RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKCZ (Homo sapiens)

Ensembl gene IDs: ENSG00000067606

Ensembl transcript IDs: ENST00000378567.8, ENST00000400921.6, ENST00000419838.6, ENST00000461106.6, ENST00000461465.5, ENST00000466352.5, ENST00000466651.5, ENST00000468310.5, ENST00000470511.5, ENST00000470596.5, ENST00000470986.5, ENST00000471018.6, ENST00000472017.1, ENST00000478770.6, ENST00000479263.5, ENST00000479566.5, ENST00000481140.5, ENST00000482686.5, ENST00000484419.1, ENST00000486681.5, ENST00000495347.5, ENST00000496325.5, ENST00000497183.5, ENST00000503297.1, ENST00000503672.1, ENST00000505322.5

Found 537 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTaGCGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGGCC +
Preference number: 1 (lower is better)
Translates to: PGPGVRDCSAPSSAR*RFPLRSRRKRLSLA
Trigger: GGCCAGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR GCA 90 bp CAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTaGTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCG +
Preference number: 1 (lower is better)
Translates to: QHEAGLPGPRCEGLF*SQQRPLTLPSAVSA
Trigger: CGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR GCA 90 bp CGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTaGCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCAGCAGCGCC +
Preference number: 1 (lower is better)
Translates to: RDAGTAASSSSTKLA*PGPGVRDCSAPSSA
Trigger: GGCGCTGCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR TCA 90 bp CAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTaGGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTC +
Preference number: 1 (lower is better)
Translates to: QQVPPARSWPARAQV*GTVLLPAAPADASL
Trigger: GAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR CCA 90 bp GTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGC +
Preference number: 1 (lower is better)
Translates to: VKVVQTVVVCDLWLE*RERLLLLQLWCAHS
Trigger: GCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR GCA 90 bp TTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTaGATCGAGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCG +
Preference number: 1 (lower is better)
Translates to: FLRTLHAHFPGGAGQ*IEFCFRGKCAPWKP
Trigger: CGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR CCA 90 bp GAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTaGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGT +
Preference number: 1 (lower is better)
Translates to: ELCVKVVQTVVVCDL*LEWRERLLLLQLWC
Trigger: ACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR CCA 90 bp TGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCATGACAGAATCCATATGCTTCCTGCA +
Preference number: 1 (lower is better)
Translates to: CLLGRKVGVLVLVVY*RLLGRHDRIHMLPA
Trigger: TGCAGGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR TCA 90 bp GCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTaGTATACTCAAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTA +
Preference number: 1 (lower is better)
Translates to: ARGLTPTPRWTAIMG*YTQSLRTLTGRSSL
Trigger: TAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTGAGTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR TCA 90 bp CGCCCGATGACTCTGATTAGGTCAAAGTCCTGCAGCCCAAGCCCCTaGGAGATTTTGATTCCATCCATCCCATCGATAACTGGCTTAAGG +
Preference number: 1 (lower is better)
Translates to: RPMTLIRSKSCSPSP*EILIPSIPSITGLR
Trigger: CCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCAGGACTTTGACCTAATCAGAGTCATCGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR CCA 90 bp TCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTaGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAAATG +
Preference number: 1 (lower is better)
Translates to: SSEHFIPQDATRSLS*RSRSVHRVLFPWKM
Trigger: CATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTCCGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR GCA 90 bp GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCGCTGACGCTTCCCTCTaGGGTCTCGGCGCAAGCGTC +
Preference number: 2 (lower is better)
Translates to: VHLGNRMTAPSAGSPRIRADASL*GLGASV
Trigger: GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGC...GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR CCA 90 bp CACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACGTCGTCTGTGATCTGTaGCTGGAATGGAGGGAGCGC +
Preference number: 2 (lower is better)
Translates to: HACPRQRRTRPHTDSSVDVVCDL*LEWRER
Trigger: GCGCTCCCTCCATTCCAGCCACAGATCACAGACGAC...GTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR-3UTR CCA 90 bp ACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGCCTCCAGCACGAAGCTaGCCTGCCCGGGCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: TRSLSWRSRSVHRVLFPWPPARS*PARAQV
Trigger: CACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGG...CCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR CCA 90 bp TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGCCTCCAGCACGAAGCTaGCCTGCCCGGGCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: CFRGKCAPWKPHDSPLGRPPARS*PARAQV
Trigger: CACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGG...CCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR TCA 90 bp ACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCCCAGCAGCGCCCGCTaGCGCTTCCCTCTGCGGTCT +
Preference number: 2 (lower is better)
Translates to: TLHAHFPGGAGQCIEFCFPSSAR*RFPLRS
Trigger: AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGG...GAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR TCA 90 bp ACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAACCCAGCAGCGCCCGCTaGCGCTTCCCTCTGCGGTCT +
Preference number: 2 (lower is better)
Translates to: TLTFLAEQVSASSSVSVEPSSAR*RFPLRS
Trigger: AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGG...TTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR CCA 90 bp GGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGCACAGCAGGATTGTaGGGACACAAGATGCCCCCT +
Preference number: 2 (lower is better)
Translates to: GSITRVHDRDARGLTPTPRTAGL*GHKMPP
Trigger: AGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCG...AGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR-3UTR CCA 90 bp CTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTGGAGGCTCTTGGGAAGCGGGACGAGGCCGTaGCAGCGCTTATGGACCAGC +
Preference number: 2 (lower is better)
Translates to: LGRKVGVLVLVVYWRLLGSGTRP*QRLWTS
Trigger: GCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCT...TCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR-3UTR GCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTGCTGACGCTTCCCTCTaGGGTCTCGGCGCAAGCGTC +
Preference number: 2 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCADASL*GLGASV
Trigger: GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGC...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR GCA 90 bp CTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTGAGGGACTGTTCTaGTCCCAGCAGCGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: LRTLHAHFPGGAGQCIEFCEGLF*SQQRPL
Trigger: CAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA...GAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR TCA 90 bp TTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATACCTTGGAAACCGCATaGCAGCCCCCTCGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: FIPQDATRSLSWRSRSVHTLETA*QPPRQG
Trigger: ACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGT...ATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR GCA 90 bp GCATCGAGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCTGTGAGGGACTGTTCTaGTCCCAGCAGCGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: ASSSVSVENVHLGNRMTACEGLF*SQQRPL
Trigger: CAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA...GGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACTCGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR CCA 90 bp CAGTTAAAGGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCTTCTTCTCCAGCTGTaGTGTGCGCACAGCAGGATT +
Preference number: 2 (lower is better)
Translates to: QLKGQSRVSTTETHAASHLLLQL*CAHSRI
Trigger: AATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAG...GTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCCTTTAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR-3UTR GCA 90 bp CGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTGGAGGCTCTTGGGAAGATGACAGAATCCATATaGTTCCTGCAGGTCAGCGGG +
Preference number: 2 (lower is better)
Translates to: RKEGRRPRSCRLLEALGKMTESI*FLQVSG
Trigger: CCCGCTGACCTGCAGGAAGCATATGGATTCTGTCAT...CTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR-3UTR CCA 90 bp ACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCGGAAAATGTGCACCTTaGAAACCGCATGACAGCCCC +
Preference number: 2 (lower is better)
Translates to: TLHAHFPGGAGQCIEFCFGKCAP*KPHDSP
Trigger: GGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCC...GAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR CAA 90 bp GCAATTCCATCTGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTaGTCGTCTACTGGAGGCTCTTGGGAAGGCATGACAGAATCCATA +
Preference number: 2 (lower is better)
Translates to: AIPSVSSEGRSASSF*SSTGGSWEGMTESI
Trigger: TATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR-3UTR GCA 90 bp ATTCCATCCATCCCATCGATAACTGGCTTAAGGTCCTCCGAGTCGTCTTTAATGCCCATATCCTCTCGCTaGACTGACCGCAGTACGCTC +
Preference number: 2 (lower is better)
Translates to: IPSIPSITGLRSSESSLMPISSR*TDRSTL
Trigger: GAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGG...CATTAAAGACGACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR-3UTR GCA 90 bp TTTGGTCATTCTTCTTCAACCGCACCAGGAGAACCTTGGCGTAGCTCCCGCGCCTCTTTAATGCTGTCATaGTTCCGGGATGAGGAAATG +
Preference number: 2 (lower is better)
Translates to: FGHSSSTAPGEPWRSSRASLMLS*FRDEEM
Trigger: CATTTCCTCATCCCGGAAGCATGACAGCATTAAAGA...GGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR-3UTR CCA 90 bp TCAAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCTCATCGTCTGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTT +
Preference number: 2 (lower is better)
Translates to: SKPSNSDWSILFMASSSSDLWLE*RERLLL
Trigger: AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATC...AGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR-3UTR CCA 90 bp GATTTTGATTCCATCCATCCCATCGATAACTGGCTTAAGGTCCTCCGAGTCGTCCCGTGGCAGCGCTTATaGACCAGCAGTTTGCAGTTG +
Preference number: 2 (lower is better)
Translates to: DFDSIHPIDNWLKVLRVVPWQRL*TSSLQL
Trigger: CAACTGCAAACTGCTGGTCCATAAGCGCTGCCACGG...GACGACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR GCA 72 bp GTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTaGGGTCTCGGCGCAAGCGTCTGTCCCTGGCCGCCC +
Preference number: 3 (lower is better)
Translates to: VLLPAAPADASL*GLGASVCPWPP
Trigger: GGGCGGCCAGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
3UTR GCA 72 bp GCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTaGTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCG +
Preference number: 3 (lower is better)
Translates to: AGLPGPRCEGLF*SQQRPLTLPSA
Trigger: CGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR GCA 72 bp GGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTaGCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCC +
Preference number: 3 (lower is better)
Translates to: GTAASSSSTKLA*PGPGVRDCSAP
Trigger: GGGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR-3UTR CAA 90 bp GATCCTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGTGCGCACAGCAGGATaGTGGGGACACAAGATGCCC +
Preference number: 3 (lower is better)
Translates to: DPLYGILIVWGQLHGLAGVRTAG*WGHKMP
Trigger: GGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCAC...ACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR CCA 72 bp GTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGT +
Preference number: 3 (lower is better)
Translates to: VQTVVVCDLWLE*RERLLLLQLWC
Trigger: ACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR CCA 72 bp GTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTaGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: VKVVQTVVVCDL*LEWRERLLLLQ
Trigger: CTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR GCA 72 bp ACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTaGATCGAGTTCTGTTTCCGTGGAAAATGTGCACCT +
Preference number: 3 (lower is better)
Translates to: TLHAHFPGGAGQ*IEFCFRGKCAP
Trigger: AGGTGCACATTTTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR GCA 72 bp ATCCTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTaGACGGGCTCGCTGGTGAACTGTGTGTCAAAGTTG +
Preference number: 3 (lower is better)
Translates to: ILFMASSSSGVS*TGSLVNCVSKL
Trigger: CAACTTTGACACACAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR CCA 72 bp TCGGCGTCCTCGTTCTTGTCGTCTACTGGAGGCTCTTaGGAAGGCATGACAGAATCCATATGCTTCCTGCAG +
Preference number: 3 (lower is better)
Translates to: SASSFLSSTGGS*EGMTESICFLQ
Trigger: CTGCAGGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR CCA 72 bp GGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCATGACAGAATCCATATG +
Preference number: 3 (lower is better)
Translates to: GRKVGVLVLVVY*RLLGRHDRIHM
Trigger: CATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR-3UTR CAA 90 bp GATTTTGATTCCATCCATCCCATCGATAACTGGCTTAAGGTCCTCCGAGTCGTCGATGCACCTGTAGCCTaGCCTCGCGAGGCCCCATAT +
Preference number: 3 (lower is better)
Translates to: DFDSIHPIDNWLKVLRVVDAPVA*PREAPY
Trigger: ATATGGGGCCTCGCGAGGCAAGGCTACAGGTGCATC...GACGACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAATCAAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481140.5
3UTR CCA 72 bp CATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTaGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCG +
Preference number: 3 (lower is better)
Translates to: HFIPQDATRSLS*RSRSVHRVLFP
Trigger: CGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR TCA 72 bp CTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTaGTATACTCAAAGCCTTCGAACTCTGACTGGTCGA +
Preference number: 3 (lower is better)
Translates to: LTPTPRWTAIMG*YTQSLRTLTGR
Trigger: TCGACCAGTCAGAGTTCGAAGGCTTTGAGTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR TCA 72 bp ACTCTGATTAGGTCAAAGTCCTGCAGCCCAAGCCCCTaGGAGATTTTGATTCCATCCATCCCATCGATAACT +
Preference number: 3 (lower is better)
Translates to: TLIRSKSCSPSP*EILIPSIPSIT
Trigger: AGTTATCGATGGGATGGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCAGGACTTTGACCTAATCAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp GACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCGTCTCCAGGCCCGGGTaGTACCCGGCTCCCCCGGGA +
Preference number: 4 (lower is better)
Translates to: DSPLGRVPADPPRRRHSSVSRPG*YPAPPG
Trigger: TCCCGGGGGAGCCGGGTACCACCCGGGCCTGGAGAC...GCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR CCA 90 bp GCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTCCTCCAGCACGAAGCTaGCCTGCCCGGGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: APSAGSPRIRRDAGTAASPPARS*PARAQV
Trigger: CACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGG...ACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAACGGCCGCGTAGAACCTaGCGTGCTCCTCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: QPPRQGPRGSAATQAQQQRPRRT*RAPQGA
Trigger: AGCTCCCTGAGGAGCACGCCAGGTTCTACGCGGCCG...TTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGCCTTCCCCGGGCCGTaGCACCAGCCGTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPAFPGP*HQPCCC
Trigger: GCAGCAACACGGCTGGTGCCACGGCCCGGGGAAGGC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR TCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCAGCAGCGCCCGCTaGCGCTTCCCTCTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCPSSAR*RFPLRS
Trigger: AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGG...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp GACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCTCTCGTGCAGGAAGTTaGGGGCGATGCAGATCTCGG +
Preference number: 4 (lower is better)
Translates to: DSPLGRVPADPPRRRHSSSRAGS*GRCRSR
Trigger: CCGAGATCTGCATCGCCCTCAACTTCCTGCACGAGA...GCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp GCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTTGAGGGTGAGCGGGTaGTGCTGGTGCAGACGACAC +
Preference number: 4 (lower is better)
Translates to: APSAGSPRIRRDAGTAASLRVSG*CWCRRH
Trigger: GTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAA...ACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR GCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGCCCGGAGCATCTGTaGAGCGCACAGGCAGCGGCA +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPCPEHL*SAQAAA
Trigger: TGCCGCTGCCTGTGCGCTGCACAGATGCTCCGGGCA...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR GCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCATTGCTGGGAGCTGCTaGAGCCGCACGCCTTCCCCG +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPIAGSC*SRTPSP
Trigger: CGGGGAAGGCGTGCGGCTGCAGCAGCTCCCAGCAAT...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR CCA 90 bp CGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACCAGGAGAACCTTaGCGTAGCTCCCGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: RQGPRGSAATQAQQQVPPAPGEP*RSSRAR
Trigger: TCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGC...TGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp GCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTCTCTGCCTCTGCATGTaGAACATCAGGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: APSAGSPRIRRDAGTAASLCLCM*NIRSPP
Trigger: CGGCGGGGACCTGATGTTCCACATGCAGAGGCAGAG...ACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp GACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCGTCGTCTGTGATCTGTaGCTGGAATGGAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: DSPLGRVPADPPRRRHSSVVCDL*LEWRER
Trigger: GCGCTCCCTCCATTCCAGCCACAGATCACAGACGAC...GCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCTCGTGCAGGAAGTTaGGGGCGATGCAGATCTCGG +
Preference number: 4 (lower is better)
Translates to: APSAGSPRIRRDAGTAASSRAGS*GRCRSR
Trigger: CCGAGATCTGCATCGCCCTCAACTTCCTGCACGAGA...ACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTTCTTGGGGCCGGTCCTaGTGGGCATGGCGCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GSAATQAQQQVPPARSWPSWGRS*WAWRAP
Trigger: GGGAGCGCGCCATGCCCAGCAGGACCGGCCCCAAGA...AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR GCA 90 bp CAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAACCCATATCCTCTCGCTaGACTGACCGCAGTACGCTC +
Preference number: 4 (lower is better)
Translates to: QPPRQGPRGSAATQAQQQPISSR*TDRSTL
Trigger: GAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGG...TTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGCTGACGCTTCCCTCTaGGGTCTCGGCGCAAGCGTC +
Preference number: 4 (lower is better)
Translates to: RVPADPPRRRHSSKFLQHADASL*GLGASV
Trigger: GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGC...GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCGCTGACGCTTCCCTCTaGGGTCTCGGCGCAAGCGTC +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVADASL*GLGASV
Trigger: GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGC...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGACATTGCTGGGAGCTaGTGCAGCCGCACGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPDIAGS*CSRTPS
Trigger: GGAAGGCGTGCGGCTGCAGCAGCTCCCAGCAATGTC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR CCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCGCACCAGGAGAACCTTaGCGTAGCTCCCGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVAPGEP*RSSRAR
Trigger: TCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGC...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp GCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTACCGGGGGATCCGGATaGGCTTCTCCAGGATCACTT +
Preference number: 4 (lower is better)
Translates to: APSAGSPRIRRDAGTAASTGGSG*ASPGSL
