RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000105287

Ensembl transcript IDs: ENST00000291281.9, ENST00000433867.5, ENST00000593363.1, ENST00000593492.1, ENST00000595132.5, ENST00000595515.5, ENST00000597088.1, ENST00000597390.5, ENST00000597589.5, ENST00000597641.1, ENST00000598633.1, ENST00000599019.5, ENST00000599464.1, ENST00000600194.5, ENST00000601605.5, ENST00000601806.5

Found 724 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCAGCCGTGCAGGGCAGGGACTCGGAGGTGCCGAGGCGCACCGAGTaGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTTGCGGGCC +
Preference number: 1 (lower is better)
Translates to: SAVQGRDSEVPRRTE*PLARDVDDRRRLRA
Trigger: GGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCACGGCTGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR GCA 90 bp GGCGAGGCAGGAGTTCGGTGGTGCTACGGCTCAGCTCTTCAGCCGTaGAGGGCAGGGACTCGGAGGTGCCGAGGCGCACCGAGTGGCCAC +
Preference number: 1 (lower is better)
Translates to: GEAGVRWCYGSALQP*RAGTRRCRGAPSGH
Trigger: GTGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCACGGCTGAAGAGCTGAGCCGTAGCACCACCGAACTCCTGCCTCGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR CCA 90 bp TGCAGGGCAGGGACTCGGAGGTGCCGAGGCGCACCGAGTGGCCACTaGCCAGAGACGTGGATGACAGGCGCCGTTTGCGGGCCCCACTAC +
Preference number: 1 (lower is better)
Translates to: CRAGTRRCRGAPSGH*PETWMTGAVCGPHY
Trigger: GTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR CCA 90 bp AACACTGATGCGCTCCGCCAGCCCCTGCATGTCGTGGTCCTGTGGTaGACAGGCCCCACCGAGATCCCTGTCCGTGGGCAGCCCAGACCC +
Preference number: 1 (lower is better)
Translates to: NTDALRQPLHVVVLW*TGPTEIPVRGQPRP
Trigger: GGGTCTGGGCTGCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATCAGTGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 90 bp CCACCGAGATCCCTGTCCGTGGGCAGCCCAGACCCAGGCAGCGGATaGTCTGCTGCAAACTGCTCCCAGCGCGCGTCGTCACTCTCATGC +
Preference number: 1 (lower is better)
Translates to: PPRSLSVGSPDPGSG*SAANCSQRASSLSC
Trigger: GCATGAGAGTGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGGACAGGGATCTCGGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 90 bp TGCTACGGCTCAGCTCTTCAGCCGTGCAGGGCAGGGACTCGGAGGTaGCGAGGCGCACCGAGTGGCCACTGGCCAGAGACGTGGATGACA +
Preference number: 1 (lower is better)
Translates to: CYGSALQPCRAGTRR*RGAPSGHWPETWMT
Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCACGGCTGAAGAGCTGAGCCGTAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR CCA 90 bp GAGAACACTGATGCGCTCCGCCAGCCCCTGCATGTCGTGGTCCTGTaGTGGACAGGCCCCACCGAGATCCCTGTCCGTGGGCAGCCCAGA +
Preference number: 1 (lower is better)
Translates to: ENTDALRQPLHVVVL*WTGPTEIPVRGQPR
Trigger: TCTGGGCTGCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 90 bp GGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCATGTCGTaGTCCTGTGGTGGACAGGCCCCACCGAGATCCCTGTCCGTGGGC +
Preference number: 1 (lower is better)
Translates to: GPQRTLMRSASPCMS*SCGGQAPPRSLSVG
Trigger: GCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 90 bp ACTCGGAGGTGCCGAGGCGCACCGAGTGGCCACTGGCCAGAGACGTaGATGACAGGCGCCGTTTGCGGGCCCCACTACAGTTGTTGGGGA +
Preference number: 1 (lower is better)
Translates to: TRRCRGAPSGHWPET*MTGAVCGPHYSCWG
Trigger: TCCCCAACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCACCTCCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR GCA 90 bp GAGGGCACAGGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTaGATGTCGTGGTCCTGTGGTGGACAGGCCCCACCGAGATCCCTG +
Preference number: 1 (lower is better)
Translates to: EGTGPQRTLMRSASP*MSWSCGGQAPPRSL
Trigger: CAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCCTGTGCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 90 bp TGTCGTGGTCCTGTGGTGGACAGGCCCCACCGAGATCCCTGTCCGTaGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCT +
Preference number: 1 (lower is better)
Translates to: CRGPVVDRPHRDPCP*AAQTQAADALLQTA
Trigger: AGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 90 bp GAGATCCCTGTCCGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTaGTGCAAACTGCTCCCAGCGCGCGTCGTCACTCTCATGCGTGAT +
Preference number: 1 (lower is better)
Translates to: EIPVRGQPRPRQRML*CKLLPARVVTLMRD
Trigger: ATCACGCATGAGAGTGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGGACAGGGATCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 90 bp TCCGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTaGTCCCAGCGCGCGTCGTCACTCTCATGCGTGATGTATCGCTCT +
Preference number: 1 (lower is better)
Translates to: SVGSPDPGSGCSAAN*SQRASSLSCVMYRS
Trigger: AGAGCGATACATCACGCATGAGAGTGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR TCA 90 bp GAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCACGCCCACTaGCCACATGTCCAGCGAGCGGTTGTAGCCCTGGTTGAGCAGCAC +
Preference number: 1 (lower is better)
Translates to: EREGAAEADVHDHAH*PHVQRAVVALVEQH
Trigger: GTGCTGCTCAACCAGGGCTACAACCGCTCGCTGGACATGTGGTCAGTGGGCGTGATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 90 bp TGGCTCCAGGGGCTGGCCGGGTACATGAAGGCGGCGTTCTGGATCTaGTCATTGATGTCCTCATCCTCGTTGAAAGGGAAGGTGCCGCTG +
Preference number: 1 (lower is better)
Translates to: WLQGLAGYMKAAFWI*SLMSSSSLKGKVPL
Trigger: CAGCGGCACCTTCCCTTTCAACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCCCCTGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 90 bp GAGATGTGGCTCCAGGGGCTGGCCGGGTACATGAAGGCGGCGTTCTaGATCTGGTCATTGATGTCCTCATCCTCGTTGAAAGGGAAGGTG +
Preference number: 1 (lower is better)
Translates to: EMWLQGLAGYMKAAF*IWSLMSSSSLKGKV
Trigger: CACCTTCCCTTTCAACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCCCCTGGAGCCACATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGAC +
Preference number: 1 (lower is better)
Translates to: PIQFGQEATFPRTVH*WDPVKNRCGGQQLD
Trigger: GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
3UTR-3UTR GCA 90 bp CCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCGCGTCGTCACCAGGTAGGCCGGCGTaGCCACCACTGAGCGGCGGA +
Preference number: 2 (lower is better)
Translates to: PDPGSGCSAANCSQRASSPGRPA*PPLSGG
Trigger: TCCGCCGCTCAGTGGTGGGCACGCCGGCCTACCTGG...TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CAA 90 bp CGCACCGAGTGGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTaGCGGGCCCCACTACAGTTGTTGGGGATGCTGAAGGCACAGCGC +
Preference number: 2 (lower is better)
Translates to: RTEWPLARDVDDRRR*RAPLQLLGMLKAQR
Trigger: GCGCTGTGCCTTCAGCATCCCCAACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR-3UTR TCA 90 bp CGGCGAGGCAGGAGTTCGGTGGTGCTACGGCTCAGCTCTTCAGCCGTGCAGGGCAGTTGTTGGGGATGCTaGAGGCACAGCGCTTGTGGT +
Preference number: 2 (lower is better)
Translates to: RRGRSSVVLRLSSSAVQGSCWGC*RHSACG
Trigger: ACCACAAGCGCTGTGCCTTCAGCATCCCCAACAACT...GCCCTGCACGGCTGAAGAGCTGAGCCGTAGCACCACCGAACTCCTGCCTCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR-3UTR GCA 90 bp GGACGAGGGCACAGGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCATTGCTCTGCTGCAAACTaGTCCCAGCGCGCGTCGTCA +
Preference number: 2 (lower is better)
Translates to: GRGHRTSENTDALRQPLHCSAAN*SQRASS
Trigger: TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCA...ATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCCTGTGCCCTCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR GCA 90 bp TCCTCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCACGGAGCAGCACCTCGGGTaGCAGGTAGGCCGGCGTGCC +
Preference number: 2 (lower is better)
Translates to: SSSSLKGKVPLRLTYMITEQHLG*QVGRRA
Trigger: GGCACGCCGGCCTACCTGGCACCCGAGGTGCTGCTC...CGTGATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACATGTGAAGAACCGCTGTaGAGGGCAGCAGCTGGACGA +
Preference number: 2 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTCEEPL*RAAAGR
Trigger: TCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACA...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
3UTR CAA 90 bp CAGGGGCTGGCCGGGTACATGAAGGCGGCGTTCTGGATCTGGTCATaGATGTCCTCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTG +
Preference number: 2 (lower is better)
Translates to: QGLAGYMKAAFWIWS*MSSSSLKGKVPLRL
Trigger: CAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR TCA 90 bp CCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCGCGTCGTCAAGGAAATGGGTCTGCTaGTGCCAGCAACACGTTTTC +
Preference number: 2 (lower is better)
Translates to: PDPGSGCSAANCSQRASSRKWVC*CQQHVF
Trigger: GAAAACGTGTTGCTGGCATCAGCAGACCCATTTCCT...TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR TCA 90 bp ACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCATGTCGTGGTCCTGTGGCGTCACTCTCATGCGTaGTGTATCGCTCTCCCATCT +
Preference number: 2 (lower is better)
Translates to: TSENTDALRQPLHVVVLWRHSHA*CIALPS
Trigger: AGATGGGAGAGCGATACATCACGCATGAGAGTGACG...CCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR CCA 90 bp TGGCTCCAGGGGCTGGCCGGGTACATGAAGGCGGCGTTCTGGATCTGGTCATTGGTCCGTTTTAATTGCTaGGGAAACAGGGAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: WLQGLAGYMKAAFWIWSLVRFNC*GNREGP
Trigger: AGGCCCCTCCCTGTTTCCCCAGCAATTAAAACGGAC...CAATGACCAGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCCCCTGGAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR TCA 90 bp CCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCGCGTCGTCAAGTGGACAATGTTCTTaGAGTGAAGGTGTCTCAAAG +
Preference number: 2 (lower is better)
Translates to: PDPGSGCSAANCSQRASSSGQCS*SEGVSK
Trigger: CTTTGAGACACCTTCACTTCAAGAACATTGTCCACT...TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CAA 90 bp ATGAAGGCGGCGTTCTGGATCTGGTCATTGATGTCCTCATCCTCGTaGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCACGCCC +
Preference number: 2 (lower is better)
Translates to: MKAAFWIWSLMSSSS*KGKVPLRLTYMITP
Trigger: GGGCGTGATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGCTGGCCGGGTACATaGAGGCGGCGTTCTGGATCT +
Preference number: 2 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCGWPGT*RRRSGS
Trigger: AGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGAGAGTGCCGTGTGCTaGGATCAAGGCCATGGGGCC +
Preference number: 2 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCESAVC*DQGHGA
Trigger: GGCCCCATGGCCTTGATCTCAGCACACGGCACTCTC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
3UTR-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAAC +
Preference number: 2 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTPRTVH*WDPVKN
Trigger: GTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
3UTR-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGTGAAGAACCGCTGTaGAGGGCAGCAGCTGGACGA +
Preference number: 2 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHCEEPL*RAAAGR
Trigger: TCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
3UTR-3UTR TCA 90 bp GCGTCGTCACTCTCATGCGTGATGTATCGCTCTCCCATCTTCCCCTCCAGCTCTTCACACAGCTTCACCTaGGGAAATGGGTCTGCTGAT +
Preference number: 2 (lower is better)
Translates to: ASSLSCVMYRSPIFPSSSSHSFT*GNGSAD
Trigger: ATCAGCAGACCCATTTCCTCAGGTGAAGCTGTGTGA...AGAGCTGGAGGGGAAGATGGGAGAGCGATACATCACGCATGAGAGTGACGACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTTGTGAAGAACCGCTGTaGAGGGCAGCAGCTGGACGA +
Preference number: 2 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFICEEPL*RAAAGR
Trigger: TCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACA...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
3UTR-3UTR TCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCAATTGCTGGGATCCTGTaGAGAACCGCTGTGGAGGGC +
Preference number: 2 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPIAGIL*RTAVEG
Trigger: GCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAAT...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
3UTR-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGTCCGTTTTAATTGCTaGGGAAACAGGGAGGGGCCT +
Preference number: 2 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCVRFNC*GNREGP
Trigger: AGGCCCCTCCCTGTTTCCCCAGCAATTAAAACGGAC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
3UTR-3UTR CCA 90 bp TCCTCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCACGCAGCAACACGTTTTCTaGTTTCAAGTCACAGTGGAC +
Preference number: 2 (lower is better)
Translates to: SSSSLKGKVPLRLTYMITQQHVF*FQVTVD
Trigger: GTCCACTGTGACTTGAAACCAGAAAACGTGTTGCTG...CGTGATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR GCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCACCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAAC +
Preference number: 2 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPPRTVH*WDPVKN
Trigger: GTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
3UTR CCA 72 bp GCGCTCCGCCAGCCCCTGCATGTCGTGGTCCTGTGGTaGACAGGCCCCACCGAGATCCCTGTCCGTGGGCAG +
Preference number: 3 (lower is better)
Translates to: ALRQPLHVVVLW*TGPTEIPVRGQ
Trigger: CTGCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGGGGCTGGCGGAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 72 bp GGGACTCGGAGGTGCCGAGGCGCACCGAGTGGCCACTaGCCAGAGACGTGGATGACAGGCGCCGTTTGCGGG +
Preference number: 3 (lower is better)
Translates to: GTRRCRGAPSGH*PETWMTGAVCG
Trigger: CCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR GCA 72 bp TCAGCTCTTCAGCCGTGCAGGGCAGGGACTCGGAGGTaGCGAGGCGCACCGAGTGGCCACTGGCCAGAGACG +
Preference number: 3 (lower is better)
Translates to: SALQPCRAGTRR*RGAPSGHWPET
Trigger: CGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCACGGCTGAAGAGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR CCA 72 bp CCTGTGGTGGACAGGCCCCACCGAGATCCCTGTCCGTaGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: PVVDRPHRDPCP*AAQTQAADALL
Trigger: CAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 72 bp GATGCGCTCCGCCAGCCCCTGCATGTCGTGGTCCTGTaGTGGACAGGCCCCACCGAGATCCCTGTCCGTGGG +
Preference number: 3 (lower is better)
Translates to: DALRQPLHVVVL*WTGPTEIPVRG
Trigger: CCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 72 bp GTCCGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTaGTGCAAACTGCTCCCAGCGCGCGTCGTCACTCTC +
Preference number: 3 (lower is better)
Translates to: VRGQPRPRQRML*CKLLPARVVTL
Trigger: GAGAGTGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 72 bp TCCCTGTCCGTGGGCAGCCCAGACCCAGGCAGCGGATaGTCTGCTGCAAACTGCTCCCAGCGCGCGTCGTCA +
Preference number: 3 (lower is better)
Translates to: SLSVGSPDPGSG*SAANCSQRASS
Trigger: TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGGACAGGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR CAA 90 bp TCTTCAGCCGTGCAGGGCAGGGACTCGGAGGTGCCGAGGCGCACCGAGTGGCCACGGGCCCCACTACAGTaGTTGGGGATGCTGAAGGCA +
Preference number: 3 (lower is better)
Translates to: SSAVQGRDSEVPRRTEWPRAPLQ*LGMLKA
Trigger: TGCCTTCAGCATCCCCAACAACTGTAGTGGGGCCCG...TGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCACGGCTGAAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR GCA 72 bp GGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTaGATGTCGTGGTCCTGTGGTGGACAGGCCCCACCG +
Preference number: 3 (lower is better)
Translates to: GPQRTLMRSASP*MSWSCGGQAPP
Trigger: CGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR CAA 90 bp TCTTCAGCCGTGCAGGGCAGGGACTCGGAGGTGCCGAGGCGCACCGAGTGGCCAGCCCCACTACAGTTGTaGGGGATGCTGAAGGCACAG +
Preference number: 3 (lower is better)
Translates to: SSAVQGRDSEVPRRTEWPAPLQL*GMLKAQ
Trigger: CTGTGCCTTCAGCATCCCCAACAACTGTAGTGGGGC...TGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCACGGCTGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR TCA 72 bp GAGGCGCACCGAGTGGCCACTGGCCAGAGACGTGGATaGCAGGCGCCGTTTGCGGGCCCCACTACAGTTGTT +
Preference number: 3 (lower is better)
Translates to: EAHRVATGQRRG*QAPFAGPTTVV
Trigger: AACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR CCA 72 bp AGAACACTGATGCGCTCCGCCAGCCCCTGCATGTCGTaGTCCTGTGGTGGACAGGCCCCACCGAGATCCCTG +
Preference number: 3 (lower is better)
Translates to: RTLMRSASPCMS*SCGGQAPPRSL
Trigger: CAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATCAGTGTTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 72 bp AAGAGGATGACGGGGGACGGCGAGGCAGGAGTTCGGTaGTGCTACGGCTCAGCTCTTCAGCCGTGCAGGGCA +
Preference number: 3 (lower is better)
Translates to: KRMTGDGEAGVR*CYGSALQPCRA
Trigger: TGCCCTGCACGGCTGAAGAGCTGAGCCGTAGCACCACCGAACTCCTGCCTCGCCGTCCCCCGTCATCCTCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR GCA 72 bp AGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTaGTCCCAGCGCGCGTCGTCACTCTCATGCGTGATG +
Preference number: 3 (lower is better)
Translates to: SPDPGSGCSAAN*SQRASSLSCVM
Trigger: CATCACGCATGAGAGTGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR CAA 90 bp GTCCAGCGAGCGGTTGTAGCCCTGGTTGAGCAGCACCTCGGGTGCCAGGTAGGCCGTGTCCCATCCAGTTaGGGCAGGAAGCCACTTTCC +
Preference number: 3 (lower is better)
Translates to: VQRAVVALVEQHLGCQVGRVPSS*GRKPLS
Trigger: GGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACG...GCCTACCTGGCACCCGAGGTGCTGCTCAACCAGGGCTACAACCGCTCGCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR CAA 90 bp GCTCCAGCTGAGATGTGGCTCCAGGGGCTGGCCGGGTACATGAAGGCGGCGTTCATGTCCTCATCCTCGTaGAAAGGGAAGGTGCCGCTG +
Preference number: 3 (lower is better)
Translates to: APAEMWLQGLAGYMKAAFMSSSS*KGKVPL
Trigger: CAGCGGCACCTTCCCTTTCAACGAGGATGAGGACAT...GAACGCCGCCTTCATGTACCCGGCCAGCCCCTGGAGCCACATCTCAGCTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR TCA 72 bp GGTGCCGCTGAGGCTGACGTACATGATCACGCCCACTaGCCACATGTCCAGCGAGCGGTTGTAGCCCTGGTT +
Preference number: 3 (lower is better)
Translates to: GAAEADVHDHAH*PHVQRAVVALV
Trigger: AACCAGGGCTACAACCGCTCGCTGGACATGTGGTCAGTGGGCGTGATCATGTACGTCAGCCTCAGCGGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 72 bp GCTGCAAACTGCTCCCAGCGCGCGTCGTCACTCTCATaGGTGATGTATCGCTCTCCCATCTTCCCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: AANCSQRASSLS*VMYRSPIFPSS
Trigger: GCTGGAGGGGAAGATGGGAGAGCGATACATCACGCATGAGAGTGACGACGCGCGCTGGGAGCAGTTTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR-3UTR CAA 90 bp GCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCGCGTTTCTGGATCTGGTCATaGATGTCCTCATCCTCGTTG +
Preference number: 3 (lower is better)
Translates to: AAQTQAADALLQTAPSARFWIWS*MSSSSL
Trigger: CAACGAGGATGAGGACATCAATGACCAGATCCAGAA...ACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR TCA 72 bp CAAACTGCTCCCAGCGCGCGTCGTCACTCTCATGCGTaGTGTATCGCTCTCCCATCTTCCCCTCCAGCTCTC +
Preference number: 3 (lower is better)
Translates to: QTAPSARRHSHA*CIALPSSPPAL
Trigger: GAGAGCTGGAGGGGAAGATGGGAGAGCGATACATCACGCATGAGAGTGACGACGCGCGCTGGGAGCAGTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR TCA 72 bp CCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTaGAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGG +
Preference number: 3 (lower is better)
Translates to: PLSLEQFIAGIL*RTAVEGSSWTR
Trigger: CCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
3UTR TCA 72 bp CCAGCCACGTCTGGTACTCCTGTAACCAGGGGTGGCTaGGAGATTTGTCCACGCTGTAGCGTTTGCGCATCT +
Preference number: 3 (lower is better)
Translates to: PATSGTPVTRGG*EICPRCSVCAS
Trigger: AGATGCGCAAACGCTACAGCGTGGACAAATCTCTCAGCCACCCCTGGTTACAGGAGTACCAGACGTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR CCA 72 bp GGGCTGGCCGGGTACATGAAGGCGGCGTTCTGGATCTaGTCATTGATGTCCTCATCCTCGTTGAAAGGGAAG +
Preference number: 3 (lower is better)
Translates to: GLAGYMKAAFWI*SLMSSSSLKGK
Trigger: CTTCCCTTTCAACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
3UTR GCA 72 bp TTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: FGQEATFPRTVH*WDPVKNRCGGQ
Trigger: CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCGAGGCGCACCGAGTGGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTTGCGCAGCCATCGCACTTaGGGCCCTGGCGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: PRRTEWPLARDVDDRRRLRSHRT*GPGALG
Trigger: GCCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCG...CAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR TCA 90 bp TCCTGTGGTGGACAGGCCCCACCGAGATCCCTGTCCGTGGGCAGCCCAGACCCACGGCGTGCCCACCACTaGGCGGCGGAACGACTTCTC +
Preference number: 4 (lower is better)
Translates to: SCGGQAPPRSLSVGSPDPRRAHH*AAERLL
Trigger: GAGAAGTCGTTCCGCCGCTCAGTGGTGGGCACGCCG...TGGGTCTGGGCTGCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp GGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTTGCGGGCCCCACTACAGTGCAGGGACTCGGAGGTaGCGAGGCGCACCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: GHWPETWMTGAVCGPHYSAGTRR*RGAPSG
Trigger: GCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGC...ACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAGCGGTGGCGGCGACTaGAGCTCTAGGCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTSGGGD*SSRPPG
Trigger: CCCCGGCGGCCTAGAGCTGCAGTCGCCGCCACCGCT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR GCA 90 bp GGACGAGGGCACAGGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCATGAGCAGCACCTCGGGTaGCAGGTAGGCCGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: GRGHRTSENTDALRQPLHEQHLG*QVGRRA
Trigger: GGCACGCCGGCCTACCTGGCACCCGAGGTGCTGCTC...ATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCCTGTGCCCTCGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp GAGGTGCCGAGGCGCACCGAGTGGCCACTGGCCAGAGACGTGGATGACAGGCGCTCGCACTTGAGGCCCTaGCGCACTAGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: EVPRRTEWPLARDVDDRRSHLRP*RTRPKS
Trigger: GCTCTTCGGCCTAGTGCGCCAGGGCCTCAAGTGCGA...GCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCACCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAGCCCCCTGCCCACTTaGCCCACCCGGAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTSPLPT*PTRSPA
Trigger: GGCGGGACTCCGGGTGGGCCAAGTGGGCAGGGGGCT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACATTCGGTCGGGAGCCGTaGGGAAGGGGGCGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTFGREP*GRGRCR
Trigger: CCGGCAACGCCCCCTTCCTCACGGCTCCCGACCGAA...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TCCTGTGGTGGACAGGCCCCACCGAGATCCCTGTCCGTGGGCAGCCCAGACCCAGACCTCAGAGAACACTaGTGCGCTCCGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SCGGQAPPRSLSVGSPDPDLREH*CAPPAP
