RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKD3 (Homo sapiens)

Ensembl gene IDs: ENSG00000115825

Ensembl transcript IDs: ENST00000234179.8, ENST00000379066.5, ENST00000443187.1, ENST00000443977.1, ENST00000464552.1, ENST00000469275.5, ENST00000475912.1, ENST00000477132.1, ENST00000494667.5

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGATCTGCACCTGCTGAATGCTGGAATCCAGTACTGGCATCAAGATaGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTAT +
Preference number: 1 (lower is better)
Translates to: RSAPAECWNPVLASR*CQSEHAYLAAEWSY
Trigger: ATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR TCA 90 bp ACCCTAGGTAAAGATAAATTGTGTAAAGCCGAGATCTGCACCTGCTaGATGCTGGAATCCAGTACTGGCATCAAGATGGTGTCAGTCAGA +
Preference number: 1 (lower is better)
Translates to: TLGKDKLCKAEICTC*MLESSTGIKMVSVR
Trigger: TCTGACTGACACCATCTTGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTCGGCTTTACACAATTTATCTTTACCTAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR GCA 90 bp ATGCTGGAATCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATaGATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTC +
Preference number: 1 (lower is better)
Translates to: MLESSTGIKMVSVRT*IFSSRVELCKDIQL
Trigger: GAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGATTCCAGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CCA 90 bp GCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTaGAGCTATGCAAAGACATACAACTCAGCACTTAGACCAGCAGTA +
Preference number: 1 (lower is better)
Translates to: ASRWCQSEHAYLAAE*SYAKTYNSALRPAV
Trigger: TACTGCTGGTCTAAGTGCTGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CCA 90 bp GTAAAGATAAATTGTGTAAAGCCGAGATCTGCACCTGCTGAATGCTaGAATCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCA +
Preference number: 1 (lower is better)
Translates to: VKINCVKPRSAPAEC*NPVLASRWCQSEHA
Trigger: TGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTCGGCTTTACACAATTTATCTTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR TCA 90 bp CATTTGTCCCTAATTATCTTAGAAGCTGTTGCAACACACAGAAGGTaGCAATCCTTATGCTGTATAGAACATATTCAGAGTAGCAGAGCA +
Preference number: 1 (lower is better)
Translates to: HLSLIILEAVATHRR*QSLCCIEHIQSSRA
Trigger: TGCTCTGCTACTCTGAATATGTTCTATACAGCATAAGGATTGTCACCTTCTGTGTGTTGCAACAGCTTCTAAGATAATTAGGGACAAATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR GCA 90 bp ACAGTACTGGTGTCACTTATTCGTTATCATATTTCTTCATATCTTTaGAGCACTGCAGATGACAATCTACAAAGAACAAGTTACACAGCA +
Preference number: 1 (lower is better)
Translates to: TVLVSLIRYHISSYL*STADDNLQRTSYTA
Trigger: TGCTGTGTAACTTGTTCTTTGTAGATTGTCATCTGCAGTGCTGCAAAGATATGAAGAAATATGATAACGAATAAGTGACACCAGTACTGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CCA 90 bp TTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTaGTGTCACTTATTCGTTATCATATTTCTTCATATCTTTGCAGCA +
Preference number: 1 (lower is better)
Translates to: LFSFPPVPTHYELQY*CHLFVIIFLHIFAA
Trigger: TGCTGCAAAGATATGAAGAAATATGATAACGAATAAGTGACACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR GCA 90 bp CTTCCTTTTGTAACATCATTTGTCCCTAATTATCTTAGAAGCTGTTaGAACACACAGAAGGTGACAATCCTTATGCTGTATAGAACATAT +
Preference number: 1 (lower is better)
Translates to: LPFVTSFVPNYLRSC*NTQKVTILMLYRTY
Trigger: ATATGTTCTATACAGCATAAGGATTGTCACCTTCTGTGTGTTGCAACAGCTTCTAAGATAATTAGGGACAAATGATGTTACAAAAGGAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CCA 90 bp CAAACACGACTTAAAGACAAAAAGTTATGCAGGTTATACAGTATCTaGAATAATCATTCAACTCCAGATTCTCTGACAGTGCCTTTACAA +
Preference number: 1 (lower is better)
Translates to: QTRLKDKKLCRLYSI*NNHSTPDSLTVPLQ
Trigger: TTGTAAAGGCACTGTCAGAGAATCTGGAGTTGAATGATTATTCCAGATACTGTATAACCTGCATAACTTTTTGTCTTTAAGTCGTGTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCGAGATCTGCACCTGCTaGATGCTGGAATCCAGTACT +
Preference number: 2 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLEICTC*MLESST
Trigger: AGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTC...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR TCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGGCAACACACAGAAGGTaGCAATCCTTATGCTGTATA +
Preference number: 2 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLATHRR*QSLCCI
Trigger: TATACAGCATAAGGATTGTCACCTTCTGTGTGTTGC...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCCTTCATTTTACAGACTaGGGAACTGCCGACAGACCT +
Preference number: 2 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLLHFTD*GTADRP
Trigger: AGGTCTGTCGGCAGTTCCTCAGTCTGTAAAATGAAG...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGTATTTAGCAGCAGAGTaGAGCTATGCAAAGACATAC +
Preference number: 2 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLYLAAE*SYAKTY
Trigger: GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATA...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR TCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATTGCAGCACTGCAGATaGCAATCTACAAAGAACAAG +
Preference number: 2 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRLQHCR*QSTKNK
Trigger: CTTGTTCTTTGTAGATTGTCATCTGCAGTGCTGCAA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGGCAACACACAGAAGGTaGCAATCCTTATGCTGTATA +
Preference number: 2 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKATHRR*QSLCCI
Trigger: TATACAGCATAAGGATTGTCACCTTCTGTGTGTTGC...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR GCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCGTGTCAGTCAGAACATaGATATTTAGCAGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLVSVRT*IFSSRV
Trigger: CACTCTGCTGCTAAATATGCATGTTCTGACTGACAC...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR TCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACTTGCAGCACTGCAGATaGCAATCTACAAAGAACAAG +
Preference number: 2 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYLQHCR*QSTKNK
Trigger: CTTGTTCTTTGTAGATTGTCATCTGCAGTGCTGCAA...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR TCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATGTACCTACTCATTATaGACTACAGTACTGGTGTCA +
Preference number: 2 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRCTYSL*TTVLVS
Trigger: TGACACCAGTACTGTAGTTCATAATGAGTAGGTACA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR GCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGATTTCTTCATATCTTTaGAGCACTGCAGATGACAAT +
Preference number: 2 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLISSYL*STADDN
Trigger: ATTGTCATCTGCAGTGCTGCAAAGATATGAAGAAAT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR GCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAGAAAAACCCTTCAATaGCTCTATGGTTTGTTAAAC +
Preference number: 2 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLRKTLQ*LYGLLN
Trigger: GTTTAACAAACCATAGAGGCATTGAAGGGTTTTTCT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAAGAAAAACCCTTCAATaGCTCTATGGTTTGTTAAAC +
Preference number: 2 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRRKTLQ*LYGLLN
Trigger: GTTTAACAAACCATAGAGGCATTGAAGGGTTTTTCT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR CCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATATGAACTACAGTACTaGTGTCACTTATTCGTTATC +
Preference number: 2 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRYELQY*CHLFVI
Trigger: GATAACGAATAAGTGACACCAGTACTGTAGTTCATA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTATGAACTACAGTACTaGTGTCACTTATTCGTTATC +
Preference number: 2 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKYELQY*CHLFVI
Trigger: GATAACGAATAAGTGACACCAGTACTGTAGTTCATA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR GCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGGTGTCAGTCAGAACATaGATATTTAGCAGCAGAGTG +
Preference number: 2 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGVSVRT*IFSSRV
Trigger: CACTCTGCTGCTAAATATGCATGTTCTGACTGACAC...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CAA 90 bp GGTAAGATTAGAGCCATACTACTGGTCTCAAATACTACTAACTGTTaGAAATTTGGCAGTAAGTTAATCTCCCCTTGCCTCAGTTTTCTT +
Preference number: 2 (lower is better)
Translates to: GKIRAILLVSNTTNC*KFGSKLISPCLSFL
Trigger: AAGAAAACTGAGGCAAGGGGAGATTAACTTACTGCCAAATTTCAAACAGTTAGTAGTATTTGAGACCAGTAGTATGGCTCTAATCTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR GCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAATTTCTTCATATCTTTaGAGCACTGCAGATGACAAT +
Preference number: 2 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSISSYL*STADDN
Trigger: ATTGTCATCTGCAGTGCTGCAAAGATATGAAGAAAT...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR GCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTATCTTAGAAGCTGTTaGAACACACAGAAGGTGACA +
Preference number: 2 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGYLRSC*NTQKVT
Trigger: TGTCACCTTCTGTGTGTTGCAACAGCTTCTAAGATA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CCA 72 bp CCTGCTGAATGCTGGAATCCAGTACTGGCATCAAGATaGTGTCAGTCAGAACATGCATATTTAGCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: PAECWNPVLASR*CQSEHAYLAAE
Trigger: CTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGATTCCAGCATTCAGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CCA 72 bp CGAGATCTGCACCTGCTGAATGCTGGAATCCAGTACTaGCATCAAGATGGTGTCAGTCAGAACATGCATATT +
Preference number: 3 (lower is better)
Translates to: RDLHLLNAGIQY*HQDGVSQNMHI
Trigger: AATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTCG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CCA 72 bp AATTGTGTAAAGCCGAGATCTGCACCTGCTGAATGCTaGAATCCAGTACTGGCATCAAGATGGTGTCAGTCA +
Preference number: 3 (lower is better)
Translates to: NCVKPRSAPAEC*NPVLASRWCQS
Trigger: TGACTGACACCATCTTGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTCGGCTTTACACAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR GCA 72 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATaGATATTTAGCAGCAGAGTGGAGCTATGCAAAGAC +
Preference number: 3 (lower is better)
Translates to: SSTGIKMVSVRT*IFSSRVELCKD
Trigger: GTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR GCA 72 bp ATAAATTGTGTAAAGCCGAGATCTGCACCTGCTGAATaGTGGAATCCAGTACTGGCATCAAGATGGTGTCAG +
Preference number: 3 (lower is better)
Translates to: INCVKPRSAPAE*WNPVLASRWCQ