Trigger: AAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGT...ACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp GATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCTCCAGCACGAAGCTaGCCTGCCCGGGCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DPPRRRHSSKFLQHEAGLPPARS*PARAQV
Trigger: CACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGG...CAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCTTCCCGTTGACGAGCTaGTGCTGCGTCGGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: VHLGNRMTAPSAGSPRIRFPLTS*CCVGSP
Trigger: AGGCGAGCCGACGCAGCATCAGCTCGTCAACGGGAA...GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR GCA 90 bp GACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCGGGTTGCTGGATGCCTaGTCAAACACGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DSPLGRVPADPPRRRHSSGLLDA*SNTCFS
Trigger: AGAGAAGCACGTGTTTGAGCAGGCATCCAGCAACCC...GCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTTCGTCTGGGGTCAGCTaGACGGGCTCGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCSSGVS*TGSLVN
Trigger: GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGA...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTTGTGAGGGACTGTTCTaGTCCCAGCAGCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPCEGLF*SQQRPL
Trigger: CAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCACCAGCCGTGTTGCTaGCCGGAGCATCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCHQPCC*PEHLCS
Trigger: GCTGCACAGATGCTCCGGGCAGCAACACGGCTGGTG...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR GCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTTGGCACCAGCCGTGTTaGTGCCCGGAGCATCTGTGC +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPWHQPC*CPEHLC
Trigger: GCACAGATGCTCCGGGCAGCAACACGGCTGGTGCCA...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR CCA 90 bp GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCGTCTTCTCCCGGACATaGCAGGCCAGGCTGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VHLGNRMTAPSAGSPRIRVFSRT*QARLLR
Trigger: CCTGAGCAGCCTGGCCTGCCATGTCCGGGAGAAGAC...GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR CCA 90 bp CTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCAGCGGGACGAGGCCGTaGCAGCGCTTATGGACCAGC +
Preference number: 4 (lower is better)
Translates to: LQHEAGLPGPRCEGLFCSSGTRP*QRLWTS
Trigger: GCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCT...GGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTATCCTCTCGCTGCACTaGCCGCAGTACGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCILSLH*PQYALL
Trigger: CAGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGAT...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCACCTTGGAAACCGCATaGCAGCCCCCTCGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RIRRDAGTAASSSSTKLATLETA*QPPRQG
Trigger: ACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGT...GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCTCAGACCCAAAATGCTaGCTCGGGCACCGTCCTCCG +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVSDPKC*LGHRPP
Trigger: CGGAGGACGGTGCCCGAGTCAGCATTTTGGGTCTGA...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR TCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCCATCCGTCCTCGGGGTaGGCATGTCCCTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVHPSSG*ACPSSS
Trigger: GCTGCTGGAGGGACATGCTCACCCCGAGGACGGATG...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR GCA 90 bp CAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAATCAGGGAGCTTCCTCTaGCTCTGCATGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: QPPRQGPRGSAATQAQQQSGSFL*LCMWNI
Trigger: GATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGA...TTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGGGTTCCGCAGAAAGTaGTCGTTGTGTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPGFRRK*SLCHQG
Trigger: GCCCTGGTGACACAACGAGCACTTTCTGCGGAACCC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp CGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGGGTTCCGCAGAAAGTaGTCGTTGTGTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: RQGPRGSAATQAQQQVPPGFRRK*SLCHQG
Trigger: GCCCTGGTGACACAACGAGCACTTTCTGCGGAACCC...TGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCAGCGGGACGAGGCCGTaGCAGCGCTTATGGACCAGC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVSGTRP*QRLWTS
Trigger: GCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCT...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp GATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGGCACCAGGAGAACCTTaGCGTAGCTCCCGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: DPPRRRHSSKFLQHEAGLAPGEP*RSSRAR
Trigger: TCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGC...CAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCTCTGCCTCTGCATGTaGAACATCAGGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVLCLCM*NIRSPP
Trigger: CGGCGGGGACCTGATGTTCCACATGCAGAGGCAGAG...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTCGGCCGCGTAGAACCTaGCGTGCTCCTCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GSAATQAQQQVPPARSWPRPRRT*RAPQGA
Trigger: AGCTCCCTGAGGAGCACGCCAGGTTCTACGCGGCCG...AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCCGGCCGCGTAGAACCTaGCGTGCTCCTCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVRPRRT*RAPQGA
Trigger: AGCTCCCTGAGGAGCACGCCAGGTTCTACGCGGCCG...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAAGAAAATCCAGTCTGTaGCCGGCAGCCGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: RQGPRGSAATQAQQQVPPRKSSL*PAAEPL
Trigger: GAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCT...TGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCTCTGTGATCTGTGGCTaGAATGGAGGGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGRVPADPPRRRHSSKFLSVICG*NGGSAC
Trigger: GCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGA...GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGTCGTCTGTGATCTGTaGCTGGAATGGAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPVVCDL*LEWRER
Trigger: GCGCTCCCTCCATTCCAGCCACAGATCACAGACGAC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCGGCATCCTCATCGTCTaGGGTCAGCTGCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: LQHEAGLPGPRCEGLFCSGILIV*GQLHGL
Trigger: GAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCC...GGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCGTCATGCTTCCGGGATaGGGAAATGTAAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: DSPLGRVPADPPRRRHSSVMLPG*GNVSNS
Trigger: GGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC...GCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCTCAGGTCCCTGTAGATaGTCCCCCTCTCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVSGPCR*SPSRAG
Trigger: TCCTGCACGAGAGGGGGATCATCTACAGGGACCTGA...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTAAACATGGGAGGCTTTaGCGGACAGGAACCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPKHGRL*RTGTGG
Trigger: TCCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTT...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGCACGGGCTCGCTGGTaGACTGTGTGTCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPARARW*TVCQSC
Trigger: ACAACTTTGACACACAGTTCACCAGCGAGCCCGTGC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCATCTTCCTTCCCGTTaGCGAGCTGATGCTGCGTCG +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVHLPSR*RADAAS
Trigger: CGACGCAGCATCAGCTCGTCAACGGGAAGGAAGATG...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR GCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCAATCCATATGCTTCCTaGAGGTCAGCGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPNPYAS*RSAGRG
Trigger: GCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATT...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCGCAAGTCCCAGTCTATaGTGCGGAAGAACGCGTGGG +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVASPSL*CGRTRG
Trigger: CCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGC...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCCGCCCCTCACATCCCTaGCTCCTCATGTCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVRPSHP*LLMSPG
Trigger: GCCTGGAGACATGAGGAGGCAGGGATGTGAGGGGCG...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR CCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTTTGGCTTGGAAGAGGTaGCCGTTGGCACGGTACAGC +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCLAWKR*PLARYS
Trigger: GCTGTACCGTGCCAACGGCCACCTCTTCCAAGCCAA...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCACCGTGGCAGCGCTTATaGACCAGCAGTTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RQGPRGSAATQAQQQVPPPWQRL*TSSLQL
Trigger: CAACTGCAAACTGCTGGTCCATAAGCGCTGCCACGG...TGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAACATCCCATCGATAACTaGCTTAAGGTCCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: QPPRQGPRGSAATQAQQQHPIDN*LKVLRV
Trigger: GACTCGGAGGACCTTAAGCCAGTTATCGATGGGATG...TTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCCCAGGAAGGGGTTGCTaGATGCCTGCTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPPGRGC*MPAQTR
Trigger: ACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGG...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCACCGGGGGATCCGGATaGGCTTCTCCAGGATCACTT +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVTGGSG*ASPGSL
Trigger: AAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGT...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCAGAAAATCCAGTCTGTaGCCGGCAGCCGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVRKSSL*PAAEPL
Trigger: GAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCT...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTTCTGTGATCTGTGGCTaGAATGGAGGGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPSVICG*NGGSAC
Trigger: GCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGA...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCGTCGTCTGTGATCTGTaGCTGGAATGGAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVVVCDL*LEWRER
Trigger: GCGCTCCCTCCATTCCAGCCACAGATCACAGACGAC...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp AGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGGCATCCTCATCGTCTaGGGTCAGCTGCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: RHSSKFLQHEAGLPGPRCGILIV*GQLHGL
Trigger: GAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCC...ACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCGGCATCCTCATCGTCTaGGGTCAGCTGCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVGILIV*GQLHGL
Trigger: GAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCC...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTATCCTCTCGCTGCACTaGCCGCAGTACGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSAATQAQQQVPPARSWPILSLH*PQYALL
Trigger: CAGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGAT...AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCTGCAGCCCAAGCCCCTaGGAGATTTTGATTCCATCC +
Preference number: 4 (lower is better)
Translates to: LGRVPADPPRRRHSSKFLCSPSP*EILIPS
Trigger: GGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCA...GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp TCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTCCCAGCAGCGCCCGCTaGCGCTTCCCTCTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: SSGRYTLTFLAEQVSASSPSSAR*RFPLRS
Trigger: AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGG...ACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGCCCAGCAGCGCCCGCTaGCGCTTCCCTCTGCGGTCT +
Preference number: 4 (lower is better)
Translates to: VSVENVHLGNRMTAPSAGPSSAR*RFPLRS
Trigger: AGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGG...CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCATGATCCCCCTCTCGTaGAGGAAGTTGAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVMIPLS*RKLRAM
Trigger: CATCGCCCTCAACTTCCTGCACGAGAGGGGGATCAT...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCAGTCCCAGTCTATGCTaGGGAAGAACGCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVSPSLC*GRTRGT
Trigger: AGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACT...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCAATGGAGGGAGCGCCTaGTTCTTCTCCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVNGGSA*FFSSKS
Trigger: GGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATT...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp CACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACCCAAGTCCCAGTCTATaGTGCGGAAGAACGCGTGGG +
Preference number: 4 (lower is better)
Translates to: HACPRQRRTRPHTDSSVDPSPSL*CGRTRG
Trigger: CCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGG...GTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTTGGCTTGGAAGAGGTaGCCGTTGGCACGGTACAGC +
Preference number: 4 (lower is better)
Translates to: RIRRDAGTAASSSSTKLALAWKR*PLARYS
Trigger: GCTGTACCGTGCCAACGGCCACCTCTTCCAAGCCAA...GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCGTGGCAGCGCTTATaGACCAGCAGTTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCPWQRL*TSSLQL
Trigger: CAACTGCAAACTGCTGGTCCATAAGCGCTGCCACGG...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp TTGCCTCGCGAGGCCCCATATCCTCTCGCTGCACTGACCGCAGTACGCTCTCCTGCACCAGGAGAACCTTaGCGTAGCTCCCGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: LPREAPYPLAALTAVRSPAPGEP*RSSRAR
Trigger: TCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGC...AGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGGGCCTCGCGAGGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp GGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCACGGCCGCGTAGAACCTaGCGTGCTCCTCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GWNGGSACFFSSCGVRTARPRRT*RAPQGA
Trigger: AGCTCCCTGAGGAGCACGCCAGGTTCTACGCGGCCG...TGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPDLWLE*RERLLL
Trigger: AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATC...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp TTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCCCCGTAATGCGCCTTaGGGCGGACGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FIPQDATRSLSWRSRSVHPRNAP*GGRGRR
Trigger: GCGGCGGCCGCGTCCGCCTCAAGGCGCATTACGGGG...ATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR TCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGCTCTTGGGAAGGCATaGCAGAATCCATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPALGKA*QNPYAS
Trigger: GGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTTGCAGCCCAAGCCCCTaGGAGATTTTGATTCCATCC +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCCSPSP*EILIPS
Trigger: GGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCA...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCTCGTGCAGGAAGTTaGGGGCGATGCAGATCTCGG +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVSRAGS*GRCRSR
Trigger: CCGAGATCTGCATCGCCCTCAACTTCCTGCACGAGA...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCACTGCGTTTCCCCTaGCATTGCTGGGAGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVSLRFP*HCWELL
Trigger: CAGCAGCTCCCAGCAATGTCAGGGGAAACGCAGTGA...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR GCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCCCCATATCCTCTCGCTaGACTGACCGCAGTACGCTC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVPISSR*TDRSTL
Trigger: GAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGG...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp GCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTATATCCTCGTCATCATaGACCAGCTCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: APSAGSPRIRRDAGTAASISSSS*TSSFFT
Trigger: GGTGAAGAAAGAGCTGGTGCATGATGACGAGGATAT...ACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCGAAGGGGTTGCTGGATaGCTGCTCAAACACGTGCTT +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVEGVAG*LLKHVL
Trigger: AAGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTC...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCAGCTTCCTCTGCCTCTaGATGTGGAACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVSFLCL*MWNIRS
Trigger: GGACCTGATGTTCCACATGCAGAGGCAGAGGAAGCT...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCTCAGGGAGCTTCCTCTaGCTCTGCATGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVSGSFL*LCMWNI
Trigger: GATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGA...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCGGGTTCCGCAGAAAGTaGTCGTTGTGTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVGFRRK*SLCHQG
Trigger: GCCCTGGTGACACAACGAGCACTTTCTGCGGAACCC...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCAATGGAGGGAGCGCCTaGTTCTTCTCCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: RIRRDAGTAASSSSTKLANGGSA*FFSSKS
Trigger: GGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATT...GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp AGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGTGAGCGGGTGCTGCTaGTGCAGACGACACATGTCT +
Preference number: 4 (lower is better)
Translates to: RHSSKFLQHEAGLPGPRCVSGCC*CRRHMS
Trigger: AGACATGTGTCGTCTGCACCAGCAGCACCCGCTCAC...ACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR CCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTTTAAAGCGCTTGGCTTaGAAGAGGTGGCCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCLKRLA*KRWPLA
Trigger: TGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAA...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp GAATCCATATGCTTCCTGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGGAGCGGGACGAGGCCGTaGCAGCGCTTATGGACCAGC +
Preference number: 4 (lower is better)
Translates to: ESICFLQVSGTRPWQRLWSGTRP*QRLWTS
Trigger: GCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCT...CCATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: LGRVPADPPRRRHSSKFLVLVVY*RLLGRH
Trigger: ATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAAC...GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCACCGGGGGATCCGGATaGGCTTCTCCAGGATCACTT +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVTGGSG*ASPGSL
Trigger: AAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGT...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCTGTGATCTGTGGCTaGAATGGAGGGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVSVICG*NGGSAC
Trigger: GCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGA...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp TCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGAGTCGTCTGTGATCTGTaGCTGGAATGGAGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SRVSTTETHAASHRLLGGVVCDL*LEWRER
Trigger: GCGCTCCCTCCATTCCAGCCACAGATCACAGACGAC...TCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCGGTCGATCCTCTTTATaGCATCCTCATCGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVGRSSL*HPHRLG
Trigger: CCCCAGACGATGAGGATGCCATAAAGAGGATCGACC...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCACACGCTCACTTTCCTaGCGGAGCAGGTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: LQHEAGLPGPRCEGLFCSTRSLS*RSRSVH
Trigger: ATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGT...GGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TTGCCTCGCGAGGCCCCATATCCTCTCGCTGCACTGACCGCAGTACGCTCTCCTCTTGAACAGCCGCTCTaGCAGCCCCCAGCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LPREAPYPLAALTAVRSPLEQPL*QPPAPA
Trigger: TGCAGGAGCTGGGGGCTGCCAGAGCGGCTGTTCAAG...AGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGGGCCTCGCGAGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR TCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTGCTCTTGGGAAGGCATaGCAGAATCCATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCALGKA*QNPYAS
Trigger: GGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGC...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTGCCCCTGAGAGATTTTaGTTCCATCCATCCCATCGA +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCAPERF*FHPSHR
Trigger: TCGATGGGATGGATGGAATCAAAATCTCTCAGGGGC...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp ATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCGACCGTAGTCGTCTGTaGTCTGTGGCTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: IRRDAGTAASSSSTKLACDRSRL*SVAGME