Trigger: AGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTC...TGGGTCTGGGCTGCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp GGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTTGCGGGCCCCACTACAGTTGCACCGTGAGGGCGTaGGGGCGGATCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: GHWPETWMTGAVCGPHYSCTVRA*GRIWKS
Trigger: GGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCA...ACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCTCAGGGCCTGGCGGATaGCTGTCTCCCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGSGPGG*LSPSPG
Trigger: CCCGGGGCTGGGAGACAGCCATCCGCCAGGCCCTGA...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GGACGAGGGCACAGGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCATGCTCCAGCTGAGATGTaGCTCCAGGGGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GRGHRTSENTDALRQPLHAPAEM*LQGLAG
Trigger: CCCGGCCAGCCCCTGGAGCCACATCTCAGCTGGAGC...ATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCCTGTGCCCTCGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp CGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGGTCGTGGTCCTGTGGTaGACAGGCCCCACCGAGATC +
Preference number: 4 (lower is better)
Translates to: RGQPRPRQRMLCCKLLPAVVVLW*TGPTEI
Trigger: GATCTCGGTGGGGCCTGTCCACCACAGGACCACGAC...CGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp GGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTTGCGGGCCCCACTACAGTAGCATCTCCCCGCAGTaGTCACAGAAGGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GHWPETWMTGAVCGPHYSSISPQ*SQKAGA
Trigger: GGCGCCTGCCTTCTGTGATCACTGCGGGGAGATGCT...ACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACGCAGCCATCGCACTTaGGGCCCTGGCGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTRSHRT*GPGALG
Trigger: GCCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGACCCAGGCAGCGGATaGTCTGCTGCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PWAAQTQAADALLQTAPSDPGSG*SAANCS
Trigger: GGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTC...GCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp CGGCGAGGCAGGAGTTCGGTGGTGCTACGGCTCAGCTCTTCAGCCGTGCAGGGCCACTGGCCAGAGACGTaGATGACAGGCGCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: RRGRSSVVLRLSSSAVQGHWPET*MTGAVC
Trigger: GCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTG...GCCCTGCACGGCTGAAGAGCTGAGCCGTAGCACCACCGAACTCCTGCCTCGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR CCA 90 bp CCGAGGCGCACCGAGTGGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTTGGCACCGAGTGGCCACTaGCCAGAGACGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: PRRTEWPLARDVDDRRRLAPSGH*PETWMT
Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGC...CAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGCTCCAGCTGAGATGTaGCTCCAGGGGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGAPAEM*LQGLAG
Trigger: CCCGGCCAGCCCCTGGAGCCACATCTCAGCTGGAGC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGCGCCGGCGTGGGTTTaGTGGCTGGAAGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGAPAWV*WLEGGA
Trigger: AGCTCCCCCTTCCAGCCACCAAACCCACGCCGGCGC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600194.5
CDS-3UTR CCA 90 bp GGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTTGCGGGCCCCACTACAGTGGTGGCCGAGGCTTCTaGTCCACGATGGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: GHWPETWMTGAVCGPHYSGGRGF*STMEQA
Trigger: GGCCTGTTCCATCGTGGACCAGAAGCCTCGGCCACC...ACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCATCCGCGGGATCTCGTaGGCAGGTGGTGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGIRGIS*AGGGRA
Trigger: CGCTCTCCCACCACCTGCTCACGAGATCCCGCGGAT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGATAGGAGTGCACCGTaGGGGCGTGCGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGDRSAP*GRAGGS
Trigger: AGATCCGCCCGCACGCCCTCACGGTGCACTCCTATC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTTGGGGATGCTGAAGGCACAGCGCTTGTGGTAGTTCAGCCCGCAGCCATCGCAGGCCAGAGACGTGGATaGCAGGCGCCGTTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: VGDAEGTALVVVQPAAIAGQRRG*QAPFAG
Trigger: GCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCC...TGCGATGGCTGCGGGCTGAACTACCACAAGCGCTGTGCCTTCAGCATCCCCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGCGCTGGGTGCGTCCTaGAGGATGACGGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGALGAS*RMTGIR
Trigger: CCTGATGCCCGTCATCCTTCAGGACGCACCCAGCGC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCTGCATGTCGTGGTCCTGTGGTGGACAGGCCCCACCGAGATCCCTGTCCGTGGGTCAATGGCTCCAGCTaGGATGTGGCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PACRGPVVDRPHRDPCPWVNGSS*DVAPGA
Trigger: AGCCCCTGGAGCCACATCTCAGCTGGAGCCATTGAC...CCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp CGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGATTGCTGGGATCCTGTaGAGAACCGCTGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: RGQPRPRQRMLCCKLLPAIAGIL*RTAVEG
Trigger: GCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAAT...CGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGACGAGCGCACCAGCTaGAGGAGGTTGGCCGACGTG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTDERTS*RRLADV
Trigger: CACGTCGGCCAACCTCCTGCAGCTGGTGCGCTCGTC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGACGAGCGCACCAGCTaGAGGAGGTTGGCCGACGTG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGDERTS*RRLADV
Trigger: CACGTCGGCCAACCTCCTGCAGCTGGTGCGCTCGTC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCGCGGCGTCGTCACTCTCATaGGTGATGTATCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GSPDPGSGCSAANCSQRAASSLS*VMYRSP
Trigger: GGGAGAGCGATACATCACGCATGAGAGTGACGACGC...CGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp CTGGACGAGGGCACAGGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCTGCTCTGCTGCAAACTaGTCCCAGCGCGCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: LDEGTGPQRTLMRSASPCCSAAN*SQRASS
Trigger: TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCA...GCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCCTGTGCCCTCGTCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCGCTCCGCCAGCCCCTaGATGTCGTGGTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGRSASP*MSWSCG
Trigger: ACCACAGGACCACGACATGCAGGGGCTGGCGGAGCG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGCGAGCCGGGCAGGATaGCAGCGCCCCAATTGTACG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGASRAG*QRPNCT
Trigger: CGTACAATTGGGGCGCTGGCATCCTGCCCGGCTCGC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600194.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGCGTGCGGGCGGATCTaGAAGTCCTCGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGACGRI*KSSKVA
Trigger: GGCCACCTTCGAGGACTTCCAGATCCGCCCGCACGC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACGGGCATCAGGGCCTaGCGGATGGCTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGTGIRA*RMAVSQ
Trigger: CTGGGAGACAGCCATCCGCCAGGCCCTGATGCCCGT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCAGAGAAGCTTGTCTGTaGGGCGCGTGGCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGREACL*GAWPGA
Trigger: CGCCCCAGGCCACGCGCCCCACAGACAAGCTTCTCT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTTGGGGATGCTGAAGGCACAGCGCTTGTGGTAGTTCAGCCCGCAGCCATCGCAGATAGGAGTGCACCGTaGGGGCGTGCGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: VGDAEGTALVVVQPAAIADRSAP*GRAGGS
Trigger: AGATCCGCCCGCACGCCCTCACGGTGCACTCCTATC...TGCGATGGCTGCGGGCTGAACTACCACAAGCGCTGTGCCTTCAGCATCCCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR GCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGCAGGGACTCGGAGGTaGCGAGGCGCACCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDAGTRR*RGAPSG
Trigger: GCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGCAGCACCTCGGGTaGCAGGTAGGCCGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDEQHLG*QVGRRA
Trigger: GGCACGCCGGCCTACCTGGCACCCGAGGTGCTGCTC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCCCACGCTGTAGCGTTTaGGCATCTTCACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VGSPDPGSGCSAANCSQRPRCSV*ASSPAA
Trigger: TGCTGCAGGTGAAGATGCGCAAACGCTACAGCGTGG...GCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACTCGTGAGCAGGTGGTaGGAGAGCGGGGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTLVSRW*ESGDPR
Trigger: TCTCGGATCCCCGCTCTCCCACCACCTGCTCACGAG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGGAAGTCCTCGAAGGTaGCCGAGGCCGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTGSPRR*PRPTAP
Trigger: TGGTGCTGTCGGCCTCGGCCACCTTCGAGGACTTCC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GGGGATGCTGAAGGCACAGCGCTTGTGGTAGTTCAGCCCGCAGCCATCGCACTTGCGTGCGGGCGGATCTaGAAGTCCTCGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GDAEGTALVVVQPAAIALACGRI*KSSKVA
Trigger: GGCCACCTTCGAGGACTTCCAGATCCGCCCGCACGC...AAGTGCGATGGCTGCGGGCTGAACTACCACAAGCGCTGTGCCTTCAGCATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACATCGCACTTGAGGCCCTaGCGCACTAGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTSHLRP*RTRPKS
Trigger: GCTCTTCGGCCTAGTGCGCCAGGGCCTCAAGTGCGA...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCAAAGCAGTGTGGGTTaGTGCCCGGCGGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGQSSVG*CPAAQG
Trigger: GCCTTGTGCCGCCGGGCACCAACCCACACTGCTTTG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCCGGCCCTTCTCACTaGACAGGATCATCTCCAACA +
Preference number: 4 (lower is better)
Translates to: PWAAQTQAADALLQTAPSAGPSH*TGSSPT
Trigger: TGTTGGAGATGATCCTGTCCAGTGAGAAGGGCCGGC...GCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGTCGTGGTCCTGTGGTaGACAGGCCCCACCGAGATC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTVVVLW*TGPTEI
Trigger: GATCTCGGTGGGGCCTGTCCACCACAGGACCACGAC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCATGTCGTGGTCCTGTaGTGGACAGGCCCCACCGAG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGHVVVL*WTGPTE
Trigger: CTCGGTGGGGCCTGTCCACCACAGGACCACGACATG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCAGCCCCTGCATGTCGTaGTCCTGTGGTGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGSPCMS*SCGGQA
Trigger: GGCCTGTCCACCACAGGACCACGACATGCAGGGGCT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GCTCCAGCTGAGATGTGGCTCCAGGGGCTGGCCGGGTACATGAAGGCGGCGTTCTGTGAAGAACCGCTGTaGAGGGCAGCAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: APAEMWLQGLAGYMKAAFCEEPL*RAAAGR
Trigger: TCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACA...GAACGCCGCCTTCATGTACCCGGCCAGCCCCTGGAGCCACATCTCAGCTGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp CAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGGCCAGAGTTCGGTCGGGAGCCGTaGGGAAGGGGGCGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: QSNDSRVPCAEIKAMGPEFGREP*GRGRCR
Trigger: CCGGCAACGCCCCCTTCCTCACGGCTCCCGACCGAA...CTCTGGCCCCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGGCCAGAGACGTGGATaGCAGGCGCCGTTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDGQRRG*QAPFAG
Trigger: GCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGACACCGGAGTCCTCTaGCTCATCCATGAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGDTGVL*LIHEGA
Trigger: AGCGCCCTCATGGATGAGTCAGAGGACTCCGGTGTC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGTGGAGCGCATTCTCTaGGTGGGAGCCAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTVERIL*VGARDD
Trigger: GTCATCCCTGGCTCCCACTCAGAGAATGCGCTCCAC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGGGCGGACTCCACCGTaGGGATTTCTGACAGCGGAA +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGGRTPP*GFLTAE
Trigger: TTCCGCTGTCAGAAATCCTCACGGTGGAGTCCGCCC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCATGTCGTGGTCCTGTGGCACTCCAAACTGCCCTaGGCCCAGCACTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: TSENTDALRQPLHVVVLWHSKLP*AQHFVR
Trigger: CCTGACGAAGTGCTGGGCTCAGGGCAGTTTGGAGTG...CCACAGGACCACGACATGCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCATGATCACGCCCACTaGCCACATGTCCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGHDHAH*PHVQRA
Trigger: CGCTCGCTGGACATGTGGTCAGTGGGCGTGATCATG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGTCAATGGCTCCAGCTaGGATGTGGCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGVNGSS*DVAPGA
Trigger: AGCCCCTGGAGCCACATCTCAGCTGGAGCCATTGAC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGTCAATGGCTCCAGCTaGGATGTGGCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTVNGSS*DVAPGA
Trigger: AGCCCCTGGAGCCACATCTCAGCTGGAGCCATTGAC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CTGGACGAGGGCACAGGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCGTAACCAGGGGTGGCTaGGAGATTTGTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: LDEGTGPQRTLMRSASPCVTRGG*EICPRC
Trigger: ACAGCGTGGACAAATCTCTCAGCCACCCCTGGTTAC...GCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCCTGTGCCCTCGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCAGGCGGAGGGGACCTaGGGATGGCGGGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQQAEGT*GWRGPW
Trigger: CCAAGGACCCCGCCATCCTCAGGTCCCCTCCGCCTG...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433867.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGCAGCGGGCGGACTGTaGCCCTCCCAGGGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIAAGGL*PSQGRA
Trigger: GGCCCTGCCCTGGGAGGGTCACAGTCCGCCCGCTGC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000600194.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCTTGCATTGCAGGCCCTaGCGGAAGAGGCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGLHCRP*RKRPLR
Trigger: CCTCAAGGGCCTCTTCCGGCAGGGCCTGCAATGCAA...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACATTGCATTGCAGGCCCTaGCGGAAGAGGCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTLHCRP*RKRPLR
Trigger: CCTCAAGGGCCTCTTCCGGCAGGGCCTGCAATGCAA...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACGGAGCTGGCTCTCCTaGTTGGTAGGGAAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTRSWLS*LVGKRS
Trigger: ACTGCGCTTCCCTACCAAGCAGGAGAGCCAGCTCCG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCGCGTCGTCAGGATGCCGCAGGCTCTaGAGAATGGCCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: PDPGSGCSAANCSQRASSGCRRL*RMATSF
Trigger: GAATGAAGTGGCCATTCTGCAGAGCCTGCGGCATCC...TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp CAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGGCCAGAGCCAGGTAGGCCGGCGTaGCCACCACTGAGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: QSNDSRVPCAEIKAMGPEPGRPA*PPLSGG
Trigger: TCCGCCGCTCAGTGGTGGGCACGCCGGCCTACCTGG...CTCTGGCCCCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR GCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGAGCAGCACCTCGGGTaGCAGGTAGGCCGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQEQHLG*QVGRRA
Trigger: GGCACGCCGGCCTACCTGGCACCCGAGGTGCTGCTC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCTGCTCTGCTGCAAACTaGTCCCAGCGCGCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGCSAAN*SQRASS
Trigger: TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCA...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAGGCAGCGGATGCTCTaGTGCAAACTGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTRQRML*CKLLPA
Trigger: CGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCCAGCTGCAGGAGGTTaGCCGACGTGGGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGPAAGG*PTWGHV
Trigger: AACATGACCCCACGTCGGCCAACCTCCTGCAGCTGG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCACTGGCCAGAGACGTaGATGACAGGCGCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGHWPET*MTGAVC
Trigger: GCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGCACCGAGTGGCCACTaGCCAGAGACGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGAPSGH*PETWMT
Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGATCTCAAAGCAGTGTaGGTTGGTGCCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGDLKAV*VGARRH
Trigger: GTGCCGCCGGGCACCAACCCACACTGCTTTGAGATC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGATCTCAAAGCAGTGTaGGTTGGTGCCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTDLKAV*VGARRH
Trigger: GTGCCGCCGGGCACCAACCCACACTGCTTTGAGATC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATAGCCCCCTGCCCACTTaGCCCACCCGGAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHSPLPT*PTRSPA
Trigger: GGCGGGACTCCGGGTGGGCCAAGTGGGCAGGGGGCT...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTGTCTGTGGGGCGCGTaGCCTGGGGCGCTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQCLWGA*PGALGA
Trigger: CGCACCCAGCGCCCCAGGCCACGCGCCCCACAGACA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGTCTGTGGGGCGCGTaGCCTGGGGCGCTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHCLWGA*PGALGA
Trigger: CGCACCCAGCGCCCCAGGCCACGCGCCCCACAGACA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTGTCTGTGGGGCGCGTaGCCTGGGGCGCTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGCLWGA*PGALGA
Trigger: CGCACCCAGCGCCCCAGGCCACGCGCCCCACAGACA...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CTGGACGAGGGCACAGGACCTCAGAGAACACTGATGCGCTCCGCCAGCCCCTGCACTTCATTCCGGAGCTaGCTCTCCTGCTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: LDEGTGPQRTLMRSASPCTSFRS*LSCLVG
Trigger: CCCTACCAAGCAGGAGAGCCAGCTCCGGAATGAAGT...GCAGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTCCTGTGCCCTCGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp GCTGAAGGCACAGCGCTTGTGGTAGTTCAGCCCGCAGCCATCGCACTTGAGGCCGGAAGTCCTCGAAGGTaGCCGAGGCTTCTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: AEGTALVVVQPAAIALEAGSPRR*PRLLVH
Trigger: GTGGACCAGAAGCCTCGGCCACCTTCGAGGACTTCC...GGCCTCAAGTGCGATGGCTGCGGGCTGAACTACCACAAGCGCTGTGCCTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
3UTR CAA 72 bp TGGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTTaGCGGGCCCCACTACAGTTGTTGGGGATGCTGAAG +
Preference number: 4 (lower is better)
Translates to: WPLARDVDDRRR*RAPLQLLGMLK
Trigger: CTTCAGCATCCCCAACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR TCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGATAGGAGTGCACCGTaGGGGCGTGCGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDDRSAP*GRAGGS
Trigger: AGATCCGCCCGCACGCCCTCACGGTGCACTCCTATC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCGCAGCCATCGCACTTaGGGCCCTGGCGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLRSHRT*GPGALG
Trigger: GCCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGCGGCCCGTATACGATaGGGCAGAAGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTAARIR*GRRGGR
Trigger: TCTTCCTCCTCTTCTGCCTCATCGTATACGGGCCGC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCCTCTGACTCATCCATaGGGGCGCTCTTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGPLTHP*GRSCQP
Trigger: AGGCTGACAAGAGCGCCCTCATGGATGAGTCAGAGG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGTGCGTCCTGAAGGATaGCGGGCATCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDVRPEG*RASGPG
Trigger: GCCAGGCCCTGATGCCCGTCATCCTTCAGGACGCAC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGCTCACACAGCTTCACCTaGGGAAATGGGTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: VGSPDPGSGCSAANCSQRSHSFT*GNGSAD
Trigger: ATCAGCAGACCCATTTCCTCAGGTGAAGCTGTGTGA...GCGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCGGCGTGCCCACCACTaGGCGGCGGAACGACTTCTC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLRRAHH*AAERLL
Trigger: GAGAAGTCGTTCCGCCGCTCAGTGGTGGGCACGCCG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCATTGCTGGGATCCTGTaGAGAACCGCTGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGIAGIL*RTAVEG
Trigger: GCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAAT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATAGCGGTGGCGGCGACTaGAGCTCTAGGCCGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDSGGGD*SSRPPG
Trigger: CCCCGGCGGCCTAGAGCTGCAGTCGCCGCCACCGCT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAATGACAGGCGCCGTTTaGGGGCCCCACTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTMTGAV*GPHYSC
Trigger: ACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCAT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGGCAGGGACTCGGAGGTaGCGAGGCGCACCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGAGTRR*RGAPSG
Trigger: GCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGC...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATGCAGGGACTCGGAGGTaGCGAGGCGCACCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHAGTRR*RGAPSG
Trigger: GCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGC...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGCAGGGACTCGGAGGTaGCGAGGCGCACCGAGTGGC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQAGTRR*RGAPSG
Trigger: GCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCTGCATGTCGTGGTCCTGTGGTGGACAGGCCCCACCGAGATCCCTGTCCGTGGGTCAATGACCTTAACTaGCACGTCCCGGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PACRGPVVDRPHRDPCPWVNDLN*HVPACL
Trigger: AAGACAGGCCGGGACGTGGCAGTTAAGGTCATTGAC...CCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGACCACGACATGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCCAGGTAGGCCGGCGTaGCCACCACTGAGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGPGRPA*PPLSGG
Trigger: TCCGCCGCTCAGTGGTGGGCACGCCGGCCTACCTGG...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCCAGGTAGGCCGGCGTaGCCACCACTGAGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQPGRPA*PPLSGG
Trigger: TCCGCCGCTCAGTGGTGGGCACGCCGGCCTACCTGG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGAGCAGCACCTCGGGTaGCAGGTAGGCCGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQEQHLG*QVGRRA
Trigger: GGCACGCCGGCCTACCTGGCACCCGAGGTGCTGCTC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCGACCGGCCAGGGGATaGGCAGAGGGGTCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIRPARG*AEGSRG
Trigger: CCCTCGGGACCCCTCTGCCCATCCCCTGGCCGGTCG...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAGCGCATTCTCTGAGTaGGAGCCAGGGATGACACCG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTSAFSE*EPGMTP