Trigger: CTGACACCATCTTGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTCGGCTTTACACAATTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR TCA 72 bp AAAGATAAATTGTGTAAAGCCGAGATCTGCACCTGCTaGATGCTGGAATCCAGTACTGGCATCAAGATGGTG +
Preference number: 3 (lower is better)
Translates to: KDKLCKAEICTC*MLESSTGIKMV
Trigger: CACCATCTTGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTCGGCTTTACACAATTTATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR-3UTR CAA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGCTAGGTAAAGATAAATaGTGTAAAGCCGAGATCTGC +
Preference number: 3 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGLGKDK*CKAEIC
Trigger: GCAGATCTCGGCTTTACACAATTTATCTTTACCTAG...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR TCA 72 bp CTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATaGACTACAGTACTGGTGTCACTTATTCGTTATCAT +
Preference number: 3 (lower is better)
Translates to: LIIQFPACTYSL*TTVLVSLIRYH
Trigger: ATGATAACGAATAAGTGACACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR CCA 72 bp TTCCCGCCTGTACCTACTCATTATGAACTACAGTACTaGTGTCACTTATTCGTTATCATATTTCTTCATATC +
Preference number: 3 (lower is better)
Translates to: FPPVPTHYELQY*CHLFVIIFLHI
Trigger: GATATGAAGAAATATGATAACGAATAAGTGACACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
3UTR TCA 72 bp CTAATTATCTTAGAAGCTGTTGCAACACACAGAAGGTaGCAATCCTTATGCTGTATAGAACATATTCAGAGT +
Preference number: 3 (lower is better)
Translates to: LIILEAVATHRR*QSLCCIEHIQS
Trigger: ACTCTGAATATGTTCTATACAGCATAAGGATTGTCACCTTCTGTGTGTTGCAACAGCTTCTAAGATAATTAG
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAGGCTCGGCCCGTCGTaGGAAACTGCGCCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLRLGPS*ETAPAS
Trigger: GCTGGCGGGCGCAGTTTCTCACGACGGGCCGAGCCT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234179.8
CDS-3UTR TCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACGCGCCCGCCAGCGTCTaGGTACCGGACGAGGCGCCA +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYAPASV*VPDEAP
Trigger: TGGCGCCTCGTCCGGTACTCAGACGCTGGCGGGCGC...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234179.8
CDS-3UTR TCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGTTCCTGGTGGACATGTaGCTCTTCACTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLFLVDM*LFTGKG
Trigger: GCCCTTCCCAGTGAAGAGTCACATGTCCACCAGGAA...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACCCCGTCGTGAGAAACTaGGCCCGCCAGCGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYPVVRN*ARQRLS
Trigger: ACTCAGACGCTGGCGGGCGCAGTTTCTCACGACGGG...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234179.8
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGACACGGAGAAGCAGCTaGAAGCACAGCAGGAATAGC +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLTRRSS*KHSRNS
Trigger: GCTATTCCTGCTGTGCTTCCAGCTGCTTCTCCGTGT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGCAGGCACATTTGGGGTaGTGTGGCTGTAGACCACAA +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLQAHLG*CGCRPQ
Trigger: TTGTGGTCTACAGCCACACCACCCCAAATGTGCCTG...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379066.5
CDS-3UTR TCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGATGCCAAACTGGCCTaGACCAAGCACCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRDAKLA*TKHLIC
Trigger: GCAGATGAGGTGCTTGGTTCAGGCCAGTTTGGCATC...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGGATGCCAAACTGGCCTaGACCAAGCACCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKDAKLA*TKHLIC
Trigger: GCAGATGAGGTGCTTGGTTCAGGCCAGTTTGGCATC...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGGCACCTGCTGAATGCTaGAATCCAGTACTGGCATCA +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLAPAEC*NPVLAS
Trigger: TGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGC...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTCTGGAGTTGGTGAGTaGTGGTGCACTGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSGVGE*WCTEAS
Trigger: GGAAGCTTCAGTGCACCATCACTCACCAACTCCAGA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTCTGGAGTTGGTGAGTaGTGGTGCACTGAAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKSGVGE*WCTEAS
Trigger: GGAAGCTTCAGTGCACCATCACTCACCAACTCCAGA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACTTCCTGGTGGACATGTaGCTCTTCACTGGGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYFLVDM*LFTGKG
Trigger: GCCCTTCCCAGTGAAGAGTCACATGTCCACCAGGAA...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACCGCTTGCAGTACTaGCATATCGTGGGACGGGTG +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYNRLQY*HIVGRV
Trigger: CACCCGTCCCACGATATGTCAGTACTGCAAGCGGTT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAGGAAATGGCTCTGCTaGTGCAAGCAGCACATTTTC +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLRKWLC*CKQHIF
Trigger: GAAAATGTGCTGCTTGCATCAGCAGAGCCATTTCCT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCGAGGGCTTGGCGAATTaGTTTTTCCCAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLEGLAN*FFPALC
Trigger: GCACAGAGCTGGGAAAAAGCAATTCGCCAAGCCCTC...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGGCTGGAATCCAGTACTaGCATCAAGATGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLAGIQY*HQDGVS
Trigger: ACTGACACCATCTTGATGCCAGTACTGGATTCCAGC...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTCACATTTCAGTCCTTaGCGTACCAATCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSHFSP*RTNPQS
Trigger: GCTCTGGGGATTGGTACGTCAAGGACTGAAATGTGA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTCACACAGCTTCACCTaGGGAAATGGCTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKSHSFT*GNGSAD
Trigger: ATCAGCAGAGCCATTTCCTCAGGTGAAGCTGTGTGA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATCACACAGCTTCACCTaGGGAAATGGCTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRSHSFT*GNGSAD
Trigger: ATCAGCAGAGCCATTTCCTCAGGTGAAGCTGTGTGA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAAACGGTTGTAACCTTTaGTCCGGAGAACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRNGCNL*SGELQG
Trigger: CCCCTGAAGTTCTCCGGAGCAAAGGTTACAACCGTT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGAACGGTTGTAACCTTTaGTCCGGAGAACTTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKNGCNL*SGELQG
Trigger: CCCCTGAAGTTCTCCGGAGCAAAGGTTACAACCGTT...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGGTATGTGGACGAATCTaGAAGTCTTCTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLVCGRI*KSSTVA
Trigger: AGCCACAGTAGAAGACTTCCAGATTCGTCCACATAC...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCCTTTTCCATCCAGATTaGGCGACCACTCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLLFHPD*ATTPRR
Trigger: CCTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAG...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAGTACTGACATATCGTaGGACGGGTGTAAGAGTGAA +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLSTDIS*DGCKSE
Trigger: TTCACTCTTACACCCGTCCCACGATATGTCAGTACT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTCAGGTTATCCCTGCTaGTGTAATGGACCATCCACC +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSGYPC*CNGPST
Trigger: GGTGGATGGTCCATTACACCAGCAGGGATAACCTGA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGGTTTTATCAAGGAGTTaGATGCCCCAAAGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLVLSRS*MPQRSY
Trigger: ATAGGACCTTTGGGGCATTCAACTCCTTGATAAAAC...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAGCACACAAGATCCTTaGCAGCAGATAAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLSTQDP*QQIKTV
Trigger: AACTGTCTTTATCTGCTGTCAAGGATCTTGTGTGCT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTAACCGCTTGCAGTACTaGCATATCGTGGGACGGGTG +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGNRLQY*HIVGRV
Trigger: CACCCGTCCCACGATATGTCAGTACTGCAAGCGGTT...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGTGGATTGCTGCCTTGTaGAATGTTTGTGAAATCTCG +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLWIAAL*NVCEIS
Trigger: CGAGATTTCACAAACATTTCACAAGGCAGCAATCCA...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAAACTGTAGCATTAACTaGCCCTGCACTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSNCSIN*PCTGPA
Trigger: AGCAGGGCCAGTGCAGGGTCAGTTAATGCTACAGTT...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGCTTCATTTTACAGACTaGGGAACTGCCGACAGACCT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKLHFTD*GTADRP
Trigger: AGGTCTGTCGGCAGTTCCTCAGTCTGTAAAATGAAG...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGCCTTCACCATTGTGCTaGTCTTCCTCTTTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKPSPLC*SSSLCA
Trigger: AGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGG...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAATCTTTCCCTTGCCCTaGAGAAGTGCAAACACTTGC +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRIFPLP*RSANTC
Trigger: GCAAGTGTTTGCACTTCTCCAGGGCAAGGGAAAGAT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGATCTTTCCCTTGCCCTaGAGAAGTGCAAACACTTGC +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKIFPLP*RSANTC
Trigger: GCAAGTGTTTGCACTTCTCCAGGGCAAGGGAAAGAT...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACGCACCTGCTGAATGCTaGAATCCAGTACTGGCATCA +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYAPAEC*NPVLAS
Trigger: TGATGCCAGTACTGGATTCCAGCATTCAGCAGGTGC...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGGAGGGGAATGTTTCCTaGAGGTATTTATGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLEGNVS*RYLWVD
Trigger: ATCTACCCATAAATACCTCCAGGAAACATTCCCCTC...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAGTGCAAACACTTGCTTaGGGAGTAACAGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSVQTLA*GVTGMR
Trigger: CCTCATGCCTGTTACTCCTCAAGCAAGTGTTTGCAC...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGGTAGACAAATCTTTGTaGTCTTTCCCTTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKVDKSL*SFPCPG
Trigger: TCCAGGGCAAGGGAAAGATCACAAAGATTTGTCTAC...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCCACAGATCTCCTGAATaGCTTTTCACCAATGATGCG +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLHRSPE*LFTNDA
Trigger: CGCATCATTGGTGAAAAGTCATTCAGGAGATCTGTG...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAGAGATCTGCACCTGCTaGATGCTGGAATCCAGTACT +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSEICTC*MLESST
