RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKCQ (Homo sapiens)

Ensembl gene IDs: ENSG00000065675

Ensembl transcript IDs: ENST00000263125.10, ENST00000397176.6, ENST00000539722.5, ENST00000610727.1

Found 504 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGACGTCTGTACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTaGTCAGCAGTTGGCGCCCAGGTGAAGAGCCATAATTTATTGCAG +
Preference number: 1 (lower is better)
Translates to: ETSVLRLPLIQQAFH*SAVGAQVKSHNLLQ
Trigger: CTGCAATAAATTATGGCTCTTCACCTGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGTACAGACGTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR TCA 90 bp AAGGTTTTTACTGGCAAGGGTGAAATGATACTATCTTTTCTATCTTaGCAAGATAACAAGCGAAGGTGTCTAGCAAACCTTCCCTCTCAC +
Preference number: 1 (lower is better)
Translates to: KVFTGKGEMILSFLS*QDNKRRCLANLPSH
Trigger: GTGAGAGGGAAGGTTTGCTAGACACCTTCGCTTGTTATCTTGTCAAGATAGAAAAGATAGTATCATTTCACCCTTGCCAGTAAAAACCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGCCAAGCAGTGTCTCTTaGACCAGTTCCCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLPSSVS*TSSQGE
Trigger: TTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGG...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCCAGTTGGCGCCCAGGTaGAGAGCCATAATTTATTGC +
Preference number: 2 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSQLAPR*RAIIYC
Trigger: GCAATAAATTATGGCTCTTCACCTGGGCGCCAACTG...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCCAGATAAAAGTCACATaGGGGCGAACGGGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSQIKVT*GRTGLS
Trigger: ACTGAGACCCGTTCGCCCCCATGTGACTTTTATCTG...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCTTCAGGAGCGTCTGTaGGACATGTCAGGAGACGAG +
Preference number: 2 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYLQERL*DMSGDE
Trigger: CTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACTTCAGGAGCGTCTGTaGGACATGTCAGGAGACGAG +
Preference number: 2 (lower is better)
Translates to: HQSWHEKGLRFFSQETYALQERL*DMSGDE
Trigger: CTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTGCAGTATCAAGTCTTaGAACCTTTCCAAGTGCGGA +
Preference number: 2 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLCSIKS*NLSKCG
Trigger: TCCGCACTTGGAAAGGTTTCAAGACTTGATACTGCA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAGGGCCGTTTCAGTCTTaGGACGTCTGTACTCCGTTT +
Preference number: 2 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRGPFQS*DVCTPF
Trigger: AAACGGAGTACAGACGTCTCAAGACTGAAACGGCCC...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATTGTCTGCGGCTGAGTaGGATCCGCTACTAGACCAG +
Preference number: 2 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGLSAAE*DPLLDQ
Trigger: CTGGTCTAGTAGCGGATCTCACTCAGCCGCAGACAA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACCAAGCAGTGTCTCTTaGACCAGTTCCCAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGPSSVS*TSSQGE
Trigger: TTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCAGTTGGCGCCCAGGTaGAGAGCCATAATTTATTGC +
Preference number: 2 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYQLAPR*RAIIYC
Trigger: GCAATAAATTATGGCTCTTCACCTGGGCGCCAACTG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACAACAAGCATTTCATTaGTCAGCAGTTGGCGCCCAG +
Preference number: 2 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAQQAFH*SAVGAQ
Trigger: CTGGGCGCCAACTGCTGATCAATGAAATGCTTGTTG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAGAGAATGGCAGTGAGTaGCTGTGCCAATACTGGAGT +
Preference number: 2 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRENGSE*LCQYWS
Trigger: ACTCCAGTATTGGCACAGTCACTCACTGCCATTCTC...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAGAGAATGGCAGTGAGTaGCTGTGCCAATACTGGAGT +
Preference number: 2 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAENGSE*LCQYWS
Trigger: ACTCCAGTATTGGCACAGTCACTCACTGCCATTCTC...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACAGATAAAAGTCACATaGGGGCGAACGGGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRQIKVT*GRTGLS
Trigger: ACTGAGACCCGTTCGCCCCCATGTGACTTTTATCTG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATCATTGATCAGCAGTTaGCGCCCAGGTGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGSLISS*RPGEEP
Trigger: TGGCTCTTCACCTGGGCGCCAACTGCTGATCAATGA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR CAA 90 bp ATGTCAGGAGACGAGACACACGGCATCGTCATTAGTGAAGTAGACTaGGTTTCTGCTACAGATAAAAGTCACATGGGGGCGAACGGGTCT +
Preference number: 2 (lower is better)
Translates to: MSGDETHGIVISEVD*VSATDKSHMGANGS
Trigger: AGACCCGTTCGCCCCCATGTGACTTTTATCTGTAGCAGAAACCAAGTCTACTTCACTAATGACGATGCCGTGTGTCTCGTCTCCTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTTCCACTTGTCCTCTTaGCCATGGATTTCATGCCCA +
Preference number: 2 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYFHLSS*PWISCP
Trigger: TGGGCATGAAATCCATGGTCAAGAGGACAAGTGGAA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAAATACTGGAGTCTGCTaGGAATGGGTGGATGGAAAG +
Preference number: 2 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRNTGVC*EWVDGK
Trigger: CTTTCCATCCACCCATTCTCAGCAGACTCCAGTATT...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATGCAGTATCAAGTCTTaGAACCTTTCCAAGTGCGGA +
Preference number: 2 (lower is better)
Translates to: HQSWHEKGLRFFSQETYACSIKS*NLSKCG
Trigger: TCCGCACTTGGAAAGGTTTCAAGACTTGATACTGCA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACTTCAGGAGCGTCTGTaGGACATGTCAGGAGACGAG +
Preference number: 2 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQLQERL*DMSGDE
Trigger: CTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATGCAGTATCAAGTCTTaGAACCTTTCCAAGTGCGGA +
Preference number: 2 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGCSIKS*NLSKCG
Trigger: TCCGCACTTGGAAAGGTTTCAAGACTTGATACTGCA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR CAA 90 bp CGAAGGTGTCTAGCAAACCTTCCCTCTCACTTTCCACTTGTCCTCTaGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGA +
Preference number: 2 (lower is better)
Translates to: RRCLANLPSHFPLVL*TMDFMPNQDEWICR
Trigger: TCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAGGACAAGTGGAAAGTGAGAGGGAAGGTTTGCTAGACACCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGGGCCGTTTCAGTCTTaGGACGTCTGTACTCCGTTT +
Preference number: 2 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQGPFQS*DVCTPF
Trigger: AAACGGAGTACAGACGTCTCAAGACTGAAACGGCCC...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTTTGTCTGCGGCTGAGTaGGATCCGCTACTAGACCAG +
Preference number: 2 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVLSAAE*DPLLDQ
Trigger: CTGGTCTAGTAGCGGATCTCACTCAGCCGCAGACAA...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATCATTGATCAGCAGTTaGCGCCCAGGTGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQSLISS*RPGEEP
Trigger: TGGCTCTTCACCTGGGCGCCAACTGCTGATCAATGA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACAACAAGCATTTCATTaGTCAGCAGTTGGCGCCCAG +
Preference number: 2 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQQQAFH*SAVGAQ
Trigger: CTGGGCGCCAACTGCTGATCAATGAAATGCTTGTTG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCTGGCAAGGGTGAAATaGTACTATCTTTTCTATCTT +
Preference number: 2 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYLARVK*YYLFYL
Trigger: AAGATAGAAAAGATAGTATCATTTCACCCTTGCCAG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCAACAAGCATTTCATTaGTCAGCAGTTGGCGCCCAG +
Preference number: 2 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVQQAFH*SAVGAQ
Trigger: CTGGGCGCCAACTGCTGATCAATGAAATGCTTGTTG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCAGATAAAAGTCACATaGGGGCGAACGGGTCTCAGT +
Preference number: 2 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVQIKVT*GRTGLS
Trigger: ACTGAGACCCGTTCGCCCCCATGTGACTTTTATCTG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCCCCAAGCAGTGTCTCTaGAACCAGTTCCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSPKQCL*NQFPGR
Trigger: TCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGG...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR TCA 72 bp CCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTaGGACGTCTGTACTCCGTTTGCCCCTGATTCAACA +
Preference number: 3 (lower is better)
Translates to: PLLDQAMGPFQS*DVCTPFAPDST
Trigger: TGTTGAATCAGGGGCAAACGGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCCCAAGCAGTGTCTCTaGAACCAGTTCCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRPKQCL*NQFPGR
Trigger: TCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACCCAAGCAGTGTCTCTaGAACCAGTTCCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRPKQCL*NQFPGR
Trigger: TCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACCCAAGCAGTGTCTCTaGAACCAGTTCCCAGGGAGA +
Preference number: 3 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAPKQCL*NQFPGR
Trigger: TCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAGGGGCCGTTTCAGTCTaGAGACGTCTGTACTCCGTT +
Preference number: 3 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAGAVSV*RRLYSV
Trigger: AACGGAGTACAGACGTCTCAAGACTGAAACGGCCCC...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAGGGGCCGTTTCAGTCTaGAGACGTCTGTACTCCGTT +
Preference number: 3 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRGAVSV*RRLYSV
Trigger: AACGGAGTACAGACGTCTCAAGACTGAAACGGCCCC...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAACGTCTGTACTCCGTTaGCCCCTGATTCAACAAGCA +
Preference number: 3 (lower is better)
Translates to: HQSWHEKGLRFFSQETYATSVLR*PLIQQA
Trigger: TGCTTGTTGAATCAGGGGCAAACGGAGTACAGACGT...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR TCA 72 bp ATAAAACGGGTTAGTGATTACTTGTCTGCGGCTGAGTaGGATCCGCTACTAGACCAGGCAATGGGGCCGTTT +
Preference number: 3 (lower is better)
Translates to: IKRVSDYLSAAE*DPLLDQAMGPF
Trigger: AAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCACTCAGCCGCAGACAAGTAATCACTAACCCGTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATCAACAAGCATTTCATaGATCAGCAGTTGGCGCCCA +
Preference number: 3 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRSTSIS*ISSWRP
Trigger: TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR TCA 72 bp ATCTTGAATGATGCCTACGGAGGGGCTTATGAGTCATaGAATCACCAGTCATGGCACGAGAAGGGGTTAAGG +
Preference number: 3 (lower is better)
Translates to: ILNDAYGGAYES*NHQSWHEKGLR
Trigger: CCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCATTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATTGCAGTATCAAGTCTaGAAACCTTTCCAAGTGCGG +
Preference number: 3 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGLQYQV*KPFQVR
Trigger: CCGCACTTGGAAAGGTTTCAAGACTTGATACTGCAA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGGGGCCGTTTCAGTCTaGAGACGTCTGTACTCCGTT +
Preference number: 3 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQGAVSV*RRLYSV
Trigger: AACGGAGTACAGACGTCTCAAGACTGAAACGGCCCC...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATCAACAAGCATTTCATaGATCAGCAGTTGGCGCCCA +
Preference number: 3 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQSTSIS*ISSWRP
Trigger: TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR TCA 72 bp ACTGGCAAGGGTGAAATGATACTATCTTTTCTATCTTaGCAAGATAACAAGCGAAGGTGTCTAGCAAACCTT +
Preference number: 3 (lower is better)
Translates to: TGKGEMILSFLS*QDNKRRCLANL
Trigger: AAGGTTTGCTAGACACCTTCGCTTGTTATCTTGTCAAGATAGAAAAGATAGTATCATTTCACCCTTGCCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCGACATGGTTGCGCCCTaGAGCGAGCACGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSDMVAP*SEHGAA