Trigger: CTCCATTCCAGCCACAGATCACAGACGACTACGGTC...GCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGAT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCGACCGTAGTCGTCTGTaGTCTGTGGCTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVDRSRL*SVAGME
Trigger: CTCCATTCCAGCCACAGATCACAGACGACTACGGTC...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCGCACGGGCTCGCTGGTaGACTGTGTGTCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVARARW*TVCQSC
Trigger: ACAACTTTGACACACAGTTCACCAGCGAGCCCGTGC...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp GATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGAATCCATATGCTTCCTaGAGGTCAGCGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: DPPRRRHSSKFLQHEAGLNPYAS*RSAGRG
Trigger: GCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATT...CAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTATGACAGAATCCATATaGTTCCTGCAGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCMTESI*FLQVSG
Trigger: CCCGCTGACCTGCAGGAAGCATATGGATTCTGTCAT...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp GATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGATGATCCCCCTCTCGTaGAGGAAGTTGAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: DPPRRRHSSKFLQHEAGLMIPLS*RKLRAM
Trigger: CATCGCCCTCAACTTCCTGCACGAGAGGGGGATCAT...CAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTAGTCCCAGTCTATGCTaGGGAAGAACGCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: GSAATQAQQQVPPARSWPSPSLC*GRTRGT
Trigger: AGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACT...AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCGCTGACGCTTCCCTCTaGGGTCTCGGCGCAAGCGTC +
Preference number: 4 (lower is better)
Translates to: LRTLHAHFPGGAGQCIEFADASL*GLGASV
Trigger: GACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGC...GAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp GATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGGGCGGAGCAGGTCAGTaGATCGAGTTCTGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: DPPRRRHSSKFLQHEAGLGGAGQ*IEFCFR
Trigger: ACGGAAACAGAACTCGATGCACTGACCTGCTCCGCC...CAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTACAACAGCCTCTCACTaGGTTTCCCCTGACATTGCT +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPTTASH*VSPDIA
Trigger: AGCAATGTCAGGGGAAACGCAGTGAGAGGCTGTTGT...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR GCA 90 bp AGAATCCATATGCTTCCTGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGGCAGCCCCCAGCTCCTaGACGTGTGATCGTGCCACG +
Preference number: 4 (lower is better)
Translates to: RIHMLPAGQRDEAVAALMAAPSS*TCDRAT
Trigger: CGTGGCACGATCACACGTGCAGGAGCTGGGGGCTGC...CATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTCCGTGGCAGCGCTTATaGACCAGCAGTTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: GSAATQAQQQVPPARSWPPWQRL*TSSLQL
Trigger: CAACTGCAAACTGCTGGTCCATAAGCGCTGCCACGG...AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCTCTACTGGAGGCTCTTaGGAAGGCATGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVSTGGS*EGMTES
Trigger: GGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGA...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPVLVVY*RLLGRH
Trigger: ATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAAC...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTCATCCCATCGATAACTaGCTTAAGGTCCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPHPIDN*LKVLRV
Trigger: GACTCGGAGGACCTTAAGCCAGTTATCGATGGGATG...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTAACCGACTTGTCGTCTaGAAGCAGGAGTGTAATCCG +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCNRLVV*KQECNP
Trigger: CGGATTACACTCCTGCTTCCAGACGACAAGTCGGTT...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp GGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTACCGGGGGATCCGGATaGGCTTCTCCAGGATCACTT +
Preference number: 4 (lower is better)
Translates to: GSITRVHDRDARGLTPTPTGGSG*ASPGSL
Trigger: AAGTGATCCTGGAGAAGCCCATCCGGATCCCCCGGT...AGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp CGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCACTGCGGAAGAACGCGTaGGACTTGATGTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RQGPRGSAATQAQQQVPPLRKNA*DLMSEN
Trigger: ATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAG...TGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCCTGCGGAAGAACGCGTaGGACTTGATGTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPLRKNA*DLMSEN
Trigger: ATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAG...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp TCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGAGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: SRVSTTETHAASHRLLGGDLWLE*RERLLL
Trigger: AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATC...TCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCACACGCTCACTTTCCTaGCGGAGCAGGTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVTRSLS*RSRSVH
Trigger: ATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGT...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCATCAGGTCCCTGTAGATaGTCCCCCTCTCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: GWNGGSACFFSSCGVRTASGPCR*SPSRAG
Trigger: TCCTGCACGAGAGGGGGATCATCTACAGGGACCTGA...TGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTAGAACGCGTGGGACTTaGTGTCAGAAAATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: LPAAPADASLCGLGASVCRTRGT*CQKIQS
Trigger: AGACTGGATTTTCTGACATCAAGTCCCACGCGTTCT...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp AGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCACGGGCTCGCTGGTaGACTGTGTGTCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSSSTKLACPGPGVRDCSARARW*TVCQSC
Trigger: ACAACTTTGACACACAGTTCACCAGCGAGCCCGTGC...AGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGACCTTGGAAACCGCATaGCAGCCCCCTCGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VSVENVHLGNRMTAPSAGTLETA*QPPRQG
Trigger: ACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGT...CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp TTGCCTCGCGAGGCCCCATATCCTCTCGCTGCACTGACCGCAGTACGCTCTCCTTTGCCAAGTCCATCTTaGACAGCCGCTCTGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPREAPYPLAALTAVRSPLPSPS*TAALAA
Trigger: GGCTGCCAGAGCGGCTGTTCAAGATGGACTTGGCAA...AGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGGGCCTCGCGAGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR TCA 90 bp GTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGCGGTACTGCAGGCCATaGCCTTTCCACCAAGTGCTT +
Preference number: 4 (lower is better)
Translates to: VNHACPRQRRTRPHTDSSRYCRP*PFHQVL
Trigger: AAGCACTTGGTGGAAAGGTCATGGCCTGCAGTACCG...CGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCATATCCTCGTCATCATaGACCAGCTCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPISSSS*TSSFFT
Trigger: GGTGAAGAAAGAGCTGGTGCATGATGACGAGGATAT...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCGGGTTGCTGGATGCCTaGTCAAACACGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVGLLDA*SNTCFS
Trigger: AGAGAAGCACGTGTTTGAGCAGGCATCCAGCAACCC...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp ATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCGAAGGGGTTGCTGGATaGCTGCTCAAACACGTGCTT +
Preference number: 4 (lower is better)
Translates to: IRRDAGTAASSSSTKLACEGVAG*LLKHVL
Trigger: AAGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTC...GCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp ACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGTGTGCGCGGCGGGCGTaGAGGGAGGCATCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TRSLSWRSRSVHRVLFPWCARRA*REASSF
Trigger: GAAGGAAGATGCCTCCCTGCACGCCCGCCGCGCACA...CCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR CCA 90 bp CACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: HACPRQRRTRPHTDSSVDVLVVY*RLLGRH
Trigger: ATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAAC...GTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp AGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATGCCCCCTTCATTCGCACCAGGAGAACCTTaGCGTAGCTCCCGCGCCCGA +
Preference number: 4 (lower is better)
Translates to: SCGVRTAGLWGHKMPPSFAPGEP*RSSRAR
Trigger: TCGGGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGC...GAATGAAGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp GGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACAGAAAATCCAGTCTGTaGCCGGCAGCCGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: GAPASSPAVVCAQQDCGDRKSSL*PAAEPL
Trigger: GAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCT...GTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCTGCGGAAGAACGCGTaGGACTTGATGTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVLRKNA*DLMSEN
Trigger: ATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAG...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp GATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGGGTCGATCCTCTTTATaGCATCCTCATCGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DPPRRRHSSKFLQHEAGLGRSSL*HPHRLG
Trigger: CCCCAGACGATGAGGATGCCATAAAGAGGATCGACC...CAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTCCTTCGAACTCTGACTaGTCGATCCTCTTTATGGCA +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPPSNSD*SILFMA
Trigger: TGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGG...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCCGAGTTCTGTTTCCGTaGAAAATGTGCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: PAAPADASLCGLGASVCPRVLFP*KMCTLE
Trigger: TTCCAAGGTGCACATTTTCCACGGAAACAGAACTCG...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp ATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCTTCTGCAGACGGAGGTaGCCACTCGGTACTGCAGGC +
Preference number: 4 (lower is better)
Translates to: ICGWNGGSACFFSSCGVRFCRRR*PLGTAG
Trigger: GCCTGCAGTACCGAGTGGCCACCTCCGTCTGCAGAA...GCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp GGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGCACGGGCTCGCTGGTaGACTGTGTGTCAAAGTTGT +
Preference number: 4 (lower is better)
Translates to: GWNGGSACFFSSCGVRTAARARW*TVCQSC
Trigger: ACAACTTTGACACACAGTTCACCAGCGAGCCCGTGC...TGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp ATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCGGACTCAGCGGACCTTaGAAATGCGACATCAGAACA +
Preference number: 4 (lower is better)
Translates to: IRRDAGTAASSSSTKLACGLSGP*KCDIRT
Trigger: TGTTCTGATGTCGCATTTTCAAGGTCCGCTGAGTCC...GCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR TCA 90 bp AGCAATTCCATCTGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCCAGCTCCTGCACGTGTaGTCGTGCCACGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SNSICLLGRKVGVLVLVVQLLHV*SCHGAS
Trigger: GGAGGCTCCGTGGCACGATCACACGTGCAGGAGCTG...GACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATTGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR GCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCATGACAGAATCCATATaGTTCCTGCAGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVMTESI*FLQVSG
Trigger: CCCGCTGACCTGCAGGAAGCATATGGATTCTGTCAT...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp AGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGAAGGGGTTGCTGGATaGCTGCTCAAACACGTGCTT +
Preference number: 4 (lower is better)
Translates to: SSSSTKLACPGPGVRDCSEGVAG*LLKHVL
Trigger: AAGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTC...AGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp AGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTTCAGGGAGCTTCCTCTaGCTCTGCATGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: SSSSTKLACPGPGVRDCSSGSFL*LCMWNI
Trigger: GATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGA...AGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATGCCCCCGGGTTCCGCAGAAAGTaGTCGTTGTGTCACCAGGGC +
Preference number: 4 (lower is better)
Translates to: LLQLWCAHSRIVGTQDAPGFRRK*SLCHQG
Trigger: GCCCTGGTGACACAACGAGCACTTTCTGCGGAACCC...GGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp ACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGCTCCCTTCCATCTTaGGGCCGGTCCTGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: TLHAHFPGGAGQCIEFCFRSLPS*GRSCWA
Trigger: TGCCCAGCAGGACCGGCCCCAAGATGGAAGGGAGCG...GAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR CCA 90 bp GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGGGAAGAGGTGGCCGTTaGCACGGTACAGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: VSVENVHLGNRMTAPSAGGRGGR*HGTASS
Trigger: GGAGGAAGCTGTACCGTGCCAACGGCCACCTCTTCC...CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TATGCTTCCTGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGGACCAGCACCGTGGCAGCGCTTATaGACCAGCAGTTTGCAGTTG +
Preference number: 4 (lower is better)
Translates to: YASCRSAGRGRGSAYGPAPWQRL*TSSLQL
Trigger: CAACTGCAAACTGCTGGTCCATAAGCGCTGCCACGG...TGCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCCATCCCATCGATAACTaGCTTAAGGTCCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVHPIDN*LKVLRV
Trigger: GACTCGGAGGACCTTAAGCCAGTTATCGATGGGATG...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp CGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAAATCCTTTTAAAACATaGGAGGCTTTGACGGACAGG +
Preference number: 4 (lower is better)
Translates to: RQGPRGSAATQAQQQVPPNPFKT*EALTDR
Trigger: CCTGTCCGTCAAAGCCTCCCATGTTTTAAAAGGATT...TGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp GTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGGGCATCCTCATCGTCTaGGGTCAGCTGCACGGGCTC +
Preference number: 4 (lower is better)
Translates to: VVVCDLWLEWRERLLLLQGILIV*GQLHGL
Trigger: GAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCC...CTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp CTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCCTTCGAACTCTGACTaGTCGATCCTCTTTATGGCA +
Preference number: 4 (lower is better)
Translates to: LQHEAGLPGPRCEGLFCSPSNSD*SILFMA
Trigger: TGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGG...GGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATGCCCCCCGCACAGCAGGATTGTaGGGACACAAGATGCCCCCT +
Preference number: 4 (lower is better)
Translates to: LLQLWCAHSRIVGTQDAPRTAGL*GHKMPP
Trigger: AGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCG...GGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCGTCATGCTTCCGGGATaGGGAAATGTAAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVVMLPG*GNVSNS
Trigger: GGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp AGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCCCCTGAGAGATTTTaGTTCCATCCATCCCATCGA +
Preference number: 4 (lower is better)
Translates to: SSSSTKLACPGPGVRDCSAPERF*FHPSHR
Trigger: TCGATGGGATGGATGGAATCAAAATCTCTCAGGGGC...AGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTGCCCCTGAGAGATTTTaGTTCCATCCATCCCATCGA +
Preference number: 4 (lower is better)
Translates to: GSITRVHDRDARGLTPTPAPERF*FHPSHR
Trigger: TCGATGGGATGGATGGAATCAAAATCTCTCAGGGGC...AGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp TGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGGACCAGCAGTTTGCAGTTGCAGCCCAAGCCCCTaGGAGATTTTGATTCCATCC +
Preference number: 4 (lower is better)
Translates to: CRSAGRGRGSAYGPAVCSCSPSP*EILIPS
Trigger: GGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCA...ACTGCAAACTGCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR TCA 90 bp CTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTGAAACATGGGAGGCTTTaGCGGACAGGAACCGGGGGA +
Preference number: 4 (lower is better)
Translates to: LYGILIVWGQLHGLAGELKHGRL*RTGTGG
Trigger: TCCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTT...CAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp TCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCAAAGCCTTCGAACTCTaGCTGGTCGATCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SAATQAQQQVPPARSWPAKAFEL*LVDPLY
Trigger: ATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTT...GGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp ACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAGGGTGAGCGGGTGCTaGTGGTGCAGACGACACATG +
Preference number: 4 (lower is better)
Translates to: TRSLSWRSRSVHRVLFPWRVSGC*WCRRHM
Trigger: CATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCT...CCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR GCA 90 bp GACAGAATCCATATGCTTCCTGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTAATCCATATGCTTCCTaGAGGTCAGCGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: DRIHMLPAGQRDEAVAALNPYAS*RSAGRG
Trigger: GCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATT...AAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATTCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR GCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCTCTTTAATGCTGTCATaGTTCCGGGATGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVSLMLS*FRDEEM
Trigger: CATTTCCTCATCCCGGAAGCATGACAGCATTAAAGA...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATGTCGTCTGGGGTCAGCTaGACGGGCTCGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: CFFSSCGVRTAGLWGHKMSSGVS*TGSLVN
Trigger: GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGA...CATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp GTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGTCTCCAGCTGTGGTGTaGGCACAGCAGGATTGTGGG +
Preference number: 4 (lower is better)
Translates to: VICGWNGGSACFFSSCGVSPAVV*AQQDCG
Trigger: CCCACAATCCTGCTGTGCGCACACCACAGCTGGAGA...CACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp ATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCAGCGGGACGAGGCCGTaGCAGCGCTTATGGACCAGC +
Preference number: 4 (lower is better)
Translates to: ILFLRTLHAHFPGGAGQCSGTRP*QRLWTS
Trigger: GCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCT...GCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTCTCTGCCTCTGCATGTaGAACATCAGGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCLCLCM*NIRSPP
Trigger: CGGCGGGGACCTGATGTTCCACATGCAGAGGCAGAG...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTGATATACCTCTGCCTCTGCATGTaGAACATCAGGTCCCCGCCG +
Preference number: 4 (lower is better)
Translates to: RTRPHTDSSVDSNNGLIYLCLCM*NIRSPP
Trigger: CGGCGGGGACCTGATGTTCCACATGCAGAGGCAGAG...GTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTAATCCTTTTAAAACATaGGAGGCTTTGACGGACAGG +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPNPFKT*EALTDR
Trigger: CCTGTCCGTCAAAGCCTCCCATGTTTTAAAAGGATT...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CCA 90 bp AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACAGCCGAGCCTCTCTTTaGGGTCCTTATTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: RVPADPPRRRHSSKFLQHSRASL*GPYLKI
Trigger: GATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCT...GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp GTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCAGCCGAGCCTCTCTTTaGGGTCCTTATTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: VHLGNRMTAPSAGSPRIRSRASL*GPYLKI
Trigger: GATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCT...GCGGATCCGCGGGGACCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTAGCCGAGCCTCTCTTTaGGGTCCTTATTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPSRASL*GPYLKI
Trigger: GATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCT...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp TATGCTTCCTGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGGACCAGCAGCCCCTGAGAGATTTTaGTTCCATCCATCCCATCGA +
Preference number: 4 (lower is better)
Translates to: YASCRSAGRGRGSAYGPAAPERF*FHPSHR
Trigger: TCGATGGGATGGATGGAATCAAAATCTCTCAGGGGC...TGCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR TCA 90 bp GAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACATGCAGCCCAAGCCCCTaGGAGATTTTGATTCCATCC +
Preference number: 4 (lower is better)
Translates to: ERLLLLQLWCAHSRIVGTCSPSP*EILIPS
Trigger: GGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCA...TGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp TCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTTCTCGTGCAGGAAGTTaGGGGCGATGCAGATCTCGG +