Trigger: CGGTGTCATCCCTGGCTCCCACTCAGAGAATGCGCT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACATCCTCCTCACTGGCGTaGAGCGCATTCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTSSSLA*SAFSEW
Trigger: CCACTCAGAGAATGCGCTCCACGCCAGTGAGGAGGA...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAACAAGGCTGAAGTTCTaGGCGGACTCCACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTTRLKF*ADSTVR
Trigger: CCTCACGGTGGAGTCCGCCCAGAACTTCAGCCTTGT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTCAGGGCCTGGCGGATaGCTGTCTCCCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSGPGG*LSPSPG
Trigger: CCCGGGGCTGGGAGACAGCCATCCGCCAGGCCCTGA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCAGGGCCTGGCGGATaGCTGTCTCCCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHSGPGG*LSPSPG
Trigger: CCCGGGGCTGGGAGACAGCCATCCGCCAGGCCCTGA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTCAGGGCCTGGCGGATaGCTGTCTCCCAGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGSGPGG*LSPSPG
Trigger: CCCGGGGCTGGGAGACAGCCATCCGCCAGGCCCTGA...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTGTCTGTGGGGCGCGTaGCCTGGGGCGCTGGGTGCG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGICLWGA*PGALGA
Trigger: CGCACCCAGCGCCCCAGGCCACGCGCCCCACAGACA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGCTCCAGCTGAGATGTaGCTCCAGGGGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQAPAEM*LQGLAG
Trigger: CCCGGCCAGCCCCTGGAGCCACATCTCAGCTGGAGC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCAGGTCCAGCCACGTCTaGTACTCCTGTAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGRSSHV*YSCNQG
Trigger: CCCCTGGTTACAGGAGTACCAGACGTGGCTGGACCT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAGGTCCAGCCACGTCTaGTACTCCTGTAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTRSSHV*YSCNQG
Trigger: CCCCTGGTTACAGGAGTACCAGACGTGGCTGGACCT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGAATTTTCCGGAACCTaGCGGAGGTGGGAGGGGATG +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTEFSGT*RRWEGM
Trigger: CATCCCCTCCCACCTCCGCCAGGTTCCGGAAAATTC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000600194.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCCGGCGTGGGTTTGGTaGCTGGAAGGGGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQPAWVW*LEGGAG
Trigger: CCCAGCTCCCCCTTCCAGCCACCAAACCCACGCCGG...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600194.5
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAGTTGTTGGGGATGCTaGAGGCACAGCGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTSCWGC*RHSACG
Trigger: ACCACAAGCGCTGTGCCTTCAGCATCCCCAACAACT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATGGCCAGAGACGTGGATaGCAGGCGCCGTTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHGQRRG*QAPFAG
Trigger: GCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCC...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCCGGCGGCACAAGGCTaGAGTTCTGGGCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLPAAQG*SSGRTP
Trigger: TGGAGTCCGCCCAGAACTTCAGCCTTGTGCCGCCGG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCCGGCGGCACAAGGCTaGAGTTCTGGGCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQPAAQG*SSGRTP
Trigger: TGGAGTCCGCCCAGAACTTCAGCCTTGTGCCGCCGG...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGTGCGTCCTGAAGGATaGCGGGCATCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLVRPEG*RASGPG
Trigger: GCCAGGCCCTGATGCCCGTCATCCTTCAGGACGCAC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGCGCTGGGTGCGTCCTaGAGGATGACGGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLALGAS*RMTGIR
Trigger: CCTGATGCCCGTCATCCTTCAGGACGCACCCAGCGC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCGGCGTGCCCACCACTaGGCGGCGGAACGACTTCTC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQRRAHH*AAERLL
Trigger: GAGAAGTCGTTCCGCCGCTCAGTGGTGGGCACGCCG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCGGCGTGCCCACCACTaGGCGGCGGAACGACTTCTC +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGRRAHH*AAERLL
Trigger: GAGAAGTCGTTCCGCCGCTCAGTGGTGGGCACGCCG...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGTAACCAGGGGTGGCTaGGAGATTTGTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGVTRGG*EICPRC
Trigger: ACAGCGTGGACAAATCTCTCAGCCACCCCTGGTTAC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GCTGAGATGTGGCTCCAGGGGCTGGCCGGGTACATGAAGGCGGCGTTCTGGATCCGTCACTCTCATGCGTaGTGTATCGCTCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: AEMWLQGLAGYMKAAFWIRHSHA*CIALPS
Trigger: AGATGGGAGAGCGATACATCACGCATGAGAGTGACG...GATCCAGAACGCCGCCTTCATGTACCCGGCCAGCCCCTGGAGCCACATCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGACCTCAGAGAACACTaGTGCGCTCCGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDDLREH*CAPPAP
Trigger: AGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GGGGATGCTGAAGGCACAGCGCTTGTGGTAGTTCAGCCCGCAGCCATCGCACTTATGACAGGCGCCGTTTaGGGGCCCCACTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: GDAEGTALVVVQPAAIALMTGAV*GPHYSC
Trigger: ACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCAT...AAGTGCGATGGCTGCGGGCTGAACTACCACAAGCGCTGTGCCTTCAGCATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCTTGCAGTCTTTGCATTaGAGGCCCTGCCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGLQSLH*RPCRKR
Trigger: CCTCTTCCGGCAGGGCCTGCAATGCAAAGACTGCAA...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGGATGCCGCAGGCTCTaGAGAATGGCCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTGCRRL*RMATSF
Trigger: GAATGAAGTGGCCATTCTGCAGAGCCTGCGGCATCC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGGATGCCGCAGGCTCTaGAGAATGGCCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGGCRRL*RMATSF
Trigger: GAATGAAGTGGCCATTCTGCAGAGCCTGCGGCATCC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCCAGGTAGGCCGGCGTaGCCACCACTGAGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIPGRPA*PPLSGG
Trigger: TCCGCCGCTCAGTGGTGGGCACGCCGGCCTACCTGG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGAGCAGCACCTCGGGTaGCAGGTAGGCCGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWEQHLG*QVGRRA
Trigger: GGCACGCCGGCCTACCTGGCACCCGAGGTGCTGCTC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCCACGCTGTAGCGTTTaGGCATCTTCACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGPRCSV*ASSPAA
Trigger: TGCTGCAGGTGAAGATGCGCAAACGCTACAGCGTGG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGCGTCGTCACTCTCATaGGTGATGTATCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTASSLS*VMYRSP
Trigger: GGGAGAGCGATACATCACGCATGAGAGTGACGACGC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCGCTCCGCCAGCCCCTaGATGTCGTGGTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLRSASP*MSWSCG
Trigger: ACCACAGGACCACGACATGCAGGGGCTGGCGGAGCG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TCCTCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCACGCGCTCCGCCAGCCCCTaGATGTCGTGGTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: SSSSLKGKVPLRLTYMITRSASP*MSWSCG
Trigger: ACCACAGGACCACGACATGCAGGGGCTGGCGGAGCG...CGTGATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACACTCAGGGAACTTCTaGTCCACGATGGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTHSGNF*STMEQA
Trigger: GGCCTGTTCCATCGTGGACCAGAAGTTCCCTGAGTG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCACTCAGGGAACTTCTaGTCCACGATGGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGHSGNF*STMEQA
Trigger: GGCCTGTTCCATCGTGGACCAGAAGTTCCCTGAGTG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAAGCCTGGCAAACGGTaGGCCGTGTATAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTKPGKR*AVYSCG
Trigger: TCCACAGCTATACACGGCCCACCGTTTGCCAGGCTT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGTACCCCAGGGAGCTCTaGGCCTTGCCTCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQYPREL*ALPPSP
Trigger: AGGCGAGGGAGGCAAGGCCCAGAGCTCCCTGGGGTA...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTAGCCCCCTGCCCACTTaGCCCACCCGGAGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPSPLPT*PTRSPA
Trigger: GGCGGGACTCCGGGTGGGCCAAGTGGGCAGGGGGCT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGACGGGCATCAGGGCCTaGCGGATGGCTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLTGIRA*RMAVSQ
Trigger: CTGGGAGACAGCCATCCGCCAGGCCCTGATGCCCGT...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGAGAGAAGCTTGTCTGTaGGGCGCGTGGCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLREACL*GAWPGA
Trigger: CGCCCCAGGCCACGCGCCCCACAGACAAGCTTCTCT...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGAGAGAAGCTTGTCTGTaGGGCGCGTGGCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQREACL*GAWPGA
Trigger: CGCCCCAGGCCACGCGCCCCACAGACAAGCTTCTCT...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACTTCATTCCGGAGCTaGCTCTCCTGCTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGTSFRS*LSCLVG
Trigger: CCCTACCAAGCAGGAGAGCCAGCTCCGGAATGAAGT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCGAGATCCCTGTCCGTaGGCAGCCCAGACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQRDPCP*AAQTQA
Trigger: TGCCTGGGTCTGGGCTGCCCACGGACAGGGATCTCG...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGGCCAGAGCGAGATCCCTGTCCGTaGGCAGCCCAGACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: QSNDSRVPCAEIKAMGPERDPCP*AAQTQA
Trigger: TGCCTGGGTCTGGGCTGCCCACGGACAGGGATCTCG...CTCTGGCCCCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGTGTCCCATCCAGTTTaGGCAGGAAGCCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTVSHPV*AGSHFP
Trigger: GGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACAC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGAGGGGGCGCCGGCGTaGGTTTGGTGGCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWEGAPA*VWWLEG
Trigger: CCCTTCCAGCCACCAAACCCACGCCGGCGCCCCCTC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000600194.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTTCGGTCGGGAGCCGTaGGGAAGGGGGCGTTGCCGG +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCFGREP*GRGRCR
Trigger: CCGGCAACGCCCCCTTCCTCACGGCTCCCGACCGAA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCGCGGGATCTCGTaGGCAGGTGGTGGGAGAGCG +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGIRGIS*AGGGRA
Trigger: CGCTCTCCCACCACCTGCTCACGAGATCCCGCGGAT...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGATAGGAGTGCACCGTaGGGGCGTGCGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQDRSAP*GRAGGS
Trigger: AGATCCGCCCGCACGCCCTCACGGTGCACTCCTATC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGAGCATCTCCCCGCAGTaGTCACAGAAGGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQSISPQ*SQKAGA
Trigger: GGCGCCTGCCTTCTGTGATCACTGCGGGGAGATGCT...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCGCAGCCATCGCACTTaGGGCCCTGGCGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIRSHRT*GPGALG
Trigger: GCCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGGCCAGAGACGTGGATaGCAGGCGCCGTTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIGQRRG*QAPFAG
Trigger: GCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCC...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGACACCGGAGTCCTCTaGCTCATCCATGAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDDTGVL*LIHEGA
Trigger: AGCGCCCTCATGGATGAGTCAGAGGACTCCGGTGTC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCAGGTGGCATTGGCAGTaGCGATCTCAAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGRWHWQ*RSQSSV
Trigger: CACACTGCTTTGAGATCGTCACTGCCAATGCCACCT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATGCGCTGGGTGCGTCCTaGAGGATGACGGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHALGAS*RMTGIR
Trigger: CCTGATGCCCGTCATCCTTCAGGACGCACCCAGCGC...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCACATTCTCTTGGATCTaGCTGTTGGACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: PWAAQTQAADALLQTAPSTFSWI*LLDTEM
Trigger: CATCTCTGTGTCCAACAGTCAGATCCAAGAGAATGT...GCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAACGACTTCTCGCCGATaGTGCGAGCAAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTTTSRR*CEQSQS
Trigger: ACTTTGGCTTTGCTCGCATCATCGGCGAGAAGTCGT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGGCTGGCCGGGTACATaGAGGCGGCGTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLGWPGT*RRRSGS
Trigger: AGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCGTCACTCTCATGCGTaGTGTATCGCTCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGRHSHA*CIALPS
Trigger: AGATGGGAGAGCGATACATCACGCATGAGAGTGACG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCCATGGGGCCAGAGATaGGTCCGTTTTAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGPWGQR*VRFNCW
Trigger: CCAGCAATTAAAACGGACTCATCTCTGGCCCCATGG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCACCGTGAGGGCGTaGGGGCGGATCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHCTVRA*GRIWKS
Trigger: GGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCCTCCCGCAGCGTGGTaGTGGATTTCCGCGTCGTGT +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQPPAAW*WISASC
Trigger: ACACGACGCGGAAATCCAGCACCACGCTGCGGGAGG...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGTCAATGACCTTAACTaGCACGTCCCGGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTVNDLN*HVPACL
Trigger: AAGACAGGCCGGGACGTGGCAGTTAAGGTCATTGAC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GCTGAGATGTGGCTCCAGGGGCTGGCCGGGTACATGAAGGCGGCGTTCTGGATCTCCAACATGTCCCCATaGAGCTTCTCCATCACCACA +
Preference number: 4 (lower is better)
Translates to: AEMWLQGLAGYMKAAFWISNMSP*SFSITT
Trigger: TGTGGTGATGGAGAAGCTGCATGGGGACATGTTGGA...GATCCAGAACGCCGCCTTCATGTACCCGGCCAGCCCCTGGAGCCACATCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTCCAGGTAGGCCGGCGTaGCCACCACTGAGCGGCGGA +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPPGRPA*PPLSGG
Trigger: TCCGCCGCTCAGTGGTGGGCACGCCGGCCTACCTGG...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TCCTGTGGTGGACAGGCCCCACCGAGATCCCTGTCCGTGGGCAGCCCAGACCCACCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: SCGGQAPPRSLSVGSPDPPRTVH*WDPVKN
Trigger: GTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG...TGGGTCTGGGCTGCCCACGGACAGGGATCTCGGTGGGGCCTGTCCACCACAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCTCGTGAGCAGGTGGTaGGAGAGCGGGGATCCGAGA +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLLVSRW*ESGDPR
Trigger: TCTCGGATCCCCGCTCTCCCACCACCTGCTCACGAG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGGCCCCGGGGGACCCTaGGTTCTAGATCCGCGGGAT +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWGPGGP*VLDPRD
Trigger: ATCCCGCGGATCTAGAACCCAGGGTCCCCCGGGGCC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACTTCTGGTCCACGATaGAACAGGCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGTSGPR*NRPAAS
Trigger: TGAAGCAGCTGGCCTGTTCCATCGTGGACCAGAAGT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGACCAGGTCGCCCTCCTaGATGTCTCCGGACGAGCGC +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGTRSPS*MSPDER
Trigger: GCGCTCGTCCGGAGACATCCAGGAGGGCGACCTGGT...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGGAAGTCCTCGAAGGTaGCCGAGGCCGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQGSPRR*PRPTAP
Trigger: TGGTGCTGTCGGCCTCGGCCACCTTCGAGGACTTCC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTACCCCAGGGAGCTCTaGGCCTTGCCTCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQYPREL*ALPPSP
Trigger: AGGCGAGGGAGGCAAGGCCCAGAGCTCCCTGGGGTA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCCCGCAGCGTGGTGCTaGATTTCCGCGTCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLPAAWC*ISASCV
Trigger: GACACACGACGCGGAAATCCAGCACCACGCTGCGGG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCCCGCAGCGTGGTGCTaGATTTCCGCGTCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQPAAWC*ISASCV
Trigger: GACACACGACGCGGAAATCCAGCACCACGCTGCGGG...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGATCTCAAAGCAGTGTaGGTTGGTGCCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDDLKAV*VGARRH
Trigger: GTGCCGCCGGGCACCAACCCACACTGCTTTGAGATC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCTCCAGCTGAGATGTaGCTCCAGGGGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWAPAEM*LQGLAG
Trigger: CCCGGCCAGCCCCTGGAGCCACATCTCAGCTGGAGC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGAGCCCCTGCATGTCGTaGTCCTGTGGTGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLSPCMS*SCGGQA
Trigger: GGCCTGTCCACCACAGGACCACGACATGCAGGGGCT...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGTCCGTTTTAATTGCTaGGGAAACAGGGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTVRFNC*GNREGP
Trigger: AGGCCCCTCCCTGTTTCCCCAGCAATTAAAACGGAC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGGATGGCGGGGTCCTTaGGGGTGGAGGGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIGWRGP*GWRAGV
Trigger: GACTCCTGCCCTCCACCCCCAAGGACCCCGCCATCC...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433867.5
CDS-3UTR CCA 90 bp GTTGGGGATGCTGAAGGCACAGCGCTTGTGGTAGTTCAGCCCGCAGCCATCGCAGCTTCTGGTCCACGATaGAACAGGCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: VGDAEGTALVVVQPAAIAASGPR*NRPAAS
Trigger: TGAAGCAGCTGGCCTGTTCCATCGTGGACCAGAAGC...TGCGATGGCTGCGGGCTGAACTACCACAAGCGCTGTGCCTTCAGCATCCCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGAGGGCAGGAGTCTCTaGGTCGGGGACCGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQEGRSL*VGDRVD
Trigger: ATCCACTCGGTCCCCGACTCAGAGACTCCTGCCCTC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATAGGAGTGCACCGTaGGGGCGTGCGGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWDRSAP*GRAGGS
Trigger: AGATCCGCCCGCACGCCCTCACGGTGCACTCCTATC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGAGCATCTCCCCGCAGTaGTCACAGAAGGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSISPQ*SQKAGA
Trigger: GGCGCCTGCCTTCTGTGATCACTGCGGGGAGATGCT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCGCAGCCATCGCACTTaGGGCCCTGGCGCACTAGGC +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCRSHRT*GPGALG
Trigger: GCCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGTGGCGCAGCGTTTGTaGCAGTTAAACTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTVAQRL*QLNLQS
Trigger: AGACTGCAAGTTTAACTGTCACAAACGCTGCGCCAC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGAGTGGGAGCCAGGGATaGCACCGGAGTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQSGSQG*HRSPLT
Trigger: AGTCAGAGGACTCCGGTGTCATCCCTGGCTCCCACT...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGGCCAGAGGGGCGGACTCCACCGTaGGGATTTCTGACAGCGGAA +
Preference number: 4 (lower is better)
Translates to: QSNDSRVPCAEIKAMGPEGRTPP*GFLTAE
Trigger: TTCCGCTGTCAGAAATCCTCACGGTGGAGTCCGCCC...CTCTGGCCCCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGCCGGCGGCACAAGGCTaGAGTTCTGGGCGGACTCCA +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWPAAQG*SSGRTP
Trigger: TGGAGTCCGCCCAGAACTTCAGCCTTGTGCCGCCGG...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGTGCGTCCTGAAGGATaGCGGGCATCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIVRPEG*RASGPG
Trigger: GCCAGGCCCTGATGCCCGTCATCCTTCAGGACGCAC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCGCTGGGTGCGTCCTaGAGGATGACGGGCATCAGG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWALGAS*RMTGIR
Trigger: CCTGATGCCCGTCATCCTTCAGGACGCACCCAGCGC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAGGAAATGGGTCTGCTaGTGCCAGCAACACGTTTTC +
Preference number: 4 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTRKWVC*CQQHVF
Trigger: GAAAACGTGTTGCTGGCATCAGCAGACCCATTTCCT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGGGTTGTAGCCCTGGTTaGGCAGCACCTCGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGGCSPG*AAPRVP
Trigger: TGGCACCCGAGGTGCTGCTCAACCAGGGCTACAACC...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGGGCTGGCCGGGTACATaGAGGCGGCGTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGGWPGT*RRRSGS
Trigger: AGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCC...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGGCTGGCCGGGTACATaGAGGCGGCGTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQGWPGT*RRRSGS
Trigger: AGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGTCAATGGCTCCAGCTaGGATGTGGCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLVNGSS*DVAPGA
Trigger: AGCCCCTGGAGCCACATCTCAGCTGGAGCCATTGAC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATGACCTCAGAGAACACTaGTGCGCTCCGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHDLREH*CAPPAP
Trigger: AGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTC...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGTGCACCGTGAGGGCGTaGGGGCGGATCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWCTVRA*GRIWKS
Trigger: GGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCA...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTTGCACCGTGAGGGCGTaGGGGCGGATCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFICTVRA*GRIWKS
Trigger: GGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCA...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACATGACAGGCGCCGTTTaGGGGCCCCACTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDMTGAV*GPHYSC
Trigger: ACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCAT...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGTTGCATTGCAGGCCCTaGCGGAAGAGGCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLLHCRP*RKRPLR
Trigger: CCTCAAGGGCCTCTTCCGGCAGGGCCTGCAATGCAA...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGTGTGTCGCACCGATTaGACCACCCTCATTAGGGGG +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDVCRTD*TTLIRG
Trigger: CCCCCTAATGAGGGTGGTGCAATCGGTGCGACACAC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCCTCCCGCAGCGTGGTaGTGGATTTCCGCGTCGTGT +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGPPAAW*WISASC
Trigger: ACACGACGCGGAAATCCAGCACCACGCTGCGGGAGG...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCGGAGCTGGCTCTCCTaGTTGGTAGGGAAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLRSWLS*LVGKRS