Trigger: AGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTC...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGACTTTCAGTAACCGCTTaGAGTACTGACATATCGTGG +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRLSVTA*STDISW
Trigger: CCACGATATGTCAGTACTGCAAGCGGTTACTGAAAG...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACCCTTCACCATTGTGCTaGTCTTCCTCTTTGTGTGCT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYPSPLC*SSSLCA
Trigger: AGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGG...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACTTCTCAGGTTATCCCTaGTGGTGTAATGGACCATCC +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYFSGYP*WCNGPS
Trigger: GGATGGTCCATTACACCAGCAGGGATAACCTGAGAA...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATTTTTCCCAGCTCTGTaGTACATCAAGTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRFFPAL*YIKSNS
Trigger: GGAGTTGGACTTGATGTAGCACAGAGCTGGGAAAAA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGAGGGCTTGGCGAATTaGTTTTTCCCAGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGEGLAN*FFPALC
Trigger: GCACAGAGCTGGGAAAAAGCAATTCGCCAAGCCCTC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTTACTTGGTTCCTGGTaGACATGTGACTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLLLGSW*TCDSSL
Trigger: CAGTGAAGAGTCACATGTCCACCAGGAACCAAGTAA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTTACTTGGTTCCTGGTaGACATGTGACTCTTCACTG +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKLLGSW*TCDSSL
Trigger: CAGTGAAGAGTCACATGTCCACCAGGAACCAAGTAA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGACTCTTACTTGGTTCCTaGTGGACATGTGACTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRLLLGS*WTCDSS
Trigger: TGAAGAGTCACATGTCCACCAGGAACCAAGTAAGAG...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCACTTTTCCATCCAGATTaGGCGACCACTCCAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSLFHPD*ATTPRR
Trigger: CCTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAG...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGCACATCGAGATCAGATaGATCCAAGAAGAACATCTT +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLHIEIR*IQEEHL
Trigger: AAGATGTTCTTCTTGGATCCATCTGATCTCGATGTG...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCCAAGTCCAACTCCAGTaGCAGCAAGAACAGGATTAT +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLQVQLQ*QQEQDY
Trigger: ATAATCCTGTTCTTGCTGCCACTGGAGTTGGACTTG...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGCAAGTCCAACTCCAGTaGCAGCAAGAACAGGATTAT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKQVQLQ*QQEQDY
Trigger: ATAATCCTGTTCTTGCTGCCACTGGAGTTGGACTTG...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAACAGGCATGAGGGCTTaGCGAATTGCTTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSTGMRA*RIAFSQ
Trigger: CTGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTGT...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGAGCACACAAGATCCTTaGCAGCAGATAAAGACAGTT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKSTQDP*QQIKTV
Trigger: AACTGTCTTTATCTGCTGTCAAGGATCTTGTGTGCT...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAGCGTTTATGGCAGTTaGATTTGCAATCTTTACACT +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLSVYGS*ICNLYT
Trigger: AGTGTAAAGATTGCAAATTCAACTGCCATAAACGCT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTGTGAAATCTCGTGGTaGAGATATGCGGAGAATTTC +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKCEISW*RYAENF
Trigger: GAAATTCTCCGCATATCTTCACCACGAGATTTCACA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTGTGAAATCTCGTGGTaGAGATATGCGGAGAATTTC +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLCEISW*RYAENF
Trigger: GAAATTCTCCGCATATCTTCACCACGAGATTTCACA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGTGCAAACACTTGCTTaGGGAGTAACAGGCATGAGG +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGVQTLA*GVTGMR
Trigger: CCTCATGCCTGTTACTCCTCAAGCAAGTGTTTGCAC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGAGATCTGCACCTGCTaGATGCTGGAATCCAGTACT +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGEICTC*MLESST
Trigger: AGTACTGGATTCCAGCATTCAGCAGGTGCAGATCTC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGAACTGTAGCATTAACTaGCCCTGCACTGGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGNCSIN*PCTGPA
Trigger: AGCAGGGCCAGTGCAGGGTCAGTTAATGCTACAGTT...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAATAAACAGACTTTGGTaGAACTGGGAAGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRINRLW*NWEVIL
Trigger: GAGGATGACTTCCCAGTTTCACCAAAGTCTGTTTAT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGAAATGAAACTGTATaGACTGAGCCTCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLRNETV*TEPLEL
Trigger: CAACTCCAGAGGCTCAGTGCATACAGTTTCATTTCT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTTGCAATCTTTACACTaGATTCCTTGGCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKLQSLH*IPWRKR
Trigger: CCTCTTTCGCCAAGGAATGCAGTGTAAAGATTGCAA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATTGCAATCTTTACACTaGATTCCTTGGCGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRLQSLH*IPWRKR
Trigger: CCTCTTTCGCCAAGGAATGCAGTGTAAAGATTGCAA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGACTCTTCCTCTTTGTGTaGTTGATGGATTGTACAACC +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRLFLFV*LMDCTT
Trigger: GGTTGTACAATCCATCAAGCACACAAAGAGGAAGAG...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATTCTCAGGTTATCCCTaGTGGTGTAATGGACCATCC +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSFSGYP*WCNGPS
Trigger: GGATGGTCCATTACACCAGCAGGGATAACCTGAGAA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGAAGTGCAAACACTTaGTTGAGGAGTAACAGGCAT +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLRSANT*LRSNRH
Trigger: ATGCCTGTTACTCCTCAAGCAAGTGTTTGCACTTCT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAACCAAGCACCTCATCTaGAAAGATCTGGTAAACAGT +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRTKHLI*KDLVNS
Trigger: ACTGTTTACCAGATCTTTGCAGATGAGGTGCTTGGT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGGTGTCAGTCAGAACATaGATATTTAGCAGCAGAGTG +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKVSVRT*IFSSRV
Trigger: CACTCTGCTGCTAAATATGCATGTTCTGACTGACAC...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTTCTGCACCTGCTGAATaGTGGAATCCAGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGSAPAE*WNPVLA
Trigger: TGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGA...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGGGAAGTCTTCTACTGTaGCTAAAGCTGAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKGSLLL*LKLKEP
Trigger: TGGTTCTTTCAGCTTTAGCCACAGTAGAAGACTTCC...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCGGAAGTCTTCTACTGTaGCTAAAGCTGAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLGSLLL*LKLKEP
Trigger: TGGTTCTTTCAGCTTTAGCCACAGTAGAAGACTTCC...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACGTATGTGGACGAATCTaGAAGTCTTCTACTGTGGCT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYVCGRI*KSSTVA
Trigger: AGCCACAGTAGAAGACTTCCAGATTCGTCCACATAC...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACCATGTGACTCTTCACTaGGAAGGGCTACATATTCAG +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYHVTLH*EGLHIQ
Trigger: CTGAATATGTAGCCCTTCCCAGTGAAGAGTCACATG...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACCTCTTACTTGGTTCCTaGTGGACATGTGACTCTTCA +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYLLLGS*WTCDSS
Trigger: TGAAGAGTCACATGTCCACCAGGAACCAAGTAAGAG...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACTTACACTGCATTCCTTaGCGAAAGAGGCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYLHCIP*RKRPFS
Trigger: ACTGAAAGGCCTCTTTCGCCAAGGAATGCAGTGTAA...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTACAGGCATGAGGGCTTaGCGAATTGCTTTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGTGMRA*RIAFSQ
Trigger: CTGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTGT...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAGCTGGAATCCAGTACTaGCATCAAGATGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSAGIQY*HQDGVS
Trigger: ACTGACACCATCTTGATGCCAGTACTGGATTCCAGC...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCCTACCTCAAATTCGGTaGGCAACGATAGTTAACACT +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLLPQIR*ATIVNT
Trigger: AGTGTTAACTATCGTTGCCCACCGAATTTGAGGTAG...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAAAGCTGATGCTTTCTaGCATATAGTTAGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYKADAF*HIVSSG
Trigger: GCCACTGCTAACTATATGTCAGAAAGCATCAGCTTT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234179.8
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTCCATCGAGAAAAGCTaGTGCTTTCTGACATATAGT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKSIEKS*CFLTYS
Trigger: ACTATATGTCAGAAAGCATCAGCTTTTCTCGATGGA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTCACATTTCAGTCCTTaGCGTACCAATCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGSHFSP*RTNPQS
Trigger: GCTCTGGGGATTGGTACGTCAAGGACTGAAATGTGA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATCCTCTTTGTGTGCTTaGTGGATTGTACAACCCTCA +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSSSLCA*WIVQPS
Trigger: TGAGGGTTGTACAATCCATCAAGCACACAAAGAGGA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGCAAGAACAGGATTATaGGAGCTGTCCCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGARTGL*ELSPLF
Trigger: GAACAATGGGGACAGCTCTCATAATCCTGTTCTTGC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAGTAGACAAATCTTTGTaGTCTTTCCCTTGCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSVDKSL*SFPCPG
Trigger: TCCAGGGCAAGGGAAAGATCACAAAGATTTGTCTAC...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTCTGGTAAACAGTACTaGTATCCACATTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKSGKQY*YPHSPE
Trigger: TTCAGGAGAATGTGGATATCAGTACTGTTTACCAGA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAATGACTTTTCACCAATaGTGCGTGCAAATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRMTFHQ*CVQIQS
Trigger: ACTTTGGATTTGCACGCATCATTGGTGAAAAGTCAT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTGTACCTACTCATTATaGACTACAGTACTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKCTYSL*TTVLVS
Trigger: TGACACCAGTACTGTAGTTCATAATGAGTAGGTACA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCTTCATTTTACAGACTaGGGAACTGCCGACAGACCT +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGLHFTD*GTADRP