Preference number: 4 (lower is better)
Translates to: SSVICGWNGGSACFFSSCSRAGS*GRCRSR
Trigger: CCGAGATCTGCATCGCCCTCAACTTCCTGCACGAGA...ACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTCAGGTCCCTGTAGATaGTCCCCCTCTCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCSGPCR*SPSRAG
Trigger: TCCTGCACGAGAGGGGGATCATCTACAGGGACCTGA...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp ACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAACATGGGAGGCTTTaGCGGACAGGAACCGGGGGA +
Preference number: 4 (lower is better)
Translates to: TRSLSWRSRSVHRVLFPWKHGRL*RTGTGG
Trigger: TCCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTT...CCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGGACCGTAGTCGTCTGTaGTCTGTGGCTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: VICGWNGGSACFFSSCGVDRSRL*SVAGME
Trigger: CTCCATTCCAGCCACAGATCACAGACGACTACGGTC...CACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCAAAGCCTTCGAACTCTaGCTGGTCGATCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVKAFEL*LVDPLY
Trigger: ATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTT...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR TCA 90 bp TCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGAAAAGCCTTCGAACTCTaGCTGGTCGATCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: SRVSTTETHAASHRLLGGKAFEL*LVDPLY
Trigger: ATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTT...TCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCACAGCAATAATGGGTTaGTATACTCAAAGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVTAIMG*YTQSLR
Trigger: TCGAAGGCTTTGAGTATATCAACCCATTATTGCTGT...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTCCCATATCCTCTCGCTaGACTGACCGCAGTACGCTC +
Preference number: 4 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCPISSR*TDRSTL
Trigger: GAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGG...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CATCTGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTGGAGCCCATATCCTCTCGCTaGACTGACCGCAGTACGCTC +
Preference number: 4 (lower is better)
Translates to: HLSPRKEGRRPRSCRLLEPISSR*TDRSTL
Trigger: GAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGG...CTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR GCA 90 bp CTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCTCTTTAATGCTGTCATaGTTCCGGGATGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: LQHEAGLPGPRCEGLFCSSLMLS*FRDEEM
Trigger: CATTTCCTCATCCCGGAAGCATGACAGCATTAAAGA...GGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCATATCCTCGTCATCATaGACCAGCTCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVISSSS*TSSFFT
Trigger: GGTGAAGAAAGAGCTGGTGCATGATGACGAGGATAT...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR GCA 90 bp TTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATTCGTCTGGGGTCAGCTaGACGGGCTCGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: FIPQDATRSLSWRSRSVHSSGVS*TGSLVN
Trigger: GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGA...ATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp ACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAGCGCAGATTCTTTATaGTCTGTGCGCGGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: TRSLSWRSRSVHRVLFPWSADSL*SVRGGR
Trigger: ACGCCCGCCGCGCACAGAGCATAAAGAATCTGCGCT...CCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR CCA 90 bp TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGTCTTCCAGCTCCATCTaGGAGGACACCGTGCAAGGG +
Preference number: 4 (lower is better)
Translates to: CFRGKCAPWKPHDSPLGRSSSSI*EDTVQG
Trigger: CCCTTGCACGGTGTCCTCCCAGATGGAGCTGGAAGA...CCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR CCA 90 bp TTTGGTCATTCTTCTTCAACCGCACCAGGAGAACCTTGGCGTAGCTCCCGCGCCTTGGCTTGGAAGAGGTaGCCGTTGGCACGGTACAGC +
Preference number: 4 (lower is better)
Translates to: FGHSSSTAPGEPWRSSRALAWKR*PLARYS
Trigger: GCTGTACCGTGCCAACGGCCACCTCTTCCAAGCCAA...GGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp GGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACTCTACTGGAGGCTCTTaGGAAGGCATGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: GAPASSPAVVCAQQDCGDSTGGS*EGMTES
Trigger: GGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGA...GTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp TTGCCTCGCGAGGCCCCATATCCTCTCGCTGCACTGACCGCAGTACGCTCTCCTTCTACTGGAGGCTCTTaGGAAGGCATGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: LPREAPYPLAALTAVRSPSTGGS*EGMTES
Trigger: GGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGA...AGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGGGCCTCGCGAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp GGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACCATCCCATCGATAACTaGCTTAAGGTCCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: GAPASSPAVVCAQQDCGDHPIDN*LKVLRV
Trigger: GACTCGGAGGACCTTAAGCCAGTTATCGATGGGATG...GTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp TTGCCTCGCGAGGCCCCATATCCTCTCGCTGCACTGACCGCAGTACGCTCTCCTCATCCCATCGATAACTaGCTTAAGGTCCTCCGAGTC +
Preference number: 4 (lower is better)
Translates to: LPREAPYPLAALTAVRSPHPIDN*LKVLRV
Trigger: GACTCGGAGGACCTTAAGCCAGTTATCGATGGGATG...AGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGGGCCTCGCGAGGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp TCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTCCAGGAAGGGGTTGCTaGATGCCTGCTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: SSGRYTLTFLAEQVSASSPGRGC*MPAQTR
Trigger: ACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGG...ACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATGCCCCCCTTCTTCTCCAGCTGTaGTGTGCGCACAGCAGGATT +
Preference number: 4 (lower is better)
Translates to: LLQLWCAHSRIVGTQDAPLLLQL*CAHSRI
Trigger: AATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAG...GGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp CCACATCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCCCTTCATCCCTGCACTaGCGGGCCAGGCGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PHHRNILFLRTLHAHFPGPSSLH*RARRKA
Trigger: GGCTTTCCGCCTGGCCCGTCAGTGCAGGGATGAAGG...GCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTCCGATGATGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR TCA 90 bp CTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGCAGCCCAAGCCCCTaGGAGATTTTGATTCCATCC +
Preference number: 4 (lower is better)
Translates to: LRTLHAHFPGGAGQCIEFCSPSP*EILIPS
Trigger: GGATGGAATCAAAATCTCTCAGGGGCTTGGGCTGCA...GAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp ACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAATCTGGGAGGACACCGTaGAAGGGTCACCTTCGCTGT +
Preference number: 4 (lower is better)
Translates to: TLTFLAEQVSASSSVSVESGRTP*KGHLRC
Trigger: ACAGCGAAGGTGACCCTTGCACGGTGTCCTCCCAGA...TTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR GCA 90 bp GCATCGAGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCATGGCAGGCCAGGCTaGTCAGGGGTGCTCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ASSSVSVENVHLGNRMTAHGRPG*SGVLGK
Trigger: TTTCCCGAGCACCCCTGAGCAGCCTGGCCTGCCATG...GGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACTCGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR GCA 90 bp GTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGGGGTTGCTGGATGCCTaGTCAAACACGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: VICGWNGGSACFFSSCGVGLLDA*SNTCFS
Trigger: AGAGAAGCACGTGTTTGAGCAGGCATCCAGCAACCC...CACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGAGCTTCCTCTGCCTCTaGATGTGGAACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VSVENVHLGNRMTAPSAGSFLCL*MWNIRS
Trigger: GGACCTGATGTTCCACATGCAGAGGCAGAGGAAGCT...CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp GATCCTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTAGCTTCCTCTGCCTCTaGATGTGGAACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: DPLYGILIVWGQLHGLAGSFLCL*MWNIRS
Trigger: GGACCTGATGTTCCACATGCAGAGGCAGAGGAAGCT...ACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAGGATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp CTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTGTCAGGGAGCTTCCTCTaGCTCTGCATGTGGAACATC +
Preference number: 4 (lower is better)
Translates to: LYGILIVWGQLHGLAGELSGSFL*LCMWNI
Trigger: GATGTTCCACATGCAGAGGCAGAGGAAGCTCCCTGA...CAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp ACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAGTCCCAGTCTATGCTaGGGAAGAACGCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: TRSLSWRSRSVHRVLFPWSPSLC*GRTRGT
Trigger: AGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACT...CCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTGATATACAGTCCCAGTCTATGCTaGGGAAGAACGCGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RTRPHTDSSVDSNNGLIYSPSLC*GRTRGT
Trigger: AGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACT...GTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTGGCGGAGCAGGTCAGTaGATCGAGTTCTGTTTCCGT +
Preference number: 4 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCGGAGQ*IEFCFR
Trigger: ACGGAAACAGAACTCGATGCACTGACCTGCTCCGCC...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp AGAATCCATATGCTTCCTGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGTTAAAGCGCTTGGCTTaGAAGAGGTGGCCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: RIHMLPAGQRDEAVAALMLKRLA*KRWPLA
Trigger: TGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAA...CATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: CFRGKCAPWKPHDSPLGRDLWLE*RERLLL
Trigger: AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATC...CCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATTCTGTGATCTGTGGCTaGAATGGAGGGAGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLLQLWCAHSRIVGTQDSVICG*NGGSAC
Trigger: GCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGA...ATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp CTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACGGTCGATCCTCTTTATaGCATCCTCATCGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LFMASSSSGVSCTGSLVNGRSSL*HPHRLG
Trigger: CCCCAGACGATGAGGATGCCATAAAGAGGATCGACC...GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
3UTR CAA 72 bp TCTGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTaGTCGTCTACTGGAGGCTCTTGGGAAGGCATGACA +
Preference number: 4 (lower is better)
Translates to: SVSSEGRSASSF*SSTGGSWEGMT
Trigger: TGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR TCA 90 bp GCATCGAGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCATCCTCTCGCTGCACTaGCCGCAGTACGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: ASSSVSVENVHLGNRMTAILSLH*PQYALL
Trigger: CAGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGAT...GGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACTCGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGGCCCCTGAGAGATTTTaGTTCCATCCATCCCATCGA +
Preference number: 4 (lower is better)
Translates to: VSVENVHLGNRMTAPSAGAPERF*FHPSHR
Trigger: TCGATGGGATGGATGGAATCAAAATCTCTCAGGGGC...CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp ATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCAAACATGGGAGGCTTTaGCGGACAGGAACCGGGGGA +
Preference number: 4 (lower is better)
Translates to: ILFLRTLHAHFPGGAGQCKHGRL*RTGTGG
Trigger: TCCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTT...GCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp ATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCACAGCAATAATGGGTTaGTATACTCAAAGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: IRRDAGTAASSSSTKLACTAIMG*YTQSLR
Trigger: TCGAAGGCTTTGAGTATATCAACCCATTATTGCTGT...GCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTACAGCAATAATGGGTTaGTATACTCAAAGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: GSAATQAQQQVPPARSWPTAIMG*YTQSLR
Trigger: TCGAAGGCTTTGAGTATATCAACCCATTATTGCTGT...AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp GATCCTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTCATGACAGAATCCTATaGTTCTGCAGACGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: DPLYGILIVWGQLHGLAGHDRIL*FCRRRW
Trigger: CCACCTCCGTCTGCAGAATCATAGGATTCTGTCATG...ACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTGGGTTGCTGGATGCCTaGTCAAACACGTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCGLLDA*SNTCFS
Trigger: AGAGAAGCACGTGTTTGAGCAGGCATCCAGCAACCC...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CGCACGCGGCCTCACACCGACTCCTCGGTGGACAGCAATAATGGGTTGATATACGAAGGGGTTGCTGGATaGCTGCTCAAACACGTGCTT +
Preference number: 4 (lower is better)
Translates to: RTRPHTDSSVDSNNGLIYEGVAG*LLKHVL
Trigger: AAGCACGTGTTTGAGCAGGCATCCAGCAACCCCTTC...GTATATCAACCCATTATTGCTGTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp ACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCATGATCCCCCTCTCGTaGAGGAAGTTGAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: TLHAHFPGGAGQCIEFCFMIPLS*RKLRAM
Trigger: CATCGCCCTCAACTTCCTGCACGAGAGGGGGATCAT...GAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp CTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATATGATCCCCCTCTCGTaGAGGAAGTTGAGGGCGATG +
Preference number: 4 (lower is better)
Translates to: LLLLQLWCAHSRIVGTQDMIPLS*RKLRAM
Trigger: CATCGCCCTCAACTTCCTGCACGAGAGGGGGATCAT...ATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp TTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATGCAAGTCCCAGTCTATaGTGCGGAAGAACGCGTGGG +
Preference number: 4 (lower is better)
Translates to: FIPQDATRSLSWRSRSVHASPSL*CGRTRG
Trigger: CCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGC...ATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp ACATCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGTCGTCTGGGGTCAGCTaGACGGGCTCGCTGGTGAAC +
Preference number: 4 (lower is better)
Translates to: TSSEHFIPQDATRSLSWRSSGVS*TGSLVN
Trigger: GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGA...CCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTCCGATGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR GCA 90 bp ACATCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGTGTGAGGGACTGTTCTaGTCCCAGCAGCGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: TSSEHFIPQDATRSLSWRCEGLF*SQQRPL
Trigger: CAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA...CCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTCCGATGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR GCA 90 bp AGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGATTCTTTATGCTCTGTaGGCGGCGGGCGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SSVSVENVHLGNRMTAPSILYAL*AAGVQG
Trigger: TCCCTGCACGCCCGCCGCGCACAGAGCATAAAGAAT...CGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR GCA 90 bp TCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGAGACCTTTCCACCAAGTaGTTTATACAACGGGATATT +
Preference number: 4 (lower is better)
Translates to: SRVSTTETHAASHRLLGGDLSTK*FIQRDI
Trigger: AATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTC...TCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp AGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGTTGGCTTGGAAGAGGTaGCCGTTGGCACGGTACAGC +
Preference number: 4 (lower is better)
Translates to: SSVSVENVHLGNRMTAPSLAWKR*PLARYS
Trigger: GCTGTACCGTGCCAACGGCCACCTCTTCCAAGCCAA...CGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTCTACTGGAGGCTCTTaGGAAGGCATGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: VSVENVHLGNRMTAPSAGSTGGS*EGMTES
Trigger: GGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGA...CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTCTACTGGAGGCTCTTaGGAAGGCATGACAGAATCC +
Preference number: 4 (lower is better)
Translates to: FLRTLHAHFPGGAGQCIESTGGS*EGMTES
Trigger: GGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGA...CTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp ACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAACCAGGAAGGGGTTGCTaGATGCCTGCTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: TLTFLAEQVSASSSVSVEPGRGC*MPAQTR
Trigger: ACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGG...TTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGAACCGACTTGTCGTCTaGAAGCAGGAGTGTAATCCG +
Preference number: 4 (lower is better)
Translates to: FLRTLHAHFPGGAGQCIENRLVV*KQECNP
Trigger: CGGATTACACTCCTGCTTCCAGACGACAAGTCGGTT...CTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACAACCGACTTGTCGTCTaGAAGCAGGAGTGTAATCCG +
Preference number: 4 (lower is better)
Translates to: LFMASSSSGVSCTGSLVNNRLVV*KQECNP
Trigger: CGGATTACACTCCTGCTTCCAGACGACAAGTCGGTT...GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp GTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGAATCCTTTTAAAACATaGGAGGCTTTGACGGACAGG +
Preference number: 4 (lower is better)
Translates to: VNHACPRQRRTRPHTDSSNPFKT*EALTDR
Trigger: CCTGTCCGTCAAAGCCTCCCATGTTTTAAAAGGATT...CGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp ATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCAGAAAATCCAGTCTGTaGCCGGCAGCCGAGCCTCTC +
Preference number: 4 (lower is better)
Translates to: ILFLRTLHAHFPGGAGQCRKSSL*PAAEPL
Trigger: GAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCT...GCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGGAAAATGTGCACCTTaGAAACCGCATGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: CFRGKCAPWKPHDSPLGRGKCAP*KPHDSP
Trigger: GGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCC...CCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTGCTCTTGGGAAGGCATaGCAGAATCCATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCALGKA*QNPYAS
Trigger: GGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGC...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp TTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGGTCATGCTTCCGGGATaGGGAAATGTAAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: FLRTLHAHFPGGAGQCIEVMLPG*GNVSNS
Trigger: GGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC...CTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp CTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTGGTCATGCTTCCGGGATaGGGAAATGTAAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: LYGILIVWGQLHGLAGELVMLPG*GNVSNS
Trigger: GGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC...CAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp CTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTGGAGGCTCTTGGGAGTCATGCTTCCGGGATaGGGAAATGTAAGCAATTCC +
Preference number: 4 (lower is better)
Translates to: LGRKVGVLVLVVYWRLLGVMLPG*GNVSNS
Trigger: GGAATTGCTTACATTTCCTCATCCCGGAAGCATGAC...TCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR TCA 90 bp CTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACGCTCTTGGGAAGGCATaGCAGAATCCTATGATTCTG +
Preference number: 4 (lower is better)
Translates to: LFMASSSSGVSCTGSLVNALGKA*QNPMIL
Trigger: CAGAATCATAGGATTCTGTCATGCCTTCCCAAGAGC...GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp ATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCAATCCATATGCTTCCTaGAGGTCAGCGGGACGAGGC +
Preference number: 4 (lower is better)
Translates to: ILFLRTLHAHFPGGAGQCNPYAS*RSAGRG
Trigger: GCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATT...GCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp ACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCTTAAAGCGCTTGGCTTaGAAGAGGTGGCCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: TLHAHFPGGAGQCIEFCFLKRLA*KRWPLA
Trigger: TGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAA...GAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCVLVVY*RLLGRH
Trigger: ATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAAC...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TTTGGTCATTCTTCTTCAACCGCACCAGGAGAACCTTGGCGTAGCTCCCGCGCCGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCAT +
Preference number: 4 (lower is better)
Translates to: FGHSSSTAPGEPWRSSRAVLVVY*RLLGRH