Trigger: ACTGCGCTTCCCTACCAAGCAGGAGAGCCAGCTCCG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCGCTCCGCCAGCCCCTaGATGTCGTGGTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIRSASP*MSWSCG
Trigger: ACCACAGGACCACGACATGCAGGGGCTGGCGGAGCG...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGGCCCCGGGGGACCCTaGGTTCTAGATCCGCGGGAT +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPGPGGP*VLDPRD
Trigger: ATCCCGCGGATCTAGAACCCAGGGTCCCCCGGGGCC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCACCAGGTCGCCCTCCTaGATGTCTCCGGACGAGCGC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGITRSPS*MSPDER
Trigger: GCGCTCGTCCGGAGACATCCAGGAGGGCGACCTGGT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGCGTGCGGGCGGATCTaGAAGTCCTCGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDACGRI*KSSKVA
Trigger: GGCCACCTTCGAGGACTTCCAGATCCGCCCGCACGC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCGCACTTGAGGCCCTaGCGCACTAGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHSHLRP*RTRPKS
Trigger: GCTCTTCGGCCTAGTGCGCCAGGGCCTCAAGTGCGA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACTCCTCCTCACTGGCGTaGAGCGCATTCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDSSSLA*SAFSEW
Trigger: CCACTCAGAGAATGCGCTCCACGCCAGTGAGGAGGA...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACCTTCCTCCTCCTCACTaGCGTGGAGCGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDLPPPH*RGAHSL
Trigger: CAGAGAATGCGCTCCACGCCAGTGAGGAGGAGGAAG...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGTACCCCAGGGAGCTCTaGGCCTTGCCTCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWYPREL*ALPPSP
Trigger: AGGCGAGGGAGGCAAGGCCCAGAGCTCCCTGGGGTA...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGAACCCTCCCGCAGCGTaGTGCTGGATTTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGNPPAA*CWISAS
Trigger: CGACGCGGAAATCCAGCACCACGCTGCGGGAGGGTT...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATACGGGCATCAGGGCCTaGCGGATGGCTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDTGIRA*RMAVSQ
Trigger: CTGGGAGACAGCCATCCGCCAGGCCCTGATGCCCGT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGAGATCTGGTAGACAGTaGCAATGTCCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: RGQPRPRQRMLCCKLLPARSGRQ*QCPHSL
Trigger: AAGAGAATGTGGACATTGCCACTGTCTACCAGATCT...CGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCAAAGCCACCAGGATCTaGGTGATGAGGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGKATRI*VMRNLV
Trigger: CACCAAGTTCCTCATCACCCAGATCCTGGTGGCTTT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCATGAAGGCGGCGTTCTaGATCTGGTCATTGATGTCC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGMKAAF*IWSLMS
Trigger: GGACATCAATGACCAGATCCAGAACGCCGCCTTCAT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGCTCCAGCTGAGATGTaGCTCCAGGGGCTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: WYNRVMIRECRVLRSRPWAPAEM*LQGLAG
Trigger: CCCGGCCAGCCCCTGGAGCCACATCTCAGCTGGAGC...CCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGCGAGATCCCTGTCCGTaGGCAGCCCAGACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWRDPCP*AAQTQA
Trigger: TGCCTGGGTCTGGGCTGCCCACGGACAGGGATCTCG...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGTCGTGGTCCTGTGGTaGACAGGCCCCACCGAGATC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQVVVLW*TGPTEI
Trigger: GATCTCGGTGGGGCCTGTCCACCACAGGACCACGAC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATCATGTCGTGGTCCTGTaGTGGACAGGCCCCACCGAG +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHHVVVL*WTGPTE
Trigger: CTCGGTGGGGCCTGTCCACCACAGGACCACGACATG...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGAGCCCCTGCATGTCGTaGTCCTGTGGTGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSPCMS*SCGGQA
Trigger: GGCCTGTCCACCACAGGACCACGACATGCAGGGGCT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGAGGGCAGGAGTCTCTaGGTCGGGGACCGAGTGGAT +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIEGRSL*VGDRVD
Trigger: ATCCACTCGGTCCCCGACTCAGAGACTCCTGCCCTC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGAGCCCGATCTGGATGTaGAAGGAGACCCCGGAACCC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSPIWM*KETPEP
Trigger: GGGTTCCGGGGTCTCCTTTCACATCCAGATCGGGCT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGAGCATCTCCCCGCAGTaGTCACAGAAGGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWSISPQ*SQKAGA
Trigger: GGCGCCTGCCTTCTGTGATCACTGCGGGGAGATGCT...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCGGCCAGAGACGTGGATaGCAGGCGCCGTTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKAGQRRG*QAPFAG
Trigger: GCCCGCAAACGGCGCCTGTCATCCACGTCTCTGGCC...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGCGGCCCGTATACGATaGGGCAGAAGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLAARIR*GRRGGR
Trigger: TCTTCCTCCTCTTCTGCCTCATCGTATACGGGCCGC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGCCGGAAGAGGCCCTTaGGGAGTTTCTTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQAGRGP*GVSCKP
Trigger: AGGCTTGCAAGAAACTCCTCAAGGGCCTCTTCCGGC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGCCGGAAGAGGCCCTTaGGGAGTTTCTTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLAGRGP*GVSCKP
Trigger: AGGCTTGCAAGAAACTCCTCAAGGGCCTCTTCCGGC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGGCCAGAGCCTCTGACTCATCCATaGGGGCGCTCTTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: QSNDSRVPCAEIKAMGPEPLTHP*GRSCQP
Trigger: AGGCTGACAAGAGCGCCCTCATGGATGAGTCAGAGG...CTCTGGCCCCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGACACCGGAGTCCTCTaGCTCATCCATGAGGGCGCT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQDTGVL*LIHEGA
Trigger: AGCGCCCTCATGGATGAGTCAGAGGACTCCGGTGTC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGAGTGGGAGCCAGGGATaGCACCGGAGTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGSGSQG*HRSPLT
Trigger: AGTCAGAGGACTCCGGTGTCATCCCTGGCTCCCACT...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCACTCCAAACTGCCCTaGGCCCAGCACTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQHSKLP*AQHFVR
Trigger: CCTGACGAAGTGCTGGGCTCAGGGCAGTTTGGAGTG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATCACTCCAAACTGCCCTaGGCCCAGCACTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHHSKLP*AQHFVR
Trigger: CCTGACGAAGTGCTGGGCTCAGGGCAGTTTGGAGTG...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGGTTGTAGCCCTGGTTaGGCAGCACCTCGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWGCSPG*AAPRVP
Trigger: TGGCACCCGAGGTGCTGCTCAACCAGGGCTACAACC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGGTTGTAGCCCTGGTTaGGCAGCACCTCGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDGCSPG*AAPRVP
Trigger: TGGCACCCGAGGTGCTGCTCAACCAGGGCTACAACC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGACCTCAGAGAACACTaGTGCGCTCCGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIDLREH*CAPPAP
Trigger: AGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGAGAGTGCCGTGTGCTaGGATCAAGGCCATGGGGCC +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDESAVC*DQGHGA
Trigger: GGCCCCATGGCCTTGATCTCAGCACACGGCACTCTC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR GCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTGCACCGTGAGGGCGTaGGGGCGGATCTGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCCTVRA*GRIWKS
Trigger: GGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCCTCCCGCAGCGTGGTaGTGGATTTCCGCGTCGTGT +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIPPAAW*WISASC
Trigger: ACACGACGCGGAAATCCAGCACCACGCTGCGGGAGG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CGGGTACATGAAGGCGGCGTTCTGGATCTGGTCATTGATGTCCTCATCCTCGTTAGGCAGCGGATGCTCTaGTGCAAACTGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: RVHEGGVLDLVIDVLILVRQRML*CKLLPA
Trigger: CGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCT...AACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR GCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGACCCAGGCAGCGGATaGTCTGCTGCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQDPGSG*SAANCS
Trigger: GGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGCGCTCCGCCAGCCCCTaGATGTCGTGGTCCTGTGGT +
Preference number: 4 (lower is better)
Translates to: WYNRVMIRECRVLRSRPWRSASP*MSWSCG
Trigger: ACCACAGGACCACGACATGCAGGGGCTGGCGGAGCG...CCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTCCCGAGGGCCGGAGTaGGTAGAAGGGAATCTCACG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSRGPE*VEGNLT
Trigger: CGTGAGATTCCCTTCTACCCACTCCGGCCCTCGGGA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGAGGATGGCGGGGTCCTaGGAAGGAGAGAAAGGCACT +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLRMAGS*EGEKGT
Trigger: AGTGCCTTTCTCTCCTTCCCAGGACCCCGCCATCCT...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291281.9
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGATCTCGTGAGCAGGTaGTGGGAGAGCGGGGATCCG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIDLVSR*WESGDP
Trigger: CGGATCCCCGCTCTCCCACCACCTGCTCACGAGATC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCCAGCTGCAGGAGGTTaGCCGACGTGGGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGPAAGG*PTWGHV
Trigger: AACATGACCCCACGTCGGCCAACCTCCTGCAGCTGG...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATCCAGCTGCAGGAGGTTaGCCGACGTGGGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHPAAGG*PTWGHV
Trigger: AACATGACCCCACGTCGGCCAACCTCCTGCAGCTGG...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGGAAGTCCTCGAAGGTaGCCGAGGCCGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIGSPRR*PRPTAP
Trigger: TGGTGCTGTCGGCCTCGGCCACCTTCGAGGACTTCC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGGAAGTCCTCGAAGGTaGCCGAGGCCGACAGCACCA +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDGSPRR*PRPTAP
Trigger: TGGTGCTGTCGGCCTCGGCCACCTTCGAGGACTTCC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGCGTGCGGGCGGATCTaGAAGTCCTCGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCACGRI*KSSKVA
Trigger: GGCCACCTTCGAGGACTTCCAGATCCGCCCGCACGC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCACTGGCCAGAGACGTaGATGACAGGCGCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQHWPET*MTGAVC
Trigger: GCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGCACCGAGTGGCCACTaGCCAGAGACGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQAPSGH*PETWMT
Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATGCACCGAGTGGCCACTaGCCAGAGACGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHAPSGH*PETWMT
Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGC...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACTCTTGTCCAGCTCAATaGGGCGGCCCGTATACGATG +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDSCPAQ*GGPYTM
Trigger: CATCGTATACGGGCCGCCCCATTGAGCTGGACAAGA...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGGCCAGAGAGCGCATTCTCTGAGTaGGAGCCAGGGATGACACCG +
Preference number: 4 (lower is better)
Translates to: QSNDSRVPCAEIKAMGPESAFSE*EPGMTP
Trigger: CGGTGTCATCCCTGGCTCCCACTCAGAGAATGCGCT...CTCTGGCCCCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTACCCCAGGGAGCTCTaGGCCTTGCCTCCCTCGCCT +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCYPREL*ALPPSP
Trigger: AGGCGAGGGAGGCAAGGCCCAGAGCTCCCTGGGGTA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCCGCAGCGTGGTGCTaGATTTCCGCGTCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDPAAWC*ISASCV
Trigger: GACACACGACGCGGAAATCCAGCACCACGCTGCGGG...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCCCGCAGCGTGGTGCTaGATTTCCGCGTCGTGTGTC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIPAAWC*ISASCV
Trigger: GACACACGACGCGGAAATCCAGCACCACGCTGCGGG...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCAAAGCAGTGTGGGTTaGTGCCCGGCGGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIQSSVG*CPAAQG
Trigger: GCCTTGTGCCGCCGGGCACCAACCCACACTGCTTTG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTACGGGCATCAGGGCCTaGCGGATGGCTGTCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPTGIRA*RMAVSQ
Trigger: CTGGGAGACAGCCATCCGCCAGGCCCTGATGCCCGT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTAGAGAAGCTTGTCTGTaGGGCGCGTGGCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCREACL*GAWPGA
Trigger: CGCCCCAGGCCACGCGCCCCACAGACAAGCTTCTCT...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TCCTCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCACGAGGTCCAGCCACGTCTaGTACTCCTGTAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSSSLKGKVPLRLTYMITRSSHV*YSCNQG
Trigger: CCCCTGGTTACAGGAGTACCAGACGTGGCTGGACCT...CGTGATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCGAGATCCCTGTCCGTaGGCAGCCCAGACCCAGGCA +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCRDPCP*AAQTQA
Trigger: TGCCTGGGTCTGGGCTGCCCACGGACAGGGATCTCG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGTCGTGGTCCTGTGGTaGACAGGCCCCACCGAGATC +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDVVVLW*TGPTEI
Trigger: GATCTCGGTGGGGCCTGTCCACCACAGGACCACGAC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGTCGTGGTCCTGTGGTaGACAGGCCCCACCGAGATC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIVVVLW*TGPTEI
Trigger: GATCTCGGTGGGGCCTGTCCACCACAGGACCACGAC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGCATGTCGTGGTCCTGTaGTGGACAGGCCCCACCGAG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWHVVVL*WTGPTE
Trigger: CTCGGTGGGGCCTGTCCACCACAGGACCACGACATG...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGTGTGAAGAACCGCTGTaGAGGGCAGCAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLCEEPL*RAAAGR
Trigger: TCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACA...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGTGTGAAGAACCGCTGTaGAGGGCAGCAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQCEEPL*RAAAGR
Trigger: TCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACA...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCATGAGTCGCAGAAGTTaGAGAAAAGTTCGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGMSRRS*RKVRSG
Trigger: TCCCGACCGAACTTTTCTCCAACTTCTGCGACTCAT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
3UTR CAA 72 bp GCCGGGTACATGAAGGCGGCGTTCTGGATCTGGTCATaGATGTCCTCATCCTCGTTGAAAGGGAAGGTGCCG +
Preference number: 4 (lower is better)
Translates to: AGYMKAAFWIWS*MSSSSLKGKVP
Trigger: CGGCACCTTCCCTTTCAACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGGAGGTCCCAGCGATTaGGATTCCAAGAAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLGGPSD*DSKKPE
Trigger: CTCAGGCTTCTTGGAATCTCAATCGCTGGGACCTCC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291281.9
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGAGCCCGATCTGGATGTaGAAGGAGACCCCGGAACCC +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWSPIWM*KETPEP
Trigger: GGGTTCCGGGGTCTCCTTTCACATCCAGATCGGGCT...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCAGCCCGATCTGGATGTaGAAGGAGACCCCGGAACCC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGISPIWM*KETPEP
Trigger: GGGTTCCGGGGTCTCCTTTCACATCCAGATCGGGCT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTCTTGTCAGCCTCGCTaGAATCGGTGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGSCQPR*NRWPPP
Trigger: TGGAGGAGGCCACCGATTTCAGCGAGGCTGACAAGA...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCCTCTGACTCATCCATaGGGGCGCTCTTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQPLTHP*GRSCQP
Trigger: AGGCTGACAAGAGCGCCCTCATGGATGAGTCAGAGG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTAGTGGGAGCCAGGGATaGCACCGGAGTCCTCTGACT +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFISGSQG*HRSPLT
Trigger: AGTCAGAGGACTCCGGTGTCATCCCTGGCTCCCACT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGGGCGGACTCCACCGTaGGGATTTCTGACAGCGGAA +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIGRTPP*GFLTAE
Trigger: TTCCGCTGTCAGAAATCCTCACGGTGGAGTCCGCCC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCACTCCAAACTGCCCTaGGCCCAGCACTTCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIHSKLP*AQHFVR
Trigger: CCTGACGAAGTGCTGGGCTCAGGGCAGTTTGGAGTG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GCGTCGTCACTCTCATGCGTGATGTATCGCTCTCCCATCTTCCCCTCCAGCTCTACGACTTCTCGCCGATaGTGCGAGCAAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: ASSLSCVMYRSPIFPSSSTTSRR*CEQSQS
Trigger: ACTTTGGCTTTGCTCGCATCATCGGCGAGAAGTCGT...AGAGCTGGAGGGGAAGATGGGAGAGCGATACATCACGCATGAGAGTGACGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGTTGTAGCCCTGGTTaGGCAGCACCTCGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCGCSPG*AAPRVP
Trigger: TGGCACCCGAGGTGCTGCTCAACCAGGGCTACAACC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCATGATCACGCCCACTaGCCACATGTCCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIHDHAH*PHVQRA
Trigger: CGCTCGCTGGACATGTGGTCAGTGGGCGTGATCATG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCATGATCACGCCCACTaGCCACATGTCCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIHDHAH*PHVQRA
Trigger: CGCTCGCTGGACATGTGGTCAGTGGGCGTGATCATG...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGGCTGGCCGGGTACATaGAGGCGGCGTTCTGGATCT +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPGWPGT*RRRSGS
Trigger: AGATCCAGAACGCCGCCTTCATGTACCCGGCCAGCC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGTCAATGGCTCCAGCTaGGATGTGGCTCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIVNGSS*DVAPGA
Trigger: AGCCCCTGGAGCCACATCTCAGCTGGAGCCATTGAC...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGACCTCAGAGAACACTaGTGCGCTCCGCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: WYNRVMIRECRVLRSRPWDLREH*CAPPAP
Trigger: AGGGGCTGGCGGAGCGCATCAGTGTTCTCTGAGGTC...CCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGATTGCTGGGATCCTGTaGAGAACCGCTGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQIAGIL*RTAVEG
Trigger: GCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAAT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GCCGGGTACATGAAGGCGGCGTTCTGGATCTGGTCATTGATGTCCTCATCCTCGCCATGGGGCCAGAGATaGGTCCGTTTTAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: AGYMKAAFWIWSLMSSSSPWGQR*VRFNCW
Trigger: CCAGCAATTAAAACGGACTCATCTCTGGCCCCATGG...CGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACCCATGGGGCCAGAGATaGGTCCGTTTTAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDPWGQR*VRFNCW
Trigger: CCAGCAATTAAAACGGACTCATCTCTGGCCCCATGG...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGTTGCAGTCTTTGCATTaGAGGCCCTGCCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQLQSLH*RPCRKR
Trigger: CCTCTTCCGGCAGGGCCTGCAATGCAAAGACTGCAA...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTCCTCCCGCAGCGTGGTaGTGGATTTCCGCGTCGTGT +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPPPAAW*WISASC
Trigger: ACACGACGCGGAAATCCAGCACCACGCTGCGGGAGG...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCTGTTGGACACAGAGATaGTCAGAGAAGCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGCWTQR*SEKLVC
Trigger: ACAGACAAGCTTCTCTGAGCATCTCTGTGTCCAACA...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGCGGAGCTGGCTCTCCTaGTTGGTAGGGAAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWRSWLS*LVGKRS
Trigger: ACTGCGCTTCCCTACCAAGCAGGAGAGCCAGCTCCG...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCGGAGCTGGCTCTCCTaGTTGGTAGGGAAGCGCAGT +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIRSWLS*LVGKRS
Trigger: ACTGCGCTTCCCTACCAAGCAGGAGAGCCAGCTCCG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTTCACGATCCCGGGATaGCGCAGGCTCTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGFTIPG*RRLCRM
Trigger: CATTCTGCAGAGCCTGCGGCATCCCGGGATCGTGAA...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTGCTCTGCTGCAAACTaGTCCCAGCGCGCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGICSAAN*SQRASS
Trigger: TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGACCCAGGCAGCGGATaGTCTGCTGCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDDPGSG*SAANCS
Trigger: GGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGACCCAGGCAGCGGATaGTCTGCTGCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIDPGSG*SAANCS
Trigger: GGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGPRTVH*WDPVKN
Trigger: GTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTCCCGAGGGCCGGAGTaGGTAGAAGGGAATCTCACG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGISRGPE*VEGNLT
Trigger: CGTGAGATTCCCTTCTACCCACTCCGGCCCTCGGGA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGAGTCGGGGACCGAGTaGATTCCAGAGATAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLESGTE*IPEIKG
Trigger: CCCCTTTATCTCTGGAATCCACTCGGTCCCCGACTC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTCGGGGGAATTCACCTTaGGGGTGGAGGGCAGGAGTC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPRGNSP*GWRAGV
Trigger: GACTCCTGCCCTCCACCCCCAAGGTGAATTCCCCCG...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000291281.9
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGATCTCGTGAGCAGGTaGTGGGAGAGCGGGGATCCG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPDLVSR*WESGDP
Trigger: CGGATCCCCGCTCTCCCACCACCTGCTCACGAGATC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACACTTCTGGTCCACGATaGAACAGGCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDTSGPR*NRPAAS
Trigger: TGAAGCAGCTGGCCTGTTCCATCGTGGACCAGAAGT...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCCAGCTGCAGGAGGTTaGCCGACGTGGGGTCATGTT +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIPAAGG*PTWGHV
Trigger: AACATGACCCCACGTCGGCCAACCTCCTGCAGCTGG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGCGTGCGGGCGGATCTaGAAGTCCTCGAAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: LVQQSNDSRVPCAEIKAMACGRI*KSSKVA
Trigger: GGCCACCTTCGAGGACTTCCAGATCCGCCCGCACGC...CATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTTCGCACTTGAGGCCCTaGCGCACTAGGCCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPSHLRP*RTRPKS
Trigger: GCTCTTCGGCCTAGTGCGCCAGGGCCTCAAGTGCGA...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCACTGGCCAGAGACGTaGATGACAGGCGCCGTTTGC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIHWPET*MTGAVC