Trigger: AGCGGCGCCGTGCTCGCTCCAGGGCGCAACCATGTC...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR GCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTGGTGGACCTTTGCCTaGTTGATGGCACCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSWWTFA*LMAPRR
Trigger: GCGCCGGGGTGCCATCAAGCAGGCAAAGGTCCACCA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTTAACAGCCTCGCCCTaGCAAGACTGGCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSLTASP*QDWQDP
Trigger: CGGGTCCTGCCAGTCTTGTCAGGGCGAGGCTGTTAA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR GCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGAAATGGCGACATGGTTaGGCCCTGGAGCGAGCACGG +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLKWRHG*ALERAR
Trigger: CCGTGCTCGCTCCAGGGCGCAACCATGTCGCCATTT...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGACATGGTTGCGCCCTaGAGCGAGCACGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSDMVAP*SEHGAA
Trigger: AGCGGCGCCGTGCTCGCTCCAGGGCGCAACCATGTC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGACATGGTTGCGCCCTaGAGCGAGCACGGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPDMVAP*SEHGAA
Trigger: AGCGGCGCCGTGCTCGCTCCAGGGCGCAACCATGTC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTGCTCTGTCGGCAAATaGCAGCCGGGGCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLCSVGK*QPGLLV
Trigger: AACGAGAAGCCCCGGCTGTCATTTGCCGACAGAGCA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTGCTCTGTCGGCAAATaGCAGCCGGGGCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSCSVGK*QPGLLV
Trigger: AACGAGAAGCCCCGGCTGTCATTTGCCGACAGAGCA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTGGTGGACCTTTGCCTaGTTGATGGCACCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRWWTFA*LMAPRR
Trigger: GCGCCGGGGTGCCATCAAGCAGGCAAAGGTCCACCA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTCACACTTGAGTCCTTaGCGTGCCAGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLSHLSP*RASPHS
Trigger: GCTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCGAAGAAATGGCGACATaGTTGCGCCCTGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSEEMAT*LRPGAS
Trigger: GCTCGCTCCAGGGCGCAACCATGTCGCCATTTCTTC...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGGACCTTTGCCTGCTTaGTGGCACCCCGGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPGPLPA*WHPGAD
Trigger: ATCAGCGCCGGGGTGCCATCAAGCAGGCAAAGGTCC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATGGACCTTTGCCTGCTTaGTGGCACCCCGGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYGPLPA*WHPGAD
Trigger: ATCAGCGCCGGGGTGCCATCAAGCAGGCAAAGGTCC...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCCACATGCATCACACTTaGGTCCTTGCCGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSHMHHT*VLAVPV
Trigger: GACTGGCACGGCAAGGACTCAAGTGTGATGCATGTG...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCCCAGGAAATGCCCTaGGGCTCTCTTTTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSQEMP*GSLFPG
Trigger: ACCGGGAAAAAGAGAGCCTCAGGGCATTTCCTGGGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTCCCAGGAAATGCCCTaGGGCTCTCTTTTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLSQEMP*GSLFPG
Trigger: ACCGGGAAAAAGAGAGCCTCAGGGCATTTCCTGGGA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTTGTCTGCGGCTGAGTaGGATCCGCTACTAGACCAG +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSLSAAE*DPLLDQ
Trigger: CTGGTCTAGTAGCGGATCTCACTCAGCCGCAGACAA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATGGTGGACCTTTGCCTaGTTGATGGCACCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPWWTFA*LMAPRR
Trigger: GCGCCGGGGTGCCATCAAGCAGGCAAAGGTCCACCA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTGGTGGACCTTTGCCTaGTTGATGGCACCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYWWTFA*LMAPRR
Trigger: GCGCCGGGGTGCCATCAAGCAGGCAAAGGTCCACCA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCCATGCGGATGGAGTaGAAGAGCTCCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSMRME*KSSSSS
Trigger: GGATGAGGAGGAGCTCTTCCACTCCATCCGCATGGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTTTCGGCCGGAACGGTaGGTCAATCTCCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSFRPER*VNLLPF
Trigger: GAACGGAAGGAGATTGACCCACCGTTCCGGCCGAAA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATTAACAGCCTCGCCCTaGCAAGACTGGCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPLTASP*QDWQDP
Trigger: CGGGTCCTGCCAGTCTTGTCAGGGCGAGGCTGTTAA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTTAACAGCCTCGCCCTaGCAAGACTGGCAGGACCCG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSLTASP*QDWQDP
Trigger: CGGGTCCTGCCAGTCTTGTCAGGGCGAGGCTGTTAA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGATGGCACCCCGGCGCTaGTGCAAAGCAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRMAPRR*CKAKKP
Trigger: AGGCTTCTTTGCTTTGCATCAGCGCCGGGGTGCCAT...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCAAATGGCGACATGGTTaGGCCCTGGAGCGAGCACGG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSKWRHG*ALERAR
Trigger: CCGTGCTCGCTCCAGGGCGCAACCATGTCGCCATTT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR GCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCGACGTGGTGGACCTTTaGCTGCTTGATGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFDVVDL*LLDGTP
Trigger: CGGGGTGCCATCAAGCAGGCAAAGGTCCACCACGTC...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACTTGAGTCCTTGCCGTaGCAGTCCCCACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYALESLP*QSPQQG
Trigger: ACCCTGCTGTGGGGACTGGCACGGCAAGGACTCAAG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACTTGAGTCCTTGCCGTaGCAGTCCCCACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPLESLP*QSPQQG
Trigger: ACCCTGCTGTGGGGACTGGCACGGCAAGGACTCAAG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTGCGTCAGAAACGGATaGTCCCAGGCCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLCVRNG*SQAKER
Trigger: TCTTTCCTTGGCCTGGGAGCATCCGTTTCTGACGCA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTGGCACTTGACGTGGTaGACCTTTGCCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLWHLTW*TFACLM
Trigger: CATCAAGCAGGCAAAGGTCCACCACGTCAAGTGCCA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCATTGATCAGCAGTTaGCGCCCAGGTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSLISS*RPGEEP
Trigger: TGGCTCTTCACCTGGGCGCCAACTGCTGATCAATGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATATGGCACCCCGGCGCTaGTGCAAAGCAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYMAPRR*CKAKKP
Trigger: AGGCTTCTTTGCTTTGCATCAGCGCCGGGGTGCCAT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCATGGCACCCCGGCGCTaGTGCAAAGCAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSMAPRR*CKAKKP
Trigger: AGGCTTCTTTGCTTTGCATCAGCGCCGGGGTGCCAT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCACATGCATCACACTTaGGTCCTTGCCGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRHMHHT*VLAVPV
Trigger: GACTGGCACGGCAAGGACTCAAGTGTGATGCATGTG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTGCTCTGTCGGCAAATaGCAGCCGGGGCTTCTCGTT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSCSVGK*QPGLLV
Trigger: AACGAGAAGCCCCGGCTGTCATTTGCCGACAGAGCA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGCAACAAGCATTTCATTaGTCAGCAGTTGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLQQAFH*SAVGAQ
Trigger: CTGGGCGCCAACTGCTGATCAATGAAATGCTTGTTG...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGGCCATTGATCTTGAATaGTGCCTACGGAGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLAIDLE*CLRRGL
Trigger: TAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGC...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTATGGGCATCAAAAGTaGTGTCCCAGGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLYGHQK*CPRVGT
Trigger: TGTACCCACCCTGGGACAGCACTTTTGATGCCCATA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACGTGGTGGACCTTTaGCTGCTTGATGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGDVVDL*LLDGTP
Trigger: CGGGGTGCCATCAAGCAGGCAAAGGTCCACCACGTC...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACTTGAGTCCTTGCCGTaGCAGTCCCCACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGLESLP*QSPQQG
Trigger: ACCCTGCTGTGGGGACTGGCACGGCAAGGACTCAAG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTCACACTTGAGTCCTTaGCGTGCCAGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSSHLSP*RASPHS
Trigger: GCTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATCACACTTGAGTCCTTaGCGTGCCAGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYASHLSP*RASPHS
Trigger: GCTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCACCAGAAGGTCCTTTaGTTCCTTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRHQKVL*FLLQPP
Trigger: CGGTGGCTGGAGAAGGAAGCAAAGGACCTTCTGGTG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTCCCGAAACAAAGGGTaGTGGCGGATGTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFSRNKG*WRMSPL
Trigger: GAGGGGAGACATCCGCCAGCACCCTTTGTTTCGGGA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATCCCGAAACAAAGGGTaGTGGCGGATGTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRSRNKG*WRMSPL
Trigger: GAGGGGAGACATCCGCCAGCACCCTTTGTTTCGGGA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTCCCGAAACAAAGGGTaGTGGCGGATGTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYSRNKG*WRMSPL
Trigger: GAGGGGAGACATCCGCCAGCACCCTTTGTTTCGGGA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCAGTGCTGTCCCAGGGTaGGTACATGGTAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSAVPG*VHGRLF
Trigger: AAAAAGCCTACCATGTACCCACCCTGGGACAGCACT...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTCGTGGCACTTGACGTaGTGGACCTTTGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRSWHLT*WTFACL
Trigger: CAAGCAGGCAAAGGTCCACCACGTCAAGTGCCACGA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAGTGGCAGTGAACTCGTaGCACTTGACGTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAVAVNS*HLTWWT
Trigger: GGTCCACCACGTCAAGTGCCACGAGTTCACTGCCAC...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCGTGGCAGTGAACTCGTaGCACTTGACGTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFVAVNS*HLTWWT
Trigger: GGTCCACCACGTCAAGTGCCACGAGTTCACTGCCAC...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGTGGCAGTGAACTCGTaGCACTTGACGTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPVAVNS*HLTWWT
Trigger: GGTCCACCACGTCAAGTGCCACGAGTTCACTGCCAC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCAGACAGAGCAAAATGTaGGCTGTGGGAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSRQSKM*AVGRRW
Trigger: CCACCTTCTTCCCACAGCCCACATTTTGCTCTGTCT...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTGGCAGCTTTGGATGTaGTACATTAAGTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSWQLWM*YIKSPP
Trigger: CGGAGGGGACTTAATGTACCACATCCAAAGCTGCCA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCGAAACAAAGGGTGCTaGCGGATGTCTCCCCTCACG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSRNKGC*RMSPLT
Trigger: CGTGAGGGGAGACATCCGCCAGCACCCTTTGTTTCG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAATGGCACCCCGGCGCTaGTGCAAAGCAAAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGMAPRR*CKAKKP
Trigger: AGGCTTCTTTGCTTTGCATCAGCGCCGGGGTGCCAT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCACATGCATCACACTTaGGTCCTTGCCGTGCCAGTC +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYHMHHT*VLAVPV
Trigger: GACTGGCACGGCAAGGACTCAAGTGTGATGCATGTG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATAAGCAGCGAGCCTGTTaGGTGCTCTCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYKQRAC*VLSIMA