Trigger: AGGTCTGTCGGCAGTTCCTCAGTCTGTAAAATGAAG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACATAAACAGACTTTGGTaGAACTGGGAAGTCATCCTC +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYINRLW*NWEVIL
Trigger: GAGGATGACTTCCCAGTTTCACCAAAGTCTGTTTAT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAAAACCACAGTAGATTaGTTGCCTAGTGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLKTTVD*LPSDSE
Trigger: TTCTGAGTCACTAGGCAATCAATCTACTGTGGTTTT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTGGAGGGGAATTATTTaGAGACATCTGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLWRGII*RHLPFF
Trigger: AAAGAAAGGCAGATGTCTGCAAATAATTCCCCTCCA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATGGAGGGGAATTATTTaGAGACATCTGCCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRWRGII*RHLPFF
Trigger: AAAGAAAGGCAGATGTCTGCAAATAATTCCCCTCCA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGACGTGTGAGGCCAATTTaGAGTAGAAATGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRRVRPI*SRNETV
Trigger: TACAGTTTCATTTCTACTGCAAATTGGCCTCACACG...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACCTCTTCCTCTTTGTGTaGTTGATGGATTGTACAACC +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYLFLFV*LMDCTT
Trigger: GGTTGTACAATCCATCAAGCACACAAAGAGGAAGAG...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAGAAGTGCAAACACTTaGTTGAGGAGTAACAGGCAT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYRSANT*LRSNRH
Trigger: ATGCCTGTTACTCCTCAAGCAAGTGTTTGCACTTCT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCACAATCCCAGGATGGTaGAAATTCTGTAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLTIPGW*KFCKIA
Trigger: GGCTATTTTACAGAATTTGCACCATCCTGGGATTGT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTATCTTAGAAGCTGTTaGAACACACAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLYLRSC*NTQKVT
Trigger: TGTCACCTTCTGTGTGTTGCAACAGCTTCTAAGATA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTATCTTAGAAGCTGTTaGAACACACAGAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKYLRSC*NTQKVT
Trigger: TGTCACCTTCTGTGTGTTGCAACAGCTTCTAAGATA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTCTGCACCTGCTGAATaGTGGAATCCAGTACTGGCA +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGSAPAE*WNPVLA
Trigger: TGCCAGTACTGGATTCCAGCATTCAGCAGGTGCAGA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAGGTAATACAGACTTCTaGGCTGATGGAGGGGAATTA +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSGNTDF*ADGGEL
Trigger: TAATTCCCCTCCATCAGCCCAGAAGTCTGTATTACC...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATACATAGAGAGTATGTaGACGAATCTGGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRYIESM*TNLEVF
Trigger: GAAGACTTCCAGATTCGTCCACATACTCTCTATGTA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTCCACTACAGTTATTTaGAATCTTGAAGGCACATCG +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSTTVI*NLEGTS
Trigger: CGATGTGCCTTCAAGATTCCAAATAACTGTAGTGGA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGAACAGCAAATGTGTGTaGAACTTTCACTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKNSKCV*NFHSAH
Trigger: ATGTGCAGAGTGAAAGTTCCACACACATTTGCTGTT...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTCAGGTTATCCCTGCTaGTGTAATGGACCATCCACC +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGSGYPC*CNGPST
Trigger: GGTGGATGGTCCATTACACCAGCAGGGATAACCTGA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGGCCGACTTTTCTCACTaGATAGAATCATTTCCAACA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKADFSH*IESFPT
Trigger: TGTTGGAAATGATTCTATCCAGTGAGAAAAGTCGGC...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTCTCCATGGATTTGGTaGGTACATAAATGCAGCATT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKSPWIW*VHKCSI
Trigger: AATGCTGCATTTATGTACCCACCAAATCCATGGAGA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAGAAATTTCTCTCCATaGATTTGGTGGGTACATAAA +
Preference number: 4 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLRNFSP*IWWVHK
Trigger: TTTATGTACCCACCAAATCCATGGAGAGAAATTTCT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCGCTCAGGTTTTCACATaGAAAAGTATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLAQVFT*KSMVIG
Trigger: TCCTATCACCATACTTTTCCATGTGAAAACCTGAGC...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGGCTCAGGTTTTCACATaGAAAAGTATGGTGATAGGA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKAQVFT*KSMVIG
Trigger: TCCTATCACCATACTTTTCCATGTGAAAACCTGAGC...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGCATATTTCATTAGATaGATGGGTCCATCGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRAYFIR*MGPSRK
Trigger: TTTTCTCGATGGACCCATTCATCTAATGAAATATGC...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGAGTTATTTGGAATCTTaGAGGCACATCGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKSYLES*RHIVYG
Trigger: ACCATAAACGATGTGCCTTCAAGATTCCAAATAACT...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTTATTTGGAATCTTaGAGGCACATCGTTTATGGT +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSYLES*RHIVYG
Trigger: ACCATAAACGATGTGCCTTCAAGATTCCAAATAACT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGACTTGTGAAATGTTTGTaGAATCTCGTGGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRLVKCL*NLVVKI
Trigger: TATCTTCACCACGAGATTTCACAAACATTTCACAAG...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCCTTGTGAAATGTTTGTaGAATCTCGTGGTGAAGATA +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLLVKCL*NLVVKI
Trigger: TATCTTCACCACGAGATTTCACAAACATTTCACAAG...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATGGATTGCTGCCTTGTaGAATGTTTGTGAAATCTCG +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSWIAAL*NVCEIS
Trigger: CGAGATTTCACAAACATTTCACAAGGCAGCAATCCA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGGCAAGAACAGGATTATaGGAGCTGTCCCCATTGTTC +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGARTGL*ELSPLF
Trigger: GAACAATGGGGACAGCTCTCATAATCCTGTTCTTGC...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGAGGAAATGGCTCTGCTaGTGCAAGCAGCACATTTTC +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGRKWLC*CKQHIF
Trigger: GAAAATGTGCTGCTTGCATCAGCAGAGCCATTTCCT...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTTTAGGTTAGCTCAGTaGTTAAGGATCTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLFRLAQ*LRIFFH
Trigger: ATGGAAGAAGATCCTTAATCACTGAGCTAACCTAAA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAAAACCACAGTAGATTaGTTGCCTAGTGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYKTTVD*LPSDSE
Trigger: TTCTGAGTCACTAGGCAATCAATCTACTGTGGTTTT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGAATTTTGTCATACATaGCAAAGAATCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSREFCHT*QRIHTL
Trigger: CAGAGTGTGGATTCTTTGGCATGTATGACAAAATTC...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCTTTCAGTAACCGCTTaGAGTACTGACATATCGTGG +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGLSVTA*STDISW
Trigger: CCACGATATGTCAGTACTGCAAGCGGTTACTGAAAG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTTTTTTCCCAGCTCTGTaGTACATCAAGTCCAACTCC +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGFFPAL*YIKSNS
Trigger: GGAGTTGGACTTGATGTAGCACAGAGCTGGGAAAAA...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACACAATCCCAGGATGGTaGAAATTCTGTAAAATAGCC +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYTIPGW*KFCKIA
Trigger: GGCTATTTTACAGAATTTGCACCATCCTGGGATTGT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTCCAACATATCTCCATaGAGCTTTTCCATTACTACA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKSNISP*SFSITT
Trigger: TGTAGTAATGGAAAAGCTGCATGGAGATATGTTGGA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACGGAGCCATAATGAAGTaGTTTGGGTATACAAGGTTA +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYGAIMK*FGYTRL
Trigger: TAACCTTGTATACCCAAAGCACTTCATTATGGCTCC...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGAACACAGGAGTACTaGATACTGTTTGCTACTATT +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLRTQEY*ILFATI
Trigger: AATAGTAGCAAACAGTATGCAGTACTCCTGTGTTCT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCATTTCATTAGATGAATaGGTCCATCGAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLISLDE*VHREKL
Trigger: CAGCTTTTCTCGATGGACCCATTCATCTAATGAAAT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGGTAATACAGACTTCTaGGCTGATGGAGGGGAATTA +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGGNTDF*ADGGEL
Trigger: TAATTCCCCTCCATCAGCCCAGAAGTCTGTATTACC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTCTGAGTTCATGTCATaGCGAAAGAGAAGAATTTTG +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSEFMS*RKRRIL
Trigger: CAAAATTCTTCTCTTTCGCCATGACATGAACTCAGA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCATGTGACTCTTCACTaGGAAGGGCTACATATTCAG +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGHVTLH*EGLHIQ
Trigger: CTGAATATGTAGCCCTTCCCAGTGAAGAGTCACATG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACAGCAAATGTGTGTaGAACTTTCACTCTGCACAT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYNSKCV*NFHSAH
Trigger: ATGTGCAGAGTGAAAGTTCCACACACATTTGCTGTT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTTTACACTGCATTCCTTaGCGAAAGAGGCCTTTCAGT +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGLHCIP*RKRPFS
Trigger: ACTGAAAGGCCTCTTTCGCCAAGGAATGCAGTGTAA...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTACAAAGACTCGTTCTaGGGTTTCAAACATACATTC +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLYKDSF*GFKHTF
Trigger: GAATGTATGTTTGAAACCCCAGAACGAGTCTTTGTA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTTTAGTAATTCGTTCTaGAAGCCGACTTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKFSNSF*KPTFLT
Trigger: AGTGAGAAAAGTCGGCTTCCAGAACGAATTACTAAA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATTTAGTAATTCGTTCTaGAAGCCGACTTTTCTCACT +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRFSNSF*KPTFLT
Trigger: AGTGAGAAAAGTCGGCTTCCAGAACGAATTACTAAA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACTCTCCATGGATTTGGTaGGTACATAAATGCAGCATT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYSPWIW*VHKCSI