Trigger: ATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAAC...GGCGCGGGAGCTACGCCAAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CCA 90 bp CTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTGCTGCGGAAGAACGCGTaGGACTTGATGTCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LYGILIVWGQLHGLAGELLRKNA*DLMSEN
Trigger: ATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAG...CAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp TCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTCCTTCGAACTCTGACTaGTCGATCCTCTTTATGGCA +
Preference number: 4 (lower is better)
Translates to: SSGRYTLTFLAEQVSASSPSNSD*SILFMA
Trigger: TGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGG...ACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
3UTR CAA 72 bp GTCGGCGTCCTCGTTCTTGTCGTCTACTGGAGGCTCTaGGGAAGGCATGACAGAATCCATATGCTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VGVLVLVVYWRL*GRHDRIHMLPA
Trigger: TGCAGGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR TCA 90 bp CCACATCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCTCAGGTCCCTGTAGATaGTCCCCCTCTCGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: PHHRNILFLRTLHAHFPGSGPCR*SPSRAG
Trigger: TCCTGCACGAGAGGGGGATCATCTACAGGGACCTGA...GCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTCCGATGATGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR TCA 90 bp GTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGAGAACGCGTGGGACTTaGTGTCAGAAAATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: VVVCDLWLEWRERLLLLQRTRGT*CQKIQS
Trigger: AGACTGGATTTTCTGACATCAAGTCCCACGCGTTCT...CTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp GAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGACCGTAGTCGTCTGTaGTCTGTGGCTGGAATGGAG +
Preference number: 4 (lower is better)
Translates to: EHFIPQDATRSLSWRSRSDRSRL*SVAGME
Trigger: CTCCATTCCAGCCACAGATCACAGACGACTACGGTC...TGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp ACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAATGACAGAATCCATATaGTTCCTGCAGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TLTFLAEQVSASSSVSVEMTESI*FLQVSG
Trigger: CCCGCTGACCTGCAGGAAGCATATGGATTCTGTCAT...TTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp TTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATAGCTTCCTCTGCCTCTaGATGTGGAACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: FIPQDATRSLSWRSRSVHSFLCL*MWNIRS
Trigger: GGACCTGATGTTCCACATGCAGAGGCAGAGGAAGCT...ATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp GAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAAATGGAGGGAGCGCCTaGTTCTTCTCCAGCAAGTCC +
Preference number: 4 (lower is better)
Translates to: EHFIPQDATRSLSWRSRSNGGSA*FFSSKS
Trigger: GGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATT...TGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp GTAGTCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGTGTGGGGACACAAGATaGCCCCTTCATTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: VVVCDLWLEWRERLLLLQCGDTR*PLHSSV
Trigger: AACTGATGAATGAAGGGGGCATCTTGTGTCCCCACA...CTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp ATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCTTAAAGCGCTTGGCTTaGAAGAGGTGGCCGTTGGCA +
Preference number: 4 (lower is better)
Translates to: ILFLRTLHAHFPGGAGQCLKRLA*KRWPLA
Trigger: TGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAA...GCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp ATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAATAATGGGTTaGTATACTCAAAGCCTTCGA +
Preference number: 4 (lower is better)
Translates to: ICGWNGGSACFFSSCGVRTAIMG*YTQSLR
Trigger: TCGAAGGCTTTGAGTATATCAACCCATTATTGCTGT...GCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp AATTCCATCTGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACATGACAGAATCCATATaGTTCCTGCAGGTCAGCGGG +
Preference number: 4 (lower is better)
Translates to: NSICLLGRKVGVLVLVVYMTESI*FLQVSG
Trigger: CCCGCTGACCTGCAGGAAGCATATGGATTCTGTCAT...GTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR GCA 90 bp CTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTGTCTTTAATGCTGTCATaGTTCCGGGATGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: LYGILIVWGQLHGLAGELSLMLS*FRDEEM
Trigger: CATTTCCTCATCCCGGAAGCATGACAGCATTAAAGA...CAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp GCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACTGTGTGTCATACAACGGGATATTTTaGACAATGCTTGGTCATCTC +
Preference number: 4 (lower is better)
Translates to: ASSSSGVSCTGSLVNCVSYNGIF*TMLGHL
Trigger: GAGATGACCAAGCATTGTGCAAAATATCCCGTTGTA...TGACACACAGTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp GAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAACCAGGAAGGGGTTGCTaGATGCCTGCTCAAACACGT +
Preference number: 4 (lower is better)
Translates to: ELCVKVVQTVVVCDLWLEPGRGC*MPAQTR
Trigger: ACGTGTTTGAGCAGGCATCCAGCAACCCCTTCCTGG...TTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp AGTTCTGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGAACCGACTTGTCGTCTaGAAGCAGGAGTGTAATCCG +
Preference number: 4 (lower is better)
Translates to: SSVSVENVHLGNRMTAPSNRLVV*KQECNP
Trigger: CGGATTACACTCCTGCTTCCAGACGACAAGTCGGTT...CGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp CTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACAGCCGAGCCTCTCTTTaGGGTCCTTATTTAAAAATC +
Preference number: 4 (lower is better)
Translates to: LFMASSSSGVSCTGSLVNSRASL*GPYLKI
Trigger: GATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCT...GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CCA 90 bp ACATCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTT +
Preference number: 4 (lower is better)
Translates to: TSSEHFIPQDATRSLSWRDLWLE*RERLLL
Trigger: AAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATC...CCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTCCGATGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR CCA 90 bp GAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGGAAAATGTGCACCTTaGAAACCGCATGACAGCCCC +
Preference number: 4 (lower is better)
Translates to: EHFIPQDATRSLSWRSRSGKCAP*KPHDSP
Trigger: GGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCC...TGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGCGAGTTCTGTTTCCGTaGAAAATGTGCACCTTGGAA +
Preference number: 4 (lower is better)
Translates to: CFRGKCAPWKPHDSPLGRRVLFP*KMCTLE
Trigger: TTCCAAGGTGCACATTTTCCACGGAAACAGAACTCG...CCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp AGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATGCCCCCTTCATTCATTTTGCACAATGCTTaGTCATCTCCCCTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SCGVRTAGLWGHKMPPSFILHNA*SSPLSQ
Trigger: TTGGGACAGGGGAGATGACCAAGCATTGTGCAAAAT...GAATGAAGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp TTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATAGAACGCGTGGGACTTaGTGTCAGAAAATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: FIPQDATRSLSWRSRSVHRTRGT*CQKIQS
Trigger: AGACTGGATTTTCTGACATCAAGTCCCACGCGTTCT...ATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp ATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCAGAACGCGTGGGACTTaGTGTCAGAAAATCCAGTCT +
Preference number: 4 (lower is better)
Translates to: ILFLRTLHAHFPGGAGQCRTRGT*CQKIQS
Trigger: AGACTGGATTTTCTGACATCAAGTCCCACGCGTTCT...GCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR TCA 90 bp CAGTTAAAGGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCTTGTATTCTTTGTATaGAACACCAAGTCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: QLKGQSRVSTTETHAASHLVFFV*NTKSQS
Trigger: AGACTGGGACTTGGTGTTTCATACAAAGAATACAAG...GTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCCTTTAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTCTTTAATGCTGTCATaGTTCCGGGATGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCSLMLS*FRDEEM
Trigger: CATTTCCTCATCCCGGAAGCATGACAGCATTAAAGA...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGAATCCTTTTAAAACATaGGAGGCTTTGACGGACAGG +
Preference number: 4 (lower is better)
Translates to: CFRGKCAPWKPHDSPLGRNPFKT*EALTDR
Trigger: CCTGTCCGTCAAAGCCTCCCATGTTTTAAAAGGATT...CCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CCA 90 bp TCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCTCATCGTCTGGGGTCAGCCCTTCGAACTCTGACTaGTCGATCCTCTTTATGGCA +
Preference number: 4 (lower is better)
Translates to: SNSDWSILFMASSSSGVSPSNSD*SILFMA
Trigger: TGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGG...GCTGACCCCAGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR TCA 90 bp CTCGTTCTTGTCGTCTACTGGAGGCTCTTGGGAAGGCATGACAGAATCCATATGGCTCTTGGGAAGGCATaGCAGAATCCATATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LVLVVYWRLLGRHDRIHMALGKA*QNPYAS
Trigger: GGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGC...CATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR TCA 90 bp ATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCAAAGCCTTCGAACTCTaGCTGGTCGATCCTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ILFLRTLHAHFPGGAGQCKAFEL*LVDPLY
Trigger: ATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTT...GCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR GCA 90 bp AGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCTCATCGTCTGGGGATATCCTCGTCATCATaGACCAGCTCTTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: SLRTLTGRSSLWHPHRLGISSSS*TSSFFT
Trigger: GGTGAAGAAAGAGCTGGTGCATGATGACGAGGATAT...CCCCAGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp AGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCTCATCGTCTGGGGGGATATTTTGCACAATaGTTGGTCATCTCCCCTGTC +
Preference number: 4 (lower is better)
Translates to: SLRTLTGRSSLWHPHRLGGYFAQ*LVISPV
Trigger: GACAGGGGAGATGACCAAGCATTGTGCAAAATATCC...CCCCAGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR GCA 90 bp AATTCCATCTGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTCTTTAATGCTGTCATaGTTCCGGGATGAGGAAATG +
Preference number: 4 (lower is better)
Translates to: NSICLLGRKVGVLVLVVYSLMLS*FRDEEM
Trigger: CATTTCCTCATCCCGGAAGCATGACAGCATTAAAGA...GTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR GCA 90 bp GTCGTCTACTGGAGGCTCTTGGGAAGGCATGACAGAATCCATATGCTTCCTGCATTGAAAGAGGTGATTTaGCAAGTCCATCTTGAACAG +
Preference number: 4 (lower is better)
Translates to: VVYWRLLGRHDRIHMLPALKEVI*QVHLEQ
Trigger: CTGTTCAAGATGGACTTGGCAAATCACCTCTTTCAA...TGCAGGAAGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS GCA 90 bp CTGCAGCCGCACGCCTTCCCCGGGCCGTGGCACCAGCCGTGTTGCTaGCCGGAGCATCTGTGCAGCGCACAGGCAGCGGCAACGCCGGGA +
Preference number: 5 (lower is better)
Translates to: LQPHAFPGPWHQPCC*PEHLCSAQAAATPG
Trigger: TCCCGGCGTTGCCGCTGCCTGTGCGCTGCACAGATGCTCCGGGCAGCAACACGGCTGGTGCCACGGCCCGGGGAAGGCGTGCGGCTGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS TCA 90 bp GCGCGGCGGGCGTGCAGGGAGGCATCTTCCTTCCCGTTGACGAGCTaGTGCTGCGTCGGCTCGCCTCCGGCCCCGACAATAGGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: ARRACREASSFPLTS*CCVGSPPAPTIGRE
Trigger: CTCCCTGCCTATTGTCGGGGCCGGAGGCGAGCCGACGCAGCATCAGCTCGTCAACGGGAAGGAAGATGCCTCCCTGCACGCCCGCCGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400921.6
ENST00000495347.5
CDS TCA 90 bp GGACAGGATCCACCACGGGACGGCCGCTTGCTGACAGTGGAGCCGTaGAGTCACCCCAGGCCAACGCAGGCCGGGTCCGTCTGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GQDPPRDGRLLTVEP*SHPRPTQAGSVCPL
Trigger: CAGGGGACAGACGGACCCGGCCTGCGTTGGCCTGGGGTGACTTCACGGCTCCACTGTCAGCAAGCGGCCGTCCCGTGGTGGATCCTGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466352.5
CDS-3UTR CAA 90 bp CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCGCAGAAAGTGCTCGTaGTGTCACCAGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: LGRVPADPPRRRHSSKFLRRKCS*CHQGPG
Trigger: GCCTGGGCCCTGGTGACACAACGAGCACTTTCTGCG...GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCCGCAGAAAGTGCTCGTaGTGTCACCAGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: PAAPADASLCGLGASVCPRRKCS*CHQGPG
Trigger: GCCTGGGCCCTGGTGACACAACGAGCACTTTCTGCG...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCGTGGCACCAGCCGTGTaGCTGCCCGGAGCATCTGTG +
Preference number: 5 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVVAPAV*LPGASV
Trigger: CACAGATGCTCCGGGCAGCAACACGGCTGGTGCCAC...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS-3UTR CAA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGCGTTTCCCCTGACATaGCTGGGAGCTGCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PAAPADASLCGLGASVCPAFPLT*LGAAAA
Trigger: GGCTGCAGCAGCTCCCAGCAATGTCAGGGGAAACGC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS GCA 90 bp TTCCCCGGGCCGTGGCACCAGCCGTGTTGCTGCCCGGAGCATCTGTaGAGCGCACAGGCAGCGGCAACGCCGGGACTCAGACCCAAAATG +
Preference number: 5 (lower is better)
Translates to: FPGPWHQPCCCPEHL*SAQAAATPGLRPKM
Trigger: CATTTTGGGTCTGAGTCCCGGCGTTGCCGCTGCCTGTGCGCTGCACAGATGCTCCGGGCAGCAACACGGCTGGTGCCACGGCCCGGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS CCA 90 bp CTCATGGTGTCACGGCCTCGGCGGCTGGAGACAGAGGCCCAGGTGTaGATGGAGCCAGGTGTCCTCGCAGGGCGGACAGGATCCACCACG +
Preference number: 5 (lower is better)
Translates to: LMVSRPRRLETEAQV*MEPGVLAGRTGSTT
Trigger: CGTGGTGGATCCTGTCCGCCCTGCGAGGACACCTGGCTCCATCCACACCTGGGCCTCTGTCTCCAGCCGCCGAGGCCGTGACACCATGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000466352.5
ENST00000497183.5
CDS CCA 90 bp GGTGTGAAGCGGCGGAGACGGAGGTACTGTGGGCCACAGAGAAAGTaGCGCACAGCTGAGGGGCCGAGTCGAGGGACAGACGCGCAGCCG +
Preference number: 5 (lower is better)
Translates to: GVKRRRRRYCGPQRK*RTAEGPSRGTDAQP
Trigger: CGGCTGCGCGTCTGTCCCTCGACTCGGCCCCTCAGCTGTGCGCCACTTTCTCTGTGGCCCACAGTACCTCCGTCTCCGCCGCTTCACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471018.6
CDS CCA 90 bp GCGGGGGCCTCGCCGGCCTTCACTCTTGGCCACTGTGTGTGGACTTaGGAAGTGTGGGTGGGCCCCGGAATGAAGGAGGTGGCCCGTCAC +
Preference number: 5 (lower is better)
Translates to: AGASPAFTLGHCVWT*EVWVGPGMKEVARH
Trigger: GTGACGGGCCACCTCCTTCATTCCGGGGCCCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGAGGCCCCCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS-3UTR CAA 90 bp CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCGATGCACCTGTAGCCTaGCCTCGCGAGGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: LGRVPADPPRRRHSSKFLDAPVA*PREAPY
Trigger: ATATGGGGCCTCGCGAGGCAAGGCTACAGGTGCATC...GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGATGCACCTGTAGCCTaGCCTCGCGAGGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: PAAPADASLCGLGASVCPDAPVA*PREAPY
Trigger: ATATGGGGCCTCGCGAGGCAAGGCTACAGGTGCATC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS CCA 90 bp AGGCATCCGTTGATAGGCTTCCGTGGTAACCCGCCCACCCAGGCCTaGAGGACACCAGCAGCGTCCCCACTGTTCCACAGGCGGTCGCGC +
Preference number: 5 (lower is better)
Translates to: RHPLIGFRGNPPTQA*RTPAASPLFHRRSR
Trigger: GCGCGACCGCCTGTGGAACAGTGGGGACGCTGCTGGTGTCCTCCAGGCCTGGGTGGGCGGGTTACCACGGAAGCCTATCAACGGATGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479566.5
CDS CCA 90 bp CTGGGACAGGATCTGCTGGGGGCTGGAGCGAGGCAGTTTCTTGCATaGGGACAGCACCGCAGGTCACGGGTGGGGTGGCCTCAAGGCCTG +
Preference number: 5 (lower is better)
Translates to: LGQDLLGAGARQFLA*GQHRRSRVGWPQGL
Trigger: CAGGCCTTGAGGCCACCCCACCCGTGACCTGCGGTGCTGTCCCCATGCAAGAAACTGCCTCGCTCCAGCCCCCAGCAGATCCTGTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS-3UTR CAA 90 bp CTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCATCAGGTCCCCGCCGTaGACGTACTCAATGACCAGG +
Preference number: 5 (lower is better)
Translates to: LGRVPADPPRRRHSSKFLIRSPP*TYSMTR
Trigger: CCTGGTCATTGAGTACGTCAACGGCGGGGACCTGAT...GAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCCTCTCGTGCAGGAAGTaGAGGGCGATGCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: PAAPADASLCGLGASVCPLSCRK*RAMQIS
Trigger: CGAGATCTGCATCGCCCTCAACTTCCTGCACGAGAG...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS GCA 90 bp ACAACAGCCTCTCACTGCGTTTCCCCTGACATTGCTGGGAGCTGCTaGAGCCGCACGCCTTCCCCGGGCCGTGGCACCAGCCGTGTTGCT +
Preference number: 5 (lower is better)
Translates to: TTASHCVSPDIAGSC*SRTPSPGRGTSRVA
Trigger: AGCAACACGGCTGGTGCCACGGCCCGGGGAAGGCGTGCGGCTGCAGCAGCTCCCAGCAATGTCAGGGGAAACGCAGTGAGAGGCTGTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS GCA 90 bp GCCGGGGGCTTGTGGGGGCTCAGGAAGATGGGTCCTATCCAAGACTaGCGCCTGAGTCTCACGCTGCAGCCCAGAGCTAGGACGGCACCA +
Preference number: 5 (lower is better)
Translates to: AGGLWGLRKMGPIQD*RLSLTLQPRARTAP
Trigger: TGGTGCCGTCCTAGCTCTGGGCTGCAGCGTGAGACTCAGGCGGCAGTCTTGGATAGGACCCATCTTCCTGAGCCCCCACAAGCCCCCGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000479263.5
CDS CCA 90 bp GTGCAGGTGAGGGAGTCATGCGGGGGCCTCGCCGGCCTTCACTCTTaGCCACTGTGTGTGGACTTGGGAAGTGTGGGTGGGCCCCGGAAT +
Preference number: 5 (lower is better)
Translates to: VQVRESCGGLAGLHS*PLCVDLGSVGGPRN
Trigger: ATTCCGGGGCCCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGAGGCCCCCGCATGACTCCCTCACCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS-3UTR CAA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTTCGGCGTCCTCGTTCTaGTCGTCTACTGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: LPAAPADASLCGLGASVCSASSF*SSTGGS
Trigger: AGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGA...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCCCGACCAGGAAGGGGTaGCTGGATGCCTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: RIRRDAGTAASSSSTKLAPTRKG*LDACSN
Trigger: GTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGG...GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTATCAGGTCCCCGCCGTaGACGTACTCAATGACCAGG +
Preference number: 5 (lower is better)
Translates to: LPAAPADASLCGLGASVCIRSPP*TYSMTR
Trigger: CCTGGTCATTGAGTACGTCAACGGCGGGGACCTGAT...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCTCTCGTGCAGGAAGTaGAGGGCGATGCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVLSCRK*RAMQIS
Trigger: CGAGATCTGCATCGCCCTCAACTTCCTGCACGAGAG...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCCGCAGAAAGTGCTCGTaGTGTCACCAGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVRRKCS*CHQGPG
Trigger: GCCTGGGCCCTGGTGACACAACGAGCACTTTCTGCG...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTAAAACATGGGAGGCTTaGACGGACAGGAACCGGGGG +
Preference number: 5 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPKTWEA*TDRNRG
Trigger: CCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTTT...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS TCA 90 bp CATGGGGACAGCACCGCAGGTCACGGGTGGGGTGGCCTCAAGGCCTaGTTTCATTGCTGCAAGGCTGAGGAGTCCACCGGCCCTCCAAGG +
Preference number: 5 (lower is better)
Translates to: HGDSTAGHGWGGLKA*FHCCKAEESTGPPR
Trigger: CCTTGGAGGGCCGGTGGACTCCTCAGCCTTGCAGCAATGAAATCAGGCCTTGAGGCCACCCCACCCGTGACCTGCGGTGCTGTCCCCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS GCA 90 bp CAGCAACTCGAAGAGCTGAAGCTGGGGCCGGGGCTGAAGCACAGCTaGCGAACGCCTCCCGGCCACAGCCACTACTTGTCCCTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QQLEELKLGPGLKHS*RTPPGHSHYLSLQK
Trigger: CTTCTGCAGGGACAAGTAGTGGCTGTGGCCGGGAGGCGTTCGGCAGCTGTGCTTCAGCCCCGGCCCCAGCTTCAGCTCTTCGAGTTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495347.5
CDS CCA 90 bp TCGCCGGCCTTCACTCTTGGCCACTGTGTGTGGACTTGGGAAGTGTaGGTGGGCCCCGGAATGAAGGAGGTGGCCCGTCACCAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: SPAFTLGHCVWTWEV*VGPGMKEVARHQVG
Trigger: TCCCACCTGGTGACGGGCCACCTCCTTCATTCCGGGGCCCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS-3UTR CAA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTGGAAGAGGTGGCCGTaGGCACGGTACAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVWKRWP*ARYSFL
Trigger: GAGGAAGCTGTACCGTGCCAACGGCCACCTCTTCCA...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp CACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGGTGGACTCGGCGTCCTCGTTCTaGTCGTCTACTGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: HACPRQRRTRPHTDSSVDSASSF*SSTGGS
Trigger: AGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGA...GTCCACCGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCCCGACCAGGAAGGGGTaGCTGGATGCCTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVPTRKG*LDACSN