Trigger: GGCCATGATTGAGAGCACTCAACAGGCTCGCTGCTT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCAAGCAGCGAGCCTGTTaGGTGCTCTCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSKQRAC*VLSIMA
Trigger: GGCCATGATTGAGAGCACTCAACAGGCTCGCTGCTT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTCCCAGGAAATGCCCTaGGGCTCTCTTTTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSSQEMP*GSLFPG
Trigger: ACCGGGAAAAAGAGAGCCTCAGGGCATTTCCTGGGA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTCTGGTCCATGCTGTTaGTCAGTGCTCTGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRSGPCC*SVLCRQ
Trigger: TTGCCGACAGAGCACTGATCAACAGCATGGACCAGA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCTTCAGGAGCGTCTGTaGGACATGTCAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSLQERL*DMSGDE
Trigger: CTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACTTCAGGAGCGTCTGTaGGACATGTCAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPLQERL*DMSGDE
Trigger: CTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGGGGCCGTTTCAGTCTTaGGACGTCTGTACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRGPFQS*DVCTPF
Trigger: AAACGGAGTACAGACGTCTCAAGACTGAAACGGCCC...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATTGTCTGCGGCTGAGTaGGATCCGCTACTAGACCAG +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYALSAAE*DPLLDQ
Trigger: CTGGTCTAGTAGCGGATCTCACTCAGCCGCAGACAA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATCCCGTTGTTCTTCCTaGACCTCTCAGCCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRSRCSS*TSQPAS
Trigger: ACTCGCTGGCTGAGAGGTGCAGGAAGAACAACGGGA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTCCCGTTGTTCTTCCTaGACCTCTCAGCCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYSRCSS*TSQPAS
Trigger: ACTCGCTGGCTGAGAGGTGCAGGAAGAACAACGGGA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATCCCGTTGTTCTTCCTaGACCTCTCAGCCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPSRCSS*TSQPAS
Trigger: ACTCGCTGGCTGAGAGGTGCAGGAAGAACAACGGGA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATCCCGTTGTTCTTCCTaGACCTCTCAGCCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYASRCSS*TSQPAS
Trigger: ACTCGCTGGCTGAGAGGTGCAGGAAGAACAACGGGA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACACCAGAAGGTCCTTTaGTTCCTTCTCCAGCCACCG +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAHQKVL*FLLQPP
Trigger: CGGTGGCTGGAGAAGGAAGCAAAGGACCTTCTGGTG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGAAGAAATGGCGACATaGTTGCGCCCTGGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGEEMAT*LRPGAS
Trigger: GCTCGCTCCAGGGCGCAACCATGTCGCCATTTCTTC...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATGCCAATCCGAAGAAATaGCGACATGGTTGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYANPKK*RHGCAL
Trigger: CAGGGCGCAACCATGTCGCCATTTCTTCGGATTGGC...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCACCCGCAGTCAAAGTTaGACAAGCCAATCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSTRSQS*TSQSEE
Trigger: TTCTTCGGATTGGCTTGTCCAACTTTGACTGCGGGT...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCCATAAAACGTCGCTCTaGAAAGGTCGAACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSHKTSL*KGRTCG
Trigger: GCCACAAGTTCGACCTTTCCAGAGCGACGTTTTATG...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTCCATGCGGATGGAGTaGAAGAGCTCCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYSMRME*KSSSSS
Trigger: GGATGAGGAGGAGCTCTTCCACTCCATCCGCATGGA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACGAAACAAAGGGTGCTaGCGGATGTCTCCCCTCACG +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGRNKGC*RMSPLT
Trigger: CGTGAGGGGAGACATCCGCCAGCACCCTTTGTTTCG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTTTCGGCCGGAACGGTaGGTCAATCTCCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFFRPER*VNLLPF
Trigger: GAACGGAAGGAGATTGACCCACCGTTCCGGCCGAAA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATTTCGGCCGGAACGGTaGGTCAATCTCCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRFRPER*VNLLPF
Trigger: GAACGGAAGGAGATTGACCCACCGTTCCGGCCGAAA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTCGCACGAAGAGCTCTaGGGCGATGTAGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSSHEEL*GDVVRC
Trigger: ACACCTGACTACATCGCCCCAGAGCTCTTCGTGCGA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397176.6
CDS-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGATTAGCATTCGGCCTTaGGGTTTCAGCTCTAACCAT +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLISIRP*GFSSNH
Trigger: ATGGTTAGAGCTGAAACCTCAAGGCCGAATGCTAAT...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCAAGTTCCTCCCAGTTaGTCTCCCGAAACAAAGGGT +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRQVPPS*SPETKG
Trigger: ACCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATCTGGTCCATGCTGTTaGTCAGTGCTCTGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRSGPCC*SVLCRQ
Trigger: TTGCCGACAGAGCACTGATCAACAGCATGGACCAGA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTCTGGTCCATGCTGTTaGTCAGTGCTCTGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSSGPCC*SVLCRQ
Trigger: TTGCCGACAGAGCACTGATCAACAGCATGGACCAGA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACCAAGCAGTGTCTCTTaGACCAGTTCCCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPPSSVS*TSSQGE
Trigger: TTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGGGCCGTTTCAGTCTTaGGACGTCTGTACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSGPFQS*DVCTPF
Trigger: AAACGGAGTACAGACGTCTCAAGACTGAAACGGCCC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATGGGCCGTTTCAGTCTTaGGACGTCTGTACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYGPFQS*DVCTPF
Trigger: AAACGGAGTACAGACGTCTCAAGACTGAAACGGCCC...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTTACTTGTCTGCGGCTaGGTGAGATCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRLLVCG*VRSATR
Trigger: TCTAGTAGCGGATCTCACTCAGCCGCAGACAAGTAA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCTACGGAGGGGCTTATaGGTCATGAAATCACCAGTC +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRLRRGL*VMKSPV
Trigger: GACTGGTGATTTCATGACTCATAAGCCCCTCCGTAG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTGACGTGGTGGACCTTTaGCTGCTTGATGGCACCCCG +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLDVVDL*LLDGTP
Trigger: CGGGGTGCCATCAAGCAGGCAAAGGTCCACCACGTC...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAAGCGAGCCTGTTGAGTaGTCTCAATCATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGSEPVE*SQSWPA
Trigger: CGCTGGCCATGATTGAGAGCACTCAACAGGCTCGCT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCTTCTCTACCATCGTaGACTCAACATCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSSLPS*TQHHRP
Trigger: TGGACGATGATGTTGAGTGCACGATGGTAGAGAAGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTCTTCTCTACCATCGTaGACTCAACATCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLSSLPS*TQHHRP
Trigger: TGGACGATGATGTTGAGTGCACGATGGTAGAGAAGA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATGCGTCAGAAACGGATaGTCCCAGGCCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRCVRNG*SQAKER
Trigger: TCTTTCCTTGGCCTGGGAGCATCCGTTTCTGACGCA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTGCGTCAGAAACGGATaGTCCCAGGCCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYCVRNG*SQAKER
Trigger: TCTTTCCTTGGCCTGGGAGCATCCGTTTCTGACGCA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGCCAATCCGAAGAAATaGCGACATGGTTGCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGANPKK*RHGCAL
Trigger: CAGGGCGCAACCATGTCGCCATTTCTTCGGATTGGC...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCCTTCCCTTGTTGATATaGGCATCAAAAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSLPLLI*ASKVLS
Trigger: GGACAGCACTTTTGATGCCCATATCAACAAGGGAAG...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTGGCACTTGACGTGGTaGACCTTTGCCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFWHLTW*TFACLM
Trigger: CATCAAGCAGGCAAAGGTCCACCACGTCAAGTGCCA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGAGACAGAGCAAAATGTaGGCTGTGGGAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRRQSKM*AVGRRW
Trigger: CCACCTTCTTCCCACAGCCCACATTTTGCTCTGTCT...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGGAGTGCTCTCAATCATaGCCAGCGCTTCAGCCATTA +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRECSQS*PALQPL
Trigger: TAATGGCTGAAGCGCTGGCCATGATTGAGAGCACTC...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTGGCAGCTTTGGATGTaGTACATTAAGTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRWQLWM*YIKSPP
Trigger: CGGAGGGGACTTAATGTACCACATCCAAAGCTGCCA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCACCCAGCAAGATCTCTaGGGCGATGTAGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFTQQDL*GDVVRC
Trigger: ACACCTGACTACATCGCCCCAGAGATCTTGCTGGGT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATCCATGCGGATGGAGTaGAAGAGCTCCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGSMRME*KSSSSS
Trigger: GGATGAGGAGGAGCTCTTCCACTCCATCCGCATGGA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGATTGTCCATGCGGATaGAGTGGAAGAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSDCPCG*SGRAPP
Trigger: AGGAGGAGCTCTTCCACTCCATCCGCATGGACAATC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATGATTGTCCATGCGGATaGAGTGGAAGAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYDCPCG*SGRAPP
Trigger: AGGAGGAGCTCTTCCACTCCATCCGCATGGACAATC...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATTTCGGCCGGAACGGTaGGTCAATCTCCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGFRPER*VNLLPF
Trigger: GAACGGAAGGAGATTGACCCACCGTTCCGGCCGAAA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTCATTGATCAGCAGTTaGCGCCCAGGTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFSLISS*RPGEEP
Trigger: TGGCTCTTCACCTGGGCGCCAACTGCTGATCAATGA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACGGTGGTTTCAGAGATaGGGTCCACGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYARWFQR*GPRFCL
Trigger: AAGGCAAAAACGTGGACCTCATCTCTGAAACCACCG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACGGTGGTTTCAGAGATaGGGTCCACGTTTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPRWFQR*GPRFCL
Trigger: AAGGCAAAAACGTGGACCTCATCTCTGAAACCACCG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGGACCTTTGCCTGCTTaGTGGCACCCCGGCGCTGAT +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQGPLPA*WHPGAD
Trigger: ATCAGCGCCGGGGTGCCATCAAGCAGGCAAAGGTCC...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGACTGCAGACCAAGAATaGTTTCAGCAGCATAAAACG +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLTADQE*FQQHKT
Trigger: CGTTTTATGCTGCTGAAATCATTCTTGGTCTGCAGT...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAGAGTGGTTGTATTTCTaGCCCAGCAAGATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTREWLYF*PSKISG
Trigger: CCCAGAGATCTTGCTGGGTCAGAAATACAACCACTC...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGAGTGGTTGTATTTCTaGCCCAGCAAGATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPEWLYF*PSKISG
Trigger: CCCAGAGATCTTGCTGGGTCAGAAATACAACCACTC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCAAGTTCCTCCCAGTTaGTCTCCCGAAACAAAGGGT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYQVPPS*SPETKG
Trigger: ACCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCAACAAGCATTTCATTaGTCAGCAGTTGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFQQAFH*SAVGAQ