Trigger: AATGCTGCATTTATGTACCCACCAAATCCATGGAGA...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATCCATCGAGAAAAGCTaGTGCTTTCTGACATATAGT +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSSIEKS*CFLTYS
Trigger: ACTATATGTCAGAAAGCATCAGCTTTTCTCGATGGA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGTTTTATCAAGGAGTTaGATGCCCCAAAGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGVLSRS*MPQRSY
Trigger: ATAGGACCTTTGGGGCATTCAACTCCTTGATAAAAC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTCCTCTTTGTGTGCTTaGTGGATTGTACAACCCTCA +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGSSLCA*WIVQPS
Trigger: TGAGGGTTGTACAATCCATCAAGCACACAAAGAGGA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTAGAAATGAAACTGTATaGACTGAGCCTCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGRNETV*TEPLEL
Trigger: CAACTCCAGAGGCTCAGTGCATACAGTTTCATTTCT...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATGGTGGGTACATAAATaGAGCATTTTGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSWWVHK*SILDLV
Trigger: GACCAAATCCAAAATGCTGCATTTATGTACCCACCA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAATTTCTTCATATCTTTaGAGCACTGCAGATGACAAT +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRISSYL*STADDN
Trigger: ATTGTCATCTGCAGTGCTGCAAAGATATGAAGAAAT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGAGAAAAACCCTTCAATaGCTCTATGGTTTGTTAAAC +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKRKTLQ*LYGLLN
Trigger: GTTTAACAAACCATAGAGGCATTGAAGGGTTTTTCT...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTACTGCATACTGTTTaGTACTATTCTTTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRVLHTV*YYSFKD
Trigger: ATCCTTGAAAGAATAGTAGCAAACAGTATGCAGTAC...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGGTACTGCATACTGTTTaGTACTATTCTTTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKVLHTV*YYSFKD
Trigger: ATCCTTGAAAGAATAGTAGCAAACAGTATGCAGTAC...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAGAACACAGGAGTACTaGATACTGTTTGCTACTATT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYRTQEY*ILFATI
Trigger: AATAGTAGCAAACAGTATGCAGTACTCCTGTGTTCT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAAAGTTAATCTCCCCTTaGCTCAGTTTTCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRKLISP*LSFLIF
Trigger: AAAGATAAGAAAACTGAGGCAAGGGGAGATTAACTT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATCCACTACAGTTATTTaGAATCTTGAAGGCACATCG +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSSTTVI*NLEGTS
Trigger: CGATGTGCCTTCAAGATTCCAAATAACTGTAGTGGA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGACTTTCTTGTTTTGTaGGGAATCTCATCTTATCAA +
Preference number: 4 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRDFLVL*GISSYQ
Trigger: TTGATAAGATGAGATTCCCCACAAAACAAGAAAGTC...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACTACAAAGACTCGTTCTaGGGTTTCAAACATACATTC +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYYKDSF*GFKHTF
Trigger: GAATGTATGTTTGAAACCCCAGAACGAGTCTTTGTA...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAGCCGACTTTTCTCACTaGATAGAATCATTTCCAACA +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSADFSH*IESFPT
Trigger: TGTTGGAAATGATTCTATCCAGTGAGAAAAGTCGGC...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGTTCTTCCATATCATCTaGATTAGGAGCCATAATGAA +
Preference number: 4 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKFFHII*IRSHNE
Trigger: TTCATTATGGCTCCTAATCCAGATGATATGGAAGAA...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTATGAACTACAGTACTaGTGTCACTTATTCGTTATC +
Preference number: 4 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLYELQY*CHLFVI
Trigger: GATAACGAATAAGTGACACCAGTACTGTAGTTCATA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATATTTAGCAGCAGAGTaGAGCTATGCAAAGACATAC +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSYLAAE*SYAKTY
Trigger: GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGGTACTGGCATCAAGATaGTGTCAGTCAGAACATGCA +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGVLASR*CQSEHA
Trigger: TGCATGTTCTGACTGACACCATCTTGATGCCAGTAC...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGAGGGGAATGTTTCCTaGAGGTATTTATGGGTAGAT +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGEGNVS*RYLWVD
Trigger: ATCTACCCATAAATACCTCCAGGAAACATTCCCCTC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTTGTACCTACTCATTATaGACTACAGTACTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGCTYSL*TTVLVS
Trigger: TGACACCAGTACTGTAGTTCATAATGAGTAGGTACA...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGGCAACACACAGAAGGTaGCAATCCTTATGCTGTATA +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGATHRR*QSLCCI
Trigger: TATACAGCATAAGGATTGTCACCTTCTGTGTGTTGC...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCGTGTGAGGCCAATTTaGAGTAGAAATGAAACTGTA +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGRVRPI*SRNETV
Trigger: TACAGTTTCATTTCTACTGCAAATTGGCCTCACACG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGACCAAGCACCTCATCTaGAAAGATCTGGTAAACAGT +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGTKHLI*KDLVNS
Trigger: ACTGTTTACCAGATCTTTGCAGATGAGGTGCTTGGT...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATCCAACATATCTCCATaGAGCTTTTCCATTACTACA +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSSNISP*SFSITT
Trigger: TGTAGTAATGGAAAAGCTGCATGGAGATATGTTGGA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTTGGTGGGTACATAAATaGAGCATTTTGGATTTGGTC +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGWWVHK*SILDLV
Trigger: GACCAAATCCAAAATGCTGCATTTATGTACCCACCA...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGGAGCCATAATGAAGTaGTTTGGGTATACAAGGTTA +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGGAIMK*FGYTRL
Trigger: TAACCTTGTATACCCAAAGCACTTCATTATGGCTCC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACATTTCTTCATATCTTTaGAGCACTGCAGATGACAAT +
Preference number: 4 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYISSYL*STADDN
Trigger: ATTGTCATCTGCAGTGCTGCAAAGATATGAAGAAAT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAATTTCATTAGATGAATaGGTCCATCGAGAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSISLDE*VHREKL
Trigger: CAGCTTTTCTCGATGGACCCATTCATCTAATGAAAT...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCACATCGAGATCAGATaGATCCAAGAAGAACATCTT +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGHIEIR*IQEEHL
Trigger: AAGATGTTCTTCTTGGATCCATCTGATCTCGATGTG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTTATTTAGCAGCAGAGTaGAGCTATGCAAAGACATAC +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGYLAAE*SYAKTY
Trigger: GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATA...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTAGCGTTTATGGCAGTTaGATTTGCAATCTTTACACT +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGSVYGS*ICNLYT
Trigger: AGTGTAAAGATTGCAAATTCAACTGCCATAAACGCT...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGATGACTTTTCACCAATaGTGCGTGCAAATCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGMTFHQ*CVQIQS
Trigger: ACTTTGGATTTGCACGCATCATTGGTGAAAAGTCAT...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCCATTTTGTGTGTGTTaGTATAAACAGACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGPFCVC*YKQTLV
Trigger: CACCAAAGTCTGTTTATATCAACACACACAAAATGG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTAAAGCTGATGCTTTCTaGCATATAGTTAGCCATAAG +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGKADAF*HIVSHK
Trigger: CTTATGGCTAACTATATGTCAGAAAGCATCAGCTTT...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379066.5
CDS-3UTR GCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAAAGTTAATCTCCCCTTaGCTCAGTTTTCTTATCTTT +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSKLISP*LSFLIF
Trigger: AAAGATAAGAAAACTGAGGCAAGGGGAGATTAACTT...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTACATAGAGAGTATGTaGACGAATCTGGAAGTCTTC +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGYIESM*TNLEVF
Trigger: GAAGACTTCCAGATTCGTCCACATACTCTCTATGTA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGGATGCACAGCGTTTATaGCAGTTGAATTTGCAATCT +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGDAQRL*QLNLQS
Trigger: AGATTGCAAATTCAACTGCCATAAACGCTGTGCATC...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCAAGAAATTTCTCTCCATaGATTTGGTGGGTACATAAA +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSRNFSP*IWWVHK
Trigger: TTTATGTACCCACCAAATCCATGGAGAGAAATTTCT...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCACATAATGAAGTGCTTTaGGTATACAAGGTTATGTGT +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSHNEVL*VYKVMC
Trigger: ACACATAACCTTGTATACCCAAAGCACTTCATTATG...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATTCTTCCATATCATCTaGATTAGGAGCCATAATGAA +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSFFHII*IRSHNE
Trigger: TTCATTATGGCTCCTAATCCAGATGATATGGAAGAA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATTAGAGCCATACTACTaGTCTCAAATACTACTAACT +
Preference number: 4 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSLEPYY*SQILLT
Trigger: AGTTAGTAGTATTTGAGACCAGTAGTATGGCTCTAA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGGCATATTTCATTAGATaGATGGGTCCATCGAGAAAA +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGAYFIR*MGPSRK
Trigger: TTTTCTCGATGGACCCATTCATCTAATGAAATATGC...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTTTAGGTTAGCTCAGTaGTTAAGGATCTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGFRLAQ*LRIFFH
Trigger: ATGGAAGAAGATCCTTAATCACTGAGCTAACCTAAA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR TCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGCCATTTTGTGTGTGTTaGTATAAACAGACTTTGGTG +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGPFCVC*YKQTLV
Trigger: CACCAAAGTCTGTTTATATCAACACACACAAAATGG...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR GCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGGAATTTTGTCATACATaGCAAAGAATCCACACTCTG +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGEFCHT*QRIHTL
Trigger: CAGAGTGTGGATTCTTTGGCATGTATGACAAAATTC...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTCTGAGTTCATGTCATaGCGAAAGAGAAGAATTTTG +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGSEFMS*RKRRIL