Trigger: GTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGG...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp CTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCAGGAACAACCGACTaGTCGTCTGGAAGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: LPAAPADASLCGLGASVCPGTTD*SSGSRS
Trigger: ACTCCTGCTTCCAGACGACAAGTCGGTTGTTCCTGG...ACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp CAGCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAAAGAACGCGTGGGACTaGATGTCAGAAAATCCAGTC +
Preference number: 5 (lower is better)
Translates to: QPPRQGPRGSAATQAQQQKNAWD*MSENPV
Trigger: GACTGGATTTTCTGACATCAAGTCCCACGCGTTCTT...TTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGTTAAAGCGCTTGGCTaGGAAGAGGTGGCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: GSAATQAQQQVPPARSWPVKALG*EEVAVG
Trigger: GCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAAC...AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp GGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTCTCCTGTTAAAGCGCTaGGCTTGGAAGAGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: GSAATQAQQQVPPARSWPLLLKR*AWKRWP
Trigger: CGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAG...AGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCCTCCTGTTAAAGCGCTaGGCTTGGAAGAGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVLLLKR*AWKRWP
Trigger: CGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAG...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp CTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCCCAGGAACAACCGACTaGTCGTCTGGAAGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: LQHEAGLPGPRCEGLFCSPGTTD*SSGSRS
Trigger: ACTCCTGCTTCCAGACGACAAGTCGGTTGTTCCTGG...GGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTGTGTTCATGTCCGGGTaGTCGGTGATGATGTCGAAC +
Preference number: 5 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPVFMSG*SVMMSN
Trigger: GTTCGACATCATCACCGACAACCCGGACATGAACAC...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS TCA 90 bp TCACGGGTGGGGTGGCCTCAAGGCCTGATTTCATTGCTGCAAGGCTaGGGAGTCCACCGGCCCTCCAAGGGAACAAGCTGGGGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SRVGWPQGLISLLQG*GVHRPSKGTSWGQG
Trigger: TCCCTGACCCCAGCTTGTTCCCTTGGAGGGCCGGTGGACTCCTCAGCCTTGCAGCAATGAAATCAGGCCTTGAGGCCACCCCACCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000472017.1
ENST00000505322.5
CDS GCA 90 bp ACCGCTCCGGCTTTCTTCTCCTGCCTCCTCAGCGCAGATTCTTTATaGTCTGTGCGCGGCGGGCGTGCAGGGAGGCATCTTCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: TAPAFFSCLLSADSL*SVRGGRAGRHLPSR
Trigger: ACGGGAAGGAAGATGCCTCCCTGCACGCCCGCCGCGCACAGAGCATAAAGAATCTGCGCTGAGGAGGCAGGAGAAGAAAGCCGGAGCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495347.5
CDS-3UTR CAA 90 bp TTGCCTCGCGAGGCCCCATATCCTCTCGCTGCACTGACCGCAGTACGCTCTCCTTGGAAGAGGTGGCCGTaGGCACGGTACAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LPREAPYPLAALTAVRSPWKRWP*ARYSFL
Trigger: GAGGAAGCTGTACCGTGCCAACGGCCACCTCTTCCA...AGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGGGCCTCGCGAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CAA 90 bp GGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCACCGACCAGGAAGGGGTaGCTGGATGCCTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: GWNGGSACFFSSCGVRTAPTRKG*LDACSN
Trigger: GTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGG...TGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp AGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTCCAGGAACAACCGACTaGTCGTCTGGAAGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: RHSSKFLQHEAGLPGPRCPGTTD*SSGSRS
Trigger: ACTCCTGCTTCCAGACGACAAGTCGGTTGTTCCTGG...ACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACGAAGCTGGCCGTGTTCATGTCCGGGTaGTCGGTGATGATGTCGAAC +
Preference number: 5 (lower is better)
Translates to: RIRRDAGTAASSSSTKLAVFMSG*SVMMSN
Trigger: GTTCGACATCATCACCGACAACCCGGACATGAACAC...GGCCAGCTTCGTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp GGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTAAAACATGGGAGGCTTaGACGGACAGGAACCGGGGG +
Preference number: 5 (lower is better)
Translates to: GSITRVHDRDARGLTPTPKTWEA*TDRNRG
Trigger: CCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTTT...AGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp GCCCCCTCGGCAGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTGACAGCAATAATGGGTaGATATACTCAAAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: APSAGSPRIRRDAGTAASDSNNG*IYSKPS
Trigger: CGAAGGCTTTGAGTATATCAACCCATTATTGCTGTC...ACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCTGCCGAGGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS GCA 90 bp CGGCTTTCTTCTCCTGCCTCCTCAGCGCAGATTCTTTATGCTCTGTaGGCGGCGGGCGTGCAGGGAGGCATCTTCCTTCCCGTTGACGAG +
Preference number: 5 (lower is better)
Translates to: RLSSPASSAQILYAL*AAGVQGGIFLPVDE
Trigger: CTCGTCAACGGGAAGGAAGATGCCTCCCTGCACGCCCGCCGCGCACAGAGCATAAAGAATCTGCGCTGAGGAGGCAGGAGAAGAAAGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400921.6
ENST00000495347.5
CDS CCA 90 bp GGGTCACCTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTGCTGCTaGTGCAGACGACACATGTCTCTCACTTCCTCACAGAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GSPSLSTHLRVSGCC*CRRHMSLTSSQSSS
Trigger: CGAGGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000479566.5
ENST00000503297.1
CDS CCA 90 bp ATCAACACAGAATCTTCATCACTCAAGGACCCCTGCGGCCCAAGCTaGCTGTGCGGAGCAGCCCTGCGTCTGCTGAGGTCCCTTCGCACC +
Preference number: 5 (lower is better)
Translates to: INTESSSLKDPCGPS*LCGAALRLLRSLRT
Trigger: GGTGCGAAGGGACCTCAGCAGACGCAGGGCTGCTCCGCACAGCCAGCTTGGGCCGCAGGGGTCCTTGAGTGATGAAGATTCTGTGTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470596.5
CDS CCA 90 bp GGGCTACCTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTGCTGCTaGTGCAGACGACACATGTCTCTCACTTCCTCACAGAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GLPSLSTHLRVSGCC*CRRHMSLTSSQSSS
Trigger: CGAGGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484419.1
CDS-3UTR CAA 90 bp TATGCTTCCTGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGGACCAGCACTCCTGTTAAAGCGCTaGGCTTGGAAGAGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: YASCRSAGRGRGSAYGPALLLKR*AWKRWP
Trigger: CGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAG...TGCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CAA 90 bp GGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACCTCTCGTGCAGGAAGTaGAGGGCGATGCAGATCTCG +
Preference number: 5 (lower is better)
Translates to: GAPASSPAVVCAQQDCGDLSCRK*RAMQIS
Trigger: CGAGATCTGCATCGCCCTCAACTTCCTGCACGAGAG...GTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp GATCCTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTCGCAGAAAGTGCTCGTaGTGTCACCAGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: DPLYGILIVWGQLHGLAGRRKCS*CHQGPG
Trigger: GCCTGGGCCCTGGTGACACAACGAGCACTTTCTGCG...ACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp AGGGTCCCCGCGGATCCGCCGCGACGCAGGCACAGCAGCAAGTTCCTCCAGCACCTTCTCCAGGATCACTaGGAAAAGGTAGTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: RVPADPPRRRHSSKFLQHLLQDH*EKVVLC
Trigger: ACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAG...GTGCTGGAGGAACTTGCTGCTGTGCCTGCGTCGCGGCGGATCCGCGGGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCTTCTCCAGGATCACTaGGAAAAGGTAGTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVLLQDH*EKVVLC
Trigger: ACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAG...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS GCA 90 bp CAAGGGTCACCTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTGCTaGTGGTGCAGACGACACATGTCTCTCACTTCCTCACAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QGSPSLSTHLRVSGC*WCRRHMSLTSSQSS
Trigger: GGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTGACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000479566.5
ENST00000503297.1
CDS GCA 90 bp GATGTGCAGGAGCTGACGCTGACGTCACAGGAAAACAAGCATCTCTaGATCAGCACAGTCCAGAGAGCGGGCGGGCAGCAGCCAGACCCA +
Preference number: 5 (lower is better)
Translates to: DVQELTLTSQENKHL*ISTVQRAGGQQPDP
Trigger: TGGGTCTGGCTGCTGCCCGCCCGCTCTCTGGACTGTGCTGATGCAGAGATGCTTGTTTTCCTGTGACGTCAGCGTCAGCTCCTGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS GCA 90 bp CAAGGGCTACCTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTGCTaGTGGTGCAGACGACACATGTCTCTCACTTCCTCACAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QGLPSLSTHLRVSGC*WCRRHMSLTSSQSS
Trigger: GGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTAGCCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484419.1
CDS GCA 90 bp GGACAAGGGCTACCTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTaGTGCTGGTGCAGACGACACATGTCTCTCACTTCCTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: GQGLPSLSTHLRVSG*CWCRRHMSLTSSQS
Trigger: GCTCTGTGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTAGCCCTTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484419.1
CDS CCA 90 bp GAGGCTGTAGGTCAAAGGGCAAGAAACAAGGGTGGAGCCAGGATGTaGGTGCTGTCCACACCAGGACAGAGGGTCTGGCTGGTGGGGAGT +
Preference number: 5 (lower is better)
Translates to: EAVGQRARNKGGARM*VLSTPGQRVWLVGS
Trigger: ACTCCCCACCAGCCAGACCCTCTGTCCTGGTGTGGACAGCACCCACATCCTGGCTCCACCCTTGTTTCTTGCCCTTTGACCTACAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470986.5
CDS-3UTR CAA 90 bp ACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCTCGCTGTCCACCCACTaGAGGGTGAGCGGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: TLHAHFPGGAGQCIEFCFSLSTH*RVSGCC
Trigger: GCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGA...GAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR CAA 90 bp TCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTGGAAGAGGTGGCCGTaGGCACGGTACAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SSGRYTLTFLAEQVSASSWKRWP*ARYSFL
Trigger: GAGGAAGCTGTACCGTGCCAACGGCCACCTCTTCCA...ACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp TTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGCCGACCAGGAAGGGGTaGCTGGATGCCTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: FLRTLHAHFPGGAGQCIEPTRKG*LDACSN
Trigger: GTTTGAGCAGGCATCCAGCAACCCCTTCCTGGTCGG...CTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCAGCCGAGCCTCTCTTaGGGGTCCTTATTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVQPSLS*GSLFKN
Trigger: ATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTG...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp CCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCGACAGCAATAATGGGTaGATATACTCAAAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: PAAPADASLCGLGASVCPDSNNG*IYSKPS
Trigger: CGAAGGCTTTGAGTATATCAACCCATTATTGCTGTC...GGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp TGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGGACCAGCAGTTTGCAGTTTTGCCAAGTCCATCTaGAACAGCCGCTCTGGCAGC +
Preference number: 5 (lower is better)
Translates to: CRSAGRGRGSAYGPAVCSFAKSI*NSRSGS
Trigger: GCTGCCAGAGCGGCTGTTCAAGATGGACTTGGCAAA...ACTGCAAACTGCTGGTCCATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CAA 90 bp CTCTTTATGGCATCCTCATCGTCTGGGGTCAGCTGCACGGGCTCGCTGGTGAACGTGCGCACAGCAGGATaGTGGGGACACAAGATGCCC +
Preference number: 5 (lower is better)
Translates to: LFMASSSSGVSCTGSLVNVRTAG*WGHKMP
Trigger: GGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCAC...GTTCACCAGCGAGCCCGTGCAGCTGACCCCAGACGATGAGGATGCCATAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS TCA 90 bp CCGGGTAGCCGGCAACTTGAAAGAGGTGATTTGCCAAGTCCATCTTaGACAGCCGCTCTGGCAGCCCCCAGCTCCTGCACGTGTGATCGT +
Preference number: 5 (lower is better)
Translates to: PGSRQLERGDLPSPS*TAALAAPSSCTCDR
Trigger: ACGATCACACGTGCAGGAGCTGGGGGCTGCCAGAGCGGCTGTTCAAGATGGACTTGGCAAATCACCTCTTTCAAGTTGCCGGCTACCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS GCA 90 bp CTCGGGAAAACTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTGCTaGTGGTGCAGACGACACATGTCTCTCACTTCCTCACAGAGCTCC +
Preference number: 5 (lower is better)
Translates to: LGKTSLSTHLRVSGC*WCRRHMSLTSSQSS
Trigger: GGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGTTTTCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468310.5
CDS GCA 90 bp GTGCTCGGGAAAACTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTaGTGCTGGTGCAGACGACACATGTCTCTCACTTCCTCACAGAGC +
Preference number: 5 (lower is better)
Translates to: VLGKTSLSTHLRVSG*CWCRRHMSLTSSQS
Trigger: GCTCTGTGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGTTTTCCCGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468310.5
CDS GCA 90 bp TCCTGGCTCCAGGAGTCCGTAGGCCTGACTTGTCCCCTCGGGGGATaGTCTGCCTGCCCAACAACCCTCTCTGAAGAGAGAAAGAAAGAG +
Preference number: 5 (lower is better)
Translates to: SWLQESVGLTCPLGG*SACPTTLSEERKKE
Trigger: CTCTTTCTTTCTCTCTTCAGAGAGGGTTGTTGGGCAGGCAGAGCATCCCCCGAGGGGACAAGTCAGGCCTACGGACTCCTGGAGCCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471018.6
CDS GCA 90 bp TCTGTCTACGGCAGCCGGGTAGCCGGCAACTTGAAAGAGGTGATTTaGCAAGTCCATCTTGAACAGCCGCTCTGGCAGCCCCCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: SVYGSRVAGNLKEVI*QVHLEQPLWQPPAP
Trigger: AGGAGCTGGGGGCTGCCAGAGCGGCTGTTCAAGATGGACTTGGCAAATCACCTCTTTCAAGTTGCCGGCTACCCGGCTGCCGTAGACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS CCA 90 bp ACCCCCTGCAGGCAGTTCAAGACCAGAGCCCTTCCTAGGGGCATCTaGGCCCAGGTCCTTGATAAGCATCTGTGGCCAACCTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: TPCRQFKTRALPRGI*AQVLDKHLWPTSFP
Trigger: TGGGAAAGAGGTTGGCCACAGATGCTTATCAAGGACCTGGGCCCAGATGCCCCTAGGAAGGGCTCTGGTCTTGAACTGCCTGCAGGGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466651.5
CDS CCA 90 bp GGGAAAACTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTGCTGCTaGTGCAGACGACACATGTCTCTCACTTCCTCACAGAGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: GKTSLSTHLRVSGCC*CRRHMSLTSSQSSS
Trigger: CGAGGAGCTCTGTGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGTTTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468310.5
CDS-3UTR CAA 90 bp AGAATCCATATGCTTCCTGCAGGTCAGCGGGACGAGGCCGTGGCAGCGCTTATGTCGGCGTCCTCGTTCTaGTCGTCTACTGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: RIHMLPAGQRDEAVAALMSASSF*SSTGGS
Trigger: AGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGA...CATAAGCGCTGCCACGGCCTCGTCCCGCTGACCTGCAGGAAGCATATGGATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CAA 90 bp ATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCCCAGGAACAACCGACTaGTCGTCTGGAAGCAGGAGT +
Preference number: 5 (lower is better)
Translates to: ICGWNGGSACFFSSCGVRPGTTD*SSGSRS
Trigger: ACTCCTGCTTCCAGACGACAAGTCGGTTGTTCCTGG...GCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp GTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGAAAACATGGGAGGCTTaGACGGACAGGAACCGGGGG +
Preference number: 5 (lower is better)
Translates to: VSVENVHLGNRMTAPSAGKTWEA*TDRNRG
Trigger: CCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTTT...CCCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp TGTGAGGGACTGTTCTGCTCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCAAGAACGCGTGGGACTaGATGTCAGAAAATCCAGTC +
Preference number: 5 (lower is better)
Translates to: CEGLFCSQQRPLTLPSAVKNAWD*MSENPV
Trigger: GACTGGATTTTCTGACATCAAGTCCCACGCGTTCTT...GACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGAGCAGAACAGTCCCTCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS GCA 90 bp ATAGATTCGGCTTTCTTCTCCTGCCTCCTCAGCGCAGATTCTTTATaGTCTGTGCGCGGCGGGCGTGCAGGGAGGCATCTTCCTTCCCGT +
Preference number: 5 (lower is better)
Translates to: IDSAFFSCLLSADSL*SVRGGRAGRHLPSR
Trigger: ACGGGAAGGAAGATGCCTCCCTGCACGCCCGCCGCGCACAGAGCATAAAGAATCTGCGCTGAGGAGGCAGGAGAAGAAAGCCGAATCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS GCA 90 bp CAGGAGTCCGTAGGCCTGACTTGTCCCCTCGGGGGATGCTCTGCCTaGCCAACAACCCTCTCTGAAGAGAGAAAGAAAGAGAAGGGTGTG +
Preference number: 5 (lower is better)
Translates to: QESVGLTCPLGGCSA*PTTLSEERKKEKGV
Trigger: CACACCCTTCTCTTTCTTTCTCTCTTCAGAGAGGGTTGTTGGGCAGGCAGAGCATCCCCCGAGGGGACAAGTCAGGCCTACGGACTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471018.6
CDS CCA 90 bp TGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCATGACAGAATCCTGAGCCTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: CLLGRKVGVLVLVVY*RLLGRHDRILSLLP
Trigger: AGGCAGCAGGCTCAGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479263.5
CDS CCA 90 bp AACTTGAAAGAGGTGATTTGCCAAGTCCATCTTGAACAGCCGCTCTaGCAGCCCCCAGCTCCTGCACGTGTGATCGTGCCACGGAGCCTC +
Preference number: 5 (lower is better)
Translates to: NLKEVICQVHLEQPL*QPPAPARVIVPRSL
Trigger: GAGGCTCCGTGGCACGATCACACGTGCAGGAGCTGGGGGCTGCCAGAGCGGCTGTTCAAGATGGACTTGGCAAATCACCTCTTTCAAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CAA 90 bp ACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAGATGCACCTGTAGCCTaGCCTCGCGAGGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: TLTFLAEQVSASSSVSVEDAPVA*PREAPY
Trigger: ATATGGGGCCTCGCGAGGCAAGGCTACAGGTGCATC...TTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCCCTTTTCATGGCGTAAATTaGGTCATTCTTCTTCAACCG +
Preference number: 5 (lower is better)
Translates to: QQRPLTLPSAVSAQASVPFHGVN*VILLQP
Trigger: CGGTTGAAGAAGAATGACCAAATTTACGCCATGAAA...AGGGACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp TCCCAGCAGCGCCCGCTGACGCTTCCCTCTGCGGTCTCGGCGCAAGCGTCTGTCTTTCATGGCGTAAATTaGGTCATTCTTCTTCAACCG +
Preference number: 5 (lower is better)
Translates to: SQQRPLTLPSAVSAQASVFHGVN*VILLQP
Trigger: CGGTTGAAGAAGAATGACCAAATTTACGCCATGAAA...GACAGACGCTTGCGCCGAGACCGCAGAGGGAAGCGTCAGCGGGCGCTGCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
CDS-3UTR CAA 90 bp AGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATGCCCCCTTCATTCATCAGGTCCCCGCCGTaGACGTACTCAATGACCAGG +
Preference number: 5 (lower is better)
Translates to: SCGVRTAGLWGHKMPPSFIRSPP*TYSMTR
Trigger: CCTGGTCATTGAGTACGTCAACGGCGGGGACCTGAT...GAATGAAGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS TCA 90 bp TCTCCAGCAAGTCCCAGTCTATGCTGCGGAAGAACGCGTGGGACTTaGTGTCAGAAAATCCAGTCTGTGGCCGGCAGCCGAGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: SPASPSLCCGRTRGT*CQKIQSVAGSRASL
Trigger: AAGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGCTGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000479263.5
ENST00000505322.5
CDS TCA 90 bp CCTGCCCAACAACCCTCTCTGAAGAGAGAAAGAAAGAGAAGGGTGTaGAGCGGCGGAGACGGAGGTACTGTGGGCCACAGAGAAAGTGGC +
Preference number: 5 (lower is better)
Translates to: PAQQPSLKRERKRRV*SGGDGGTVGHRESG
Trigger: GCCACTTTCTCTGTGGCCCACAGTACCTCCGTCTCCGCCGCTTCACACCCTTCTCTTTCTTTCTCTCTTCAGAGAGGGTTGTTGGGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471018.6
CDS CCA 90 bp TGCTTCTTCTCCAGCAAGTCCCAGTCTATGCTGCGGAAGAACGCGTaGGACTTGATGTCAGAAAATCCAGTCTGTGGCCGGCAGCCGAGC +
Preference number: 5 (lower is better)
Translates to: CFFSSKSQSMLRKNA*DLMSENPVCGRQPS
Trigger: GCTCGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGCTGGAGAAGAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000479263.5
ENST00000505322.5
CDS-3UTR CAA 90 bp AATTCCATCTGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACGATGCACCTGTAGCCTaGCCTCGCGAGGCCCCATAT +
Preference number: 5 (lower is better)
Translates to: NSICLLGRKVGVLVLVVYDAPVA*PREAPY
Trigger: ATATGGGGCCTCGCGAGGCAAGGCTACAGGTGCATC...GTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CAA 90 bp ACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAATCGGCGTCCTCGTTCTaGTCGTCTACTGGAGGCTCT +
Preference number: 5 (lower is better)
Translates to: TLTFLAEQVSASSSVSVESASSF*SSTGGS
Trigger: AGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGA...TTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CTCCAGCACGAAGCTGGCCTGCCCGGGCCCAGGTGTGAGGGACTGTTCTGCTCCTTTCATGGCGTAAATTaGGTCATTCTTCTTCAACCG +
Preference number: 5 (lower is better)
Translates to: LQHEAGLPGPRCEGLFCSFHGVN*VILLQP