Trigger: CTGGGCGCCAACTGCTGATCAATGAAATGCTTGTTG...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCAACAAGCATTTCATTaGTCAGCAGTTGGCGCCCAG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSQQAFH*SAVGAQ
Trigger: CTGGGCGCCAACTGCTGATCAATGAAATGCTTGTTG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGGGCCGTTTCAGTCTTaGGACGTCTGTACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGGPFQS*DVCTPF
Trigger: AAACGGAGTACAGACGTCTCAAGACTGAAACGGCCC...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTTACTTGTCTGCGGCTaGGTGAGATCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYLLVCG*VRSATR
Trigger: TCTAGTAGCGGATCTCACTCAGCCGCAGACAAGTAA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTTACTTGTCTGCGGCTaGGTGAGATCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSLLVCG*VRSATR
Trigger: TCTAGTAGCGGATCTCACTCAGCCGCAGACAAGTAA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTTCCACTTGTCCTCTTaGCCATGGATTTCATGCCCA +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRFHLSS*PWISCP
Trigger: TGGGCATGAAATCCATGGTCAAGAGGACAAGTGGAA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATGAGAATGGCAGTGAGTaGCTGTGCCAATACTGGAGT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYENGSE*LCQYWS
Trigger: ACTCCAGTATTGGCACAGTCACTCACTGCCATTCTC...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGGGGCTTATGAGTCATaGAATCACCAGTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSGAYES*NHQSWH
Trigger: GTGCCATGACTGGTGATTTCATGACTCATAAGCCCC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGGGGCTTATGAGTCATaGAATCACCAGTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPGAYES*NHQSWH
Trigger: GTGCCATGACTGGTGATTTCATGACTCATAAGCCCC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTACGGAGGGGCTTATaGGTCATGAAATCACCAGTC +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFLRRGL*VMKSPV
Trigger: GACTGGTGATTTCATGACTCATAAGCCCCTCCGTAG...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCGCCATTGATCTTGAATaGTGCCTACGGAGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFAIDLE*CLRRGL
Trigger: TAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGC...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAGCCATTGATCTTGAATaGTGCCTACGGAGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAAIDLE*CLRRGL
Trigger: TAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGC...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATATGGGCATCAAAAGTaGTGTCCCAGGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRYGHQK*CPRVGT
Trigger: TGTACCCACCCTGGGACAGCACTTTTGATGCCCATA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTATGGGCATCAAAAGTaGTGTCCCAGGGTGGGTACA +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYYGHQK*CPRVGT
Trigger: TGTACCCACCCTGGGACAGCACTTTTGATGCCCATA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAGAGACTCCCAGGAAATaGCCTGAGGCTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAETPRK*PEALFF
Trigger: GAAAAAGAGAGCCTCAGGGCATTTCCTGGGAGTCTC...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGAGACTCCCAGGAAATaGCCTGAGGCTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPETPRK*PEALFF
Trigger: GAAAAAGAGAGCCTCAGGGCATTTCCTGGGAGTCTC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAGAGACTCCCAGGAAATaGCCTGAGGCTCTCTTTTTC +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRETPRK*PEALFF
Trigger: GAAAAAGAGAGCCTCAGGGCATTTCCTGGGAGTCTC...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACTGCCAGGAAGACCTTaGCAAAACTTCCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYALPGRP*QNFLSP
Trigger: TGGGGAAAGGAAGTTTTGGCAAGGTCTTCCTGGCAG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACTGCCAGGAAGACCTTaGCAAAACTTCCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRLPGRP*QNFLSP
Trigger: TGGGGAAAGGAAGTTTTGGCAAGGTCTTCCTGGCAG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTCCCGAAACAAAGGGTaGTGGCGGATGTCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLSRNKG*WRMSPL
Trigger: GAGGGGAGACATCCGCCAGCACCCTTTGTTTCGGGA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGAACTCAATTGACTGCTaGAAACAGCATGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRNSIDC*KQHAWA
Trigger: GGCCCATGCATGCTGTTTGCAGCAGTCAATTGAGTT...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGATGGTAGGCTTTTTCTaGATATACATCTGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLMVGFF*IYICPF
Trigger: GAACGGGCAGATGTATATCCAGAAAAAGCCTACCAT...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATAGTGCTGTCCCAGGGTaGGTACATGGTAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYSAVPG*VHGRLF
Trigger: AAAAAGCCTACCATGTACCCACCCTGGGACAGCACT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATGGCACTTGACGTGGTaGACCTTTGCCTGCTTGATG +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGWHLTW*TFACLM
Trigger: CATCAAGCAGGCAAAGGTCCACCACGTCAAGTGCCA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCAGACAGAGCAAAATGTaGGCTGTGGGAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFRQSKM*AVGRRW
Trigger: CCACCTTCTTCCCACAGCCCACATTTTGCTCTGTCT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAAGACAGAGCAAAATGTaGGCTGTGGGAAGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRRQSKM*AVGRRW
Trigger: CCACCTTCTTCCCACAGCCCACATTTTGCTCTGTCT...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCCCCAGACAAACTCGTaGCAGACAGAGCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSPQTNS*QTEQNV
Trigger: CACATTTTGCTCTGTCTGCCACGAGTTTGTCTGGGG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACCCCAGACAAACTCGTaGCAGACAGAGCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRPQTNS*QTEQNV
Trigger: CACATTTTGCTCTGTCTGCCACGAGTTTGTCTGGGG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCGAGTGCTCTCAATCATaGCCAGCGCTTCAGCCATTA +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFECSQS*PALQPL
Trigger: TAATGGCTGAAGCGCTGGCCATGATTGAGAGCACTC...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCAGGTTCTGGAAGATaGCACATTTTATCCACCTCA +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSGSGR*HILSTS
Trigger: TGAGGTGGATAAAATGTGCCATCTTCCAGAACCTGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTGGCAGCTTTGGATGTaGTACATTAAGTCCCCTCCG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSWQLWM*YIKSPP
Trigger: CGGAGGGGACTTAATGTACCACATCCAAAGCTGCCA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCATAAAACGTCGCTCTaGAAAGGTCGAACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRHKTSL*KGRTCG
Trigger: GCCACAAGTTCGACCTTTCCAGAGCGACGTTTTATG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGATTGTCCATGCGGATaGAGTGGAAGAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGDCPCG*SGRAPP
Trigger: AGGAGGAGCTCTTCCACTCCATCCGCATGGACAATC...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACTTCTCCAGCCACCGTaGGTAAAAGGGATTGTCCAT +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYALLQPP*VKGIVH
Trigger: ATGGACAATCCCTTTTACCCACGGTGGCTGGAGAAG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCAGATAAAAGTCACATaGGGGCGAACGGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYQIKVT*GRTGLS
Trigger: ACTGAGACCCGTTCGCCCCCATGTGACTTTTATCTG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCAGATAAAAGTCACATaGGGGCGAACGGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSQIKVT*GRTGLS
Trigger: ACTGAGACCCGTTCGCCCCCATGTGACTTTTATCTG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCAGATAAAAGTCACATaGGGGCGAACGGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFQIKVT*GRTGLS
Trigger: ACTGAGACCCGTTCGCCCCCATGTGACTTTTATCTG...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTAAGCAGCGAGCCTGTTaGGTGCTCTCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLKQRAC*VLSIMA
Trigger: GGCCATGATTGAGAGCACTCAACAGGCTCGCTGCTT...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACAACCGGACCTTCTCTaGAGATCTGTTCAGTATCTC +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRQPDLL*RSVQYL
Trigger: GAGATACTGAACAGATCTTCAGAGAAGGTCCGGTTG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCAACCGGACCTTCTCTaGAGATCTGTTCAGTATCTC +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSQPDLL*RSVQYL
Trigger: GAGATACTGAACAGATCTTCAGAGAAGGTCCGGTTG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTCCCAGGAAATGCCCTaGGGCTCTCTTTTTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLSQEMP*GSLFPG
Trigger: ACCGGGAAAAAGAGAGCCTCAGGGCATTTCCTGGGA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGCAAAATCCGCGATCTTaGTATGTCCATCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLQNPRS*YVHLCL
Trigger: TAGACAAAGATGGACATATCAAGATCGCGGATTTTG...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGAGTGGTTGTATTTCTaGCCCAGCAAGATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGEWLYF*PSKISG
Trigger: CCCAGAGATCTTGCTGGGTCAGAAATACAACCACTC...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATTACTTGTCTGCGGCTaGGTGAGATCCGCTACTAGA +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGLLVCG*VRSATR
Trigger: TCTAGTAGCGGATCTCACTCAGCCGCAGACAAGTAA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTTCCACTTGTCCTCTTaGCCATGGATTTCATGCCCA +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSFHLSS*PWISCP
Trigger: TGGGCATGAAATCCATGGTCAAGAGGACAAGTGGAA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAAATACTGGAGTCTGCTaGGAATGGGTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYANTGVC*EWVDGK
Trigger: CTTTCCATCCACCCATTCTCAGCAGACTCCAGTATT...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAAATACTGGAGTCTGCTaGGAATGGGTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPNTGVC*EWVDGK
Trigger: CTTTCCATCCACCCATTCTCAGCAGACTCCAGTATT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTCTTCTCTACCATCGTaGACTCAACATCATCGTCCA +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRSSLPS*TQHHRP
Trigger: TGGACGATGATGTTGAGTGCACGATGGTAGAGAAGA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCAAAAGGGATTGTCCATaGGGATGGAGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFKRDCP*GWSGRA
Trigger: AGCTCTTCCACTCCATCCGCATGGACAATCCCTTTT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATAAAAGGGATTGTCCATaGGGATGGAGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYKRDCP*GWSGRA
Trigger: AGCTCTTCCACTCCATCCGCATGGACAATCCCTTTT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAAAAAGGGATTGTCCATaGGGATGGAGTGGAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPKRDCP*GWSGRA
Trigger: AGCTCTTCCACTCCATCCGCATGGACAATCCCTTTT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCAACTCAATTGACTGCTaGAAACAGCATGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFNSIDC*KQHAWA
Trigger: GGCCCATGCATGCTGTTTGCAGCAGTCAATTGAGTT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGACACATCCACCTGTTTaGCATGAAGTCACAACATTT +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLTHPPV*HEVTTF
Trigger: AAATGTTGTGACTTCATGGCAAACAGGTGGATGTGT...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTCGTGGCACTTGACGTaGTGGACCTTTGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLSWHLT*WTFACL
Trigger: CAAGCAGGCAAAGGTCCACCACGTCAAGTGCCACGA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACCCCAGACAAACTCGTaGCAGACAGAGCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGPQTNS*QTEQNV
Trigger: CACATTTTGCTCTGTCTGCCACGAGTTTGTCTGGGG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATTATGCCACAAAGGTTaGCCACCTTTGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPLCHKG*PPLSGI