Trigger: CAAAATTCTTCTCTTTCGCCATGACATGAACTCAGA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTGACTTTCTTGTTTTGTaGGGAATCTCATCTTATCAA +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGDFLVL*GISSYQ
Trigger: TTGATAAGATGAGATTCCCCACAAAACAAGAAAGTC...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCATAATGAAGTGCTTTaGGTATACAAGGTTATGTGT +
Preference number: 4 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGHNEVL*VYKVMC
Trigger: ACACATAACCTTGTATACCCAAAGCACTTCATTATG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTATGAACTACAGTACTaGTGTCACTTATTCGTTATC +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGYELQY*CHLFVI
Trigger: GATAACGAATAAGTGACACCAGTACTGTAGTTCATA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CCA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGTTAGAGCCATACTACTaGTCTCAAATACTACTAACT +
Preference number: 4 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGLEPYY*SQILLT
Trigger: AGTTAGTAGTATTTGAGACCAGTAGTATGGCTCTAA...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS CCA 90 bp AATTCGGCACTGCGAGCGCCGCGGGTCTGGCTTCGGGAACTAGTTTaGGAGACCCGGGAACGGATCGCCTCCGATGGGCCGGGCGCGGTG +
Preference number: 5 (lower is better)
Translates to: NSALRAPRVWLRELV*ETRERIASDGPGAV
Trigger: CACCGCGCCCGGCCCATCGGAGGCGATCCGTTCCCGGGTCTCCCAAACTAGTTCCCGAAGCCAGACCCGCGGCGCTCGCAGTGCCGAATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477132.1
CDS GCA 90 bp ATCCACACTCTGGAAAAGTGGCAGGCTCGGCCCGTCGTGAGAAACTaGGCCCGCCAGCGTCTGAGTACCGGACGAGGCGCCAGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: IHTLEKWQARPVVRN*ARQRLSTGRGASEA
Trigger: AGCCTCGCTGGCGCCTCGTCCGGTACTCAGACGCTGGCGGGCGCAGTTTCTCACGACGGGCCGAGCCTGCCACTTTTCCAGAGTGTGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443187.1
CDS TCA 90 bp GAAGCTTCCATTAGAGAGTCGGGCAGAGAGTCCCGTCTTAGGACTTaGACACGGAGAAGCAGCTGGAAGCACAGCAGGAATAGCTGTGGG +
Preference number: 5 (lower is better)
Translates to: EASIRESGRESRLRT*TRRSSWKHSRNSCG
Trigger: CCCACAGCTATTCCTGCTGTGCTTCCAGCTGCTTCTCCGTGTTCAAGTCCTAAGACGGGACTCTCTGCCCGACTCTCTAATGGAAGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000494667.5
CDS-3UTR CAA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGACAGGCTGTAGGGGTCTaGGAACTGAGAGGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRQAVGV*ELRGRV
Trigger: GACCCGGCCTCTCAGTTCCAAGACCCCTACAGCCTG...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGCAGGCTGTAGGGGTCTaGGAACTGAGAGGCCGGGTC +
Preference number: 5 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKQAVGV*ELRGRV
Trigger: GACCCGGCCTCTCAGTTCCAAGACCCCTACAGCCTG...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS GCA 90 bp GCAAACACTTGCTTGAGGAGTAACAGGCATGAGGGCTTGGCGAATTaGTTTTTCCCAGCTCTGTGCTACATCAAGTCCAACTCCAGTGGC +
Preference number: 5 (lower is better)
Translates to: ANTCLRSNRHEGLAN*FFPALCYIKSNSSG
Trigger: GCCACTGGAGTTGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTGTTACTCCTCAAGCAAGTGTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443977.1
ENST00000469275.5
ENST00000494667.5
CDS GCA 90 bp GCCCAGGAGAGGTTCTCATTTGGGCTTGCTGTTGAAGAGTTTTCCTaGCCTAGGCAGCATGATGGACTAGCAAATCCACAACAAGGCAAA +
Preference number: 5 (lower is better)
Translates to: AQERFSFGLAVEEFS*PRQHDGLANPQQGK
Trigger: TTTGCCTTGTTGTGGATTTGCTAGTCCATCATGCTGCCTAGGGCAGGAAAACTCTTCAACAGCAAGCCCAAATGAGAACCTCTCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469275.5
CDS GCA 90 bp ACACTCTCCCGTGTGAGGCCAATTTGCAGTAGAAATGAAACTGTATaGACTGAGCCTCTGGAGTTGGTGAGTGATGGTGCACTGAAGCTT +
Preference number: 5 (lower is better)
Translates to: TLSRVRPICSRNETV*TEPLELVSDGALKL
Trigger: AAGCTTCAGTGCACCATCACTCACCAACTCCAGAGGCTCAGTGCATACAGTTTCATTTCTACTGCAAATTGGCCTCACACGGGAGAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000494667.5
CDS GCA 90 bp AGTTCCTGGGCTTCAATGGTAACACTCTCCCGTGTGAGGCCAATTTaGAGTAGAAATGAAACTGTATGCACTGAGCCTCTGGAGTTGGTG +
Preference number: 5 (lower is better)
Translates to: SSWASMVTLSRVRPI*SRNETVCTEPLELV
Trigger: CACCAACTCCAGAGGCTCAGTGCATACAGTTTCATTTCTACTGCAAATTGGCCTCACACGGGAGAGTGTTACCATTGAAGCCCAGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000464552.1
ENST00000494667.5
CDS GCA 90 bp CTTTACACTGCATTCCTTGGCGAAAGAGGCCTTTCAGTAACCGCTTaGAGTACTGACATATCGTGGGACGGGTGTAAGAGTGAACAGCAA +
Preference number: 5 (lower is better)
Translates to: LYTAFLGERGLSVTA*STDISWDGCKSEQQ
Trigger: TTGCTGTTCACTCTTACACCCGTCCCACGATATGTCAGTACTGCAAGCGGTTACTGAAAGGCCTCTTTCGCCAAGGAATGCAGTGTAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000475912.1
ENST00000494667.5
CDS-3UTR CAA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAACTGAGCCTCTGGAGTaGGTGAGTGATGGTGCACTG +
Preference number: 5 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRTEPLE*VSDGAL
Trigger: CAGTGCACCATCACTCACCAACTCCAGAGGCTCAGT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS GCA 90 bp GACGGGTGTAAGAGTGAACAGCAAATGTGTGTGGAACTTTCACTCTaGACATTACCATCTTTTCCATCCAGATTGGGCGACCACTCCAAG +
Preference number: 5 (lower is better)
Translates to: DGCKSEQQMCVELSL*TLPSFPSRLGDHSK
Trigger: CTTGGAGTGGTCGCCCAATCTGGATGGAAAAGATGGTAATGTGCAGAGTGAAAGTTCCACACACATTTGCTGTTCACTCTTACACCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443187.1
ENST00000475912.1
ENST00000494667.5
CDS CCA 90 bp GCAGCTGGAAGCACAGCAGGAATAGCTGTGGGTAATACAGACTTCTaGGCTGATGGAGGGGAATTATTTGCAGACATCTGCCTTTCTTTA +
Preference number: 5 (lower is better)
Translates to: AAGSTAGIAVGNTDF*ADGGELFADICLSL
Trigger: TAAAGAAAGGCAGATGTCTGCAAATAATTCCCCTCCATCAGCCCAGAAGTCTGTATTACCCACAGCTATTCCTGCTGTGCTTCCAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000494667.5
CDS CCA 90 bp ACTATGGAGCACACAAGATCCTTGACAGCAGATAAAGACAGTTCCTaGGCTTCAATGGTAACACTCTCCCGTGTGAGGCCAATTTGCAGT +
Preference number: 5 (lower is better)
Translates to: TMEHTRSLTADKDSS*ASMVTLSRVRPICS
Trigger: ACTGCAAATTGGCCTCACACGGGAGAGTGTTACCATTGAAGCCCAGGAACTGTCTTTATCTGCTGTCAAGGATCTTGTGTGCTCCATAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000464552.1
ENST00000494667.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACACTGAGCCTCTGGAGTaGGTGAGTGATGGTGCACTG +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYTEPLE*VSDGAL
Trigger: CAGTGCACCATCACTCACCAACTCCAGAGGCTCAGT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGTTTACACTGCATTCCTaGGCGAAAGAGGCCTTTCAG +
Preference number: 5 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLFTLHS*AKEAFQ
Trigger: CTGAAAGGCCTCTTTCGCCAAGGAATGCAGTGTAAA...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGTTTGTGATCTTTCCCTaGCCCTGGAGAAGTGCAAAC +
Preference number: 5 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLFVIFP*PWRSAN
Trigger: GTTTGCACTTCTCCAGGGCAAGGGAAAGATCACAAA...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS CCA 90 bp GTGTGGAACTTTCACTCTGCACATTACCATCTTTTCCATCCAGATTaGGCGACCACTCCAAGAAGGAATTCTCTTACTTGGTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: VWNFHSAHYHLFHPD*ATTPRRNSLTWFLV
Trigger: CACCAGGAACCAAGTAAGAGAATTCCTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAGATGGTAATGTGCAGAGTGAAAGTTCCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443187.1
ENST00000475912.1
ENST00000494667.5
CDS-3UTR CAA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAAGGAATTCTCTTACTaGGTTCCTGGTGGACATGTG +
Preference number: 5 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLKEFSY*VPGGHV
Trigger: CACATGTCCACCAGGAACCAAGTAAGAGAATTCCTT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGAGTCTCTTGGTACTTTaGATGCACAGCGTTTATGGC +
Preference number: 5 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLSLLVL*MHSVYG
Trigger: GCCATAAACGCTGTGCATCAAAAGTACCAAGAGACT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAAACAGGCATGAGGGCTaGGCGAATTGCTTTTTCCCA +
Preference number: 5 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRNRHEG*ANCFFP
Trigger: TGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTGTT...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGCATCAAAAAGCAGTCTaGTCTGTAGGAAGACAACCA +
Preference number: 5 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLHQKAV*SVGRQP
Trigger: TGGTTGTCTTCCTACAGACAAGACTGCTTTTTGATG...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACTCTTTTCCATCCAGATaGGGCGACCACTCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYSFPSR*GDHSKK
Trigger: CTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAGA...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATTTACACTGCATTCCTaGGCGAAAGAGGCCTTTCAG +
Preference number: 5 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRFTLHS*AKEAFQ
Trigger: CTGAAAGGCCTCTTTCGCCAAGGAATGCAGTGTAAA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTGCAAACACTTGCTaGAGGAGTAACAGGCATGAG +
Preference number: 5 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSANTC*RSNRHE
Trigger: CTCATGCCTGTTACTCCTCAAGCAAGTGTTTGCACT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTGACGGAGTTGACTTTCTaGTTTTGTGGGGAATCTCAT +
Preference number: 5 (lower is better)
Translates to: FSLDRRLASGMSKGLLSLTELTF*FCGESH
Trigger: ATGAGATTCCCCACAAAACAAGAAAGTCAACTCCGT...CAGACTGAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS TCA 90 bp TCCACCCTTCCTTCACCATTGTGCTGCTCTTCCTCTTTGTGTGCTTaGTGGATTGTACAACCCTCATTAGCGGAATATTATTGCTTGTTG +
Preference number: 5 (lower is better)
Translates to: STLPSPLCCSSSLCA*WIVQPSLAEYYCLL
Trigger: CAACAAGCAATAATATTCCGCTAATGAGGGTTGTACAATCCATCAAGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGGAAGGGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000469275.5
ENST00000494667.5
CDS GCA 90 bp ACCATCCACCCTTCCTTCACCATTGTGCTGCTCTTCCTCTTTGTGTaGTTGATGGATTGTACAACCCTCATTAGCGGAATATTATTGCTT +
Preference number: 5 (lower is better)
Translates to: TIHPSFTIVLLFLFV*LMDCTTLISGILLL
Trigger: AAGCAATAATATTCCGCTAATGAGGGTTGTACAATCCATCAAGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGGAAGGGTGGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000469275.5
ENST00000494667.5
CDS-3UTR CAA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGAAGGAATTCTCTTACTaGGTTCCTGGTGGACATGTG +
Preference number: 5 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKKEFSY*VPGGHV
Trigger: CACATGTCCACCAGGAACCAAGTAAGAGAATTCCTT...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATCTTTTCCATCCAGATaGGGCGACCACTCCAAGAAG +