Trigger: CGGTTGAAGAAGAATGACCAAATTTACGCCATGAAA...GGAGCAGAACAGTCCCTCACACCTGGGCCCGGGCAGGCCAGCTTCGTGCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp ACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAAATCAGGTCCCCGCCGTaGACGTACTCAATGACCAGG +
Preference number: 5 (lower is better)
Translates to: TLTFLAEQVSASSSVSVEIRSPP*TYSMTR
Trigger: CCTGGTCATTGAGTACGTCAACGGCGGGGACCTGAT...TTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp ACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCAAAACATGGGAGGCTTaGACGGACAGGAACCGGGGG +
Preference number: 5 (lower is better)
Translates to: TLHAHFPGGAGQCIEFCFKTWEA*TDRNRG
Trigger: CCCCCGGTTCCTGTCCGTCAAAGCCTCCCATGTTTT...GAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp GTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCGACTCCTCGCAGCCGAGCCTCTCTTaGGGGTCCTTATTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: VNHACPRQRRTRPHTDSSQPSLS*GSLFKN
Trigger: ATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTG...CGAGGAGTCGGTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp GGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACAAGAACGCGTGGGACTaGATGTCAGAAAATCCAGTC +
Preference number: 5 (lower is better)
Translates to: GAPASSPAVVCAQQDCGDKNAWD*MSENPV
Trigger: GACTGGATTTTCTGACATCAAGTCCCACGCGTTCTT...GTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS TCA 90 bp GAAACACCAAGTCCCAGTCTATGCTGCGGAAGAACGCGTGGGACTTaGTGTCAGAAAATCCAGTCTGTGGCCGGCAGCCGAGCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: ETPSPSLCCGRTRGT*CQKIQSVAGSRASL
Trigger: AAGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGGTGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp TGTTTCCGTGGAAAATGTGCACCTTGGAAACCGCATGACAGCCCCCTCGGCAGGGTGTTCATGTCCGGGTaGTCGGTGATGATGTCGAAC +
Preference number: 5 (lower is better)
Translates to: CFRGKCAPWKPHDSPLGRVFMSG*SVMMSN
Trigger: GTTCGACATCATCACCGACAACCCGGACATGAACAC...CCTGCCGAGGGGGCTGTCATGCGGTTTCCAAGGTGCACATTTTCCACGGAAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp TCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGTGTTCATGTCCGGGTaGTCGGTGATGATGTCGAAC +
Preference number: 5 (lower is better)
Translates to: SSVICGWNGGSACFFSSCVFMSG*SVMMSN
Trigger: GTTCGACATCATCACCGACAACCCGGACATGAACAC...ACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS CCA 90 bp GTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTTCTCCAGCAAGTCCCAGTCTATGCT +
Preference number: 5 (lower is better)
Translates to: VKVVQTVVVCDLWLE*RERLLLLQQVPVYA
Trigger: AGCATAGACTGGGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000479263.5
ENST00000505322.5
CDS CCA 90 bp GAACTGTGTGTCAAAGTTGTCCAGACCGTAGTCGTCTGTGATCTGTaGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCAAGTCCCA +
Preference number: 5 (lower is better)
Translates to: ELCVKVVQTVVVCDL*LEWRERLLLLQQVP
Trigger: TGGGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGACAACTTTGACACACAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000479263.5
ENST00000505322.5
CDS-3UTR CAA 90 bp GAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCACTCCTGTTAAAGCGCTaGGCTTGGAAGAGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: EHFIPQDATRSLSWRSRSLLLKR*AWKRWP
Trigger: CGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAG...TGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS-3UTR CAA 90 bp CAGTTAAAGGGTCAATCACGCGTGTCCACGACAGAGACGCACGCGGCCTCACACCTTCTCCAGGATCACTaGGAAAAGGTAGTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: QLKGQSRVSTTETHAASHLLQDH*EKVVLC
Trigger: ACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAG...GTGTGAGGCCGCGTGCGTCTCTGTCGTGGACACGCGTGATTGACCCTTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp ACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTTTCCGTGGAACGGACTCAGCGGACCTaGAAAATGCGACATCAGAAC +
Preference number: 5 (lower is better)
Translates to: TLTFLAEQVSASSSVSVERTQRT*KMRHQN
Trigger: GTTCTGATGTCGCATTTTCAAGGTCCGCTGAGTCCG...TTCCACGGAAACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000400921.6
CDS-3UTR CAA 90 bp AGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGTTCTGTAAGAACGCGTGGGACTaGATGTCAGAAAATCCAGTC +
Preference number: 5 (lower is better)
Translates to: RTLHAHFPGGAGQCIEFCKNAWD*MSENPV
Trigger: GACTGGATTTTCTGACATCAAGTCCCACGCGTTCTT...ACAGAACTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS GCA 90 bp CGGAGGTGGCCACTCGGTACTGCAGGCCATGACCTTTCCACCAAGTaGTTTATACAACGGGATATTTTGCACAATGCTTGGTCATCTCCC +
Preference number: 5 (lower is better)
Translates to: RRWPLGTAGHDLSTK*FIQRDILHNAWSSP
Trigger: GGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTGCAGTACCGAGTGGCCACCTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478770.6
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS CCA 90 bp AGCGCCTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTaGGGACACAAGATGCCCCCTTCATTCATCAGTTACTTGTATTCT +
Preference number: 5 (lower is better)
Translates to: SACFFSSCGVRTAGL*GHKMPPSFISYLYS
Trigger: AGAATACAAGTAACTGATGAATGAAGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAGGCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp TTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCATCGAGGACAGCAATAATGGGTaGATATACTCAAAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: FLRTLHAHFPGGAGQCIEDSNNG*IYSKPS
Trigger: CGAAGGCTTTGAGTATATCAACCCATTATTGCTGTC...CTCGATGCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS TCA 90 bp TCAGGGAGAAGCCAGGTGGGAAGTGGCATCCCGGTTTCGCAGACATaGTCGTATGATTTTAAAAGATCCGCAGATGTCATCAGGACCACG +
Preference number: 5 (lower is better)
Translates to: SGRSQVGSGIPVSQT*SYDFKRSADVIRTT
Trigger: CGTGGTCCTGATGACATCTGCGGATCTTTTAAAATCATACGATCATGTCTGCGAAACCGGGATGCCACTTCCCACCTGGCTTCTCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS TCA 90 bp GCTGGCCTGAAAACACCCGTACAGCAACTGGGAGAACCTTACAGGTaGCAGTTGACACATCACACCAGACTTAGCTTCTGTGCAGTTCAC +
Preference number: 5 (lower is better)
Translates to: AGLKTPVQQLGEPYR*QLTHHTRLSFCAVH
Trigger: GTGAACTGCACAGAAGCTAAGTCTGGTGTGATGTGTCAACTGTCACCTGTAAGGTTCTCCCAGTTGCTGTACGGGTGTTTTCAGGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS-3UTR CAA 90 bp GTGATCTGTGGCTGGAATGGAGGGAGCGCCTGCTTCTTCTCCAGCTGTGGTGTGTTTCATGGCGTAAATTaGGTCATTCTTCTTCAACCG +
Preference number: 5 (lower is better)
Translates to: VICGWNGGSACFFSSCGVFHGVN*VILLQP
Trigger: CGGTTGAAGAAGAATGACCAAATTTACGCCATGAAA...CACACCACAGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp ATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGAGCAGGTCAGTGCCTTCTCCAGGATCACTaGGAAAAGGTAGTCCTCTGT +
Preference number: 5 (lower is better)
Translates to: ILFLRTLHAHFPGGAGQCLLQDH*EKVVLC
Trigger: ACAGAGGACTACCTTTTCCAAGTGATCCTGGAGAAG...GCACTGACCTGCTCCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378567.8
ENST00000400921.6
CDS TCA 90 bp CCTATGATTCTGCAGACGGAGGTGGCCACTCGGTACTGCAGGCCATaGCCTTTCCACCAAGTGCTTTATACAACGGGATATTTTGCACAA +
Preference number: 5 (lower is better)
Translates to: PMILQTEVATRYCRP*PFHQVLYTTGYFAQ
Trigger: TTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTGCAGTACCGAGTGGCCACCTCCGTCTGCAGAATCATAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478770.6
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS GCA 90 bp CAGGCCATGACCTTTCCACCAAGTGCTTTATACAACGGGATATTTTaGACAATGCTTGGTCATCTCCCCTGTCCCAAAGCTGCATCCTGT +
Preference number: 5 (lower is better)
Translates to: QAMTFPPSALYNGIF*TMLGHLPCPKAASC
Trigger: ACAGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486681.5
ENST00000503672.1
CDS CCA 90 bp GCAGAATATCAGAAATACCCTTCTTTTTCTTACCGACTTGTCGTCTaGAAGCAGGAGTGTAATCCGACCAGGAAGGGGTTGCTGGATGCC +
Preference number: 5 (lower is better)
Translates to: AEYQKYPSFSYRLVV*KQECNPTRKGLLDA
Trigger: GGCATCCAGCAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCAGACGACAAGTCGGTAAGAAAAAGAAGGGTATTTCTGATATTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS-3UTR CAA 90 bp TCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCTCATCGTCTGGGGTCAGCGACAGCAATAATGGGTaGATATACTCAAAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: SNSDWSILFMASSSSGVSDSNNG*IYSKPS
Trigger: CGAAGGCTTTGAGTATATCAACCCATTATTGCTGTC...GCTGACCCCAGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS-3UTR CAA 90 bp ATTCCATCCATCCCATCGATAACTGGCTTAAGGTCCTCCGAGTCGTCTTTAATGCGGGTAGCCGGCAACTaGAAAGAGGTGATTTGCCAA +
Preference number: 5 (lower is better)
Translates to: IPSIPSITGLRSSESSLMRVAGN*KEVICQ
Trigger: TTGGCAAATCACCTCTTTCAAGTTGCCGGCTACCCG...CATTAAAGACGACTCGGAGGACCTTAAGCCAGTTATCGATGGGATGGATGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS-3UTR CAA 90 bp CTGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTGGGGACACAAGATATACAACGGGATATTTaGCACAATGCTTGGTCATCT +
Preference number: 5 (lower is better)
Translates to: LLLLQLWCAHSRIVGTQDIQRDI*HNAWSS
Trigger: AGATGACCAAGCATTGTGCAAAATATCCCGTTGTAT...ATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS GCA 90 bp CAGGCCATGACCTTTCCACCAAGTGCTTTATACAACGGGATATTTTaGACAATGCTTGGTCATCTCCCCTGTCCCAAAGCTGCATCCATA +
Preference number: 5 (lower is better)
Translates to: QAMTFPPSALYNGIF*TMLGHLPCPKAASI
Trigger: TATGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497183.5
CDS CCA 90 bp TCCTTGATAAGCATCTGTGGCCAACCTCTTTCCCACCATCCCCACTaGGGAAAAGTTGGCGCCAACAAGTTTAATTCCACAGCTTTAAGT +
Preference number: 5 (lower is better)
Translates to: SLISICGQPLSHHPH*GKVGANKFNSTALS
Trigger: ACTTAAAGCTGTGGAATTAAACTTGTTGGCGCCAACTTTTCCCCAGTGGGGATGGTGGGAAAGAGGTTGGCCACAGATGCTTATCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484419.1
CDS-3UTR CAA 90 bp ACATCATCGGAACATTTTATTCCTCAGGACGCTACACGCTCACTTTCCTGGCGGCAGCCGAGCCTCTCTTaGGGGTCCTTATTTAAAAAT +
Preference number: 5 (lower is better)
Translates to: TSSEHFIPQDATRSLSWRQPSLS*GSLFKN
Trigger: ATTTTTAAATAAGGACCCCAAAGAGAGGCTCGGCTG...CCGCCAGGAAAGTGAGCGTGTAGCGTCCTGAGGAATAAAATGTTCCGATGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000378567.8
CDS-3UTR CAA 90 bp TCAAAGCCTTCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCTCATCGTCTTATTTTGCACAATGCTaGGTCATCTCCCCTGTCCCA +
Preference number: 5 (lower is better)
Translates to: SKPSNSDWSILFMASSSSYFAQC*VISPVP
Trigger: TGGGACAGGGGAGATGACCAAGCATTGTGCAAAATA...AGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGAAGGCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS CCA 90 bp CTTTCCACCAAGTGCTTTATACAACGGGATATTTTGCACAATGCTTaGTCATCTCCCCTGTCCCAAAGCTGCATCCTGTCAGTAACCAAG +
Preference number: 5 (lower is better)
Translates to: LSTKCFIQRDILHNA*SSPLSQSCILSVTK
Trigger: CTTGGTTACTGACAGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486681.5
ENST00000503672.1
CDS CCA 90 bp CTTTCCACCAAGTGCTTTATACAACGGGATATTTTGCACAATGCTTaGTCATCTCCCCTGTCCCAAAGCTGCATCCATATGCTTCCTGCA +
Preference number: 5 (lower is better)
Translates to: LSTKCFIQRDILHNA*SSPLSQSCIHMLPA
Trigger: TGCAGGAAGCATATGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497183.5
CDS-3UTR CAA 90 bp TCGAACTCTGACTGGTCGATCCTCTTTATGGCATCCTCATCGTCTGGGGTCAGCAGTTACTTGTATTCTTaGTATGAAACACCAAGTCCC +
Preference number: 5 (lower is better)
Translates to: SNSDWSILFMASSSSGVSSYLYS*YETPSP
Trigger: GGGACTTGGTGTTTCATACAAAGAATACAAGTAACT...GCTGACCCCAGACGATGAGGATGCCATAAAGAGGATCGACCAGTCAGAGTTCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS TCA 90 bp CAGTTGACACATCACACCAGACTTAGCTTCTGTGCAGTTCACATCTaGAATCTGCAGAATATCAGAAATACCCTTCTTTTTCTTACCGAC +
Preference number: 5 (lower is better)
Translates to: QLTHHTRLSFCAVHI*NLQNIRNTLLFLTD
Trigger: GTCGGTAAGAAAAAGAAGGGTATTTCTGATATTCTGCAGATTTCAGATGTGAACTGCACAGAAGCTAAGTCTGGTGTGATGTGTCAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS GCA 90 bp CACATCACACCAGACTTAGCTTCTGTGCAGTTCACATCTGAAATCTaGAGAATATCAGAAATACCCTTCTTTTTCTTACCGACTTGTCGT +
Preference number: 5 (lower is better)
Translates to: HITPDLASVQFTSEI*RISEIPFFFLPTCR
Trigger: ACGACAAGTCGGTAAGAAAAAGAAGGGTATTTCTGATATTCTGCAGATTTCAGATGTGAACTGCACAGAAGCTAAGTCTGGTGTGATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS TCA 72 bp GGAAGGAGCCCGCGCTGTCCACGACGTGTCCGCGGGTaGCGCTCACGGGCGGGGACCGAGGACCTCCCGCGA +
Preference number: 6 (lower is better)
Translates to: GRSPRCPRRVRG*RSRAGTEDLPR
Trigger: TCGCGGGAGGTCCTCGGTCCCCGCCCGTGAGCGTCACCCGCGGACACGTCGTGGACAGCGCGGGCTCCTTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503297.1
CDS CAA 72 bp GCCGCACGCCTTCCCCGGGCCGTGGCACCAGCCGTGTaGCTGCCCGGAGCATCTGTGCAGCGCACAGGCAGC +
Preference number: 6 (lower is better)
Translates to: AARLPRAVAPAV*LPGASVQRTGS
Trigger: GCTGCCTGTGCGCTGCACAGATGCTCCGGGCAGCAACACGGCTGGTGCCACGGCCCGGGGAAGGCGTGCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS CAA 90 bp GCTGCTGCAGCCGCACGCCTTCCCCGGGCCGTGGCACCAGCCGTGTaGCTGCCCGGAGCATCTGTGCAGCGCACAGGCAGCGGCAACGCC +
Preference number: 6 (lower is better)
Translates to: AAAAARLPRAVAPAV*LPGASVQRTGSGNA
Trigger: GGCGTTGCCGCTGCCTGTGCGCTGCACAGATGCTCCGGGCAGCAACACGGCTGGTGCCACGGCCCGGGGAAGGCGTGCGGCTGCAGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS TCA 72 bp CGCGGCGGGCGTGCAGGGAGGCATCTTCCTTCCCGTTaGCGAGCTGATGCTGCGTCGGCTCGCCTCCGGCCC +
Preference number: 6 (lower is better)
Translates to: RGGRAGRHLPSR*RADAASARLRP
Trigger: GGGCCGGAGGCGAGCCGACGCAGCATCAGCTCGTCAACGGGAAGGAAGATGCCTCCCTGCACGCCCGCCGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400921.6
ENST00000495347.5
CDS GCA 72 bp CACGCCTTCCCCGGGCCGTGGCACCAGCCGTGTTGCTaGCCGGAGCATCTGTGCAGCGCACAGGCAGCGGCA +
Preference number: 6 (lower is better)
Translates to: HAFPGPWHQPCC*PEHLCSAQAAA
Trigger: TGCCGCTGCCTGTGCGCTGCACAGATGCTCCGGGCAGCAACACGGCTGGTGCCACGGCCCGGGGAAGGCGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS TCA 72 bp CCACCACGGGACGGCCGCTTGCTGACAGTGGAGCCGTaGAGTCACCCCAGGCCAACGCAGGCCGGGTCCGTC +
Preference number: 6 (lower is better)
Translates to: PPRDGRLLTVEP*SHPRPTQAGSV
Trigger: GACGGACCCGGCCTGCGTTGGCCTGGGGTGACTTCACGGCTCCACTGTCAGCAAGCGGCCGTCCCGTGGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466352.5
CDS CCA 72 bp AGAGGGTCTGGCTGGTGGGGAGTCGAGGGTGCGGGCTaGAGGGTGAGGGTCCTGAGTCCAGGCCGGCAGCAG +
Preference number: 6 (lower is better)
Translates to: RGSGWWGVEGAG*RVRVLSPGRQQ
Trigger: CTGCTGCCGGCCTGGACTCAGGACCCTCACCCTCCAGCCCGCACCCTCGACTCCCCACCAGCCAGACCCTCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000470986.5
CDS GCA 72 bp CCGTGGCACCAGCCGTGTTGCTGCCCGGAGCATCTGTaGAGCGCACAGGCAGCGGCAACGCCGGGACTCAGA +
Preference number: 6 (lower is better)
Translates to: PWHQPCCCPEHL*SAQAAATPGLR
Trigger: TCTGAGTCCCGGCGTTGCCGCTGCCTGTGCGCTGCACAGATGCTCCGGGCAGCAACACGGCTGGTGCCACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS GCA 72 bp GCCTCTCACTGCGTTTCCCCTGACATTGCTGGGAGCTaGTGCAGCCGCACGCCTTCCCCGGGCCGTGGCACC +
Preference number: 6 (lower is better)
Translates to: ASHCVSPDIAGS*CSRTPSPGRGT
Trigger: GGTGCCACGGCCCGGGGAAGGCGTGCGGCTGCAGCAGCTCCCAGCAATGTCAGGGGAAACGCAGTGAGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS TCA 72 bp AGGCAGCGGCAACGCCGGGACTCAGACCCAAAATGCTaGCTCGGGCACCGTCCTCCGCACGCACAGGGCCTG +
Preference number: 6 (lower is better)
Translates to: RQRQRRDSDPKC*LGHRPPHAQGL
Trigger: CAGGCCCTGTGCGTGCGGAGGACGGTGCCCGAGTCAGCATTTTGGGTCTGAGTCCCGGCGTTGCCGCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461106.6
CDS TCA 72 bp GAGGTACTGTGGGCCACAGAGAAAGTGGCGCACAGCTaGGGGGCCGAGTCGAGGGACAGACGCGCAGCCGGG +
Preference number: 6 (lower is better)
Translates to: EVLWATEKVAHS*GAESRDRRAAG
Trigger: CCCGGCTGCGCGTCTGTCCCTCGACTCGGCCCCTCAGCTGTGCGCCACTTTCTCTGTGGCCCACAGTACCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000471018.6
CDS CAA 90 bp GGTGCAGGTGAGGGAGTCATGCGGGGGCCTCGCCGGCCTTCACTCTaGGCCACTGTGTGTGGACTTGGGAAGTGTGGGTGGGCCCCGGAA +
Preference number: 6 (lower is better)
Translates to: GAGEGVMRGPRRPSL*ATVCGLGKCGWAPE
Trigger: TTCCGGGGCCCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGAGGCCCCCGCATGACTCCCTCACCTGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS CCA 72 bp CGGCGGAGACGGAGGTACTGTGGGCCACAGAGAAAGTaGCGCACAGCTGAGGGGCCGAGTCGAGGGACAGAC +
Preference number: 6 (lower is better)
Translates to: RRRRRYCGPQRK*RTAEGPSRGTD
Trigger: GTCTGTCCCTCGACTCGGCCCCTCAGCTGTGCGCCACTTTCTCTGTGGCCCACAGTACCTCCGTCTCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471018.6
CDS CCA 72 bp GATCTGCTGGGGGCTGGAGCGAGGCAGTTTCTTGCATaGGGACAGCACCGCAGGTCACGGGTGGGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: DLLGAGARQFLA*GQHRRSRVGWP
Trigger: AGGCCACCCCACCCGTGACCTGCGGTGCTGTCCCCATGCAAGAAACTGCCTCGCTCCAGCCCCCAGCAGATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS TCA 72 bp GCGTGCAGGGAGGCATCTTCCTTCCCGTTGACGAGCTaGTGCTGCGTCGGCTCGCCTCCGGCCCCGACAATA +
Preference number: 6 (lower is better)
Translates to: ACREASSFPLTS*CCVGSPPAPTI
Trigger: TATTGTCGGGGCCGGAGGCGAGCCGACGCAGCATCAGCTCGTCAACGGGAAGGAAGATGCCTCCCTGCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400921.6
ENST00000495347.5
CDS CCA 72 bp GGGGCCTCGCCGGCCTTCACTCTTGGCCACTGTGTGTaGACTTGGGAAGTGTGGGTGGGCCCCGGAATGAAG +
Preference number: 6 (lower is better)
Translates to: GASPAFTLGHCV*TWEVWVGPGMK
Trigger: CTTCATTCCGGGGCCCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGAGGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS CCA 72 bp AGGGAGTCATGCGGGGGCCTCGCCGGCCTTCACTCTTaGCCACTGTGTGTGGACTTGGGAAGTGTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: RESCGGLAGLHS*PLCVDLGSVGG
Trigger: CCCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGAGGCCCCCGCATGACTCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS CAA 72 bp GAGGGAGTCATGCGGGGGCCTCGCCGGCCTTCACTCTaGGCCACTGTGTGTGGACTTGGGAAGTGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: EGVMRGPRRPSL*ATVCGLGKCGW
Trigger: CCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGAGGCCCCCGCATGACTCCCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS TCA 72 bp AGCACCGCAGGTCACGGGTGGGGTGGCCTCAAGGCCTaGTTTCATTGCTGCAAGGCTGAGGAGTCCACCGGC +
Preference number: 6 (lower is better)
Translates to: STAGHGWGGLKA*FHCCKAEESTG
Trigger: GCCGGTGGACTCCTCAGCCTTGCAGCAATGAAATCAGGCCTTGAGGCCACCCCACCCGTGACCTGCGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS GCA 72 bp CTCATGTGGCTCTACCCACGAAGACAGGGCGCATCCTaGCCTAACCAGCCTACGGCAGGTCCTGGCTCCAGG +
Preference number: 6 (lower is better)
Translates to: LMWLYPRRQGAS*PNQPTAGPGSR
Trigger: CCTGGAGCCAGGACCTGCCGTAGGCTGGTTAGGGCAGGATGCGCCCTGTCTTCGTGGGTAGAGCCACATGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471018.6
CDS TCA 72 bp GGCTCAGGAAGATGGGTCCTATCCAAGACTGCCGCCTaGGTCTCACGCTGCAGCCCAGAGCTAGGACGGCAC +
Preference number: 6 (lower is better)
Translates to: GSGRWVLSKTAA*VSRCSPELGRH
Trigger: GTGCCGTCCTAGCTCTGGGCTGCAGCGTGAGACTCAGGCGGCAGTCTTGGATAGGACCCATCTTCCTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479263.5
CDS TCA 72 bp ACAACCGCAGGTCACGGGTGGGGTGGCCTCAAGGCCTaGTTTCATTGCTGCAAGGCTGAGGAGTCCACCGGC +
Preference number: 6 (lower is better)
Translates to: TTAGHGWGGLKA*FHCCKAEESTG
Trigger: GCCGGTGGACTCCTCAGCCTTGCAGCAATGAAATCAGGCCTTGAGGCCACCCCACCCGTGACCTGCGGTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472017.1
CDS GCA 72 bp TCTCCTGCCTCCTCAGCGCAGATTCTTTATGCTCTGTaGGCGGCGGGCGTGCAGGGAGGCATCTTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: SPASSAQILYAL*AAGVQGGIFLP
Trigger: GGGAAGGAAGATGCCTCCCTGCACGCCCGCCGCGCACAGAGCATAAAGAATCTGCGCTGAGGAGGCAGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400921.6
ENST00000495347.5
CDS GCA 72 bp CCACAGGCCAGCGGCACCGCTCCGGCTTTCTTCTCCTaGCTCCTCAGCGCAGATTCTTTATGCTCTGTGCGC +
Preference number: 6 (lower is better)
Translates to: PQASGTAPAFFS*LLSADSLCSVR
Trigger: GCGCACAGAGCATAAAGAATCTGCGCTGAGGAGGCAGGAGAAGAAAGCCGGAGCGGTGCCGCTGGCCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495347.5
CDS CCA 72 bp TCGCCGGCCTTCACTCTTGGCCACTGTGTGTGGACTTaGGAAGTGTGGGTGGGCCCCGGAATGAAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: SPAFTLGHCVWT*EVWVGPGMKEV
Trigger: CACCTCCTTCATTCCGGGGCCCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS CAA 72 bp CTCGCCGGCCTTCACTCTTGGCCACTGTGTGTGGACTaGGGAAGTGTGGGTGGGCCCCGGAATGAAGGAGGT +
