCTTCCATGTCTTCAAGAATAGTTGCGTTTTAAGAAACAATGAGACTTCCATGTCCTGATGGCAGTCGATGTAGAAATTCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS GCA 72 bp ATGCTGTTGCCAAATGCCAGGAATTTCTACATCGACTaGCATCAGGACATGGAAGTCTCATTGTTTCTTAAA +
Preference number: 6 (lower is better)
Translates to: MLLPNARNFYID*HQDMEVSLFLK
Trigger: TTTAAGAAACAATGAGACTTCCATGTCCTGATGGCAGTCGATGTAGAAATTCCTGGCATTTGGCAACAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS GCA 72 bp CTCTTTGTATTACTACAGAATGTGATTCCATGCTGTTaGCAAATGCCAGGAATTTCTACATCGACTGCCATC +
Preference number: 6 (lower is better)
Translates to: LFVLLQNVIPCC*QMPGISTSTAI
Trigger: GATGGCAGTCGATGTAGAAATTCCTGGCATTTGGCAACAGCATGGAATCACATTCTGTAGTAATACAAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS GCA 72 bp TACTTTTCAATGCATTTTTCTAGAGAGTCTAGCAGCTaGTTGACCCACCCAAATGCTCAACTTAATGTCTGC +
Preference number: 6 (lower is better)
Translates to: YFSMHFSRESSS*LTHPNAQLNVC
Trigger: GCAGACATTAAGTTGAGCATTTGGGTGGGTCAAGCAGCTGCTAGACTCTCTAGAAAAATGCATTGAAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CAA 72 bp AAGCCACATTGTGTGGTGCTCACTTCCACAGCAGACTaGTACAGCTTGAAGTATTTAAGCAGATTAACTTGT +
Preference number: 6 (lower is better)
Translates to: KPHCVVLTSTAD*YSLKYLSRLTC
Trigger: ACAAGTTAATCTGCTTAAATACTTCAAGCTGTACAAGTCTGCTGTGGAAGTGAGCACCACACAATGTGGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647006.2
CDS CAA 72 bp TGTGTGGTGCTCACTTCCACAGCAGACTTGTACAGCTaGAAGTATTTAAGCAGATTAACTATCATGGTCACT +
Preference number: 6 (lower is better)
Translates to: CVVLTSTADLYS*KYLSRLTIMVT
Trigger: AGTGACCATGATAGTTAATCTGCTTAAATACTTCAAGCTGTACAAGTCTGCTGTGGAAGTGAGCACCACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674250.1
CDS TCA 72 bp CTGTCAGTACCTGGTAAGCTCGCGTTTGAATGTCCCTaGGCTAAAATAAAATTAACAGAAAGAGCATTTGCT +
Preference number: 6 (lower is better)
Translates to: LSVPGKLAFECP*AKIKLTERAFA
Trigger: AGCAAATGCTCTTTCTGTTAATTTTATTTTAGCTCAGGGACATTCAAACGCGAGCTTACCAGGTACTGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS TCA 72 bp TTTCAATGCATTTTTCTAGAGAGTCTAGCAGCTGCTTaGCCCACCCAAATGCTCAACTTAATGTCTGCTAAT +
Preference number: 6 (lower is better)
Translates to: FQCIFLESLAAA*PTQMLNLMSAN
Trigger: ATTAGCAGACATTAAGTTGAGCATTTGGGTGGGTCAAGCAGCTGCTAGACTCTCTAGAAAAATGCATTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674501.1
CDS CAA 72 bp TTCTACATCGACTGCCATCAGGACATGGAAGTCTCATaGTTTCTTAAAACGCAACTATTCTTGAAGACATGG +
Preference number: 6 (lower is better)
Translates to: FYIDCHQDMEVS*FLKTQLFLKTW
Trigger: CCATGTCTTCAAGAATAGTTGCGTTTTAAGAAACAATGAGACTTCCATGTCCTGATGGCAGTCGATGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674259.1
CDS TCA 72 bp AAGCCCAACAAGGGTGTGTCATTAGGTAAATTCTTATaGAGGGTTATTTTGGCTCATTGCTACAAGAGAACT +
Preference number: 6 (lower is better)
Translates to: KPNKGVSLGKFL*RVILAHCYKRT
Trigger: AGTTCTCTTGTAGCAATGAGCCAAAATAACCCTTCATAAGAATTTACCTAATGACACACCCTTGTTGGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 72 bp GTGGATGATGAAGCTAAATATGTCTCACCGTTTGTCTaGTGTTTTATAGAGGTGGTAAAATTTCAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: VDDEAKYVSPFV*CFIEVVKFQLV
Trigger: CACCAACTGAAATTTTACCACCTCTATAAAACACCAGACAAACGGTGAGACATATTTAGCTTCATCATCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CAA 90 bp CAAGTTCTAGTCGACTTTGTCAGTATGCTTTTCATCTCTAAAGCTTaGAAGTCAAATCCCAGTAAATGTCAATATGCTCCTATCATGTCC +
Preference number: 6 (lower is better)
Translates to: QVLVDFVSMLFISKA*KSNPSKCQYAPIMS
Trigger: GGACATGATAGGAGCATATTGACATTTACTGGGATTTGACTTCAAAGCTTTAGAGATGAAAAGCATACTGACAAAGTCGACTAGAACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647006.2
ENST00000674224.1
CDS CAA 72 bp GTCGACTTTGTCAGTATGCTTTTCATCTCTAAAGCTTaGAAGTCAAATCCCAGTAAATGTCAATATGCTCCT +
Preference number: 6 (lower is better)
Translates to: VDFVSMLFISKA*KSNPSKCQYAP
Trigger: AGGAGCATATTGACATTTACTGGGATTTGACTTCAAAGCTTTAGAGATGAAAAGCATACTGACAAAGTCGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000647006.2
ENST00000674224.1
CDS GCA 72 bp GGTTTTAAACAGAAAGCGTCAAGTCTCTGGTGGATGTaGAATAACATCACACCATATTTAAGTTCTTACAAA +
Preference number: 6 (lower is better)
Translates to: GFKQKASSLWWM*NNITPYLSSYK
Trigger: TTTGTAAGAACTTAAATATGGTGTGATGTTATTGCACATCCACCAGAGACTTGACGCTTTCTGTTTAAAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1
CDS CCA 72 bp CATATGTTAGGTTTTAAACAGAAAGCGTCAAGTCTCTaGTGGATGTGCAATAACATCACACCATATTTAAGT +
Preference number: 6 (lower is better)
Translates to: HMLGFKQKASSL*WMCNNITPYLS
Trigger: ACTTAAATATGGTGTGATGTTATTGCACATCCACCAGAGACTTGACGCTTTCTGTTTAAAACCTAACATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674176.1
ENST00000674395.1