Preference number: 5 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSSFPSR*GDHSKK
Trigger: CTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAGA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTCTCTTGGTACTTTaGATGCACAGCGTTTATGGC +
Preference number: 5 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSLLVL*MHSVYG
Trigger: GCCATAAACGCTGTGCATCAAAAGTACCAAGAGACT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCACTCCAAGGCAGTCTCTaGGTACTTTTGATGCACAGC +
Preference number: 5 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSLQGSL*VLLMHS
Trigger: GCTGTGCATCAAAAGTACCAAGAGACTGCCTTGGAG...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGATTCCTCTTTGTGTGCTaGATGGATTGTACAACCCTC +
Preference number: 5 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRFLFVC*MDCTTL
Trigger: GAGGGTTGTACAATCCATCAAGCACACAAAGAGGAA...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCAGTTTTATCAAGGAGTaGAATGCCCCAAAGGTCCTA +
Preference number: 5 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSFIKE*NAPKVL
Trigger: TAGGACCTTTGGGGCATTCAACTCCTTGATAAAACT...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACGAGCACACAAGATCCTaGACAGCAGATAAAGACAGT +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYEHTRS*TADKDS
Trigger: ACTGTCTTTATCTGCTGTCAAGGATCTTGTGTGCTC...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCTCCAAGGCAGTCTCTaGGTACTTTTGATGCACAGC +
Preference number: 5 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGLQGSL*VLLMHS
Trigger: GCTGTGCATCAAAAGTACCAAGAGACTGCCTTGGAG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACTTCCTCTTTGTGTGCTaGATGGATTGTACAACCCTC +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYFLFVC*MDCTTL
Trigger: GAGGGTTGTACAATCCATCAAGCACACAAAGAGGAA...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACCATCAAAAAGCAGTCTaGTCTGTAGGAAGACAACCA +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYHQKAV*SVGRQP
Trigger: TGGTTGTCTTCCTACAGACAAGACTGCTTTTTGATG...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAGTTTTATCAAGGAGTaGAATGCCCCAAAGGTCCTA +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYSFIKE*NAPKVL
Trigger: TAGGACCTTTGGGGCATTCAACTCCTTGATAAAACT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACATGGAGGGGAATTATTaGCAGACATCTGCCTTTCTT +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYMEGNY*QTSAFL
Trigger: AAGAAAGGCAGATGTCTGCAAATAATTCCCCTCCAT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCCAGTTATTTGGAATCTaGAAGGCACATCGTTTATGG +
Preference number: 5 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLQLFGI*KAHRLW
Trigger: CCATAAACGATGTGCCTTCAAGATTCCAAATAACTG...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp GATATTTTTAGTCTAGACAGGAGACTAGCTTCAGGGATGTCGAAAGGCCTTCTCTCAAAACAGTGTGGATaGCTGCCTTGTGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: DIFSLDRRLASGMSKGLLSKQCG*LPCEMF
Trigger: AAACATTTCACAAGGCAGCAATCCACACTGTTTTGA...GAGAAGGCCTTTCGACATCCCTGAAGCTAGTCTCCTGTCTAGACTAAAAATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTTTTGTGATCTTTCCCTaGCCCTGGAGAAGTGCAAAC +
Preference number: 5 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGFVIFP*PWRSAN
Trigger: GTTTGCACTTCTCCAGGGCAAGGGAAAGATCACAAA...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACACGGAGTTGACTTTCTaGTTTTGTGGGGAATCTCAT +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYTELTF*FCGESH
Trigger: ATGAGATTCCCCACAAAACAAGAAAGTCAACTCCGT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp AGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGCTAGGTAAAGATAAATaGTGTAAAGCCGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: RWCQSEHAYLAAEWSYAKLGKDK*CKAEIC
Trigger: GCAGATCTCGGCTTTACACAATTTATCTTTACCTAG...CTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACACCATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACACACTCTGGAAACTTTaGATAAACTATGGAGCACAC +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYTLWKL*INYGAH
Trigger: GTGTGCTCCATAGTTTATCAAAAGTTTCCAGAGTGT...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCCAGTACTGGCATCAAGATGGTGTCAGTCAGAACATGCATATTTAGCAGCAGACTGGTAAAGATACATTaGACAGACGTCTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: SSTGIKMVSVRTCIFSSRLVKIH*TDVSFL
Trigger: TAAGAAAGAGACGTCTGTCAAATGTATCTTTACCAG...TCTGCTGCTAAATATGCATGTTCTGACTGACACCATCTTGATGCCAGTACTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGAGTGCAAACACTTGCTaGAGGAGTAACAGGCATGAG +
Preference number: 5 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGSANTC*RSNRHE
Trigger: CTCATGCCTGTTACTCCTCAAGCAAGTGTTTGCACT...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TGTCAGTCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACCTAGGTAAAGATAAATaGTGTAAAGCCGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: CQSEHAYLAAEWSYAKTYLGKDK*CKAEIC
Trigger: GCAGATCTCGGCTTTACACAATTTATCTTTACCTAG...GTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGACTGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGGAGCACACAAGATCCTaGACAGCAGATAAAGACAGT +
Preference number: 5 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGEHTRS*TADKDS
Trigger: ACTGTCTTTATCTGCTGTCAAGGATCTTGTGTGCTC...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCAGAACATGCATATTTAGCAGCAGAGTGGAGCTATGCAAAGACATACAACTCATCAAAACAGTGTGGATaGCTGCCTTGTGAAATGTTT +
Preference number: 5 (lower is better)
Translates to: SEHAYLAAEWSYAKTYNSSKQCG*LPCEMF
Trigger: AAACATTTCACAAGGCAGCAATCCACACTGTTTTGA...TGAGTTGTATGTCTTTGCATAGCTCCACTCTGCTGCTAAATATGCATGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS-3UTR CAA 90 bp TCTTATTATTCAGTTTCCCGCCTGTACCTACTCATTATGAACTACAGTACTGGTCAGTTATTTGGAATCTaGAAGGCACATCGTTTATGG +
Preference number: 5 (lower is better)
Translates to: SYYSVSRLYLLIMNYSTGQLFGI*KAHRLW
Trigger: CCATAAACGATGTGCCTTCAAGATTCCAAATAACTG...ACCAGTACTGTAGTTCATAATGAGTAGGTACAGGCGGGAAACTGAATAATAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS CCA 90 bp ACCCCGACTACTATCACTATTTATGTCATTATTGTCAATATCCATTaGTATATCTGTATCTGTTCCCAGACTGGAAGGTTCTCCATTGAA +
Preference number: 5 (lower is better)
Translates to: TPTTITIYVIIVNIH*YICICSQTGRFSIE
Trigger: TTCAATGGAGAACCTTCCAGTCTGGGAACAGATACAGATATACCAATGGATATTGACAATAATGACATAAATAGTGATAGTAGTCGGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000494667.5
CDS-3UTR CAA 90 bp AAAATAATTGACTTTAAAACACTCCAGATATCTGCAAAGCCCAATAGGCTAGGGCTGGTAAAGATACATTaGACAGACGTCTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: KIIDFKTLQISAKPNRLGLVKIH*TDVSFL
Trigger: TAAGAAAGAGACGTCTGTCAAATGTATCTTTACCAG...CCCTAGCCTATTGGGCTTTGCAGATATCTGGAGTGTTTTAAAGTCAATTATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS TCA 90 bp AGTTCCATTAAACAGTTGAAGATGCTAACGCACAGTAAGGTTAAATaGCTTCATCAATATCCTAAATCGCAAAGTTGGATTTCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: SSIKQLKMLTHSKVK*LHQYPKSQSWISGS
Trigger: TGAACCTGAAATCCAACTTTGCGATTTAGGATATTGATGAAGTCATTTAACCTTACTGTGCGTTAGCATCTTCAACTGTTTAATGGAACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494667.5
CDS CCA 90 bp GTTTATCAGATCAATTGCTTCACCAGAAATTTCTCTCCATGGATTTaGTGGGTACATAAATGCAGCATTTTGGATTTGGTCATTTATATC +
Preference number: 5 (lower is better)
Translates to: VYQINCFTRNFSPWI*WVHKCSILDLVIYI
Trigger: GATATAAATGACCAAATCCAAAATGCTGCATTTATGTACCCACCAAATCCATGGAGAGAAATTTCTGGTGAAGCAATTGATCTGATAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS CCA 72 bp ACTAGTTTGGGAGACCCGGGAACGGATCGCCTCCGATaGGCCGGGCGCGGTGGTCTCCAGCGGAGCGCGAAC +
Preference number: 6 (lower is better)
Translates to: TSLGDPGTDRLR*AGRGGLQRSAN
Trigger: GTTCGCGCTCCGCTGGAGACCACCGCGCCCGGCCCATCGGAGGCGATCCGTTCCCGGGTCTCCCAAACTAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477132.1
CDS CAA 90 bp AAATTCGGCACTGCGAGCGCCGCGGGTCTGGCTTCGGGAACTAGTTaGGGAGACCCGGGAACGGATCGCCTCCGATGGGCCGGGCGCGGT +
Preference number: 6 (lower is better)
Translates to: KFGTASAAGLASGTS*GDPGTDRLRWAGRG
Trigger: ACCGCGCCCGGCCCATCGGAGGCGATCCGTTCCCGGGTCTCCCAAACTAGTTCCCGAAGCCAGACCCGCGGCGCTCGCAGTGCCGAATTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477132.1
CDS GCA 72 bp CTGGAAAAGTGGCAGGCTCGGCCCGTCGTGAGAAACTaGGCCCGCCAGCGTCTGAGTACCGGACGAGGCGCC +
Preference number: 6 (lower is better)
Translates to: LEKWQARPVVRN*ARQRLSTGRGA
Trigger: GGCGCCTCGTCCGGTACTCAGACGCTGGCGGGCGCAGTTTCTCACGACGGGCCGAGCCTGCCACTTTTCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443187.1
CDS CAA 72 bp ACTGCGAGCGCCGCGGGTCTGGCTTCGGGAACTAGTTaGGGAGACCCGGGAACGGATCGCCTCCGATGGGCC +
Preference number: 6 (lower is better)
Translates to: TASAAGLASGTS*GDPGTDRLRWA
Trigger: GGCCCATCGGAGGCGATCCGTTCCCGGGTCTCCCAAACTAGTTCCCGAAGCCAGACCCGCGGCGCTCGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477132.1
CDS CAA 72 bp CACTGGGAAGGGCTACATATTCAGGCTGTAGGGGTCTaGGAACTGAGAGGCCGGGTCCTGGTAAAGATACAT +
Preference number: 6 (lower is better)
Translates to: HWEGLHIQAVGV*ELRGRVLVKIH
Trigger: ATGTATCTTTACCAGGACCCGGCCTCTCAGTTCCAAGACCCCTACAGCCTGAATATGTAGCCCTTCCCAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443187.1
ENST00000475912.1
ENST00000494667.5
CDS CAA 72 bp TTGGAGCCCAGGAGAGGTTCTCATTTGGGCTTGCTGTaGAAGAGTTTTCCTGCCCTAGGCAGCATGATGGAC +
Preference number: 6 (lower is better)
Translates to: LEPRRGSHLGLL*KSFPALGSMMD
Trigger: GTCCATCATGCTGCCTAGGGCAGGAAAACTCTTCAACAGCAAGCCCAAATGAGAACCTCTCCTGGGCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469275.5
CDS CAA 90 bp GTGACTCTTCACTGGGAAGGGCTACATATTCAGGCTGTAGGGGTCTaGGAACTGAGAGGCCGGGTCCTGGTAAAGATACATTTGACAGAC +
Preference number: 6 (lower is better)
Translates to: VTLHWEGLHIQAVGV*ELRGRVLVKIHLTD
Trigger: GTCTGTCAAATGTATCTTTACCAGGACCCGGCCTCTCAGTTCCAAGACCCCTACAGCCTGAATATGTAGCCCTTCCCAGTGAAGAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443187.1
ENST00000475912.1
ENST00000494667.5
CDS GCA 72 bp GCATTCCTTGGCGAAAGAGGCCTTTCAGTAACCGCTTaGAGTACTGACATATCGTGGGACGGGTGTAAGAGT +
Preference number: 6 (lower is better)
Translates to: AFLGERGLSVTA*STDISWDGCKS
Trigger: ACTCTTACACCCGTCCCACGATATGTCAGTACTGCAAGCGGTTACTGAAAGGCCTCTTTCGCCAAGGAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000475912.1
ENST00000494667.5
CDS GCA 72 bp CATGAGGGCTTGGCGAATTGCTTTTTCCCAGCTCTGTaGTACATCAAGTCCAACTCCAGTGGCAGCAAGAAC +
Preference number: 6 (lower is better)
Translates to: HEGLANCFFPAL*YIKSNSSGSKN