Trigger: GATGCCAGACAAAGGTGGCCAACCTTTGTGGCATAA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTTATGCCACAAAGGTTaGCCACCTTTGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSLCHKG*PPLSGI
Trigger: GATGCCAGACAAAGGTGGCCAACCTTTGTGGCATAA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATTATGCCACAAAGGTTaGCCACCTTTGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYALCHKG*PPLSGI
Trigger: GATGCCAGACAAAGGTGGCCAACCTTTGTGGCATAA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATGAAAGGTCGAACTTGTaGCAGCTTTGGATGTGGTAC +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYERSNL*QLWMWY
Trigger: GTACCACATCCAAAGCTGCCACAAGTTCGACCTTTC...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGAAAGGTCGAACTTGTaGCAGCTTTGGATGTGGTAC +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSERSNL*QLWMWY
Trigger: GTACCACATCCAAAGCTGCCACAAGTTCGACCTTTC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
3UTR CAA 72 bp ACTCAATTGACTGCTGCAAACAGCATGCATGGGCCATaGATCTTGAATGATGCCTACGGAGGGGCTTATGAG +
Preference number: 4 (lower is better)
Translates to: TQLTAANSMHGP*ILNDAYGGAYE
Trigger: CTCATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGCAGCAGTCAATTGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAATTAGCATTCGGCCTTaGGGTTTCAGCTCTAACCAT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPISIRP*GFSSNH
Trigger: ATGGTTAGAGCTGAAACCTCAAGGCCGAATGCTAAT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS-3UTR TCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCAATACACTTCTTGTaGATTGCTGCATTGCATTGT +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSIHFL*IAALHC
Trigger: ACAATGCAATGCAGCAATTCACAAGAAGTGTATTGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACAACCGGACCTTCTCTaGAGATCTGTTCAGTATCTC +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGQPDLL*RSVQYL
Trigger: GAGATACTGAACAGATCTTCAGAGAAGGTCCGGTTG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTCTGGTCCATGCTGTTaGTCAGTGCTCTGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLSGPCC*SVLCRQ
Trigger: TTGCCGACAGAGCACTGATCAACAGCATGGACCAGA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGCTGGCAAGGGTGAAATaGTACTATCTTTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLLARVK*YYLFYL
Trigger: AAGATAGAAAAGATAGTATCATTTCACCCTTGCCAG...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACTTCTTGTGAATTGCTaGATTGCATTGTCGGCACTG +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRLLVNC*IALSAL
Trigger: CAGTGCCGACAATGCAATGCAGCAATTCACAAGAAG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCTTCTTGTGAATTGCTaGATTGCATTGTCGGCACTG +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYLLVNC*IALSAL
Trigger: CAGTGCCGACAATGCAATGCAGCAATTCACAAGAAG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCTTGAGTCCTTGCCGTaGCAGTCCCCACAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVLESLP*QSPQQG
Trigger: ACCCTGCTGTGGGGACTGGCACGGCAAGGACTCAAG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATCACACTTGAGTCCTTaGCGTGCCAGTCCCCACAGC +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQSHLSP*RASPHS
Trigger: GCTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCTAACATGTTCTCCTTaGACATTCCAAAATCCGCGA +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRLTCSP*TFQNPR
Trigger: TCGCGGATTTTGGAATGTGCAAGGAGAACATGTTAG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAAACTCAATTGACTGCTaGAAACAGCATGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGNSIDC*KQHAWA
Trigger: GGCCCATGCATGCTGTTTGCAGCAGTCAATTGAGTT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAACCCGCAGTCAAAGTTaGACAAGCCAATCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGTRSQS*TSQSEE
Trigger: TTCTTCGGATTGGCTTGTCCAACTTTGACTGCGGGT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCTTCCCTTGTTGATATaGGCATCAAAAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSLPLLI*ASKVLS
Trigger: GGACAGCACTTTTGATGCCCATATCAACAAGGGAAG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTGGCAGTGAACTCGTaGCACTTGACGTGGTGGACC +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQVAVNS*HLTWWT
Trigger: GGTCCACCACGTCAAGTGCCACGAGTTCACTGCCAC...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTACCCAGCAAGATCTCTaGGGCGATGTAGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLTQQDL*GDVVRC
Trigger: ACACCTGACTACATCGCCCCAGAGATCTTGCTGGGT...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACGAAACAAAGGGTGCTaGCGGATGTCTCCCCTCACG +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQRNKGC*RMSPLT
Trigger: CGTGAGGGGAGACATCCGCCAGCACCCTTTGTTTCG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGTGGCATGTCAATTTTaGATCTCTCCTTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSVACQF*ISPCGT
Trigger: TGTTCCACAAGGAGAGATTCAAAATTGACATGCCAC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATGTGGCATGTCAATTTTaGATCTCTCCTTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYVACQF*ISPCGT
Trigger: TGTTCCACAAGGAGAGATTCAAAATTGACATGCCAC...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAGTGGCATGTCAATTTTaGATCTCTCCTTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAVACQF*ISPCGT
Trigger: TGTTCCACAAGGAGAGATTCAAAATTGACATGCCAC...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGATTGATTGGTTTTCTTaGATTCTGCCAGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRIDWFS*ILPGRP
Trigger: AGGTCTTCCTGGCAGAATTCAAGAAAACCAATCAAT...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATACTGCAGACCAAGAATaGTTTCAGCAGCATAAAACG +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYTADQE*FQQHKT
Trigger: CGTTTTATGCTGCTGAAATCATTCTTGGTCTGCAGT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCACTGCAGACCAAGAATaGTTTCAGCAGCATAAAACG +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFTADQE*FQQHKT
Trigger: CGTTTTATGCTGCTGAAATCATTCTTGGTCTGCAGT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAACTGCAGACCAAGAATaGTTTCAGCAGCATAAAACG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPTADQE*FQQHKT
Trigger: CGTTTTATGCTGCTGAAATCATTCTTGGTCTGCAGT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATACTATTCCTTTGGAATaGAGGAACTGCAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYTIPLE*RNCRPR
Trigger: TCTTGGTCTGCAGTTCCTTCATTCCAAAGGAATAGT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCACTATTCCTTTGGAATaGAGGAACTGCAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFTIPLE*RNCRPR
Trigger: TCTTGGTCTGCAGTTCCTTCATTCCAAAGGAATAGT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATTGTCTGCGGCTGAGTaGGATCCGCTACTAGACCAG +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQLSAAE*DPLLDQ
Trigger: CTGGTCTAGTAGCGGATCTCACTCAGCCGCAGACAA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTGGGGCTTATGAGTCATaGAATCACCAGTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLGAYES*NHQSWH
Trigger: GTGCCATGACTGGTGATTTCATGACTCATAAGCCCC...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTGCCATTGATCTTGAATaGTGCCTACGGAGGGGCTTA +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLAIDLE*CLRRGL
Trigger: TAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGC...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTCCACCTGTTTGCCATaGAGTCACAACATTTTATCA +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRSTCLP*SHNILS
Trigger: TGATAAAATGTTGTGACTTCATGGCAAACAGGTGGA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACCTTTCACAATGATCTaGATGACTCTTCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPPFTMI*MTLPLL
Trigger: CAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCCTTTCACAATGATCTaGATGACTCTTCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSPFTMI*MTLPLL
Trigger: CAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCACACTTCTTGTGAATTaGTGCATTGCATTGTCGGCA +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFTLLVN*CIALSA
Trigger: TGCCGACAATGCAATGCAGCAATTCACAAGAAGTGT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTCTGCCAGGAAGACCTTaGCAAAACTTCCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLLPGRP*QNFLSP
Trigger: TGGGGAAAGGAAGTTTTGGCAAGGTCTTCCTGGCAG...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGGTTTTCTTGAATTCTaGCAGGAAGACCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSGFLEF*QEDLAK
Trigger: TTTGGCAAGGTCTTCCTGGCAGAATTCAAGAAAACC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGGTTTTCTTGAATTCTaGCAGGAAGACCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPGFLEF*QEDLAK
Trigger: TTTGGCAAGGTCTTCCTGGCAGAATTCAAGAAAACC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCGGTTTTCTTGAATTCTaGCAGGAAGACCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFGFLEF*QEDLAK
Trigger: TTTGGCAAGGTCTTCCTGGCAGAATTCAAGAAAACC...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCAATGTACAAAACATGTaGGTCAGAAACGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFNVQNM*VRNGCS
Trigger: GGAGCATCCGTTTCTGACGCACATGTTTTGTACATT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACTAACATGTTCTCCTTaGACATTCCAAAATCCGCGA +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPLTCSP*TFQNPR
Trigger: TCGCGGATTTTGGAATGTGCAAGGAGAACATGTTAG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCATTCTTTGTCGAAATTaGTGCAGTCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSILCRN*CSQMVI
Trigger: AATCACCATTTGACTGCAGCAATTTCGACAAAGAAT...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATTCAACTCAATTGACTaGTGCAAACAGCATGCATGG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPFNSID*CKQHAW
Trigger: CCATGCATGCTGTTTGCAGCAGTCAATTGAGTTGAA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATTCAACTCAATTGACTaGTGCAAACAGCATGCATGG +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRFNSID*CKQHAW
Trigger: CCATGCATGCTGTTTGCAGCAGTCAATTGAGTTGAA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTTCAACTCAATTGACTaGTGCAAACAGCATGCATGG +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFFNSID*CKQHAW
Trigger: CCATGCATGCTGTTTGCAGCAGTCAATTGAGTTGAA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCATGGTAGGCTTTTTCTaGATATACATCTGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFMVGFF*IYICPF
Trigger: GAACGGGCAGATGTATATCCAGAAAAAGCCTACCAT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTCAGCCATTAGCTTCTaGTTTATGCCACAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFSAISF*FMPQRL
Trigger: CAACCTTTGTGGCATAAACCAGAAGCTAATGGCTGA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATCAGCCATTAGCTTCTaGTTTATGCCACAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPSAISF*FMPQRL
Trigger: CAACCTTTGTGGCATAAACCAGAAGCTAATGGCTGA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTCAGCCATTAGCTTCTaGTTTATGCCACAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSSAISF*FMPQRL
Trigger: CAACCTTTGTGGCATAAACCAGAAGCTAATGGCTGA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATCAGCCATTAGCTTCTaGTTTATGCCACAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYASAISF*FMPQRL
Trigger: CAACCTTTGTGGCATAAACCAGAAGCTAATGGCTGA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAATTTTTGATGGAGCATaGGAGACCAATTTCAACCGG +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPIFDGA*ETNFNR
Trigger: CCGGTTGAAATTGGTCTCCCATGCTCCATCAAAAAT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAATTTTTGATGGAGCATaGGAGACCAATTTCAACCGG +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRIFDGA*ETNFNR
Trigger: CCGGTTGAAATTGGTCTCCCATGCTCCATCAAAAAT...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTCAGGTTCTGGAAGATaGCACATTTTATCCACCTCA +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSSGSGR*HILSTS