Trigger: GCAAACGGCGCCTGTCATCCACGTCTCTGGCCAGTG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGCACCGAGTGGCCACTaGCCAGAGACGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIAPSGH*PETWMT
Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACAGTTTCTTGCAAGCCTaGCAAACGGTGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDSFLQA*QTVGRV
Trigger: TACACGGCCCACCGTTTGCCAGGCTTGCAAGAAACT...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCCTCCTCACTGGCGTaGAGCGCATTCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHSSSLA*SAFSEW
Trigger: CCACTCAGAGAATGCGCTCCACGCCAGTGAGGAGGA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCTTCCTCCTCCTCACTaGCGTGGAGCGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQLPPPH*RGAHSL
Trigger: CAGAGAATGCGCTCCACGCCAGTGAGGAGGAGGAAG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTAACCCTCCCGCAGCGTaGTGCTGGATTTCCGCGTCG +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCNPPAA*CWISAS
Trigger: CGACGCGGAAATCCAGCACCACGCTGCGGGAGGGTT...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCTTGGTCGTGTTGTTCTaGAAGAGCGTGATACACTTG +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGLVVLF*KSVIHL
Trigger: CAAGTGTATCACGCTCTTCCAGAACAACACGACCAA...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGACAAGGCTGAAGTTCTaGGCGGACTCCACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQTRLKF*ADSTVR
Trigger: CCTCACGGTGGAGTCCGCCCAGAACTTCAGCCTTGT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCAAAGCAGTGTGGGTTaGTGCCCGGCGGCACAAGGC +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCQSSVG*CPAAQG
Trigger: GCCTTGTGCCGCCGGGCACCAACCCACACTGCTTTG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGACTTCATTCCGGAGCTaGCTCTCCTGCTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQTSFRS*LSCLVG
Trigger: CCCTACCAAGCAGGAGAGCCAGCTCCGGAATGAAGT...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGCCGGCCCTTCTCACTaGACAGGATCATCTCCAACA +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLAGPSH*TGSSPT
Trigger: TGTTGGAGATGATCCTGTCCAGTGAGAAGGGCCGGC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGCCGGCCCTTCTCACTaGACAGGATCATCTCCAACA +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQAGPSH*TGSSPT
Trigger: TGTTGGAGATGATCCTGTCCAGTGAGAAGGGCCGGC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCAGCAACACGTTTTCTaGTTTCAAGTCACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGQQHVF*FQVTVD
Trigger: GTCCACTGTGACTTGAAACCAGAAAACGTGTTGCTG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCACGCCCGCGGCGTTCTGGATCTaGTCATTGATGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SSSLKGKVPLRLTYMITPAAFWI*SLMSSS
Trigger: GGATGAGGACATCAATGACCAGATCCAGAACGCCGC...GGGCGTGATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCATGTCGTGGTCCTGTaGTGGACAGGCCCCACCGAG +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCHVVVL*WTGPTE
Trigger: CTCGGTGGGGCCTGTCCACCACAGGACCACGACATG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTAGCCCCTGCATGTCGTaGTCCTGTGGTGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPSPCMS*SCGGQA
Trigger: GGCCTGTCCACCACAGGACCACGACATGCAGGGGCT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTAGCCCCTGCATGTCGTaGTCCTGTGGTGGACAGGCC +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCSPCMS*SCGGQA
Trigger: GGCCTGTCCACCACAGGACCACGACATGCAGGGGCT...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTGTGAAGAACCGCTGTaGAGGGCAGCAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGCEEPL*RAAAGR
Trigger: TCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACA...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGTGTCCCATCCAGTTTaGGCAGGAAGCCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQVSHPV*AGSHFP
Trigger: GGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACAC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGTGTCCCATCCAGTTTaGGCAGGAAGCCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLVSHPV*AGSHFP
Trigger: GGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACAC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCACGCCCGTCCGTTTTAATTGCTaGGGAAACAGGGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SSSLKGKVPLRLTYMITPVRFNC*GNREGP
Trigger: AGGCCCCTCCCTGTTTCCCCAGCAATTAAAACGGAC...GGGCGTGATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGGGAACCTGGCGGAGGTaGGAGGGGATGCTGAATGAA +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGGTWRR*EGMLNE
Trigger: TTCATTCAGCATCCCCTCCCACCTCCGCCAGGTTCC...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000600194.5
CDS-3UTR TCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCAAGCATCTCCCCGCAGTaGTCACAGAAGGCAGGCGCC +
Preference number: 4 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPSISPQ*SQKAGA
Trigger: GGCGCCTGCCTTCTGTGATCACTGCGGGGAGATGCT...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGAGTTGTTGGGGATGCTaGAGGCACAGCGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGSCWGC*RHSACG
Trigger: ACCACAAGCGCTGTGCCTTCAGCATCCCCAACAACT...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGCCGGAAGAGGCCCTTaGGGAGTTTCTTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDAGRGP*GVSCKP
Trigger: AGGCTTGCAAGAAACTCCTCAAGGGCCTCTTCCGGC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCCGGAAGAGGCCCTTaGGGAGTTTCTTGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIAGRGP*GVSCKP
Trigger: AGGCTTGCAAGAAACTCCTCAAGGGCCTCTTCCGGC...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCCTCTGACTCATCCATaGGGGCGCTCTTGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIPLTHP*GRSCQP
Trigger: AGGCTGACAAGAGCGCCCTCATGGATGAGTCAGAGG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGGAGCGCATTCTCTaGGTGGGAGCCAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPVERIL*VGARDD
Trigger: GTCATCCCTGGCTCCCACTCAGAGAATGCGCTCCAC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGTGGAGCGCATTCTCTaGGTGGGAGCCAGGGATGAC +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCVERIL*VGARDD
Trigger: GTCATCCCTGGCTCCCACTCAGAGAATGCGCTCCAC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGTGTTCTGGAAGAGCGTaGTACACTTGCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLCSGRA*YTCSPG
Trigger: GCCTGGACTGCAAGTGTATCACGCTCTTCCAGAACA...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGGCGGACTCCACCGTaGGGATTTCTGACAGCGGAA +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCGRTPP*GFLTAE
Trigger: TTCCGCTGTCAGAAATCCTCACGGTGGAGTCCGCCC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACAGGAAATGGGTCTGCTaGTGCCAGCAACACGTTTTC +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDRKWVC*CQQHVF
Trigger: GAAAACGTGTTGCTGGCATCAGCAGACCCATTTCCT...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGCATGATCACGCCCACTaGCCACATGTCCAGCGAGCG +
Preference number: 4 (lower is better)
Translates to: WYNRVMIRECRVLRSRPWHDHAH*PHVQRA
Trigger: CGCTCGCTGGACATGTGGTCAGTGGGCGTGATCATG...CCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGTAACCAGGGGTGGCTaGGAGATTTGTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQVTRGG*EICPRC
Trigger: ACAGCGTGGACAAATCTCTCAGCCACCCCTGGTTAC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTATTGCTGGGATCCTGTaGAGAACCGCTGTGGAGGGC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIIAGIL*RTAVEG
Trigger: GCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAAT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCCATGGGGCCAGAGATaGGTCCGTTTTAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLPWGQR*VRFNCW
Trigger: CCAGCAATTAAAACGGACTCATCTCTGGCCCCATGG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATATGACAGGCGCCGTTTaGGGGCCCCACTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDMTGAV*GPHYSC
Trigger: ACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCAT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGTGTGTCGCACCGATTaGACCACCCTCATTAGGGGG +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIVCRTD*TTLIRG
Trigger: CCCCCTAATGAGGGTGGTGCAATCGGTGCGACACAC...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTGTGTCGCACCGATTaGACCACCCTCATTAGGGGG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWVCRTD*TTLIRG
Trigger: CCCCCTAATGAGGGTGGTGCAATCGGTGCGACACAC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGTCAATGACCTTAACTaGCACGTCCCGGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQVNDLN*HVPACL
Trigger: AAGACAGGCCGGGACGTGGCAGTTAAGGTCATTGAC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATTTCACGATCCCGGGATaGCGCAGGCTCTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDFTIPG*RRLCRM
Trigger: CATTCTGCAGAGCCTGCGGCATCCCGGGATCGTGAA...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTTCACGATCCCGGGATaGCGCAGGCTCTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIFTIPG*RRLCRM
Trigger: CATTCTGCAGAGCCTGCGGCATCCCGGGATCGTGAA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGTTCACGATCCCGGGATaGCGCAGGCTCTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWFTIPG*RRLCRM
Trigger: CATTCTGCAGAGCCTGCGGCATCCCGGGATCGTGAA...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACTCCAACATGTCCCCATaGAGCTTCTCCATCACCACA +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDSNMSP*SFSITT
Trigger: TGTGGTGATGGAGAAGCTGCATGGGGACATGTTGGA...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCCACGCTGTAGCGTTTaGGCATCTTCACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGPRCSV*ASSPAA
Trigger: TGCTGCAGGTGAAGATGCGCAAACGCTACAGCGTGG...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGCGTCGTCACTCTCATaGGTGATGTATCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQASSLS*VMYRSP
Trigger: GGGAGAGCGATACATCACGCATGAGAGTGACGACGC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGGCGTCGTCACTCTCATaGGTGATGTATCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGASSLS*VMYRSP
Trigger: GGGAGAGCGATACATCACGCATGAGAGTGACGACGC...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATGCGTCGTCACTCTCATaGGTGATGTATCGCTCTCCC +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHASSLS*VMYRSP
Trigger: GGGAGAGCGATACATCACGCATGAGAGTGACGACGC...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTTGCTCTGCTGCAAACTaGTCCCAGCGCGCGTCGTCA +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPCSAAN*SQRASS
Trigger: TGACGACGCGCGCTGGGAGCAGTTTGCAGCAGAGCA...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTAGGCAGCGGATGCTCTaGTGCAAACTGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPRQRML*CKLLPA
Trigger: CGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGACCCAGGCAGCGGATaGTCTGCTGCAAACTGCTCC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPDPGSG*SAANCS
Trigger: GGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTCTTGTCCAGCTCAATaGGGCGGCCCGTATACGATG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSCPAQ*GGPYTM
Trigger: CATCGTATACGGGCCGCCCCATTGAGCTGGACAAGA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTAGCGCATTCTCTGAGTaGGAGCCAGGGATGACACCG +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFISAFSE*EPGMTP
Trigger: CGGTGTCATCCCTGGCTCCCACTCAGAGAATGCGCT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCAGCGCATTCTCTGAGTaGGAGCCAGGGATGACACCG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGISAFSE*EPGMTP
Trigger: CGGTGTCATCCCTGGCTCCCACTCAGAGAATGCGCT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATACAAGGCTGAAGTTCTaGGCGGACTCCACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDTRLKF*ADSTVR
Trigger: CCTCACGGTGGAGTCCGCCCAGAACTTCAGCCTTGT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATACTTCATTCCGGAGCTaGCTCTCCTGCTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHTSFRS*LSCLVG
Trigger: CCCTACCAAGCAGGAGAGCCAGCTCCGGAATGAAGT...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGCCGGCCCTTCTCACTaGACAGGATCATCTCCAACA +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQAGPSH*TGSSPT
Trigger: TGTTGGAGATGATCCTGTCCAGTGAGAAGGGCCGGC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGCGGCGTTCTGGATCTaGTCATTGATGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQAAFWI*SLMSSS
Trigger: GGATGAGGACATCAATGACCAGATCCAGAACGCCGC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGAGGTCCAGCCACGTCTaGTACTCCTGTAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWRSSHV*YSCNQG
Trigger: CCCCTGGTTACAGGAGTACCAGACGTGGCTGGACCT...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTAGGTCCAGCCACGTCTaGTACTCCTGTAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIRSSHV*YSCNQG
Trigger: CCCCTGGTTACAGGAGTACCAGACGTGGCTGGACCT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGCATGTCGTGGTCCTGTaGTGGACAGGCCCCACCGAG +
Preference number: 4 (lower is better)
Translates to: LVQQSNDSRVPCAEIKAMHVVVL*WTGPTE
Trigger: CTCGGTGGGGCCTGTCCACCACAGGACCACGACATG...CATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp ATGTCCTCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCGTGTCCCATCCAGTTTaGGCAGGAAGCCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: MSSSSLKGKVPLRLTYMIVSHPV*AGSHFP
Trigger: GGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACAC...GATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATGTGTCCCATCCAGTTTaGGCAGGAAGCCACTTTCCC +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHVSHPV*AGSHFP
Trigger: GGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACAC...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGTCCGTTTTAATTGCTaGGGAAACAGGGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQVRFNC*GNREGP
Trigger: AGGCCCCTCCCTGTTTCCCCAGCAATTAAAACGGAC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGGCTCCGGGAGCGTaGACACCTCGAATTTTCCGG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPVAPGA*TPRIFR
Trigger: CCGGAAAATTCGAGGTGTCCACGCTCCCGGAGCCAC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600194.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGGCGGGAGAGGGATGTaGCGACGGAAAAGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPGGRGM*RRKSSE
Trigger: CTCTGAGCTTTTCCGTCGCCACATCCCTCTCCCGCC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000600194.5
3UTR CAA 72 bp GCGTTCTGGATCTGGTCATTGATGTCCTCATCCTCGTaGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATG +
Preference number: 4 (lower is better)
Translates to: AFWIWSLMSSSS*KGKVPLRLTYM
Trigger: CATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGACATCAATGACCAGATCCAGAACGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR TCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATAGTTGTTGGGGATGCTaGAGGCACAGCGCTTGTGGT +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDSCWGC*RHSACG
Trigger: ACCACAAGCGCTGTGCCTTCAGCATCCCCAACAACT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGCGGCCCGTATACGATaGGGCAGAAGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPAARIR*GRRGGR
Trigger: TCTTCCTCCTCTTCTGCCTCATCGTATACGGGCCGC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGCGGCCCGTATACGATaGGGCAGAAGAGGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCAARIR*GRRGGR
Trigger: TCTTCCTCCTCTTCTGCCTCATCGTATACGGGCCGC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGTGGCGCAGCGTTTGTaGCAGTTAAACTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLVAQRL*QLNLQS
Trigger: AGACTGCAAGTTTAACTGTCACAAACGCTGCGCCAC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTCTTGTCAGCCTCGCTaGAATCGGTGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCSCQPR*NRWPPP
Trigger: TGGAGGAGGCCACCGATTTCAGCGAGGCTGACAAGA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGTCACACAGCTTCACCTaGGGAAATGGGTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLSHSFT*GNGSAD
Trigger: ATCAGCAGACCCATTTCCTCAGGTGAAGCTGTGTGA...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATACGACTTCTCGCCGATaGTGCGAGCAAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHTTSRR*CEQSQS
Trigger: ACTTTGGCTTTGCTCGCATCATCGGCGAGAAGTCGT...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTAACCAGGGGTGGCTaGGAGATTTGTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWVTRGG*EICPRC
Trigger: ACAGCGTGGACAAATCTCTCAGCCACCCCTGGTTAC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGTAACCAGGGGTGGCTaGGAGATTTGTCCACGCTGT +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIVTRGG*EICPRC
Trigger: ACAGCGTGGACAAATCTCTCAGCCACCCCTGGTTAC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCGTCACTCTCATGCGTaGTGTATCGCTCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQRHSHA*CIALPS
Trigger: AGATGGGAGAGCGATACATCACGCATGAGAGTGACG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTATGACAGGCGCCGTTTaGGGGCCCCACTACAGTTGT +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPMTGAV*GPHYSC
Trigger: ACAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCAT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTTGCAGTCTTTGCATTaGAGGCCCTGCCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGILQSLH*RPCRKR
Trigger: CCTCTTCCGGCAGGGCCTGCAATGCAAAGACTGCAA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGTGTCGCACCGATTaGACCACCCTCATTAGGGGG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPVCRTD*TTLIRG
Trigger: CCCCCTAATGAGGGTGGTGCAATCGGTGCGACACAC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGGATGCCGCAGGCTCTaGAGAATGGCCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWGCRRL*RMATSF
Trigger: GAATGAAGTGGCCATTCTGCAGAGCCTGCGGCATCC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGGATGCCGCAGGCTCTaGAGAATGGCCACTTCATTC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIGCRRL*RMATSF
Trigger: GAATGAAGTGGCCATTCTGCAGAGCCTGCGGCATCC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTTTCACGATCCCGGGATaGCGCAGGCTCTGCAGAATG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPFTIPG*RRLCRM
Trigger: CATTCTGCAGAGCCTGCGGCATCCCGGGATCGTGAA...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCAGGCGTCTCGAACATaGACTCCAGGTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDQASRT*TPGSRS
Trigger: GGATCGTGAACCTGGAGTGCATGTTCGAGACGCCTG...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCAGGCGTCTCGAACATaGACTCCAGGTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIQASRT*TPGSRS
Trigger: GGATCGTGAACCTGGAGTGCATGTTCGAGACGCCTG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGTTGCGCATCTTCACCTaGAGCAGGTTGTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQLRIFT*SRLLMR
Trigger: CCTCATCAACAACCTGCTGCAGGTGAAGATGCGCAA...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCACGCTGTAGCGTTTaGGCATCTTCACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDPRCSV*ASSPAA
Trigger: TGCTGCAGGTGAAGATGCGCAAACGCTACAGCGTGG...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCCACGCTGTAGCGTTTaGGCATCTTCACCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIPRCSV*ASSPAA
Trigger: TGCTGCAGGTGAAGATGCGCAAACGCTACAGCGTGG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCAAGGCAGCGGATGCTCTaGTGCAAACTGCTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPRQRML*CKLLPA
Trigger: CGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCT...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCACTCAGGGAACTTCTaGTCCACGATGGAACAGGCC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIHSGNF*STMEQA
Trigger: GGCCTGTTCCATCGTGGACCAGAAGTTCCCTGAGTG...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGTCTTGTCCAGCTCAATaGGGCGGCCCGTATACGATG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWSCPAQ*GGPYTM
Trigger: CATCGTATACGGGCCGCCCCATTGAGCTGGACAAGA...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATAAGCCTGGCAAACGGTaGGCCGTGTATAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDKPGKR*AVYSCG
Trigger: TCCACAGCTATACACGGCCCACCGTTTGCCAGGCTT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGAGTTTCTTGCAAGCCTaGCAAACGGTGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSFLQA*QTVGRV
Trigger: TACACGGCCCACCGTTTGCCAGGCTTGCAAGAAACT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTCCTCCTCACTGGCGTaGAGCGCATTCTCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCSSSLA*SAFSEW
Trigger: CCACTCAGAGAATGCGCTCCACGCCAGTGAGGAGGA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTCTTCCTCCTCCTCACTaGCGTGGAGCGCATTCTCTG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPLPPPH*RGAHSL
Trigger: CAGAGAATGCGCTCCACGCCAGTGAGGAGGAGGAAG...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCCTTATAGTATCTGTTaGTCGTGTTGTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGPYSIC*SCCSGR
Trigger: TCTTCCAGAACAACACGACCAACAGATACTATAAGG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGATCTCAAAGCAGTGTaGGTTGGTGCCCGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: LVQQSNDSRVPCAEIKAMDLKAV*VGARRH
Trigger: GTGCCGCCGGGCACCAACCCACACTGCTTTGAGATC...CATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp GCCGGGTACATGAAGGCGGCGTTCTGGATCTGGTCATTGATGTCCTCATCCTCGCTTGGATCTGACTGTTaGACACAGAGATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: AGYMKAAFWIWSLMSSSSLGSDC*TQRCSE
Trigger: CTCTGAGCATCTCTGTGTCCAACAGTCAGATCCAAG...CGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTACTTCATTCCGGAGCTaGCTCTCCTGCTTGGTAGGG +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFITSFRS*LSCLVG
Trigger: CCCTACCAAGCAGGAGAGCCAGCTCCGGAATGAAGT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCAGGCTCTGCAGAATaGCCACTTCATTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWAGSAE*PLHSGA
Trigger: AGCTCCGGAATGAAGTGGCCATTCTGCAGAGCCTGC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCGCAGGCTCTGCAGAATaGCCACTTCATTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIAGSAE*PLHSGA
Trigger: AGCTCCGGAATGAAGTGGCCATTCTGCAGAGCCTGC...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGAAAGCCACCAGGATCTaGGTGATGAGGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLKATRI*VMRNLV
Trigger: CACCAAGTTCCTCATCACCCAGATCCTGGTGGCTTT...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGGCGGCGTTCTGGATCTaGTCATTGATGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQAAFWI*SLMSSS