Trigger: GTTCTTGCTGCCACTGGAGTTGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGCCAAGCCCTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443977.1
ENST00000469275.5
ENST00000494667.5
CDS GCA 72 bp TGCTTGAGGAGTAACAGGCATGAGGGCTTGGCGAATTaGTTTTTCCCAGCTCTGTGCTACATCAAGTCCAAC +
Preference number: 6 (lower is better)
Translates to: CLRSNRHEGLAN*FFPALCYIKSN
Trigger: GTTGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTGTTACTCCTCAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443977.1
ENST00000469275.5
ENST00000494667.5
CDS CAA 72 bp GCAAACACTTGCTTGAGGAGTAACAGGCATGAGGGCTaGGCGAATTGCTTTTTCCCAGCTCTGTGCTACATC +
Preference number: 6 (lower is better)
Translates to: ANTCLRSNRHEG*ANCFFPALCYI
Trigger: GATGTAGCACAGAGCTGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTGTTACTCCTCAAGCAAGTGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443977.1
ENST00000469275.5
ENST00000494667.5
CDS CAA 72 bp GAATATTTGGAGCCCAGGAGAGGTTCTCATTTGGGCTaGCTGTTGAAGAGTTTTCCTGCCCTAGGCAGCATG +
Preference number: 6 (lower is better)
Translates to: EYLEPRRGSHLG*LLKSFPALGSM
Trigger: CATGCTGCCTAGGGCAGGAAAACTCTTCAACAGCAAGCCCAAATGAGAACCTCTCCTGGGCTCCAAATATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469275.5
CDS CAA 90 bp TGGAGAAGTGCAAACACTTGCTTGAGGAGTAACAGGCATGAGGGCTaGGCGAATTGCTTTTTCCCAGCTCTGTGCTACATCAAGTCCAAC +
Preference number: 6 (lower is better)
Translates to: WRSANTCLRSNRHEG*ANCFFPALCYIKSN
Trigger: GTTGGACTTGATGTAGCACAGAGCTGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTGTTACTCCTCAAGCAAGTGTTTGCACTTCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443977.1
ENST00000469275.5
ENST00000494667.5
CDS CCA 72 bp AGCACAGCAGGAATAGCTGTGGGTAATACAGACTTCTaGGCTGATGGAGGGGAATTATTTGCAGACATCTGC +
Preference number: 6 (lower is better)
Translates to: STAGIAVGNTDF*ADGGELFADIC
Trigger: GCAGATGTCTGCAAATAATTCCCCTCCATCAGCCCAGAAGTCTGTATTACCCACAGCTATTCCTGCTGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000494667.5
CDS CAA 90 bp CCAATTTGCAGTAGAAATGAAACTGTATGCACTGAGCCTCTGGAGTaGGTGAGTGATGGTGCACTGAAGCTTCCATTAGAGAGTCGGGCA +
Preference number: 6 (lower is better)
Translates to: PICSRNETVCTEPLE*VSDGALKLPLESRA
Trigger: TGCCCGACTCTCTAATGGAAGCTTCAGTGCACCATCACTCACCAACTCCAGAGGCTCAGTGCATACAGTTTCATTTCTACTGCAAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000494667.5
CDS CAA 90 bp ATCTTTGTGATCTTTCCCTTGCCCTGGAGAAGTGCAAACACTTGCTaGAGGAGTAACAGGCATGAGGGCTTGGCGAATTGCTTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: IFVIFPLPWRSANTC*RSNRHEGLANCFFP
Trigger: TGGGAAAAAGCAATTCGCCAAGCCCTCATGCCTGTTACTCCTCAAGCAAGTGTTTGCACTTCTCCAGGGCAAGGGAAAGATCACAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443977.1
ENST00000469275.5
ENST00000494667.5
CDS GCA 72 bp GCTTCAATGGTAACACTCTCCCGTGTGAGGCCAATTTaGAGTAGAAATGAAACTGTATGCACTGAGCCTCTG +
Preference number: 6 (lower is better)
Translates to: ASMVTLSRVRPI*SRNETVCTEPL
Trigger: CAGAGGCTCAGTGCATACAGTTTCATTTCTACTGCAAATTGGCCTCACACGGGAGAGTGTTACCATTGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000464552.1
ENST00000494667.5
CDS GCA 72 bp AGGTTCTCATTTGGGCTTGCTGTTGAAGAGTTTTCCTaGCCTAGGCAGCATGATGGACTAGCAAATCCACAA +
Preference number: 6 (lower is better)
Translates to: RFSFGLAVEEFS*PRQHDGLANPQ
Trigger: TTGTGGATTTGCTAGTCCATCATGCTGCCTAGGGCAGGAAAACTCTTCAACAGCAAGCCCAAATGAGAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469275.5
CDS CAA 90 bp GTAGGGGTCTTGGAACTGAGAGGCCGGGTCCTGGTAAAGATACATTaGACAGACGTCTCTTTCTTACTCCACTACAGTTATTTGGAATCT +
Preference number: 6 (lower is better)
Translates to: VGVLELRGRVLVKIH*TDVSFLLHYSYLES
Trigger: AGATTCCAAATAACTGTAGTGGAGTAAGAAAGAGACGTCTGTCAAATGTATCTTTACCAGGACCCGGCCTCTCAGTTCCAAGACCCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443187.1
ENST00000475912.1
ENST00000494667.5
CDS CAA 90 bp TGTGTGGAACTTTCACTCTGCACATTACCATCTTTTCCATCCAGATaGGGCGACCACTCCAAGAAGGAATTCTCTTACTTGGTTCCTGGT +
Preference number: 6 (lower is better)
Translates to: CVELSLCTLPSFPSR*GDHSKKEFSYLVPG
Trigger: ACCAGGAACCAAGTAAGAGAATTCCTTCTTGGAGTGGTCGCCCAATCTGGATGGAAAAGATGGTAATGTGCAGAGTGAAAGTTCCACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443187.1
ENST00000475912.1
ENST00000494667.5
CDS CCA 72 bp TGGCAGTTGAATTTGCAATCTTTACACTGCATTCCTTaGCGAAAGAGGCCTTTCAGTAACCGCTTGCAGTAC +
Preference number: 6 (lower is better)
Translates to: WQLNLQSLHCIP*RKRPFSNRLQY
Trigger: GTACTGCAAGCGGTTACTGAAAGGCCTCTTTCGCCAAGGAATGCAGTGTAAAGATTGCAAATTCAACTGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000475912.1
ENST00000494667.5
CDS CAA 72 bp AGTAGAAATGAAACTGTATGCACTGAGCCTCTGGAGTaGGTGAGTGATGGTGCACTGAAGCTTCCATTAGAG +
Preference number: 6 (lower is better)
Translates to: SRNETVCTEPLE*VSDGALKLPLE
Trigger: CTCTAATGGAAGCTTCAGTGCACCATCACTCACCAACTCCAGAGGCTCAGTGCATACAGTTTCATTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000494667.5
CDS CAA 90 bp AAAAACAATGAGCGGAATAGAAAGTACCCTCCCAAACTGGAATATTaGGAGCCCAGGAGAGGTTCTCATTTGGGCTTGCTGTTGAAGAGT +
Preference number: 6 (lower is better)
Translates to: KNNERNRKYPPKLEY*EPRRGSHLGLLLKS
Trigger: ACTCTTCAACAGCAAGCCCAAATGAGAACCTCTCCTGGGCTCCAAATATTCCAGTTTGGGAGGGTACTTTCTATTCCGCTCATTGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000469275.5
CDS CCA 72 bp ACTTGTAGACAAATCTTTGTGATCTTTCCCTTGCCCTaGAGAAGTGCAAACACTTGCTTGAGGAGTAACAGG +
Preference number: 6 (lower is better)
Translates to: TCRQIFVIFPLP*RSANTCLRSNR
Trigger: CCTGTTACTCCTCAAGCAAGTGTTTGCACTTCTCCAGGGCAAGGGAAAGATCACAAAGATTTGTCTACAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443977.1
ENST00000469275.5
ENST00000494667.5
CDS CAA 72 bp TTGGAACTGAGAGGCCGGGTCCTGGTAAAGATACATTaGACAGACGTCTCTTTCTTACTCCACTACAGTTAT +
Preference number: 6 (lower is better)
Translates to: LELRGRVLVKIH*TDVSFLLHYSY
Trigger: ATAACTGTAGTGGAGTAAGAAAGAGACGTCTGTCAAATGTATCTTTACCAGGACCCGGCCTCTCAGTTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443187.1
ENST00000475912.1
ENST00000494667.5
CDS CAA 90 bp ATCCACCCTTCCTTCACCATTGTGCTGCTCTTCCTCTTTGTGTGCTaGATGGATTGTACAACCCTCATTAGCGGAATATTATTGCTTGTT +
Preference number: 6 (lower is better)
Translates to: IHPSFTIVLLFLFVC*MDCTTLISGILLLV
Trigger: AACAAGCAATAATATTCCGCTAATGAGGGTTGTACAATCCATCAAGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGGAAGGGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000469275.5
ENST00000494667.5
CDS TCA 72 bp CCTTCACCATTGTGCTGCTCTTCCTCTTTGTGTGCTTaGTGGATTGTACAACCCTCATTAGCGGAATATTAT +
Preference number: 6 (lower is better)
Translates to: PSPLCCSSSLCA*WIVQPSLAEYY
Trigger: ATAATATTCCGCTAATGAGGGTTGTACAATCCATCAAGCACACAAAGAGGAAGAGCAGCACAATGGTGAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000469275.5
ENST00000494667.5
CDS CAA 72 bp AGAGATACTTGTAGACAAATCTTTGTGATCTTTCCCTaGCCCTGGAGAAGTGCAAACACTTGCTTGAGGAGT +
Preference number: 6 (lower is better)
Translates to: RDTCRQIFVIFP*PWRSANTCLRS
Trigger: ACTCCTCAAGCAAGTGTTTGCACTTCTCCAGGGCAAGGGAAAGATCACAAAGATTTGTCTACAAGTATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000443977.1
ENST00000469275.5
ENST00000494667.5
CDS CAA 72 bp AACCCAAAGGGTAATAGATATTGTGAGAGAAGTATGTaGGGTAGCAGGAGTACCAAAGGGGAACCATGTTTT +
Preference number: 6 (lower is better)
Translates to: NPKGNRYCERSM*GSRSTKGEPCF
Trigger: AAAACATGGTTCCCCTTTGGTACTCCTGCTACCCAACATACTTCTCTCACAATATCTATTACCCTTTGGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494667.5
CDS CCA 72 bp ATCAATTGCTTCACCAGAAATTTCTCTCCATGGATTTaGTGGGTACATAAATGCAGCATTTTGGATTTGGTC +
Preference number: 6 (lower is better)
Translates to: INCFTRNFSPWI*WVHKCSILDLV
Trigger: GACCAAATCCAAAATGCTGCATTTATGTACCCACCAAATCCATGGAGAGAAATTTCTGGTGAAGCAATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS CAA 90 bp TCTGTGTCATCCAAACCCCGACTACTATCACTATTTATGTCATTATaGTCAATATCCATTGGTATATCTGTATCTGTTCCCAGACTGGAA +
Preference number: 6 (lower is better)
Translates to: SVSSKPRLLSLFMSL*SISIGISVSVPRLE
Trigger: TTCCAGTCTGGGAACAGATACAGATATACCAATGGATATTGACAATAATGACATAAATAGTGATAGTAGTCGGGGTTTGGATGACACAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000494667.5
CDS CCA 72 bp AATTGCTTCACCAGAAATTTCTCTCCATGGATTTGGTaGGTACATAAATGCAGCATTTTGGATTTGGTCATT +
Preference number: 6 (lower is better)
Translates to: NCFTRNFSPWIW*VHKCSILDLVI
Trigger: AATGACCAAATCCAAAATGCTGCATTTATGTACCCACCAAATCCATGGAGAGAAATTTCTGGTGAAGCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000234179.8
ENST00000379066.5
CDS CAA 72 bp AGAACAATCATGCCAACAGTAGACAAATGGTGCCATTaGTGTTGGAAAACTAGTAGGGAATATACTTCAATG +
Preference number: 6 (lower is better)
Translates to: RTIMPTVDKWCH*CWKTSREYTSM
Trigger: CATTGAAGTATATTCCCTACTAGTTTTCCAACACAAATGGCACCATTTGTCTACTGTTGGCATGATTGTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494667.5
CDS CAA 90 bp ACGAAGTATACCATAGTATCAGTAATGATTTCAAAACAGTGTGGATaGCTGCCTTGTGAAATGTTTGTGAAATCTCGTGGTGAAGATATG +
Preference number: 6 (lower is better)
Translates to: TKYTIVSVMISKQCG*LPCEMFVKSRGEDM
Trigger: CATATCTTCACCACGAGATTTCACAAACATTTCACAAGGCAGCAATCCACACTGTTTTGAAATCATTACTGATACTATGGTATACTTCGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000234179.8
ENST00000379066.5
ENST00000469275.5
ENST00000494667.5
CDS CAA 90 bp AGACTTAATAGAACAATCATGCCAACAGTAGACAAATGGTGCCATTaGTGTTGGAAAACTAGTAGGGAATATACTTCAATGAATAAGCCC +
Preference number: 6 (lower is better)
Translates to: RLNRTIMPTVDKWCH*CWKTSREYTSMNKP
Trigger: GGGCTTATTCATTGAAGTATATTCCCTACTAGTTTTCCAACACAAATGGCACCATTTGTCTACTGTTGGCATGATTGTTCTATTAAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494667.5
CDS CAA 90 bp AATAATGTAAACCCAAAGGGTAATAGATATTGTGAGAGAAGTATGTaGGGTAGCAGGAGTACCAAAGGGGAACCATGTTTTTATTTGATG +
Preference number: 6 (lower is better)
Translates to: NNVNPKGNRYCERSM*GSRSTKGEPCFYLM
Trigger: CATCAAATAAAAACATGGTTCCCCTTTGGTACTCCTGCTACCCAACATACTTCTCTCACAATATCTATTACCCTTTGGGTTTACATTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494667.5
CDS TCA 72 bp AAACAGTTGAAGATGCTAACGCACAGTAAGGTTAAATaGCTTCATCAATATCCTAAATCGCAAAGTTGGATT +
Preference number: 6 (lower is better)
Translates to: KQLKMLTHSKVK*LHQYPKSQSWI
Trigger: AATCCAACTTTGCGATTTAGGATATTGATGAAGTCATTTAACCTTACTGTGCGTTAGCATCTTCAACTGTTT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494667.5