Preference number: 6 (lower is better)
Translates to: LAGLHSWPLCVD*GSVGGPRNEGG
Trigger: ACCTCCTTCATTCCGGGGCCCACCCACACTTCCCAAGTCCACACACAGTGGCCAAGAGTGAAGGCCGGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS TCA 72 bp CCTTGCCTCGCGAGGCCCCATATCCTCTCGCTGCACTaGCCGCAGTACGCTCTCCTGTTAAAGCGCTTGGCT +
Preference number: 6 (lower is better)
Translates to: PCLARPHILSLH*PQYALLLKRLA
Trigger: AGCCAAGCGCTTTAACAGGAGAGCGTACTGCGGTCAGTGCAGCGAGAGGATATGGGGCCTCGCGAGGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000419838.6
ENST00000461106.6
ENST00000461465.5
ENST00000466352.5
ENST00000468310.5
ENST00000470511.5
ENST00000470596.5
ENST00000470986.5
ENST00000471018.6
ENST00000481140.5
ENST00000482686.5
ENST00000486681.5
ENST00000495347.5
ENST00000496325.5
ENST00000497183.5
CDS GCA 72 bp TTGTGGGGGCTCAGGAAGATGGGTCCTATCCAAGACTaGCGCCTGAGTCTCACGCTGCAGCCCAGAGCTAGG +
Preference number: 6 (lower is better)
Translates to: LWGLRKMGPIQD*RLSLTLQPRAR
Trigger: CCTAGCTCTGGGCTGCAGCGTGAGACTCAGGCGGCAGTCTTGGATAGGACCCATCTTCCTGAGCCCCCACAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479263.5
CDS GCA 72 bp CCTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTGCTaGTGGTGCAGACGACACATGTCTCTCACTTCCTCA +
Preference number: 6 (lower is better)
Translates to: PSLSTHLRVSGC*WCRRHMSLTSS
Trigger: TGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000378567.8
ENST00000479566.5
ENST00000484419.1
ENST00000503297.1
CDS GCA 72 bp TCACCTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTaGTGCTGGTGCAGACGACACATGTCTCTCACTTCC +
Preference number: 6 (lower is better)
Translates to: SPSLSTHLRVSG*CWCRRHMSLTS
Trigger: GGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000378567.8
ENST00000479566.5
ENST00000503297.1
CDS GCA 72 bp TTTCGGGGGCGATGTAATTCGGGGTTCCGCAGAAAGTaGTCGTTGTGTCACCAGGGCCCAGGCCTTCCTTGC +
Preference number: 6 (lower is better)
Translates to: FRGRCNSGFRRK*SLCHQGPGLPC
Trigger: GCAAGGAAGGCCTGGGCCCTGGTGACACAACGAGCACTTTCTGCGGAACCCCGAATTACATCGCCCCCGAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000472017.1
ENST00000478770.6
ENST00000479263.5
ENST00000505322.5
CDS GCA 72 bp GCTTTCTTCTCCTGCCTCCTCAGCGCAGATTCTTTATaGTCTGTGCGCGGCGGGCGTGCAGGGAGGCATCTT +
Preference number: 6 (lower is better)
Translates to: AFFSCLLSADSL*SVRGGRAGRHL
Trigger: AAGATGCCTCCCTGCACGCCCGCCGCGCACAGAGCATAAAGAATCTGCGCTGAGGAGGCAGGAGAAGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400921.6
ENST00000495347.5
CDS GCA 72 bp AAAGGGCAAGAAACAAGGGTGGAGCCAGGATGTGGGTaGTGTCCACACCAGGACAGAGGGTCTGGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: KGQETRVEPGCG*CPHQDRGSGWW
Trigger: CCACCAGCCAGACCCTCTGTCCTGGTGTGGACAGCACCCACATCCTGGCTCCACCCTTGTTTCTTGCCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470986.5
CDS GCA 72 bp CTACCTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTaGTGCTGGTGCAGACGACACATGTCTCTCACTTCC +
Preference number: 6 (lower is better)
Translates to: LPSLSTHLRVSG*CWCRRHMSLTS
Trigger: GGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGGTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484419.1
CDS CCA 72 bp GAGGTGATTTGCCAAGTCCATCTTGAACAGCCGCTCTaGCAGCCCCCAGCTCCTGCACGTGTGATCGTGCCA +
Preference number: 6 (lower is better)
Translates to: EVICQVHLEQPL*QPPAPARVIVP
Trigger: TGGCACGATCACACGTGCAGGAGCTGGGGGCTGCCAGAGCGGCTGTTCAAGATGGACTTGGCAAATCACCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS GCA 72 bp TCGTCTGTGATCTGTGGCTGGAATGGAGGGAGCGCCTaGTTCTTCTCCAGCAAGTCCCAGTCTATGCTGCGG +
Preference number: 6 (lower is better)
Translates to: SSVICGWNGGSA*FFSSKSQSMLR
Trigger: CCGCAGCATAGACTGGGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000479263.5
ENST00000505322.5
CDS GCA 72 bp ACTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTGCTaGTGGTGCAGACGACACATGTCTCTCACTTCCTCA +
Preference number: 6 (lower is better)
Translates to: TSLSTHLRVSGC*WCRRHMSLTSS
Trigger: TGAGGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468310.5
CDS GCA 72 bp ATAGATTTGTCTTCTCCCGGACATGGCAGGCCAGGCTaGTCAGGGGTGCTCGGGAAAACTTCGCTGTCCACC +
Preference number: 6 (lower is better)
Translates to: IDLSSPGHGRPG*SGVLGKTSLST
Trigger: GGTGGACAGCGAAGTTTTCCCGAGCACCCCTGAGCAGCCTGGCCTGCCATGTCCGGGAGAAGACAAATCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468310.5
CDS CCA 72 bp GTCCAGACCGTAGTCGTCTGTGATCTGTGGCTGGAATaGAGGGAGCGCCTGCTTCTTCTCCAGCAAGTCCCA +
Preference number: 6 (lower is better)
Translates to: VQTVVVCDLWLE*RERLLLLQQVP
Trigger: TGGGACTTGCTGGAGAAGAAGCAGGCGCTCCCTCCATTCCAGCCACAGATCACAGACGACTACGGTCTGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000479263.5
ENST00000505322.5
CDS CCA 72 bp AGGCAGTTCAAGACCAGAGCCCTTCCTAGGGGCATCTaGGCCCAGGTCCTTGATAAGCATCTGTGGCCAACC +
Preference number: 6 (lower is better)
Translates to: RQFKTRALPRGI*AQVLDKHLWPT
Trigger: GGTTGGCCACAGATGCTTATCAAGGACCTGGGCCCAGATGCCCCTAGGAAGGGCTCTGGTCTTGAACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466651.5
CDS CAA 72 bp CTGACCGCAGTACGCTCTCCTGTTAAAGCGCTTGGCTaGGAAGAGGTGGCCGTTGGCACGGTACAGCTTCCT +
Preference number: 6 (lower is better)
Translates to: LTAVRSPVKALG*EEVAVGTVQLP
Trigger: AGGAAGCTGTACCGTGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGAGAGCGTACTGCGGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000419838.6
ENST00000461106.6
ENST00000461465.5
ENST00000466352.5
ENST00000468310.5
ENST00000470511.5
ENST00000470596.5
ENST00000470986.5
ENST00000471018.6
ENST00000481140.5
ENST00000482686.5
ENST00000486681.5
ENST00000495347.5
ENST00000496325.5
ENST00000497183.5
CDS CAA 72 bp GTCGGCGTCCTCGTTCTTGTCGTCTACTGGAGGCTCTaGGGAAGGCATGACAGAATCCTGAGCCTGCTGCCT +
Preference number: 6 (lower is better)
Translates to: VGVLVLVVYWRL*GRHDRILSLLP
Trigger: AGGCAGCAGGCTCAGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479263.5
CDS CAA 90 bp TTCTCCAGCAAGTCCCAGTCTATGCTGCGGAAGAACGCGTGGGACTaGATGTCAGAAAATCCAGTCTGTGGCCGGCAGCCGAGCCTCTCT +
Preference number: 6 (lower is better)
Translates to: FSSKSQSMLRKNAWD*MSENPVCGRQPSLS
Trigger: AGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGCTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000479263.5
ENST00000505322.5
CDS TCA 72 bp AGTCCCAGTCTATGCTGCGGAAGAACGCGTGGGACTTaGTGTCAGAAAATCCAGTCTGTGGCCGGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: SPSLCCGRTRGT*CQKIQSVAGSR
Trigger: TCGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000478770.6
ENST00000479263.5
ENST00000505322.5
CDS TCA 72 bp TTTCAGATCTGCTGTGCTGGCGACAACGCAGGGCTCTaGCAGTCCATGTGCTGGAAGGAGGTGCATCGGGAA +
Preference number: 6 (lower is better)
Translates to: FQICCAGDNAGL*QSMCWKEVHRE
Trigger: TTCCCGATGCACCTCCTTCCAGCACATGGACTGTCAGAGCCCTGCGTTGTCGCCAGCACAGCAGATCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470511.5
CDS GCA 72 bp AAAACTTCGCTGTCCACCCACTTGAGGGTGAGCGGGTaGTGCTGGTGCAGACGACACATGTCTCTCACTTCC +
Preference number: 6 (lower is better)
Translates to: KTSLSTHLRVSG*CWCRRHMSLTS
Trigger: GGAAGTGAGAGACATGTGTCGTCTGCACCAGCAGCACCCGCTCACCCTCAAGTGGGTGGACAGCGAAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468310.5
CDS GCA 72 bp GTAGGCCTGACTTGTCCCCTCGGGGGATGCTCTGCCTaGCCAACAACCCTCTCTGAAGAGAGAAAGAAAGAG +
Preference number: 6 (lower is better)
Translates to: VGLTCPLGGCSA*PTTLSEERKKE
Trigger: CTCTTTCTTTCTCTCTTCAGAGAGGGTTGTTGGGCAGGCAGAGCATCCCCCGAGGGGACAAGTCAGGCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471018.6
CDS CCA 72 bp GGAAGGAAGGTCGGCGTCCTCGTTCTTGTCGTCTACTaGAGGCTCTTGGGAAGGCATGACAGAATCCTGAGC +
Preference number: 6 (lower is better)
Translates to: GRKVGVLVLVVY*RLLGRHDRILS
Trigger: GCTCAGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479263.5
CDS CAA 72 bp AAGTCCCAGTCTATGCTGCGGAAGAACGCGTGGGACTaGATGTCAGAAAATCCAGTCTGTGGCCGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: KSQSMLRKNAWD*MSENPVCGRQP
Trigger: CGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000478770.6
ENST00000479263.5
ENST00000505322.5
CDS CAA 90 bp GGCGCCAACAAGTTTAATTCCACAGCTTTAAGTCTCCCCACAGAATaGGCTGAGCACACTCCGCACACAGAGGCTGCCCTGGCGAAGTCC +
Preference number: 6 (lower is better)
Translates to: GANKFNSTALSLPTE*AEHTPHTEAALAKS
Trigger: GGACTTCGCCAGGGCAGCCTCTGTGTGCGGAGTGTGCTCAGCCAATTCTGTGGGGAGACTTAAAGCTGTGGAATTAAACTTGTTGGCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484419.1
CDS CCA 72 bp GAACGCGTGGGACTTGATGTCAGAAAATCCAGTCTGTaGCCGGCAGCCGAGCCTCTCTTTGGGGTCCTTATT +
Preference number: 6 (lower is better)
Translates to: ERVGLDVRKSSL*PAAEPLFGVLI
Trigger: AATAAGGACCCCAAAGAGAGGCTCGGCTGCCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000478770.6
ENST00000479263.5
ENST00000505322.5
CDS CCA 72 bp TCCAGCAAGTCCCAGTCTATGCTGCGGAAGAACGCGTaGGACTTGATGTCAGAAAATCCAGTCTGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: SSKSQSMLRKNA*DLMSENPVCGR
Trigger: CCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000479263.5
ENST00000505322.5
CDS CAA 90 bp ACTACCAGACTTCACTCTGTCTACGGCAGCCGGGTAGCCGGCAACTaGAAAGAGGTGATTTGCCAAGTCCATCTTGAACAGCCGCTCTGG +
Preference number: 6 (lower is better)
Translates to: TTRLHSVYGSRVAGN*KEVICQVHLEQPLW
Trigger: CCAGAGCGGCTGTTCAAGATGGACTTGGCAAATCACCTCTTTCAAGTTGCCGGCTACCCGGCTGCCGTAGACAGAGTGAAGTCTGGTAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS TCA 72 bp CTGCAGACGGAGGTGGCCACTCGGTACTGCAGGCCATaGCCTTTCCACCAAGTGCTTTATACAACGGGATAT +
Preference number: 6 (lower is better)
Translates to: LQTEVATRYCRP*PFHQVLYTTGY
Trigger: ATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTGCAGTACCGAGTGGCCACCTCCGTCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000478770.6
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS CCA 72 bp AACACCAAGTCCCAGTCTATGCTGCGGAAGAACGCGTaGGACTTGATGTCAGAAAATCCAGTCTGTGGCCGG +
Preference number: 6 (lower is better)
Translates to: NTKSQSMLRKNA*DLMSENPVCGR
Trigger: CCGGCCACAGACTGGATTTTCTGACATCAAGTCCCACGCGTTCTTCCGCAGCATAGACTGGGACTTGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS CCA 72 bp GGCTCCCCGGCGGTAGATAGATTCAGCCTCACATCATaGTCCAGGTTTCACTTTCACGGTGCAGATTCCAGA +
Preference number: 6 (lower is better)
Translates to: GSPAVDRFSLTS*SRFHFHGADSR
Trigger: TCTGGAATCTGCACCGTGAAAGTGAAACCTGGACCATGATGTGAGGCTGAATCTATCTACCGCCGGGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495347.5
CDS CAA 72 bp TGCTTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATaGTGGGGACACAAGATGCCCCCTTCATTCATCAGT +
Preference number: 6 (lower is better)
Translates to: CFFSSCGVRTAG*WGHKMPPSFIS
Trigger: ACTGATGAATGAAGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS CAA 90 bp GCAATTCCATCTGTCTCCTCGGAAGGAAGGTCGGCGTCCTCGTTCTaGTCGTCTACTGGAGGCTCTTGGGAAGGCATGACAGAATCCTAT +
Preference number: 6 (lower is better)
Translates to: AIPSVSSEGRSASSF*SSTGGSWEGMTESY
Trigger: ATAGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGACGACAAGAACGAGGACGCCGACCTTCCTTCCGAGGAGACAGATGGAATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000478770.6
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS GCA 72 bp TTGCACAATGCTTGGTCATCTCCCCTGTCCCAAAGCTaGATCCTGTCAGTAACCAAGCATCAGGGGGCCATT +
Preference number: 6 (lower is better)
Translates to: LHNAWSSPLSQS*ILSVTKHQGAI
Trigger: AATGGCCCCCTGATGCTTGGTTACTGACAGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000486681.5
ENST00000503672.1
CDS CCA 72 bp TTCTTCTCCAGCTGTGGTGTGCGCACAGCAGGATTGTaGGGACACAAGATGCCCCCTTCATTCATCAGTTAC +
Preference number: 6 (lower is better)
Translates to: FFSSCGVRTAGL*GHKMPPSFISY
Trigger: GTAACTGATGAATGAAGGGGGCATCTTGTGTCCCCACAATCCTGCTGTGCGCACACCACAGCTGGAGAAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478770.6
CDS CAA 72 bp CTTCACTCTGTCTACGGCAGCCGGGTAGCCGGCAACTaGAAAGAGGTGATTTGCCAAGTCCATCTTGAACAG +
Preference number: 6 (lower is better)
Translates to: LHSVYGSRVAGN*KEVICQVHLEQ
Trigger: CTGTTCAAGATGGACTTGGCAAATCACCTCTTTCAAGTTGCCGGCTACCCGGCTGCCGTAGACAGAGTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481140.5
CDS CCA 72 bp AGCATCTGTGGCCAACCTCTTTCCCACCATCCCCACTaGGGAAAAGTTGGCGCCAACAAGTTTAATTCCACA +
Preference number: 6 (lower is better)
Translates to: SICGQPLSHHPH*GKVGANKFNST
Trigger: TGTGGAATTAAACTTGTTGGCGCCAACTTTTCCCCAGTGGGGATGGTGGGAAAGAGGTTGGCCACAGATGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484419.1
CDS CAA 90 bp GCAGGCCATGACCTTTCCACCAAGTGCTTTATACAACGGGATATTTaGCACAATGCTTGGTCATCTCCCCTGTCCCAAAGCTGCATCCTG +
Preference number: 6 (lower is better)
Translates to: AGHDLSTKCFIQRDI*HNAWSSPLSQSCIL
Trigger: CAGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000486681.5
ENST00000503672.1
CDS TCA 72 bp CCGTACAGCAACTGGGAGAACCTTACAGGTGACAGTTaGCACATCACACCAGACTTAGCTTCTGTGCAGTTC +
Preference number: 6 (lower is better)
Translates to: PYSNWENLTGDS*HITPDLASVQF
Trigger: GAACTGCACAGAAGCTAAGTCTGGTGTGATGTGTCAACTGTCACCTGTAAGGTTCTCCCAGTTGCTGTACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS CAA 90 bp GCAGGCCATGACCTTTCCACCAAGTGCTTTATACAACGGGATATTTaGCACAATGCTTGGTCATCTCCCCTGTCCCAAAGCTGCATCCAT +
Preference number: 6 (lower is better)
Translates to: AGHDLSTKCFIQRDI*HNAWSSPLSQSCIH
Trigger: ATGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497183.5
CDS TCA 72 bp CTCCGAGTCGTCTTTAATGCTGTCATGCTTCCGGGATaGGGAAATGTAAGCAACATATGCTTCCTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: LRVVFNAVMLPG*GNVSNICFLQV
Trigger: GACCTGCAGGAAGCATATGTTGCTTACATTTCCTCATCCCGGAAGCATGACAGCATTAAAGACGACTCGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419838.6
CDS TCA 72 bp AGCCAGGTGGGAAGTGGCATCCCGGTTTCGCAGACATaGTCGTATGATTTTAAAAGATCCGCAGATGTCATC +
Preference number: 6 (lower is better)
Translates to: SQVGSGIPVSQT*SYDFKRSADVI
Trigger: GATGACATCTGCGGATCTTTTAAAATCATACGATCATGTCTGCGAAACCGGGATGCCACTTCCCACCTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505322.5
CDS GCA 72 bp CCACTCGGTACTGCAGGCCATGACCTTTCCACCAAGTaGTTTATACAACGGGATATTTTGCACAATGCTTGG +
Preference number: 6 (lower is better)
Translates to: PLGTAGHDLSTK*FIQRDILHNAW
Trigger: CCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTCATGGCCTGCAGTACCGAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478770.6
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS CCA 72 bp CAGAAATACCCTTCTTTTTCTTACCGACTTGTCGTCTaGAAGCAGGAGTGTAATCCGACCAGGAAGGGGTTG +
Preference number: 6 (lower is better)
Translates to: QKYPSFSYRLVV*KQECNPTRKGL
Trigger: CAACCCCTTCCTGGTCGGATTACACTCCTGCTTCCAGACGACAAGTCGGTAAGAAAAAGAAGGGTATTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS CAA 90 bp GTCATCATGCACCAGCTCTTTCTTCACCACTTTCATGGCGTAAATTaGGTCATTCTTCTTCAACCGCACCAGGAGAACCTTGGCGTAGCT +
Preference number: 6 (lower is better)
Translates to: VIMHQLFLHHFHGVN*VILLQPHQENLGVA
Trigger: AGCTACGCCAAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCAAATTTACGCCATGAAAGTGGTGAAGAAAGAGCTGGTGCATGATGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000470986.5
ENST00000478770.6
ENST00000479263.5
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS CAA 90 bp CCTTTCCACCAAGTGCTTTATACAACGGGATATTTTGCACAATGCTaGGTCATCTCCCCTGTCCCAAAGCTGCATCCATATGCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: PFHQVLYTTGYFAQC*VISPVPKLHPYASC
Trigger: GCAGGAAGCATATGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497183.5
CDS CAA 90 bp CCTTTCCACCAAGTGCTTTATACAACGGGATATTTTGCACAATGCTaGGTCATCTCCCCTGTCCCAAAGCTGCATCCTGTCAGTAACCAA +
Preference number: 6 (lower is better)
Translates to: PFHQVLYTTGYFAQC*VISPVPKLHPVSNQ
Trigger: TTGGTTACTGACAGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486681.5
ENST00000503672.1
CDS TCA 72 bp AAAACACCCGTACAGCAACTGGGAGAACCTTACAGGTaGCAGTTGACACATCACACCAGACTTAGCTTCTGT +
Preference number: 6 (lower is better)
Translates to: KTPVQQLGEPYR*QLTHHTRLSFC
Trigger: ACAGAAGCTAAGTCTGGTGTGATGTGTCAACTGTCACCTGTAAGGTTCTCCCAGTTGCTGTACGGGTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS GCA 72 bp CACCAAGTGCTTTATACAACGGGATATTTTGCACAATaGTTGGTCATCTCCCCTGTCCCAAAGCTGCATCCT +
Preference number: 6 (lower is better)
Translates to: HQVLYTTGYFAQ*LVISPVPKLHP
Trigger: AGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000478770.6
ENST00000486681.5
ENST00000503672.1
CDS GCA 72 bp CACCAAGTGCTTTATACAACGGGATATTTTGCACAATaGTTGGTCATCTCCCCTGTCCCAAAGCTGCATCCA +
Preference number: 6 (lower is better)
Translates to: HQVLYTTGYFAQ*LVISPVPKLHP
Trigger: TGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497183.5
CDS CAA 72 bp GACCTTTCCACCAAGTGCTTTATACAACGGGATATTTaGCACAATGCTTGGTCATCTCCCCTGTCCCAAAGC +
Preference number: 6 (lower is better)
Translates to: DLSTKCFIQRDI*HNAWSSPLSQS
Trigger: GCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000478770.6
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS CAA 72 bp CAAGTGCTTTATACAACGGGATATTTTGCACAATGCTaGGTCATCTCCCCTGTCCCAAAGCTGCATCCTGTC +
Preference number: 6 (lower is better)
Translates to: QVLYTTGYFAQC*VISPVPKLHPV
Trigger: GACAGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486681.5
ENST00000503672.1
CDS GCA 72 bp ACCTTTCCACCAAGTGCTTTATACAACGGGATATTTTaGACAATGCTTGGTCATCTCCCCTGTCCCAAAGCT +
Preference number: 6 (lower is better)
Translates to: TFPPSALYNGIF*TMLGHLPCPKA
Trigger: AGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTGGTGGAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000478770.6
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS CCA 72 bp AAGTGCTTTATACAACGGGATATTTTGCACAATGCTTaGTCATCTCCCCTGTCCCAAAGCTGCATCCTGTCA +
Preference number: 6 (lower is better)
Translates to: KCFIQRDILHNA*SSPLSQSCILS
Trigger: TGACAGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000486681.5
ENST00000503672.1
CDS CAA 72 bp CACCAGCTCTTTCTTCACCACTTTCATGGCGTAAATTaGGTCATTCTTCTTCAACCGCACCAGGAGAACCTT +
Preference number: 6 (lower is better)
Translates to: HQLFLHHFHGVN*VILLQPHQENL
Trigger: AAGGTTCTCCTGGTGCGGTTGAAGAAGAATGACCAAATTTACGCCATGAAAGTGGTGAAGAAAGAGCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000378567.8
ENST00000400921.6
ENST00000461106.6
ENST00000470986.5
ENST00000478770.6
ENST00000479263.5
ENST00000486681.5
ENST00000497183.5
ENST00000503672.1
CDS CAA 90 bp GATCCCAGCAGTCCTCCTAGCCAATCATCGAACCTGGGGATGGTCTaGAGGACTCAATGCAGAACATACTTAATAACTCTTCAAATAAAC +
Preference number: 6 (lower is better)
Translates to: DPSSPPSQSSNLGMV*RTQCRTYLITLQIN
Trigger: GTTTATTTGAAGAGTTATTAAGTATGTTCTGCATTGAGTCCTCAAGACCATCCCCAGGTTCGATGATTGGCTAGGAGGACTGCTGGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS CCA 72 bp AAGTGCTTTATACAACGGGATATTTTGCACAATGCTTaGTCATCTCCCCTGTCCCAAAGCTGCATCCATATG +
Preference number: 6 (lower is better)
Translates to: KCFIQRDILHNA*SSPLSQSCIHM
Trigger: CATATGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497183.5
CDS CAA 72 bp CAAGTGCTTTATACAACGGGATATTTTGCACAATGCTaGGTCATCTCCCCTGTCCCAAAGCTGCATCCATAT +
Preference number: 6 (lower is better)
Translates to: QVLYTTGYFAQC*VISPVPKLHPY
Trigger: ATATGGATGCAGCTTTGGGACAGGGGAGATGACCAAGCATTGTGCAAAATATCCCGTTGTATAAAGCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497183.5
CDS CAA 72 bp CAGAATATCAGAAATACCCTTCTTTTTCTTACCGACTaGTCGTCTGGAAGCAGGAGTGTAATCCGACCAGGA +
Preference number: 6 (lower is better)
Translates to: QNIRNTLLFLTD*SSGSRSVIRPG
Trigger: TCCTGGTCGGATTACACTCCTGCTTCCAGACGACAAGTCGGTAAGAAAAAGAAGGGTATTTCTGATATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS GCA 72 bp CCAGACTTAGCTTCTGTGCAGTTCACATCTGAAATCTaGAGAATATCAGAAATACCCTTCTTTTTCTTACCG +
Preference number: 6 (lower is better)
Translates to: PDLASVQFTSEI*RISEIPFFFLP
Trigger: CGGTAAGAAAAAGAAGGGTATTTCTGATATTCTGCAGATTTCAGATGTGAACTGCACAGAAGCTAAGTCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503672.1
CDS TCA 72 bp CATCACACCAGACTTAGCTTCTGTGCAGTTCACATCTaGAATCTGCAGAATATCAGAAATACCCTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: HHTRLSFCAVHI*NLQNIRNTLLF
Trigger: AAAAAGAAGGGTATTTCTGATATTCTGCAGATTTCAGATGTGAACTGCACAGAAGCTAAGTCTGGTGTGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503672.1