Trigger: GGATGAGGACATCAATGACCAGATCCAGAACGCCGC...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGATGAAGGCGGCGTTCTaGATCTGGTCATTGATGTCC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLMKAAF*IWSLMS
Trigger: GGACATCAATGACCAGATCCAGAACGCCGCCTTCAT...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTTGTGAAGAACCGCTGTaGAGGGCAGCAGCTGGACGA +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPCEEPL*RAAAGR
Trigger: TCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACA...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGACGTGGGGTCATGTTTaGAAAGCAGGATCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQTWGHV*KAGSCR
Trigger: ACGACAAGATCCTGCTTTTCAAACATGACCCCACGT...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATCTTGTCAGCCTCGCTaGAATCGGTGGCCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPSCQPR*NRWPPP
Trigger: TGGAGGAGGCCACCGATTTCAGCGAGGCTGACAAGA...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATTGTTCTGGAAGAGCGTaGTACACTTGCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDCSGRA*YTCSPG
Trigger: GCCTGGACTGCAAGTGTATCACGCTCTTCCAGAACA...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCAGGTGGCATTGGCAGTaGCGATCTCAAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIRWHWQ*RSQSSV
Trigger: CACACTGCTTTGAGATCGTCACTGCCAATGCCACCT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACACATTCTCTTGGATCTaGCTGTTGGACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDTFSWI*LLDTEM
Trigger: CATCTCTGTGTCCAACAGTCAGATCCAAGAGAATGT...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGAGGAAATGGGTCTGCTaGTGCCAGCAACACGTTTTC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQRKWVC*CQQHVF
Trigger: GAAAACGTGTTGCTGGCATCAGCAGACCCATTTCCT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTCACACAGCTTCACCTaGGGAAATGGGTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSHSFT*GNGSAD
Trigger: ATCAGCAGACCCATTTCCTCAGGTGAAGCTGTGTGA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGACGACTTCTCGCCGATaGTGCGAGCAAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWTTSRR*CEQSQS
Trigger: ACTTTGGCTTTGCTCGCATCATCGGCGAGAAGTCGT...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCGTCACTCTCATGCGTaGTGTATCGCTCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIRHSHA*CIALPS
Trigger: AGATGGGAGAGCGATACATCACGCATGAGAGTGACG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACTGTTGGACACAGAGATaGTCAGAGAAGCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDCWTQR*SEKLVC
Trigger: ACAGACAAGCTTCTCTGAGCATCTCTGTGTCCAACA...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGTCAATGACCTTAACTaGCACGTCCCGGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDVNDLN*HVPACL
Trigger: AAGACAGGCCGGGACGTGGCAGTTAAGGTCATTGAC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTCAGGCGTCTCGAACATaGACTCCAGGTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPQASRT*TPGSRS
Trigger: GGATCGTGAACCTGGAGTGCATGTTCGAGACGCCTG...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCAGGCGTCTCGAACATaGACTCCAGGTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCQASRT*TPGSRS
Trigger: GGATCGTGAACCTGGAGTGCATGTTCGAGACGCCTG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTCCAACATGTCCCCATaGAGCTTCTCCATCACCACA +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSNMSP*SFSITT
Trigger: TGTGGTGATGGAGAAGCTGCATGGGGACATGTTGGA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTTGCGCATCTTCACCTaGAGCAGGTTGTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQLRIFT*SRLLMR
Trigger: CCTCATCAACAACCTGCTGCAGGTGAAGATGCGCAA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTTGCGCATCTTCACCTaGAGCAGGTTGTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHLRIFT*SRLLMR
Trigger: CCTCATCAACAACCTGCTGCAGGTGAAGATGCGCAA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATACGAGTCGCAGAAGTTaGAGAAAAGTTCGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHTSRRS*RKVRSG
Trigger: TCCCGACCGAACTTTTCTCCAACTTCTGCGACTCGT...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTAAGCCTGGCAAACGGTaGGCCGTGTATAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPKPGKR*AVYSCG
Trigger: TCCACAGCTATACACGGCCCACCGTTTGCCAGGCTT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATAGTTTCTTGCAAGCCTaGCAAACGGTGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDSFLQA*QTVGRV
Trigger: TACACGGCCCACCGTTTGCCAGGCTTGCAAGAAACT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCACAAGGCTGAAGTTCTaGGCGGACTCCACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKATRLKF*ADSTVR
Trigger: CCTCACGGTGGAGTCCGCCCAGAACTTCAGCCTTGT...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCTTGGATCTGACTGTTaGACACAGAGATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLLGSDC*TQRCSE
Trigger: CTCTGAGCATCTCTGTGTCCAACAGTCAGATCCAAG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGCAGGCTCTGCAGAATaGCCACTTCATTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPAGSAE*PLHSGA
Trigger: AGCTCCGGAATGAAGTGGCCATTCTGCAGAGCCTGC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCGGCGTTCTGGATCTaGTCATTGATGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWAAFWI*SLMSSS
Trigger: GGATGAGGACATCAATGACCAGATCCAGAACGCCGC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGCGGCGTTCTGGATCTaGTCATTGATGTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDAAFWI*SLMSSS
Trigger: GGATGAGGACATCAATGACCAGATCCAGAACGCCGC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CGGGTACATGAAGGCGGCGTTCTGGATCTGGTCATTGATGTCCTCATCCTCGTTATGAAGGCGGCGTTCTaGATCTGGTCATTGATGTCC +
Preference number: 4 (lower is better)
Translates to: RVHEGGVLDLVIDVLILVMKAAF*IWSLMS
Trigger: GGACATCAATGACCAGATCCAGAACGCCGCCTTCAT...AACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGTCCGTTTTAATTGCTaGGGAAACAGGGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDVRFNC*GNREGP
Trigger: AGGCCCCTCCCTGTTTCCCCAGCAATTAAAACGGAC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGTGGCGCAGCGTTTGTaGCAGTTAAACTTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDVAQRL*QLNLQS
Trigger: AGACTGCAAGTTTAACTGTCACAAACGCTGCGCCAC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTTGTTCTGGAAGAGCGTaGTACACTTGCAGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPCSGRA*YTCSPG
Trigger: GCCTGGACTGCAAGTGTATCACGCTCTTCCAGAACA...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGGCCAGAGCACCGTGAGGATTTCTaGCAGCGGAATTTCCTTATA +
Preference number: 4 (lower is better)
Translates to: QSNDSRVPCAEIKAMGPEHREDF*QRNFLI
Trigger: TATAAGGAAATTCCGCTGTCAGAAATCCTCACGGTG...CTCTGGCCCCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTAGGTGGCATTGGCAGTaGCGATCTCAAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPRWHWQ*RSQSSV
Trigger: CACACTGCTTTGAGATCGTCACTGCCAATGCCACCT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCAGGAAATGGGTCTGCTaGTGCCAGCAACACGTTTTC +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIRKWVC*CQQHVF
Trigger: GAAAACGTGTTGCTGGCATCAGCAGACCCATTTCCT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTAGGAAATGGGTCTGCTaGTGCCAGCAACACGTTTTC +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIRKWVC*CQQHVF
Trigger: GAAAACGTGTTGCTGGCATCAGCAGACCCATTTCCT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGTCACACAGCTTCACCTaGGGAAATGGGTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWSHSFT*GNGSAD
Trigger: ATCAGCAGACCCATTTCCTCAGGTGAAGCTGTGTGA...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTACGACTTCTCGCCGATaGTGCGAGCAAAGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPTTSRR*CEQSQS
Trigger: ACTTTGGCTTTGCTCGCATCATCGGCGAGAAGTCGT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCGTCACTCTCATGCGTaGTGTATCGCTCTCCCATCT +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCRHSHA*CIALPS
Trigger: AGATGGGAGAGCGATACATCACGCATGAGAGTGACG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCCATGGGGCCAGAGATaGGTCCGTTTTAATTGCTGG +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCPWGQR*VRFNCW
Trigger: CCAGCAATTAAAACGGACTCATCTCTGGCCCCATGG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATTGCAGTCTTTGCATTaGAGGCCCTGCCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPLQSLH*RPCRKR
Trigger: CCTCTTCCGGCAGGGCCTGCAATGCAAAGACTGCAA...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR GCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGTCAATGACCTTAACTaGCACGTCCCGGCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCVNDLN*HVPACL
Trigger: AAGACAGGCCGGGACGTGGCAGTTAAGGTCATTGAC...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCCAGGCGTCTCGAACATaGACTCCAGGTTCACGATCC +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKAQASRT*TPGSRS
Trigger: GGATCGTGAACCTGGAGTGCATGTTCGAGACGCCTG...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR GCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTCCAACATGTCCCCATaGAGCTTCTCCATCACCACA +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGISNMSP*SFSITT
Trigger: TGTGGTGATGGAGAAGCTGCATGGGGACATGTTGGA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATTCCAACATGTCCCCATaGAGCTTCTCCATCACCACA +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDSNMSP*SFSITT
Trigger: TGTGGTGATGGAGAAGCTGCATGGGGACATGTTGGA...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQPRTVH*WDPVKN
Trigger: GTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGACGAGTCGCAGAAGTTaGAGAAAAGTTCGGTCGGGA +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWTSRRS*RKVRSG
Trigger: TCCCGACCGAACTTTTCTCCAACTTCTGCGACTCGT...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGAGAAAAGTAGTGGGTTaGAGGTCCCAGCGATTGAGA +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGRKVVG*RSQRLR
Trigger: TCTCAATCGCTGGGACCTCCAACCCACTACTTTTCT...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291281.9
CDS-3UTR CCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCAAAGCCTGGCAAACGGTaGGCCGTGTATAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPKPGKR*AVYSCG
Trigger: TCCACAGCTATACACGGCCCACCGTTTGCCAGGCTT...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTAGTTTCTTGCAAGCCTaGCAAACGGTGGGCCGTGTA +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCSFLQA*QTVGRV
Trigger: TACACGGCCCACCGTTTGCCAGGCTTGCAAGAAACT...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCTTGGATCTGACTGTTaGACACAGAGATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQLGSDC*TQRCSE
Trigger: CTCTGAGCATCTCTGTGTCCAACAGTCAGATCCAAG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGCAGGCTCTGCAGAATaGCCACTTCATTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: LVQQSNDSRVPCAEIKAMAGSAE*PLHSGA
Trigger: AGCTCCGGAATGAAGTGGCCATTCTGCAGAGCCTGC...CATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCAGCCGGCCCTTCTCACTaGACAGGATCATCTCCAACA +
Preference number: 4 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPAGPSH*TGSSPT
Trigger: TGTTGGAGATGATCCTGTCCAGTGAGAAGGGCCGGC...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATAAAGCCACCAGGATCTaGGTGATGAGGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDKATRI*VMRNLV
Trigger: CACCAAGTTCCTCATCACCCAGATCCTGGTGGCTTT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGAAAGCCACCAGGATCTaGGTGATGAGGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWKATRI*VMRNLV
Trigger: CACCAAGTTCCTCATCACCCAGATCCTGGTGGCTTT...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCAGCAACACGTTTTCTaGTTTCAAGTCACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLQQHVF*FQVTVD
Trigger: GTCCACTGTGACTTGAAACCAGAAAACGTGTTGCTG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCACGTGGGGTCATGTTTaGAAAGCAGGATCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGITWGHV*KAGSCR
Trigger: ACGACAAGATCCTGCTTTTCAAACATGACCCCACGT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCAAGGTGGCATTGGCAGTaGCGATCTCAAAGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPRWHWQ*RSQSSV
Trigger: CACACTGCTTTGAGATCGTCACTGCCAATGCCACCT...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGACATTCTCTTGGATCTaGCTGTTGGACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQTFSWI*LLDTEM
Trigger: CATCTCTGTGTCCAACAGTCAGATCCAAGAGAATGT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTAATCCCAGGATCCAGTaGTCCAAGAAGAGGATCCCA +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPNPRIQ*SKKRIP
Trigger: TGGGATCCTCTTCTTGGAGCACTGGATCCTGGGATT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000291281.9
CDS-3UTR GCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTGTTGGACACAGAGATaGTCAGAGAAGCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGCWTQR*SEKLVC
Trigger: ACAGACAAGCTTCTCTGAGCATCTCTGTGTCCAACA...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGTTGGACACAGAGATaGTCAGAGAAGCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHCWTQR*SEKLVC
Trigger: ACAGACAAGCTTCTCTGAGCATCTCTGTGTCCAACA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQPRTVH*WDPVKN
Trigger: GTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCCTAGAACAGTTCATTaGTGGGATCCTGTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGPRTVH*WDPVKN
Trigger: GTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR GCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGTAATGATTCGAGAGTaGCGTGTGCTGAGATCAAGG +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIVMIRE*RVLRSR
Trigger: CCTTGATCTCAGCACACGGCACTCTCGAATCATTAC...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCACTTCTGGTCCACGATaGAACAGGCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKATSGPR*NRPAAS
Trigger: TGAAGCAGCTGGCCTGTTCCATCGTGGACCAGAAGT...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTTGGTCGTGTTGTTCTaGAAGAGCGTGATACACTTG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQLVVLF*KSVIHL
Trigger: CAAGTGTATCACGCTCTTCCAGAACAACACGACCAA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGCTTGGATCTGACTGTTaGACACAGAGATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWLGSDC*TQRCSE
Trigger: CTCTGAGCATCTCTGTGTCCAACAGTCAGATCCAAG...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGAGATCTGGTAGACAGTaGCAATGTCCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQRSGRQ*QCPHSL
Trigger: AAGAGAATGTGGACATTGCCACTGTCTACCAGATCT...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATCAGCAACACGTTTTCTaGTTTCAAGTCACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHQQHVF*FQVTVD
Trigger: GTCCACTGTGACTTGAAACCAGAAAACGTGTTGCTG...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTATGAAGGCGGCGTTCTaGATCTGGTCATTGATGTCC +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCMKAAF*IWSLMS
Trigger: GGACATCAATGACCAGATCCAGAACGCCGCCTTCAT...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCGTCCGTTTTAATTGCTaGGGAAACAGGGAGGGGCCT +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKAVRFNC*GNREGP
Trigger: AGGCCCCTCCCTGTTTCCCCAGCAATTAAAACGGAC...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTACGTGGGGTCATGTTTaGAAAGCAGGATCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPTWGHV*KAGSCR
Trigger: ACGACAAGATCCTGCTTTTCAAACATGACCCCACGT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCACCGTGAGGATTTCTaGCAGCGGAATTTCCTTATA +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIHREDF*QRNFLI
Trigger: TATAAGGAAATTCCGCTGTCAGAAATCCTCACGGTG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCACCGTGAGGATTTCTaGCAGCGGAATTTCCTTATA +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIHREDF*QRNFLI
Trigger: TATAAGGAAATTCCGCTGTCAGAAATCCTCACGGTG...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGACATTCTCTTGGATCTaGCTGTTGGACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWTFSWI*LLDTEM
Trigger: CATCTCTGTGTCCAACAGTCAGATCCAAGAGAATGT...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGAGTGGACAATGTTCTTaGAGTGAAGGTGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQSGQCS*SEGVSK
Trigger: CTTTGAGACACCTTCACTTCAAGAACATTGTCCACT...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGAGTGGACAATGTTCTTaGAGTGAAGGTGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGSGQCS*SEGVSK
Trigger: CTTTGAGACACCTTCACTTCAAGAACATTGTCCACT...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGTCACACAGCTTCACCTaGGGAAATGGGTCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LVQQSNDSRVPCAEIKAMSHSFT*GNGSAD
Trigger: ATCAGCAGACCCATTTCCTCAGGTGAAGCTGTGTGA...CATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR GCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCTTGCGCATCTTCACCTaGAGCAGGTTGTTGATGAGG +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKALRIFT*SRLLMR
Trigger: CCTCATCAACAACCTGCTGCAGGTGAAGATGCGCAA...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCCTTATAGTATCTGTTaGTCGTGTTGTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLPYSIC*SCCSGR
Trigger: TCTTCCAGAACAACACGACCAACAGATACTATAAGG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATAGATCTGGTAGACAGTaGCAATGTCCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHRSGRQ*QCPHSL
Trigger: AAGAGAATGTGGACATTGCCACTGTCTACCAGATCT...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGAGATCTGGTAGACAGTaGCAATGTCCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGRSGRQ*QCPHSL
Trigger: AAGAGAATGTGGACATTGCCACTGTCTACCAGATCT...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGCAGCAACACGTTTTCTaGTTTCAAGTCACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWQQHVF*FQVTVD
Trigger: GTCCACTGTGACTTGAAACCAGAAAACGTGTTGCTG...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCAACGTGGGGTCATGTTTaGAAAGCAGGATCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: CWYNRVMIRECRVLRSRPTWGHV*KAGSCR
Trigger: ACGACAAGATCCTGCTTTTCAAACATGACCCCACGT...TGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR TCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTACATTCTCTTGGATCTaGCTGTTGGACACAGAGATG +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPTFSWI*LLDTEM
Trigger: CATCTCTGTGTCCAACAGTCAGATCCAAGAGAATGT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGAGTGGACAATGTTCTTaGAGTGAAGGTGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWSGQCS*SEGVSK
Trigger: CTTTGAGACACCTTCACTTCAAGAACATTGTCCACT...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTTGGTCGTGTTGTTCTaGAAGAGCGTGATACACTTG +
Preference number: 4 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCLVVLF*KSVIHL
Trigger: CAAGTGTATCACGCTCTTCCAGAACAACACGACCAA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCCTTGGATCTGACTGTTaGACACAGAGATGCTCAGAG +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKALGSDC*TQRCSE
Trigger: CTCTGAGCATCTCTGTGTCCAACAGTCAGATCCAAG...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCAGATCTGGTAGACAGTaGCAATGTCCACATTCTCTT +
Preference number: 4 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIRSGRQ*QCPHSL
Trigger: AAGAGAATGTGGACATTGCCACTGTCTACCAGATCT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTCAGCAACACGTTTTCTaGTTTCAAGTCACAGTGGAC +
Preference number: 4 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPQQHVF*FQVTVD
Trigger: GTCCACTGTGACTTGAAACCAGAAAACGTGTTGCTG...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CCA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCCTTATAGTATCTGTTaGTCGTGTTGTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIPYSIC*SCCSGR
Trigger: TCTTCCAGAACAACACGACCAACAGATACTATAAGG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR TCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCAGTGGACAATGTTCTTaGAGTGAAGGTGTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKASGQCS*SEGVSK
Trigger: CTTTGAGACACCTTCACTTCAAGAACATTGTCCACT...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CCA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCCCTTATAGTATCTGTTaGTCGTGTTGTTCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKAPYSIC*SCCSGR
Trigger: TCTTCCAGAACAACACGACCAACAGATACTATAAGG...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp GTGCCGAGGCGCACCGAGTGGCCACTGGCCAGAGACGTGGATGACAGGCGCCGTCCGCAGCCATCGCACTaGAGGCCCTGGCGCACTAGG +
Preference number: 5 (lower is better)
Translates to: VPRRTEWPLARDVDDRRRPQPSH*RPWRTR
Trigger: CCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCGG...ACGGCGCCTGTCATCCACGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS CCA 90 bp AAGGTGGCCGAGGCCGACAGCACCACCTCCACCAGGTCGCCCTCCTaGATGTCTCCGGACGAGCGCACCAGCTGCAGGAGGTTGGCCGAC +
Preference number: 5 (lower is better)
Translates to: KVAEADSTTSTRSPS*MSPDERTSCRRLAD
Trigger: GTCGGCCAACCTCCTGCAGCTGGTGCGCTCGTCCGGAGACATCCAGGAGGGCGACCTGGTGGAGGTGGTGCTGTCGGCCTCGGCCACCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595132.5
ENST00000595515.5
ENST00000597088.1
ENST00000598633.1
ENST00000600194.5
ENST00000601605.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCAGCCCCCTGCCCACTaGGCCCACCCGGAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGQPPAH*AHPESR
Trigger: GCGGGACTCCGGGTGGGCCAAGTGGGCAGGGGGCTG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TCTTCAGCCGTGCAGGGCAGGGACTCGGAGGTGCCGAGGCGCACCGAGTGGCCAGATGACAGGCGCCGTTaGCGGGCCCCACTACAGTTG +
Preference number: 5 (lower is better)
Translates to: SSAVQGRDSEVPRRTEWPDDRRR*RAPLQL
Trigger: CAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATC...TGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCACGGCTGAAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS TCA 90 bp GCGGCGGGCAACAGCACGAACTCGCGGGTCAGCCCGATCTGGATGTaGAAGGAGACCCCGGAACCCGGGGCCGGGATGAGTCGCAGAAGT +
Preference number: 5 (lower is better)
Translates to: AAGNSTNSRVSPIWM*KETPEPGAGMSRRS
Trigger: ACTTCTGCGACTCATCCCGGCCCCGGGTTCCGGGGTCTCCTTTCACATCCAGATCGGGCTGACCCGCGAGTTCGTGCTGTTGCCCGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS TCA 90 bp GGCCGAGGCTTCTGGTCCACGATGGAACAGGCCAGCTGCTTCACATaGGCCAGCTCGGAGGCGGCGGGCAACAGCACGAACTCGCGGGTC +
Preference number: 5 (lower is better)
Translates to: GRGFWSTMEQASCFT*ASSEAAGNSTNSRV