Trigger: TGAGGTGGATAAAATGTGCCATCTTCCAGAACCTGA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTTTAATCTGCAGAGATaGTCTTTCTTTGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLFNLQR*SFFVQF
Trigger: GAACTGAACAAAGAAAGACCATCTCTGCAGATTAAA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTTTAATCTGCAGAGATaGTCTTTCTTTGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSFNLQR*SFFVQF
Trigger: GAACTGAACAAAGAAAGACCATCTCTGCAGATTAAA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAAACTTGTGGCAGCTTTaGATGTGGTACATTAAGTCC +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYANLWQL*MWYIKS
Trigger: GGACTTAATGTACCACATCCAAAGCTGCCACAAGTT...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAAACTTGTGGCAGCTTTaGATGTGGTACATTAAGTCC +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPNLWQL*MWYIKS
Trigger: GGACTTAATGTACCACATCCAAAGCTGCCACAAGTT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTCTTCTCCAGCCACCGTaGGTAAAAGGGATTGTCCAT +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLLLQPP*VKGIVH
Trigger: ATGGACAATCCCTTTTACCCACGGTGGCTGGAGAAG...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTAAGCAGCGAGCCTGTTaGGTGCTCTCAATCATGGCC +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVKQRAC*VLSIMA
Trigger: GGCCATGATTGAGAGCACTCAACAGGCTCGCTGCTT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTCAACCGGACCTTCTCTaGAGATCTGTTCAGTATCTC +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLQPDLL*RSVQYL
Trigger: GAGATACTGAACAGATCTTCAGAGAAGGTCCGGTTG...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAATTGATTGGTTTTCTTaGATTCTGCCAGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRIDWFS*ILPGRP
Trigger: AGGTCTTCCTGGCAGAATTCAAGAAAACCAATCAAT...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAATTGATTGGTTTTCTTaGATTCTGCCAGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPIDWFS*ILPGRP
Trigger: AGGTCTTCCTGGCAGAATTCAAGAAAACCAATCAAT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACAAAATCCGCGATCTTaGTATGTCCATCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAQNPRS*YVHLCL
Trigger: TAGACAAAGATGGACATATCAAGATCGCGGATTTTG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACAAAATCCGCGATCTTaGTATGTCCATCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRQNPRS*YVHLCL
Trigger: TAGACAAAGATGGACATATCAAGATCGCGGATTTTG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCTTCAGGAGCGTCTGTaGGACATGTCAGGAGACGAG +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVLQERL*DMSGDE
Trigger: CTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCTGGCAAGGGTGAAATaGTACTATCTTTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRLARVK*YYLFYL
Trigger: AAGATAGAAAAGATAGTATCATTTCACCCTTGCCAG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTCCACCTGTTTGCCATaGAGTCACAACATTTTATCA +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSSTCLP*SHNILS
Trigger: TGATAAAATGTTGTGACTTCATGGCAAACAGGTGGA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATCCACCTGTTTGCCATaGAGTCACAACATTTTATCA +
Preference number: 4 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRSTCLP*SHNILS
Trigger: TGATAAAATGTTGTGACTTCATGGCAAACAGGTGGA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTAGCGAGCCTGTTGAGTaGTCTCAATCATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVSEPVE*SQSWPA
Trigger: CGCTGGCCATGATTGAGAGCACTCAACAGGCTCGCT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATGCGTCAGAAACGGATaGTCCCAGGCCAAGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQCVRNG*SQAKER
Trigger: TCTTTCCTTGGCCTGGGAGCATCCGTTTCTGACGCA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACTAACATGTTCTCCTTaGACATTCCAAAATCCGCGA +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGLTCSP*TFQNPR
Trigger: TCGCGGATTTTGGAATGTGCAAGGAGAACATGTTAG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCACACATCCACCTGTTTaGCATGAAGTCACAACATTT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSTHPPV*HEVTTF
Trigger: AAATGTTGTGACTTCATGGCAAACAGGTGGATGTGT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAATTTTTGATGGAGCATaGGAGACCAATTTCAACCGG +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGIFDGA*ETNFNR
Trigger: CCGGTTGAAATTGGTCTCCCATGCTCCATCAAAAAT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTCATAAAACGTCGCTCTaGAAAGGTCGAACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLHKTSL*KGRTCG
Trigger: GCCACAAGTTCGACCTTTCCAGAGCGACGTTTTATG...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTCAATACACTTCTTGTaGATTGCTGCATTGCATTGT +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFSIHFL*IAALHC
Trigger: ACAATGCAATGCAGCAATTCACAAGAAGTGTATTGA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATCAATACACTTCTTGTaGATTGCTGCATTGCATTGT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPSIHFL*IAALHC
Trigger: ACAATGCAATGCAGCAATTCACAAGAAGTGTATTGA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACAAGTTCCTCCCAGTTaGTCTCCCGAAACAAAGGGT +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQQVPPS*SPETKG
Trigger: ACCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCCAAGCAGTGTCTCTTaGACCAGTTCCCAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVPSSVS*TSSQGE
Trigger: TTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACAGTTGGCGCCCAGGTaGAGAGCCATAATTTATTGC +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQQLAPR*RAIIYC
Trigger: GCAATAAATTATGGCTCTTCACCTGGGCGCCAACTG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACTGGCAAGGGTGAAATaGTACTATCTTTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPLARVK*YYLFYL
Trigger: AAGATAGAAAAGATAGTATCATTTCACCCTTGCCAG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACTACGGAGGGGCTTATaGGTCATGAAATCACCAGTC +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQLRRGL*VMKSPV
Trigger: GACTGGTGATTTCATGACTCATAAGCCCCTCCGTAG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATCCACCTGTTTGCCATaGAGTCACAACATTTTATCA +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGSTCLP*SHNILS
Trigger: TGATAAAATGTTGTGACTTCATGGCAAACAGGTGGA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACTGCCAGGAAGACCTTaGCAAAACTTCCTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQLPGRP*QNFLSP
Trigger: TGGGGAAAGGAAGTTTTGGCAAGGTCTTCCTGGCAG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACTTTGTCGAAATTGCTaGAGTCAAATGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: TPFAPDSTSISLISSWRPLCRNC*SQMVIS
Trigger: TGAAATCACCATTTGACTGCAGCAATTTCGACAAAG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAAGTGCTGTCCCAGGGTaGGTACATGGTAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQSAVPG*VHGRLF
Trigger: AAAAAGCCTACCATGTACCCACCCTGGGACAGCACT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTCTTCCCTTGTTGATATaGGCATCAAAAGTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLLPLLI*ASKVLS
Trigger: GGACAGCACTTTTGATGCCCATATCAACAAGGGAAG...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTACCCAGCAAGATCTCTaGGGCGATGTAGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVTQQDL*GDVVRC
Trigger: ACACCTGACTACATCGCCCCAGAGATCTTGCTGGGT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACAGATAAAAGTCACATaGGGGCGAACGGGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQQIKVT*GRTGLS
Trigger: ACTGAGACCCGTTCGCCCCCATGTGACTTTTATCTG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTTCATTGATCAGCAGTTaGCGCCCAGGTGAAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVSLISS*RPGEEP
Trigger: TGGCTCTTCACCTGGGCGCCAACTGCTGATCAATGA...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATCAATACACTTCTTGTaGATTGCTGCATTGCATTGT +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGSIHFL*IAALHC
Trigger: ACAATGCAATGCAGCAATTCACAAGAAGTGTATTGA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTACTATTCCTTTGGAATaGAGGAACTGCAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLTIPLE*RNCRPR
Trigger: TCTTGGTCTGCAGTTCCTTCATTCCAAAGGAATAGT...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCAGTTGGCGCCCAGGTaGAGAGCCATAATTTATTGC +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVQLAPR*RAIIYC
Trigger: GCAATAAATTATGGCTCTTCACCTGGGCGCCAACTG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATTCCACTTGTCCTCTTaGCCATGGATTTCATGCCCA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQFHLSS*PWISCP
Trigger: TGGGCATGAAATCCATGGTCAAGAGGACAAGTGGAA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACTGGCAAGGGTGAAATaGTACTATCTTTTCTATCTT +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGLARVK*YYLFYL
Trigger: AAGATAGAAAAGATAGTATCATTTCACCCTTGCCAG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTGAGAATGGCAGTGAGTaGCTGTGCCAATACTGGAGT +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVENGSE*LCQYWS
Trigger: ACTCCAGTATTGGCACAGTCACTCACTGCCATTCTC...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTGGGGCTTATGAGTCATaGAATCACCAGTCATGGCAC +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVGAYES*NHQSWH
Trigger: GTGCCATGACTGGTGATTTCATGACTCATAAGCCCC...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCTACGGAGGGGCTTATaGGTCATGAAATCACCAGTC +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVLRRGL*VMKSPV
Trigger: GACTGGTGATTTCATGACTCATAAGCCCCTCCGTAG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTACACTTCTTGTGAATTaGTGCATTGCATTGTCGGCA +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLTLLVN*CIALSA
Trigger: TGCCGACAATGCAATGCAGCAATTCACAAGAAGTGT...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACTTTGTCGAAATTGCTaGAGTCAAATGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGLCRNC*SQMVIS
Trigger: TGAAATCACCATTTGACTGCAGCAATTTCGACAAAG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCATTCTTTGTCGAAATTaGTGCAGTCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSILCRN*CSQMVI
Trigger: AATCACCATTTGACTGCAGCAATTTCGACAAAGAAT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTTCAACTCAATTGACTaGTGCAAACAGCATGCATGG +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLFNSID*CKQHAW
Trigger: CCATGCATGCTGTTTGCAGCAGTCAATTGAGTTGAA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAACCCGCAGTCAAAGTTaGACAAGCCAATCCGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQTRSQS*TSQSEE
Trigger: TTCTTCGGATTGGCTTGTCCAACTTTGACTGCGGGT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTATGGTAGGCTTTTTCTaGATATACATCTGCCCGTTC +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLMVGFF*IYICPF
Trigger: GAACGGGCAGATGTATATCCAGAAAAAGCCTACCAT...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCCCCAGACAAACTCGTaGCAGACAGAGCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVPQTNS*QTEQNV
Trigger: CACATTTTGCTCTGTCTGCCACGAGTTTGTCTGGGG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTATTTTTGATGGAGCATaGGAGACCAATTTCAACCGG +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLIFDGA*ETNFNR
Trigger: CCGGTTGAAATTGGTCTCCCATGCTCCATCAAAAAT...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTCAGGTTCTGGAAGATaGCACATTTTATCCACCTCA +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLSGSGR*HILSTS
Trigger: TGAGGTGGATAAAATGTGCCATCTTCCAGAACCTGA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTTTAATCTGCAGAGATaGTCTTTCTTTGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: GTQAVSLEPVPREKANSFFNLQR*SFFVQF
Trigger: GAACTGAACAAAGAAAGACCATCTCTGCAGATTAAA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTTTAATCTGCAGAGATaGTCTTTCTTTGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSFNLQR*SFFVQF