Trigger: GACCCGCGAGTTCGTGCTGTTGCCCGCCGCCTCCGAGCTGGCTCATGTGAAGCAGCTGGCCTGTTCCATCGTGGACCAGAAGCCTCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR CAA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACCGCAGCCATCGCACTaGAGGCCCTGGCGCACTAGG +
Preference number: 5 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTPQPSH*RPWRTR
Trigger: CCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCGG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CGGCGAGGCAGGAGTTCGGTGGTGCTACGGCTCAGCTCTTCAGCCGTGCAGGGCCGGGCCCCACTACAGTaGTTGGGGATGCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: RRGRSSVVLRLSSSAVQGRAPLQ*LGMLKA
Trigger: TGCCTTCAGCATCCCCAACAACTGTAGTGGGGCCCG...GCCCTGCACGGCTGAAGAGCTGAGCCGTAGCACCACCGAACTCCTGCCTCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS GCA 90 bp TCCCGCAGCGTGGTGCTGGATTTCCGCGTCGTGTGTCGCACCGATTaGACCACCCTCATTAGGGGGATGTACCCCAGGGAGCTCTGGGCC +
Preference number: 5 (lower is better)
Translates to: SRSVVLDFRVVCRTD*TTLIRGMYPRELWA
Trigger: GGCCCAGAGCTCCCTGGGGTACATCCCCCTAATGAGGGTGGTGCAATCGGTGCGACACACGACGCGGAAATCCAGCACCACGCTGCGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS GCA 90 bp GCCGGGGGACTTGGACTCGAGGGCGCTGGAGATAAGGAGGGCGCCTaGCACCCAATGCTCAAAGGACCCAGGTGTCTGGGTCCTCAGCTT +
Preference number: 5 (lower is better)
Translates to: AGGLGLEGAGDKEGA*HPMLKGPRCLGPQL
Trigger: AAGCTGAGGACCCAGACACCTGGGTCCTTTGAGCATTGGGTGGCAGGCGCCCTCCTTATCTCCAGCGCCCTCGAGTCCAAGTCCCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595132.5
CDS-3UTR CAA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACCGGGGGAATTCACCTaGGGGGTGGAGGGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTPGEFT*GVEGRS
Trigger: ACTCCTGCCCTCCACCCCCAAGGTGAATTCCCCCGG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000291281.9
CDS TCA 90 bp TCAGGGAACTTCTGGTCCACGATGGAACAGGCCAGCTGCTTCACATaGGCCAGCTCGGAGGCGGCGGGCAACAGCACGAACTCGCGGGTC +
Preference number: 5 (lower is better)
Translates to: SGNFWSTMEQASCFT*ASSEAAGNSTNSRV
Trigger: GACCCGCGAGTTCGTGCTGTTGCCCGCCGCCTCCGAGCTGGCTCATGTGAAGCAGCTGGCCTGTTCCATCGTGGACCAGAAGTTCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000598633.1
ENST00000601806.5
CDS TCA 90 bp GAGTCCCGCCAGGCATCTCGCCCACGAAGTAGGTGGCATTGGCAGTaGCGATCTCAAAGCAGTGTGGGTTGGTGCCCGGCGGCACAAGGC +
Preference number: 5 (lower is better)
Translates to: ESRQASRPRSRWHWQ*RSQSSVGWCPAAQG
Trigger: GCCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGAGATCGTCACTGCCAATGCCACCTACTTCGTGGGCGAGATGCCTGGCGGGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS GCA 90 bp TTGGACTCGAGGGCGCTGGAGATAAGGAGGGCGCCTGCCACCCAATaGTCAAAGGACCCAGGTGTCTGGGTCCTCAGCTTTGGGGGCCTG +
Preference number: 5 (lower is better)
Translates to: LDSRALEIRRAPATQ*SKDPGVWVLSFGGL
Trigger: CAGGCCCCCAAAGCTGAGGACCCAGACACCTGGGTCCTTTGAGCATTGGGTGGCAGGCGCCCTCCTTATCTCCAGCGCCCTCGAGTCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000595132.5
CDS-3UTR CAA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGTGAGGAAGGGGGCGTaGCCGGAGCGGGGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDVRKGA*PERGWV
Trigger: CACCCAACCCCGCTCCGGCAACGCCCCCTTCCTCAC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAGATGACAGGCGCCGTTaGCGGGCCCCACTACAGTTG +
Preference number: 5 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTDDRRR*RAPLQL
Trigger: CAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATC...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATCAGCCCCCTGCCCACTaGGCCCACCCGGAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHQPPAH*AHPESR
Trigger: GCGGGACTCCGGGTGGGCCAAGTGGGCAGGGGGCTG...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS CCA 90 bp CGAGGGCCGGAGTGGGTAGAAGGGAATCTCACGAGTCGCAGAAGTTaGAGAAAAGTTCGGTCGGGAGCCGTGAGGAAGGGGGCGTTGCCG +
Preference number: 5 (lower is better)
Translates to: RGPEWVEGNLTSRRS*RKVRSGAVRKGALP
Trigger: CGGCAACGCCCCCTTCCTCACGGCTCCCGACCGAACTTTTCTCCAACTTCTGCGACTCGTGAGATTCCCTTCTACCCACTCCGGCCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000593363.1
CDS CCA 90 bp CCCTCGCCTTCCTCCTCCTCACTGGCGTGGAGCGCATTCTCTGAGTaGGAGCCAGGGATGACACCGGAGTCCTCTGACTCATCCATGAGG +
Preference number: 5 (lower is better)
Translates to: PSPSSSSLAWSAFSE*EPGMTPESSDSSMR
Trigger: CCTCATGGATGAGTCAGAGGACTCCGGTGTCATCCCTGGCTCCCACTCAGAGAATGCGCTCCACGCCAGTGAGGAGGAGGAAGGCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601605.5
ENST00000601806.5
CDS CCA 90 bp GCCCACGAAGTAGGTGGCATTGGCAGTGACGATCTCAAAGCAGTGTaGGTTGGTGCCCGGCGGCACAAGGCTGAAGTTCTGGGCGGACTC +
Preference number: 5 (lower is better)
Translates to: AHEVGGIGSDDLKAV*VGARRHKAEVLGGL
Trigger: GAGTCCGCCCAGAACTTCAGCCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGAGATCGTCACTGCCAATGCCACCTACTTCGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCCGCAGCCATCGCACTaGAGGCCCTGGCGCACTAGG +
Preference number: 5 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQPQPSH*RPWRTR
Trigger: CCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCGG...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGCCCCACTACAGTTGTaGGGGATGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGAPLQL*GMLKAQ
Trigger: CTGTGCCTTCAGCATCCCCAACAACTGTAGTGGGGC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAAAGGTGTGCGGCACCTaGACCTTGGAGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTKVCGT*TLESSI
Trigger: GATGCTGCTCTCCAAGGTCAAGGTGCCGCACACCTT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACTTGCAGTCTTTGCATaGCAGGCCCTGCCGGAAGAG +
Preference number: 5 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTLAVFA*QALPEE
Trigger: CTCTTCCGGCAGGGCCTGCAATGCAAAGACTGCAAG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCTTGCAGTCTTTGCATaGCAGGCCCTGCCGGAAGAG +
Preference number: 5 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGLAVFA*QALPEE
Trigger: CTCTTCCGGCAGGGCCTGCAATGCAAAGACTGCAAG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCAGCCCCCTGCCCACTaGGCCCACCCGGAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCQPPAH*AHPESR
Trigger: GCGGGACTCCGGGTGGGCCAAGTGGGCAGGGGGCTG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CGTGGGCAGCCCAGACCCAGGCAGCGGATGCTCTGCTGCAAACTGCTCCCAGCGGTAGGGAAGCGCAGTTaGTCAATGACCTTAACTGCC +
Preference number: 5 (lower is better)
Translates to: RGQPRPRQRMLCCKLLPAVGKRS*SMTLTA
Trigger: GGCAGTTAAGGTCATTGACAAACTGCGCTTCCCTAC...CGCTGGGAGCAGTTTGCAGCAGAGCATCCGCTGCCTGGGTCTGGGCTGCCCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CAA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACACGTGTCCCATCCAGTTaGGGCAGGAAGCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTRVPSS*GRKPLS
Trigger: GGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACG...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGTGAGGAAGGGGGCGTaGCCGGAGCGGGGTTGGGTG +
Preference number: 5 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIVRKGA*PERGWV
Trigger: CACCCAACCCCGCTCCGGCAACGCCCCCTTCCTCAC...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACACCAGCTGCAGGAGGTaGGCCGACGTGGGGTCATGT +
Preference number: 5 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDTSCRR*ADVGSC
Trigger: ACATGACCCCACGTCGGCCAACCTCCTGCAGCTGGT...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCCCCTTGAGGAGTTTCTaGCAAGCCTGGCAAACGGTG +
Preference number: 5 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGPLRSF*QAWQTV
Trigger: CACCGTTTGCCAGGCTTGCAAGAAACTCCTCAAGGG...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACTCAAAGCAGTGTGGGTaGGTGCCCGGCGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDSKQCG*VPGGTR
Trigger: CCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGA...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCCAGCCCCCTGCCCACTaGGCCCACCCGGAGTCCCGC +
Preference number: 5 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKAQPPAH*AHPESR
Trigger: GCGGGACTCCGGGTGGGCCAAGTGGGCAGGGGGCTG...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCATGTCCTCATCCTCGTaGAAAGGGAAGGTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGMSSSS*KGKVPL
Trigger: CAGCGGCACCTTCCCTTTCAACGAGGATGAGGACAT...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS GCA 90 bp TGTCCTTGTTGCTGTAATGAACCACCCAACCCTCCCGCAGCGTGGTaGTGGATTTCCGCGTCGTGTGTCGCACCGATTGCACCACCCTCA +
Preference number: 5 (lower is better)
Translates to: CPCCCNEPPNPPAAW*WISASCVAPIAPPS
Trigger: TGAGGGTGGTGCAATCGGTGCGACACACGACGCGGAAATCCAGCACCACGCTGCGGGAGGGTTGGGTGGTTCATTACAGCAACAAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGACCAGCTGCAGGAGGTaGGCCGACGTGGGGTCATGT +
Preference number: 5 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQTSCRR*ADVGSC
Trigger: ACATGACCCCACGTCGGCCAACCTCCTGCAGCTGGT...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GTTGTTGGGGATGCTGAAGGCACAGCGCTTGTGGTAGTTCAGCCCGCAGCCATCGCCCCACTACAGTTGTaGGGGATGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: VVGDAEGTALVVVQPAAIAPLQL*GMLKAQ
Trigger: CTGTGCCTTCAGCATCCCCAACAACTGTAGTGGGGC...GATGGCTGCGGGCTGAACTACCACAAGCGCTGTGCCTTCAGCATCCCCAACAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000597641.1
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGATGACAGGCGCCGTTaGCGGGCCCCACTACAGTTG +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLDDRRR*RAPLQL
Trigger: CAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATC...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGTCAAAGCAGTGTGGGTaGGTGCCCGGCGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLSKQCG*VPGGTR
Trigger: CCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGA...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGTCAAAGCAGTGTGGGTaGGTGCCCGGCGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQSKQCG*VPGGTR
Trigger: CCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGA...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCACAACCTGCAGCAGGTTGTaGATGAGGTCAATGGCTCCA +
Preference number: 5 (lower is better)
Translates to: CWDPVKNRCGGQQLDEGTTCSRL*MRSMAP
Trigger: TGGAGCCATTGACCTCATCAACAACCTGCTGCAGGT...TGTGCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS CCA 90 bp CCTTGTTGCTGTAATGAACCACCCAACCCTCCCGCAGCGTGGTGCTaGATTTCCGCGTCGTGTGTCGCACCGATTGCACCACCCTCATTA +
Preference number: 5 (lower is better)
Translates to: PCCCNEPPNPPAAWC*ISASCVAPIAPPSL
Trigger: TAATGAGGGTGGTGCAATCGGTGCGACACACGACGCGGAAATCCAGCACCACGCTGCGGGAGGGTTGGGTGGTTCATTACAGCAACAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCCGCAGCCATCGCACTaGAGGCCCTGGCGCACTAGG +
Preference number: 5 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCPQPSH*RPWRTR
Trigger: CCTAGTGCGCCAGGGCCTCAAGTGCGATGGCTGCGG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGCCCCACTACAGTTGTaGGGGATGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDAPLQL*GMLKAQ
Trigger: CTGTGCCTTCAGCATCCCCAACAACTGTAGTGGGGC...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACTTGGAGAGCAGCATCTaGTCCAGCTCAATGGGGCGG +
Preference number: 5 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDLESSI*SSSMGR
Trigger: CCGCCCCATTGAGCTGGACAAGATGCTGCTCTCCAA...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACGAGGGCGTAGGGAAGCGCAGTTaGTCAATGACCTTAACTGCC +
Preference number: 5 (lower is better)
Translates to: HCWDPVKNRCGGQQLDEGVGKRS*SMTLTA
Trigger: GGCAGTTAAGGTCATTGACAAACTGCGCTTCCCTAC...GCCCTCGTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS CCA 90 bp TCAAAGCAGTGTGGGTTGGTGCCCGGCGGCACAAGGCTGAAGTTCTaGGCGGACTCCACCGTGAGGATTTCTGACAGCGGAATTTCCTTA +
Preference number: 5 (lower is better)
Translates to: SKQCGLVPGGTRLKF*ADSTVRISDSGISL
Trigger: TAAGGAAATTCCGCTGTCAGAAATCCTCACGGTGGAGTCCGCCCAGAACTTCAGCCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATACCAGCTGCAGGAGGTaGGCCGACGTGGGGTCATGT +
Preference number: 5 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDTSCRR*ADVGSC
Trigger: ACATGACCCCACGTCGGCCAACCTCCTGCAGCTGGT...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATCGGGCCCCACTACAGTaGTTGGGGATGCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHRAPLQ*LGMLKA
Trigger: TGCCTTCAGCATCCCCAACAACTGTAGTGGGGCCCG...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGATGACAGGCGCCGTTaGCGGGCCCCACTACAGTTG +
Preference number: 5 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDDDRRR*RAPLQL
Trigger: CAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGTTGGAGAGCAGCATCTaGTCCAGCTCAATGGGGCGG +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLLESSI*SSSMGR
Trigger: CCGCCCCATTGAGCTGGACAAGATGCTGCTCTCCAA...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGGCCAGAGCTTGCAGTCTTTGCATaGCAGGCCCTGCCGGAAGAG +
Preference number: 5 (lower is better)
Translates to: QSNDSRVPCAEIKAMGPELAVFA*QALPEE
Trigger: CTCTTCCGGCAGGGCCTGCAATGCAAAGACTGCAAG...CTCTGGCCCCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGATCGGCACATCTCCATaGATAAGGGCCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLIGTSP*IRASPR
Trigger: CCTGGGGGAGGCCCTTATCAATGGAGATGTGCCGAT...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGTCCATGAGGGCGCTCTaGTCAGCCTCGCTGAAATCG +
Preference number: 5 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQSMRAL*SASLKS
Trigger: CGATTTCAGCGAGGCTGACAAGAGCGCCCTCATGGA...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGTCCATGAGGGCGCTCTaGTCAGCCTCGCTGAAATCG +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLSMRAL*SASLKS
Trigger: CGATTTCAGCGAGGCTGACAAGAGCGCCCTCATGGA...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGTCAAAGCAGTGTGGGTaGGTGCCCGGCGGCACAAGG +
Preference number: 5 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWSKQCG*VPGGTR
Trigger: CCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGA...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACATGTCCTCATCCTCGTaGAAAGGGAAGGTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDMSSSS*KGKVPL
Trigger: CAGCGGCACCTTCCCTTTCAACGAGGATGAGGACAT...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCGTGTCCCATCCAGTTaGGGCAGGAAGCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLRVPSS*GRKPLS
Trigger: GGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGCACGAGTCGCAGAAGTaGGAGAAAAGTTCGGTCGGG +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLHESQK*EKSSVG
Trigger: CCCGACCGAACTTTTCTCCAACTTCTGCGACTCGTG...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CAA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCGGGCCCCACTACAGTaGTTGGGGATGCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIRAPLQ*LGMLKA
Trigger: TGCCTTCAGCATCCCCAACAACTGTAGTGGGGCCCG...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTCGGGCCCCACTACAGTaGTTGGGGATGCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIRAPLQ*LGMLKA
Trigger: TGCCTTCAGCATCCCCAACAACTGTAGTGGGGCCCG...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGATGACAGGCGCCGTTaGCGGGCCCCACTACAGTTG +
Preference number: 5 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPDDRRR*RAPLQL
Trigger: CAACTGTAGTGGGGCCCGCAAACGGCGCCTGTCATC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTTGGAGAGCAGCATCTaGTCCAGCTCAATGGGGCGG +
Preference number: 5 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQLESSI*SSSMGR
Trigger: CCGCCCCATTGAGCTGGACAAGATGCTGCTCTCCAA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCTTGCAGTCTTTGCATaGCAGGCCCTGCCGGAAGAG +
Preference number: 5 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGLAVFA*QALPEE
Trigger: CTCTTCCGGCAGGGCCTGCAATGCAAAGACTGCAAG...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCACGAGTCGCAGAAGTaGGAGAAAAGTTCGGTCGGG +
Preference number: 5 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQHESQK*EKSSVG
Trigger: CCCGACCGAACTTTTCTCCAACTTCTGCGACTCGTG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000291281.9
ENST00000433867.5
CDS-3UTR CAA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCACCAGCTGCAGGAGGTaGGCCGACGTGGGGTCATGT +
Preference number: 5 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKATSCRR*ADVGSC
Trigger: ACATGACCCCACGTCGGCCAACCTCCTGCAGCTGGT...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGCCCCACTACAGTTGTaGGGGATGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWAPLQL*GMLKAQ
Trigger: CTGTGCCTTCAGCATCCCCAACAACTGTAGTGGGGC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTCGGGCCCCACTACAGTaGTTGGGGATGCTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPRAPLQ*LGMLKA
Trigger: TGCCTTCAGCATCCCCAACAACTGTAGTGGGGCCCG...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTTTGGAGAGCAGCATCTaGTCCAGCTCAATGGGGCGG +
Preference number: 5 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFILESSI*SSSMGR
Trigger: CCGCCCCATTGAGCTGGACAAGATGCTGCTCTCCAA...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTAAGGTGTGCGGCACCTaGACCTTGGAGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIKVCGT*TLESSI
Trigger: GATGCTGCTCTCCAAGGTCAAGGTGCCGCACACCTT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCAAGGTGTGCGGCACCTaGACCTTGGAGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIKVCGT*TLESSI
Trigger: GATGCTGCTCTCCAAGGTCAAGGTGCCGCACACCTT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATCCCTTGAGGAGTTTCTaGCAAGCCTGGCAAACGGTG +
Preference number: 5 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHPLRSF*QAWQTV
Trigger: CACCGTTTGCCAGGCTTGCAAGAAACTCCTCAAGGG...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCCCTTGAGGAGTTTCTaGCAAGCCTGGCAAACGGTG +
Preference number: 5 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQPLRSF*QAWQTV
Trigger: CACCGTTTGCCAGGCTTGCAAGAAACTCCTCAAGGG...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCATCGGCACATCTCCATaGATAAGGGCCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIIGTSP*IRASPR
Trigger: CCTGGGGGAGGCCCTTATCAATGGAGATGTGCCGAT...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTATCGGCACATCTCCATaGATAAGGGCCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIIGTSP*IRASPR
Trigger: CCTGGGGGAGGCCCTTATCAATGGAGATGTGCCGAT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTCCATGAGGGCGCTCTaGTCAGCCTCGCTGAAATCG +
Preference number: 5 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGISMRAL*SASLKS
Trigger: CGATTTCAGCGAGGCTGACAAGAGCGCCCTCATGGA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATGTCCTCATCCTCGTTGAAAGGGAAGGTGCCGCTGAGGCTGACGTACATGATCATGTCCTCATCCTCGTaGAAAGGGAAGGTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: MSSSSLKGKVPLRLTYMIMSSSS*KGKVPL
Trigger: CAGCGGCACCTTCCCTTTCAACGAGGATGAGGACAT...GATCATGTACGTCAGCCTCAGCGGCACCTTCCCTTTCAACGAGGATGAGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGACCTGCAGCAGGTTGTaGATGAGGTCAATGGCTCCA +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLTCSRL*MRSMAP
Trigger: TGGAGCCATTGACCTCATCAACAACCTGCTGCAGGT...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGACCTGCAGCAGGTTGTaGATGAGGTCAATGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQTCSRL*MRSMAP
Trigger: TGGAGCCATTGACCTCATCAACAACCTGCTGCAGGT...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGGACTTCACCTGCAGCAGGTaGTTGATGAGGTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: TVHCWDPVKNRCGGQQLDFTCSR*LMRSMA
Trigger: AGCCATTGACCTCATCAACAACCTGCTGCAGGTGAA...GTCCAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS CCA 90 bp TCTGGTAGACAGTGGCAATGTCCACATTCTCTTGGATCTGACTGTTaGACACAGAGATGCTCAGAGAAGCTTGTCTGTGGGGCGCGTGGC +
Preference number: 5 (lower is better)
Translates to: SGRQWQCPHSLGSDC*TQRCSEKLVCGARG
Trigger: GCCACGCGCCCCACAGACAAGCTTCTCTGAGCATCTCTGTGTCCAACAGTCAGATCCAAGAGAATGTGGACATTGCCACTGTCTACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGCCCCACTACAGTTGTaGGGGATGCTGAAGGCACAG +
Preference number: 5 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPAPLQL*GMLKAQ
Trigger: CTGTGCCTTCAGCATCCCCAACAACTGTAGTGGGGC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTAAGGTGTGCGGCACCTaGACCTTGGAGAGCAGCATC +
Preference number: 5 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPKVCGT*TLESSI
Trigger: GATGCTGCTCTCCAAGGTCAAGGTGCCGCACACCTT...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCCCTTGAGGAGTTTCTaGCAAGCCTGGCAAACGGTG +
Preference number: 5 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIPLRSF*QAWQTV
Trigger: CACCGTTTGCCAGGCTTGCAAGAAACTCCTCAAGGG...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGTTAAACTTGCAGTCTTaGCATTGCAGGCCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: FPRTVHCWDPVKNRCGGQLNLQS*HCRPCR
Trigger: CCGGCAGGGCCTGCAATGCAAAGACTGCAAGTTTAA...CTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGGTAGGGAAGCGCAGTTaGTCAATGACCTTAACTGCC +
Preference number: 5 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQVGKRS*SMTLTA
Trigger: GGCAGTTAAGGTCATTGACAAACTGCGCTTCCCTAC...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGTTCACCTGCAGCAGGTaGTTGATGAGGTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: PRTVHCWDPVKNRCGGQQFTCSR*LMRSMA
Trigger: AGCCATTGACCTCATCAACAACCTGCTGCAGGTGAA...CTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTCGTGTCCCATCCAGTTaGGGCAGGAAGCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCRVPSS*GRKPLS
Trigger: GGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACG...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTCGTGTCCCATCCAGTTaGGGCAGGAAGCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPRVPSS*GRKPLS
Trigger: GGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACG...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATGACGTGGGGTCATGTTaGAAAAGCAGGATCTTGTCG +
Preference number: 5 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHDVGSC*KSRILS
Trigger: CGACAAGATCCTGCTTTTCAAACATGACCCCACGTC...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTTAAACTTGCAGTCTTaGCATTGCAGGCCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGILNLQS*HCRPCR
Trigger: CCGGCAGGGCCTGCAATGCAAAGACTGCAAGTTTAA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTATGTCCTCATCCTCGTaGAAAGGGAAGGTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCMSSSS*KGKVPL
Trigger: CAGCGGCACCTTCCCTTTCAACGAGGATGAGGACAT...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTACCTGCAGCAGGTTGTaGATGAGGTCAATGGCTCCA +
Preference number: 5 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFITCSRL*MRSMAP
Trigger: TGGAGCCATTGACCTCATCAACAACCTGCTGCAGGT...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTTCACCTGCAGCAGGTaGTTGATGAGGTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: VPSSLGRKPLSLEQFIAGFTCSR*LMRSMA
Trigger: AGCCATTGACCTCATCAACAACCTGCTGCAGGTGAA...CCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCCGTGTCCCATCCAGTTaGGGCAGGAAGCCACTTTCC +
Preference number: 5 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKARVPSS*GRKPLS
Trigger: GGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACG...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGAGTCGCAGAAGTaGGAGAAAAGTTCGGTCGGG +
Preference number: 5 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWDESQK*EKSSVG
Trigger: CCCGACCGAACTTTTCTCCAACTTCTGCGACTCATC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS TCA 90 bp AGAGAGAGAGAAAGAAGAGCGAGCAGGCAAAAAGAGAGGAAGAGATaGAGGCCAGAAAGAGAAACCCCCTCAGCTGCTGAAAGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: RERERRASRQKERKR*RPERETPSAAESSH
Trigger: GTGGCTGCTTTCAGCAGCTGAGGGGGTTTCTCTTTCTGGCCTTCATCTCTTCCTCTCTTTTTGCCTGCTCGCTCTTCTTTCTCTCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000593492.1
CDS-3UTR CAA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGAGAAAAGTAGTGGGTaGGAGGTCCCAGCGATTGAG +
Preference number: 5 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPEKSSG*EVPAIE
Trigger: CTCAATCGCTGGGACCTCCAACCCACTACTTTTCTC...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000291281.9
CDS-3UTR CAA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGACGTGGGGTCATGTTaGAAAAGCAGGATCTTGTCG +
Preference number: 5 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIDVGSC*KSRILS
Trigger: CGACAAGATCCTGCTTTTCAAACATGACCCCACGTC...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATGACGTGGGGTCATGTTaGAAAAGCAGGATCTTGTCG +
Preference number: 5 (lower is better)
Translates to: PIQFGQEATFPRTVHCWDDVGSC*KSRILS
Trigger: CGACAAGATCCTGCTTTTCAAACATGACCCCACGTC...ATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTTTAAACTTGCAGTCTTaGCATTGCAGGCCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPLNLQS*HCRPCR
Trigger: CCGGCAGGGCCTGCAATGCAAAGACTGCAAGTTTAA...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTTAAACTTGCAGTCTTaGCATTGCAGGCCCTGCCGG +
Preference number: 5 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCLNLQS*HCRPCR
Trigger: CCGGCAGGGCCTGCAATGCAAAGACTGCAAGTTTAA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp AGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTGGAGGGCAGCAGCTGTATCTGTTGGTCGTGTaGTTCTGGAAGAGCGTGATA +
Preference number: 5 (lower is better)
Translates to: RTVHCWDPVKNRCGGQQLYLLVV*FWKSVI
Trigger: TATCACGCTCTTCCAGAACAACACGACCAACAGATA...CAGCTGCTGCCCTCCACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGTAGGGAAGCGCAGTTaGTCAATGACCTTAACTGCC +
Preference number: 5 (lower is better)
Translates to: CPIQFGQEATFPRTVHCWVGKRS*SMTLTA
Trigger: GGCAGTTAAGGTCATTGACAAACTGCGCTTCCCTAC...CCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGATGTCCTCATCCTCGTaGAAAGGGAAGGTGCCGCTG +
Preference number: 5 (lower is better)
Translates to: LVQQSNDSRVPCAEIKAMMSSSS*KGKVPL
Trigger: CAGCGGCACCTTCCCTTTCAACGAGGATGAGGACAT...CATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp CCCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTTCTGGATCTGGTCATaGATGTCCTCATCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: PTCPIQFGQEATFPRTVHFWIWS*MSSSSL
Trigger: CAACGAGGATGAGGACATCAATGACCAGATCCAGAA...ATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CGGGTACATGAAGGCGGCGTTCTGGATCTGGTCATTGATGTCCTCATCCTCGTTTTCTGGATCTGGTCATaGATGTCCTCATCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: RVHEGGVLDLVIDVLILVFWIWS*MSSSSL
Trigger: CAACGAGGATGAGGACATCAATGACCAGATCCAGAA...AACGAGGATGAGGACATCAATGACCAGATCCAGAACGCCGCCTTCATGTACCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597390.5
CDS-3UTR CAA 90 bp TGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGACCTGCAGCAGGTTGTaGATGAGGTCAATGGCTCCA +
Preference number: 5 (lower is better)
Translates to: WYNRVMIRECRVLRSRPWTCSRL*MRSMAP
Trigger: TGGAGCCATTGACCTCATCAACAACCTGCTGCAGGT...CCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTTCACCTGCAGCAGGTaGTTGATGAGGTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIFTCSR*LMRSMA
Trigger: AGCCATTGACCTCATCAACAACCTGCTGCAGGTGAA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp TGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCATGGGACGTGGGGTCATGTTaGAAAAGCAGGATCTTGTCG +
Preference number: 5 (lower is better)
Translates to: WYNRVMIRECRVLRSRPWDVGSC*KSRILS
Trigger: CGACAAGATCCTGCTTTTCAAACATGACCCCACGTC...CCATGGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp CCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCTTCTGGATCTGGTCATaGATGTCCTCATCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: PSSLGRKPLSLEQFIAGIFWIWS*MSSSSL
Trigger: CAACGAGGATGAGGACATCAATGACCAGATCCAGAA...GATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTTCACCTGCAGCAGGTaGTTGATGAGGTCAATGGCT +
Preference number: 5 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCFTCSR*LMRSMA
Trigger: AGCCATTGACCTCATCAACAACCTGCTGCAGGTGAA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp CCACGTGTCCCATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTTATCTGTTGGTCGTGTaGTTCTGGAAGAGCGTGATA +
Preference number: 5 (lower is better)
Translates to: PRVPSSLGRKPLSLEQFIYLLVV*FWKSVI
Trigger: TATCACGCTCTTCCAGAACAACACGACCAACAGATA...AATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGATGGGACACGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp ATGTTGGTACAACAGAGTAATGATTCGAGAGTGCCGTGTGCTGAGATCAAGGCCGTAGGGAAGCGCAGTTaGTCAATGACCTTAACTGCC +
Preference number: 5 (lower is better)
Translates to: MLVQQSNDSRVPCAEIKAVGKRS*SMTLTA
Trigger: GGCAGTTAAGGTCATTGACAAACTGCGCTTCCCTAC...GGCCTTGATCTCAGCACACGGCACTCTCGAATCATTACTCTGTTGTACCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601806.5
CDS-3UTR CAA 90 bp ATCCAGTTTGGGCAGGAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTTTCTGGATCTGGTCATaGATGTCCTCATCCTCGTTG +
Preference number: 5 (lower is better)
Translates to: IQFGQEATFPRTVHCWDPFWIWS*MSSSSL
Trigger: CAACGAGGATGAGGACATCAATGACCAGATCCAGAA...AGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTCCTGCCCAAACTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000597390.5
ENST00000600194.5
ENST00000601806.5
CDS-3UTR CAA 90 bp GAAGCCACTTTCCCTAGAACAGTTCATTGCTGGGATCCTGTGAAGAACCGCTGTTATCTGTTGGTCGTGTaGTTCTGGAAGAGCGTGATA +
Preference number: 5 (lower is better)
Translates to: EATFPRTVHCWDPVKNRCYLLVV*FWKSVI
Trigger: TATCACGCTCTTCCAGAACAACACGACCAACAGATA...ACAGCGGTTCTTCACAGGATCCCAGCAATGAACTGTTCTAGGGAAAGTGGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000600194.5
ENST00000601806.5
CDS GCA 72 bp CCAGCTCTTCAGCCGTGCAGGGCAGGGACTCGGAGGTaGCGAGGCGCACCGAGTGGCCACTGGCCAGAGACG +
Preference number: 6 (lower is better)
Translates to: PALQPCRAGTRR*RGAPSGHWPET
Trigger: CGTCTCTGGCCAGTGGCCACTCGGTGCGCCTCGGCACCTCCGAGTCCCTGCCCTGCACGGCTGAAGAGCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595132.5
CDS TCA 72 bp GATCACAGAAGGCAGGCGCCCGATAGGAGTGCACCGTaGGGGCGTGCGGGCGGATCTGGAAGTCCTCGAAGG +
Preference number: 6 (lower is better)
Translates to: DHRRQAPDRSAP*GRAGGSGSPRR
Trigger: CCTTCGAGGACTTCCAGATCCGCCCGCACGCCCTCACGGTGCACTCCTATCGGGCGCCTGCCTTCTGTGATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595132.5
ENST00000595515.5
ENST00000597088.1
ENST00000597641.1
ENST00000598633.1
ENST00000600194.5
ENST00000601605.5
ENST00000601806.5
CDS TCA 72 bp CCCCGCCCCCAACCCTTTAGCTCTCACCATCGCACTTaGGGCCCTGGCGCACTAGGCCGAAGAGCATCTCCC +
Preference number: 6 (lower is better)
Translates to: PRPQPFSSHHRT*GPGALGRRASP
Trigger: GGGAGATGCTCTTCGGCCTAGTGCGCCAGGGCCTCAAGTGCGATGGTGAGAGCTAAAGGGTTGGGGGCGGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000597088.1
CDS GCA 72 bp GCCAGACTTTCCTGCCCAGTCCCTATCCCGTGGAGCTaGTTGGGGCTCCAGGTGCCTGGAGCACCACGTGCA +
Preference number: 6 (lower is better)
Translates to: ARLSCPVPIPWS*LGLQVPGAPRA
Trigger: TGCACGTGGTGCTCCAGGCACCTGGAGCCCCAAGCAGCTCCACGGGATAGGGACTGGGCAGGAAAGTCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597589.5
CDS CCA 72 bp GCCAGGGGATGGGCAGAGGGGTCCCGAGGGCCGGAGTaGGTAGAAGGGAATCTCACGAGTCGCAGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: ARGWAEGSRGPE*VEGNLTSRRSW
Trigger: CCAACTTCTGCGACTCGTGAGATTCCCTTCTACCCACTCCGGCCCTCGGGACCCCTCTGCCCATCCCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000593363.1
CDS CCA 72 bp GCGCCTGCCACCCAATGCTCAAAGGACCCAGGTGTCTaGGTCCTCAGCTTTGGGGGCCTGGGGGCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: APATQCSKDPGV*VLSFGGLGAGN
Trigger: ATTTCCTGCCCCCAGGCCCCCAAAGCTGAGGACCCAGACACCTGGGTCCTTTGAGCATTGGGTGGCAGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000595132.5
CDS CAA 90 bp CCGAGGGCCGGAGTGGGTAGAAGGGAATCTCACGAGTCGCAGAAGTaGGAGAAAAGTTCGGTCGGGAGCCGTGAGGAAGGGGGCGTTGCC +
Preference number: 6 (lower is better)
Translates to: PRAGVGRRESHESQK*EKSSVGSREEGGVA
Trigger: GGCAACGCCCCCTTCCTCACGGCTCCCGACCGAACTTTTCTCCAACTTCTGCGACTCGTGAGATTCCCTTCTACCCACTCCGGCCCTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000593363.1
CDS TCA 72 bp TTCTGGTCCACGATGGAACAGGCCAGCTGCTTCACATaGGCCAGCTCGGAGGCGGCGGGCAACAGCACGAAC +
Preference number: 6 (lower is better)
Translates to: FWSTMEQASCFT*ASSEAAGNSTN
Trigger: GTTCGTGCTGTTGCCCGCCGCCTCCGAGCTGGCTCATGTGAAGCAGCTGGCCTGTTCCATCGTGGACCAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597641.1
ENST00000598633.1
ENST00000601806.5
CDS GCA 72 bp TCGCCCTCCTGGATGTCTCCGGACGAGCGCACCAGCTaGAGGAGGTTGGCCGACGTGGGGTCATGTTTGAAA +
Preference number: 6 (lower is better)
Translates to: SPSWMSPDERTS*RRLADVGSCLK
Trigger: TTTCAAACATGACCCCACGTCGGCCAACCTCCTGCAGCTGGTGCGCTCGTCCGGAGACATCCAGGAGGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595132.5
ENST00000595515.5
ENST00000597088.1
ENST00000598633.1
ENST00000600194.5
ENST00000601605.5
ENST00000601806.5
CDS GCA 72 bp CTTGGACTCGAGGGCGCTGGAGATAAGGAGGGCGCCTaGCACCCAATGCTCAAAGGACCCAGGTGTCTGGGT +
Preference number: 6 (lower is better)
Translates to: LGLEGAGDKEGA*HPMLKGPRCLG
Trigger: ACCCAGACACCTGGGTCCTTTGAGCATTGGGTGGCAGGCGCCCTCCTTATCTCCAGCGCCCTCGAGTCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595132.5
CDS CCA 72 bp TGTGGGTTGGTGCCCGGCGGCACAAGGCTGAAGTTCTaGGCGGACTCCACCGTGAGGATTTCTGACAGCGGA +
Preference number: 6 (lower is better)
Translates to: CGLVPGGTRLKF*ADSTVRISDSG
Trigger: TCCGCTGTCAGAAATCCTCACGGTGGAGTCCGCCCAGAACTTCAGCCTTGTGCCGCCGGGCACCAACCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS GCA 72 bp GTGGTGCTGGATTTCCGCGTCGTGTGTCGCACCGATTaGACCACCCTCATTAGGGGGATGTACCCCAGGGAG +
Preference number: 6 (lower is better)
Translates to: VVLDFRVVCRTD*TTLIRGMYPRE
Trigger: CTCCCTGGGGTACATCCCCCTAATGAGGGTGGTGCAATCGGTGCGACACACGACGCGGAAATCCAGCACCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS GCA 72 bp AGGGCGCTGGAGATAAGGAGGGCGCCTGCCACCCAATaGTCAAAGGACCCAGGTGTCTGGGTCCTCAGCTTT +
Preference number: 6 (lower is better)
Translates to: RALEIRRAPATQ*SKDPGVWVLSF
Trigger: AAAGCTGAGGACCCAGACACCTGGGTCCTTTGAGCATTGGGTGGCAGGCGCCCTCCTTATCTCCAGCGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000595132.5
CDS CCA 72 bp TGGGTTCTAGATCCGCGGGATCTCGTGAGCAGGTGGTaGGAGAGCGGGGATCCGAGAAAAGATCTGGCAGGC +
Preference number: 6 (lower is better)
Translates to: WVLDPRDLVSRW*ESGDPRKDLAG
Trigger: GCCTGCCAGATCTTTTCTCGGATCCCCGCTCTCCCACCACCTGCTCACGAGATCCCGCGGATCTAGAACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000593363.1
ENST00000595515.5
CDS CCA 72 bp CCCTGGGTTCTAGATCCGCGGGATCTCGTGAGCAGGTaGTGGGAGAGCGGGGATCCGAGAAAAGATCTGGCA +
Preference number: 6 (lower is better)
Translates to: PWVLDPRDLVSR*WESGDPRKDLA
Trigger: TGCCAGATCTTTTCTCGGATCCCCGCTCTCCCACCACCTGCTCACGAGATCCCGCGGATCTAGAACCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000593363.1
ENST00000595515.5
CDS CCA 72 bp ACGAACTCGCGGGTCAGCCCGATGAGTCGCAGAAGTTaGAGAAAAGTTCGGTCGGGAGCCGTGAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: TNSRVSPMSRRS*RKVRSGAVRKG
Trigger: CCCCTTCCTCACGGCTCCCGACCGAACTTTTCTCCAACTTCTGCGACTCATCGGGCTGACCCGCGAGTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598633.1
CDS CAA 72 bp GTGGCATTGGCAGTGACGATCTCAAAGCAGTGTGGGTaGGTGCCCGGCGGCACAAGGCTGAAGTTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: VALAVTISKQCG*VPGGTRLKFWA
Trigger: CGCCCAGAACTTCAGCCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGAGATCGTCACTGCCAATGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS CAA 72 bp CACGAACTCGCGGGTCAGCCCGATGAGTCGCAGAAGTaGGAGAAAAGTTCGGTCGGGAGCCGTGAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: HELAGQPDESQK*EKSSVGSREEG
Trigger: CCCTTCCTCACGGCTCCCGACCGAACTTTTCTCCAACTTCTGCGACTCATCGGGCTGACCCGCGAGTTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000598633.1
CDS CAA 90 bp CCAGGGATGACACCGGAGTCCTCTGACTCATCCATGAGGGCGCTCTaGTCAGCCTCGCTGAAATCGGTGGCCTCCTCCATCGGCACATCT +
Preference number: 6 (lower is better)
Translates to: PGMTPESSDSSMRAL*SASLKSVASSIGTS
Trigger: AGATGTGCCGATGGAGGAGGCCACCGATTTCAGCGAGGCTGACAAGAGCGCCCTCATGGATGAGTCAGAGGACTCCGGTGTCATCCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601605.5
ENST00000601806.5
CDS TCA 72 bp AGTCTTTGCATTGCAGGCCCTGCCGGAAGAGGCCCTTaGGGAGTTTCTTGCAAGCCTGGCAAACGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: SLCIAGPAGRGP*GVSCKPGKRWA
Trigger: GGCCCACCGTTTGCCAGGCTTGCAAGAAACTCCTCAAGGGCCTCTTCCGGCAGGGCCTGCAATGCAAAGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS GCA 72 bp TGCTGTAATGAACCACCCAACCCTCCCGCAGCGTGGTaGTGGATTTCCGCGTCGTGTGTCGCACCGATTGCA +
Preference number: 6 (lower is better)
Translates to: CCNEPPNPPAAW*WISASCVAPIA
Trigger: TGCAATCGGTGCGACACACGACGCGGAAATCCAGCACCACGCTGCGGGAGGGTTGGGTGGTTCATTACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS CCA 72 bp TGTAATGAACCACCCAACCCTCCCGCAGCGTGGTGCTaGATTTCCGCGTCGTGTGTCGCACCGATTGCACCA +
Preference number: 6 (lower is better)
Translates to: CNEPPNPPAAWC*ISASCVAPIAP
Trigger: TGGTGCAATCGGTGCGACACACGACGCGGAAATCCAGCACCACGCTGCGGGAGGGTTGGGTGGTTCATTACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS CAA 72 bp ACACCGGAGTCCTCTGACTCATCCATGAGGGCGCTCTaGTCAGCCTCGCTGAAATCGGTGGCCTCCTCCATC +
Preference number: 6 (lower is better)
Translates to: TPESSDSSMRAL*SASLKSVASSI
Trigger: GATGGAGGAGGCCACCGATTTCAGCGAGGCTGACAAGAGCGCCCTCATGGATGAGTCAGAGGACTCCGGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601605.5
ENST00000601806.5
CDS CAA 72 bp CGGAGCTGGCTCTCCTGCTTGGTAGGGAAGCGCAGTTaGTCAATGACCTTAACTGCCACGTCCCGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: RSWLSCLVGKRS*SMTLTATSRPV
Trigger: GACAGGCCGGGACGTGGCAGTTAAGGTCATTGACAAACTGCGCTTCCCTACCAAGCAGGAGAGCCAGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597390.5
ENST00000597589.5
ENST00000599019.5
ENST00000599464.1
ENST00000600194.5
ENST00000601806.5
CDS CCA 72 bp CGTAGAAGCCACACTCAGGGAACTTCTGGTCCACGATaGAACAGGCCAGCTGCTTCACATGAGCCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: RRSHTQGTSGPR*NRPAASHEPAR
Trigger: CCGAGCTGGCTCATGTGAAGCAGCTGGCCTGTTCCATCGTGGACCAGAAGTTCCCTGAGTGTGGCTTCTACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000598633.1
ENST00000601806.5
CDS CCA 72 bp TGTTGCTGTAATGAACCACCCAACCCTCCCGCAGCGTaGTGCTGGATTTCCGCGTCGTGTGTCGCACCGATT +
Preference number: 6 (lower is better)
Translates to: CCCNEPPNPPAA*CWISASCVAPI
Trigger: AATCGGTGCGACACACGACGCGGAAATCCAGCACCACGCTGCGGGAGGGTTGGGTGGTTCATTACAGCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS CCA 72 bp GTAGGTGGCATTGGCAGTGACGATCTCAAAGCAGTGTaGGTTGGTGCCCGGCGGCACAAGGCTGAAGTTCTG +
Preference number: 6 (lower is better)
Translates to: VGGIGSDDLKAV*VGARRHKAEVL
Trigger: CAGAACTTCAGCCTTGTGCCGCCGGGCACCAACCCACACTGCTTTGAGATCGTCACTGCCAATGCCACCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS CAA 90 bp ACTTCATTCCGGAGCTGGCTCTCCTGCTTGGTAGGGAAGCGCAGTTaGTCAATGACCTTAACTGCCACGTCCCGGCCTGTCTTCCGGTGT +
Preference number: 6 (lower is better)
Translates to: TSFRSWLSCLVGKRS*SMTLTATSRPVFRC
Trigger: ACACCGGAAGACAGGCCGGGACGTGGCAGTTAAGGTCATTGACAAACTGCGCTTCCCTACCAAGCAGGAGAGCCAGCTCCGGAATGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597390.5
ENST00000597589.5
ENST00000599019.5
ENST00000599464.1
ENST00000600194.5
ENST00000601806.5
CDS TCA 72 bp CAGCCACCTGTGAGAACCATGATTCCTTTCCACACCTaGAGTCTGGATGTGGCCGGGCACGATGGCTCATGC +
Preference number: 6 (lower is better)
Translates to: QPPVRTMIPFHT*SLDVAGHDGSC
Trigger: GCATGAGCCATCGTGCCCGGCCACATCCAGACTTCAGGTGTGGAAAGGAATCATGGTTCTCACAGGTGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593492.1
CDS TCA 72 bp AGGCAGTCATTAGGGACGCGGGTGGCGCAGCGTTTGTaGCAGTTAAACTTGCAGTCATCGCACTTGAGGCCC +
Preference number: 6 (lower is better)
Translates to: RQSLGTRVAQRL*QLNLQSSHLRP
Trigger: GGGCCTCAAGTGCGATGACTGCAAGTTTAACTGTCACAAACGCTGCGCCACCCGCGTCCCTAATGACTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000601605.5
CDS CCA 72 bp GAGTGGGTAGAAGGGAATCTCACGAGTCGCAGAAGTTaGAGAAAAGTTCGGTCGGGAGCCGTGAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: EWVEGNLTSRRS*RKVRSGAVRKG
Trigger: CCCCTTCCTCACGGCTCCCGACCGAACTTTTCTCCAACTTCTGCGACTCGTGAGATTCCCTTCTACCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000593363.1
CDS CAA 72 bp GGAGTGGGTAGAAGGGAATCTCACGAGTCGCAGAAGTaGGAGAAAAGTTCGGTCGGGAGCCGTGAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: GVGRRESHESQK*EKSSVGSREEG
Trigger: CCCTTCCTCACGGCTCCCGACCGAACTTTTCTCCAACTTCTGCGACTCGTGAGATTCCCTTCTACCCACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000593363.1
CDS CAA 72 bp GGGATTACTGGCCTCCCCCACTGTGCCCAGCCAGATTaGAGTTGCCTAGCCAGCCCACACAATTCTGTAAGC +
Preference number: 6 (lower is better)
Translates to: GITGLPHCAQPD*SCLASPHNSVS
Trigger: GCTTACAGAATTGTGTGGGCTGGCTAGGCAACTCAAATCTGGCTGGGCACAGTGGGGGAGGCCAGTAATCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597088.1
CDS TCA 72 bp AGGCAGTCATTAGGGACGCGGGTGGCGCAGCGTTTGTaGCAGTTAAACTTGCAGTCTTTGCATTGCAGGCCC +
Preference number: 6 (lower is better)
Translates to: RQSLGTRVAQRL*QLNLQSLHCRP
Trigger: GGGCCTGCAATGCAAAGACTGCAAGTTTAACTGTCACAAACGCTGCGCCACCCGCGTCCCTAATGACTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000600194.5
ENST00000601806.5
CDS TCA 72 bp TGGGCCAGGGTAAAGGGAACACAGCAACGATGGCTCTaGGACCCACAGAGATGTCTCAGAAGAAGGCAAGGC +
Preference number: 6 (lower is better)
Translates to: WARVKGTQQRWL*DPQRCLRRRQG
Trigger: GCCTTGCCTTCTTCTGAGACATCTCTGTGGGTCTCAGAGCCATCGTTGCTGTGTTCCCTTTACCCTGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593492.1
CDS GCA 72 bp CCACATTCTCTTGGATCTGACTGTTGGACACAGAGATaGTCAGAGAAGCTTGTCTGTGGGGCGCGTGGCCTG +
Preference number: 6 (lower is better)
Translates to: PHSLGSDCWTQR*SEKLVCGARGL
Trigger: CAGGCCACGCGCCCCACAGACAAGCTTCTCTGAGCATCTCTGTGTCCAACAGTCAGATCCAAGAGAATGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS CAA 72 bp CAGGCGCCAATAGTGCCGCTTTCTCTGCAGAGATGTTaGAAGAGTCACGTGAACCGCCAGACTTTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: QAPIVPLSLQRC*KSHVNRQTFLP
Trigger: GGGCAGGAAAGTCTGGCGGTTCACGTGACTCTTCAAACATCTCTGCAGAGAAAGCGGCACTATTGGCGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597589.5
ENST00000599019.5
CDS CAA 90 bp CTTGCAGTCCAGGCGCCAATAGTGCCGCTTTCTCTGCAGAGATGTTaGAAGAGTCACGTGAACCGCCAGACTTTCCTGCCCAGTCCCTAT +
Preference number: 6 (lower is better)
Translates to: LAVQAPIVPLSLQRC*KSHVNRQTFLPSPY
Trigger: ATAGGGACTGGGCAGGAAAGTCTGGCGGTTCACGTGACTCTTCAAACATCTCTGCAGAGAAAGCGGCACTATTGGCGCCTGGACTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000597589.5
ENST00000599019.5
CDS CAA 72 bp TACTGGCCTCCCCCACTGTGCCCAGCCAGATTTGAGTaGCCTAGCCAGCCCACACAATTCTGTAAGCTGATT +
Preference number: 6 (lower is better)
Translates to: YWPPPLCPARFE*PSQPTQFCKLI
Trigger: AATCAGCTTACAGAATTGTGTGGGCTGGCTAGGCAACTCAAATCTGGCTGGGCACAGTGGGGGAGGCCAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597088.1
CDS CAA 90 bp TGCTGGGATTACTGGCCTCCCCCACTGTGCCCAGCCAGATTTGAGTaGCCTAGCCAGCCCACACAATTCTGTAAGCTGATTCCTTGCATA +
Preference number: 6 (lower is better)
Translates to: CWDYWPPPLCPARFE*PSQPTQFCKLIPCI
Trigger: TATGCAAGGAATCAGCTTACAGAATTGTGTGGGCTGGCTAGGCAACTCAAATCTGGCTGGGCACAGTGGGGGAGGCCAGTAATCCCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000597088.1
CDS TCA 72 bp GAGATGAAGGCCAGAAAGAGAAACCCCCTCAGCTGCTaGAAGCAGCCACCTGTGAGAACCATGATTCCTTTC +
Preference number: 6 (lower is better)
Translates to: EMKARKRNPLSC*KQPPVRTMIPF
Trigger: GAAAGGAATCATGGTTCTCACAGGTGGCTGCTTTCAGCAGCTGAGGGGGTTTCTCTTTCTGGCCTTCATCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000593492.1
CDS TCA 72 bp GCTGAAGTTCTGGGCGGACTCCACCGTGAGGATTTCTaGCAGCGGAATTTCCTTATAGTATCTGTTGGTCGT +
Preference number: 6 (lower is better)
Translates to: AEVLGGLHREDF*QRNFLIVSVGR
Trigger: ACGACCAACAGATACTATAAGGAAATTCCGCTGTCAGAAATCCTCACGGTGGAGTCCGCCCAGAACTTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS CCA 72 bp CAGTGGCAATGTCCACATTCTCTTGGATCTGACTGTTaGACACAGAGATGCTCAGAGAAGCTTGTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: QWQCPHSLGSDC*TQRCSEKLVCG
Trigger: CCCACAGACAAGCTTCTCTGAGCATCTCTGTGTCCAACAGTCAGATCCAAGAGAATGTGGACATTGCCACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000291281.9
ENST00000433867.5
ENST00000595515.5
ENST00000597589.5
ENST00000599019.5
ENST00000600194.5
ENST00000601806.5
CDS TCA 72 bp TCTCAATATATATCTCCTCCTGGATGTTTCTCTGCTTaGTCCCTAACTGATAGAGGCCCCACCCTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: SQYISPPGCFSA*SLTDRGPTLFP
Trigger: GGGGAAGAGGGTGGGGCCTCTATCAGTTAGGGATCAAGCAGAGAAACATCCAGGAGGAGATATATATTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000597088.1