Trigger: GAACTGAACAAAGAAAGACCATCTCTGCAGATTAAA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGAAAGGTCGAACTTGTaGCAGCTTTGGATGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQERSNL*QLWMWY
Trigger: GTACCACATCCAAAGCTGCCACAAGTTCGACCTTTC...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACATAAAACGTCGCTCTaGAAAGGTCGAACTTGTGGC +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQHKTSL*KGRTCG
Trigger: GCCACAAGTTCGACCTTTCCAGAGCGACGTTTTATG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTCTTCTCCAGCCACCGTaGGTAAAAGGGATTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVLLQPP*VKGIVH
Trigger: ATGGACAATCCCTTTTACCCACGGTGGCTGGAGAAG...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTATTGATTGGTTTTCTTaGATTCTGCCAGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: KSHGGERVSVFIVECFFLIDWFS*ILPGRP
Trigger: AGGTCTTCCTGGCAGAATTCAAGAAAACCAATCAAT...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATGCAGTATCAAGTCTTaGAACCTTTCCAAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQCSIKS*NLSKCG
Trigger: TCCGCACTTGGAAAGGTTTCAAGACTTGATACTGCA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTAATACTGGAGTCTGCTaGGAATGGGTGGATGGAAAG +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVNTGVC*EWVDGK
Trigger: CTTTCCATCCACCCATTCTCAGCAGACTCCAGTATT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAATTCTTTGTCGAAATTaGTGCAGTCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGILCRN*CSQMVI
Trigger: AATCACCATTTGACTGCAGCAATTTCGACAAAGAAT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTAACTCAATTGACTGCTaGAAACAGCATGCATGGGCC +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVNSIDC*KQHAWA
Trigger: GGCCCATGCATGCTGTTTGCAGCAGTCAATTGAGTT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTTTATGCCACAAAGGTTaGCCACCTTTGTCTGGCATC +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVLCHKG*PPLSGI
Trigger: GATGCCAGACAAAGGTGGCCAACCTTTGTGGCATAA...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTATTAGCATTCGGCCTTaGGGTTTCAGCTCTAACCAT +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVISIRP*GFSSNH
Trigger: ATGGTTAGAGCTGAAACCTCAAGGCCGAATGCTAAT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTTGCAGTATCAAGTCTTaGAACCTTTCCAAGTGCGGA +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVCSIKS*NLSKCG
Trigger: TCCGCACTTGGAAAGGTTTCAAGACTTGATACTGCA...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACCTTTCACAATGATCTaGATGACTCTTCCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQPFTMI*MTLPLL
Trigger: CAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAACACTTCTTGTGAATTaGTGCATTGCATTGTCGGCA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQTLLVN*CIALSA
Trigger: TGCCGACAATGCAATGCAGCAATTCACAAGAAGTGT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAAATGTACAAAACATGTaGGTCAGAAACGGATGCTCC +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQNVQNM*VRNGCS
Trigger: GGAGCATCCGTTTCTGACGCACATGTTTTGTACATT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACTAACATGTTCTCCTTaGACATTCCAAAATCCGCGA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQLTCSP*TFQNPR
Trigger: TCGCGGATTTTGGAATGTGCAAGGAGAACATGTTAG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTGTGGCATGTCAATTTTaGATCTCTCCTTGTGGAACA +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVVACQF*ISPCGT
Trigger: TGTTCCACAAGGAGAGATTCAAAATTGACATGCCAC...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTACTATTCCTTTGGAATaGAGGAACTGCAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVTIPLE*RNCRPR
Trigger: TCTTGGTCTGCAGTTCCTTCATTCCAAAGGAATAGT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR TCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACAAAATCCGCGATCTTaGTATGTCCATCTTTGTCTA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQQNPRS*YVHLCL
Trigger: TAGACAAAGATGGACATATCAAGATCGCGGATTTTG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTACACTTCTTGTGAATTaGTGCATTGCATTGTCGGCA +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVTLLVN*CIALSA
Trigger: TGCCGACAATGCAATGCAGCAATTCACAAGAAGTGT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTGGTTTTCTTGAATTCTaGCAGGAAGACCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVGFLEF*QEDLAK
Trigger: TTTGGCAAGGTCTTCCTGGCAGAATTCAAGAAAACC...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAACACATCCACCTGTTTaGCATGAAGTCACAACATTT +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQTHPPV*HEVTTF
Trigger: AAATGTTGTGACTTCATGGCAAACAGGTGGATGTGT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACTTTGTCGAAATTGCTaGAGTCAAATGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQLCRNC*SQMVIS
Trigger: TGAAATCACCATTTGACTGCAGCAATTTCGACAAAG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTACACATCCACCTGTTTaGCATGAAGTCACAACATTT +
Preference number: 4 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVTHPPV*HEVTTF
Trigger: AAATGTTGTGACTTCATGGCAAACAGGTGGATGTGT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR GCA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAATTCTTTGTCGAAATTaGTGCAGTCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQILCRN*CSQMVI
Trigger: AATCACCATTTGACTGCAGCAATTTCGACAAAGAAT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 90 bp CCTTTGCTTCCTTCTCCAGCCACCGTGGGTAAAAGGGATTGTCCATaGGGATGGAGTGGAAGAGCTCCTCCTCATCCTGCCCGTGGAAAG +
Preference number: 5 (lower is better)
Translates to: PLLPSPATVGKRDCP*GWSGRAPPHPARGK
Trigger: CTTTCCACGGGCAGGATGAGGAGGAGCTCTTCCACTCCATCCGCATGGACAATCCCTTTTACCCACGGTGGCTGGAGAAGGAAGCAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGGAAATGGCGACATGGTaGCGCCCTGGAGCGAGCACG +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTREMATW*RPGAST
Trigger: CGTGCTCGCTCCAGGGCGCAACCATGTCGCCATTTC...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCATCACACTTGAGTCCTaGCCGTGCCAGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSITLES*PCQSPQ
Trigger: CTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGAT...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGAAATGGCGACATGGTaGCGCCCTGGAGCGAGCACG +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSEMATW*RPGAST
Trigger: CGTGCTCGCTCCAGGGCGCAACCATGTCGCCATTTC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGCCACATGCATCACACTaGAGTCCTTGCCGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLPHASH*SPCRAS
Trigger: ACTGGCACGGCAAGGACTCAAGTGTGATGCATGTGG...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 90 bp GAAGAGCTTCACCAGAAGGTCCTTTGCTTCCTTCTCCAGCCACCGTaGGTAAAAGGGATTGTCCATGCGGATGGAGTGGAAGAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: EELHQKVLCFLLQPP*VKGIVHADGVEELL
Trigger: GAGGAGCTCTTCCACTCCATCCGCATGGACAATCCCTTTTACCCACGGTGGCTGGAGAAGGAAGCAAAGGACCTTCTGGTGAAGCTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS CCA 90 bp CTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTGTCTCTaGAGGGGCAAGATTCAGGATATCAGCCGCTCCATCCCGGGGTTC +
Preference number: 5 (lower is better)
Translates to: LLNQFPGRRQILSCL*RGKIQDISRSIPGF
Trigger: GAACCCCGGGATGGAGCGGCTGATATCCTGAATCTTGCCCCTCCAGAGACAGGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCGACCCGCAGTCAAAGTaGGACAAGCCAATCCGAAGA +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSDPQSK*DKPIRR
Trigger: TCTTCGGATTGGCTTGTCCAACTTTGACTGCGGGTC...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGGACCCGCAGTCAAAGTaGGACAAGCCAATCCGAAGA +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLDPQSK*DKPIRR
Trigger: TCTTCGGATTGGCTTGTCCAACTTTGACTGCGGGTC...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCAATTGCTGCATTGCATaGTCGGCACTGGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSNCCIA*SALVAL
Trigger: CAGGGCTACCAGTGCCGACAATGCAATGCAGCAATT...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGATCACACTTGAGTCCTaGCCGTGCCAGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRITLES*PCQSPQ
Trigger: CTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGAT...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCTGCCAGGAAGACCTaGCCAAAACTTCCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSARKT*PKLPFP
Trigger: GGGGAAAGGAAGTTTTGGCAAGGTCTTCCTGGCAGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS TCA 90 bp CACTTGACGTGGTGGACCTTTGCCTGCTTGATGGCACCCCGGCGCTaGTGCAAAGCAAAGAAGCCTTCCGTCTCAAATTCATTCATGTCC +
Preference number: 5 (lower is better)
Translates to: HLTWWTFACLMAPRR*CKAKKPSVSNSFMS
Trigger: GGACATGAATGAATTTGAGACGGAAGGCTTCTTTGCTTTGCATCAGCGCCGGGGTGCCATCAAGCAGGCAAAGGTCCACCACGTCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGTGAACTCGTGGCACTaGACGTGGTGGACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPVNSWH*TWWTFA
Trigger: GGCAAAGGTCCACCACGTCAAGTGCCACGAGTTCAC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAGTGAACTCGTGGCACTaGACGTGGTGGACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAVNSWH*TWWTFA
Trigger: GGCAAAGGTCCACCACGTCAAGTGCCACGAGTTCAC...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCATCACACTTGAGTCCTaGCCGTGCCAGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSITLES*PCQSPQ
Trigger: CTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGAT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCCACATGCATCACACTaGAGTCCTTGCCGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRPHASH*SPCRAS
Trigger: ACTGGCACGGCAAGGACTCAAGTGTGATGCATGTGG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCGGCCTTGCTTCATTTTaGATGGAGCATGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSGLASF*MEHGRP
Trigger: TGGTCTCCCATGCTCCATCAAAAATGAAGCAAGGCC...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGGGCCTTGCTTCATTTTaGATGGAGCATGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLGLASF*MEHGRP
Trigger: TGGTCTCCCATGCTCCATCAAAAATGAAGCAAGGCC...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGGGGGCCGTTTCAGTCTaGAGACGTCTGTACTCCGTT +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRGAVSV*RRLYSV
Trigger: AACGGAGTACAGACGTCTCAAGACTGAAACGGCCCC...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGAATTGCTGCATTGCATaGTCGGCACTGGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRNCCIA*SALVAL
Trigger: CAGGGCTACCAGTGCCGACAATGCAATGCAGCAATT...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCACCACATGCATCACACTaGAGTCCTTGCCGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAPHASH*SPCRAS
Trigger: ACTGGCACGGCAAGGACTCAAGTGTGATGCATGTGG...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTTTATGCCACAAAGGTaGGCCACCTTTGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLFMPQR*ATFVWH
Trigger: ATGCCAGACAAAGGTGGCCAACCTTTGTGGCATAAA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGCCTAACATGTTCTCCTaGCACATTCCAAAATCCGCG +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLPNMFS*HIPKSA
Trigger: CGCGGATTTTGGAATGTGCAAGGAGAACATGTTAGG...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTCAACAAGCATTTCATaGATCAGCAGTTGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLSTSIS*ISSWRP
Trigger: TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCGGGGCCGTTTCAGTCTaGAGACGTCTGTACTCCGTT +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSGAVSV*RRLYSV
Trigger: AACGGAGTACAGACGTCTCAAGACTGAAACGGCCCC...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGGGGCCGTTTCAGTCTaGAGACGTCTGTACTCCGTT +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPGAVSV*RRLYSV
Trigger: AACGGAGTACAGACGTCTCAAGACTGAAACGGCCCC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCAGCATGCATGGGCCATaGATCTTGAATGATGCCTAC +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSMHGP*ILNDAY
Trigger: GTAGGCATCATTCAAGATCAATGGCCCATGCATGCT...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGAGCATGCATGGGCCATaGATCTTGAATGATGCCTAC +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLSMHGP*ILNDAY
Trigger: GTAGGCATCATTCAAGATCAATGGCCCATGCATGCT...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 90 bp GAGGTTTCAGCTCTAACCATATTTCTGTCTTCCCGTTGTTCTTCCTaGACCTCTCAGCCAGCGAGTAGAGCTCCACGGTGGTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: EVSALTIFLSSRCSS*TSQPASRAPRWFQR
Trigger: TCTCTGAAACCACCGTGGAGCTCTACTCGCTGGCTGAGAGGTGCAGGAAGAACAACGGGAAGACAGAAATATGGTTAGAGCTGAAACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGATGAGGTCCACGTTTTaGCCTTTCACAATGATCTGC +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLMRSTF*PFTMIC
Trigger: GCAGATCATTGTGAAAGGCAAAAACGTGGACCTCAT...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCAATTGCTGCATTGCATaGTCGGCACTGGTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: GTQAVSLEPVPREKANSFNCCIA*SALVAL
Trigger: CAGGGCTACCAGTGCCGACAATGCAATGCAGCAATT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTCTGCCAGGAAGACCTaGCCAAAACTTCCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSSARKT*PKLPFP
Trigger: GGGGAAAGGAAGTTTTGGCAAGGTCTTCCTGGCAGA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACTGGAAAGGTCGAACTaGTGGCAGCTTTGGATGTGG +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPLERSN*WQLWMW
Trigger: CCACATCCAAAGCTGCCACAAGTTCGACCTTTCCAG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACTGGAAAGGTCGAACTaGTGGCAGCTTTGGATGTGG +
Preference number: 5 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRLERSN*WQLWMW
Trigger: CCACATCCAAAGCTGCCACAAGTTCGACCTTTCCAG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCTGGAAAGGTCGAACTaGTGGCAGCTTTGGATGTGG +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSLERSN*WQLWMW
Trigger: CCACATCCAAAGCTGCCACAAGTTCGACCTTTCCAG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGCAGAAGGTATTCGTCTaGGCATCTCCTAACATGTTC +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLQKVFV*ASPNMF
Trigger: GAACATGTTAGGAGATGCCAAGACGAATACCTTCTG...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATTCTGGTCCATGCTGTaGATCAGTGCTCTGTCGGCA +
Preference number: 5 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAFWSML*ISALSA
Trigger: TGCCGACAGAGCACTGATCAACAGCATGGACCAGAA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTTGCAGTATCAAGTCTaGAAACCTTTCCAAGTGCGG +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSLQYQV*KPFQVR
Trigger: CCGCACTTGGAAAGGTTTCAAGACTTGATACTGCAA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCATGGGCCATTGATCTaGAATGATGCCTACGGAGGG +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYHGPLI*NDAYGG
Trigger: CCCTCCGTAGGCATCATTCAAGATCAATGGCCCATG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCACATGGGCCATTGATCTaGAATGATGCCTACGGAGGG +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPHGPLI*NDAYGG
Trigger: CCCTCCGTAGGCATCATTCAAGATCAATGGCCCATG...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGAAATGGCGACATGGTaGCGCCCTGGAGCGAGCACG +
Preference number: 5 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQEMATW*RPGAST
Trigger: CGTGCTCGCTCCAGGGCGCAACCATGTCGCCATTTC...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCATGACTCTTCCCTTGTaGATATGGGCATCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSMTLPL*IWASKV
Trigger: CACTTTTGATGCCCATATCAACAAGGGAAGAGTCAT...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTGTGAACTCGTGGCACTaGACGTGGTGGACCTTTGCC +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLVNSWH*TWWTFA
Trigger: GGCAAAGGTCCACCACGTCAAGTGCCACGAGTTCAC...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGATTTTGAATCTCTCCTaGTGGAACATGGTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLILNLS*WNMVSR
Trigger: CCGAGAAACCATGTTCCACAAGGAGAGATTCAAAAT...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTGTGGCATGTCAATTTaGAATCTCTCCTTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLCGMSI*NLSLWN
Trigger: GTTCCACAAGGAGAGATTCAAAATTGACATGCCACA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTGTGGCATGTCAATTTaGAATCTCTCCTTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSCGMSI*NLSLWN
Trigger: GTTCCACAAGGAGAGATTCAAAATTGACATGCCACA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAGGCCTTGCTTCATTTTaGATGGAGCATGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPGLASF*MEHGRP
Trigger: TGGTCTCCCATGCTCCATCAAAAATGAAGCAAGGCC...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATGGCCTTGCTTCATTTTaGATGGAGCATGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYGLASF*MEHGRP
Trigger: TGGTCTCCCATGCTCCATCAAAAATGAAGCAAGGCC...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACTGGAAAGGTCGAACTaGTGGCAGCTTTGGATGTGG +
Preference number: 5 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGLERSN*WQLWMW
Trigger: CCACATCCAAAGCTGCCACAAGTTCGACCTTTCCAG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCCTAACATGTTCTCCTaGCACATTCCAAAATCCGCG +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRPNMFS*HIPKSA
Trigger: CGCGGATTTTGGAATGTGCAAGGAGAACATGTTAGG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATCAAGTTCCTCCCAGTaGATCTCCCGAAACAAAGGG +
Preference number: 5 (lower is better)
Translates to: HQSWHEKGLRFFSQETYASSSSQ*ISRNKG
Trigger: CCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTGA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTCAAGTTCCTCCCAGTaGATCTCCCGAAACAAAGGG +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYSSSSQ*ISRNKG
Trigger: CCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTGA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATTCTGGTCCATGCTGTaGATCAGTGCTCTGTCGGCA +
Preference number: 5 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGFWSML*ISALSA
Trigger: TGCCGACAGAGCACTGATCAACAGCATGGACCAGAA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCACGTCTGTACTCCGTTaGCCCCTGATTCAACAAGCA +
Preference number: 5 (lower is better)
Translates to: GTQAVSLEPVPREKANSFTSVLR*PLIQQA
Trigger: TGCTTGTTGAATCAGGGGCAAACGGAGTACAGACGT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAACGTCTGTACTCCGTTaGCCCCTGATTCAACAAGCA +
Preference number: 5 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRTSVLR*PLIQQA
Trigger: TGCTTGTTGAATCAGGGGCAAACGGAGTACAGACGT...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGACATGGGCCATTGATCTaGAATGATGCCTACGGAGGG +
Preference number: 5 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGHGPLI*NDAYGG
Trigger: CCCTCCGTAGGCATCATTCAAGATCAATGGCCCATG...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 90 bp GACTCTTCCCTTGTTGATATGGGCATCAAAAGTGCTGTCCCAGGGTaGGTACATGGTAGGCTTTTTCTGGATATACATCTGCCCGTTCTC +
Preference number: 5 (lower is better)
Translates to: DSSLVDMGIKSAVPG*VHGRLFLDIHLPVL
Trigger: GAGAACGGGCAGATGTATATCCAGAAAAAGCCTACCATGTACCCACCCTGGGACAGCACTTTTGATGCCCATATCAACAAGGGAAGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCATTTCTGTCTTCCCGTaGTTCTTCCTGCACCTCTCA +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSISVFP*FFLHLS
Trigger: TGAGAGGTGCAGGAAGAACAACGGGAAGACAGAAAT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAATTTCTGTCTTCCCGTaGTTCTTCCTGCACCTCTCA +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPISVFP*FFLHLS
Trigger: TGAGAGGTGCAGGAAGAACAACGGGAAGACAGAAAT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATATGGTTTCTCGGCTATaGATAGCTGATCCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYMVSRL*IADPVH
Trigger: GTGCACAGGATCAGCTATCAATAGCCGAGAAACCAT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAATGGTTTCTCGGCTATaGATAGCTGATCCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRMVSRL*IADPVH
Trigger: GTGCACAGGATCAGCTATCAATAGCCGAGAAACCAT...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCATGGTTTCTCGGCTATaGATAGCTGATCCTGTGCAC +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSMVSRL*IADPVH
Trigger: GTGCACAGGATCAGCTATCAATAGCCGAGAAACCAT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTCCACATGCATCACACTaGAGTCCTTGCCGTGCCAGT +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLPHASH*SPCRAS
Trigger: ACTGGCACGGCAAGGACTCAAGTGTGATGCATGTGG...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTTTATGCCACAAAGGTaGGCCACCTTTGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: GTQAVSLEPVPREKANSFFMPQR*ATFVWH
Trigger: ATGCCAGACAAAGGTGGCCAACCTTTGTGGCATAAA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGATTTATGCCACAAAGGTaGGCCACCTTTGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRFMPQR*ATFVWH
Trigger: ATGCCAGACAAAGGTGGCCAACCTTTGTGGCATAAA...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGACCTAACATGTTCTCCTaGCACATTCCAAAATCCGCG +
Preference number: 5 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRPNMFS*HIPKSA
Trigger: CGCGGATTTTGGAATGTGCAAGGAGAACATGTTAGG...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGCAGAAGGTATTCGTCTaGGCATCTCCTAACATGTTC +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRQKVFV*ASPNMF
Trigger: GAACATGTTAGGAGATGCCAAGACGAATACCTTCTG...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGATCAAGTTCCTCCCAGTaGATCTCCCGAAACAAAGGG +
Preference number: 5 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGSSSSQ*ISRNKG
Trigger: CCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTGA...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTCCCAAGCAGTGTCTCTaGAACCAGTTCCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLPKQCL*NQFPGR
Trigger: TCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGG...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTTGCAGTATCAAGTCTaGAAACCTTTCCAAGTGCGG +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRLQYQV*KPFQVR
Trigger: CCGCACTTGGAAAGGTTTCAAGACTTGATACTGCAA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATCAACAAGCATTTCATaGATCAGCAGTTGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPSTSIS*ISSWRP
Trigger: TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAACGTCTGTACTCCGTTaGCCCCTGATTCAACAAGCA +
Preference number: 5 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGTSVLR*PLIQQA
Trigger: TGCTTGTTGAATCAGGGGCAAACGGAGTACAGACGT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTGGGGCCGTTTCAGTCTaGAGACGTCTGTACTCCGTT +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLGAVSV*RRLYSV
Trigger: AACGGAGTACAGACGTCTCAAGACTGAAACGGCCCC...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAAGCATGCATGGGCCATaGATCTTGAATGATGCCTAC +
Preference number: 5 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRSMHGP*ILNDAY
Trigger: GTAGGCATCATTCAAGATCAATGGCCCATGCATGCT...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATAGCATGCATGGGCCATaGATCTTGAATGATGCCTAC +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYSMHGP*ILNDAY
Trigger: GTAGGCATCATTCAAGATCAATGGCCCATGCATGCT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTGAGATCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTCTAATTCAACTCAATaGACTGCTGCAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: VRSATRPGNGAVSVLRRLSNSTQ*TAANSM
Trigger: CATGCTGTTTGCAGCAGTCAATTGAGTTGAATTAGA...CAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGATCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCTAATTCAACTCAATaGACTGCTGCAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSNSTQ*TAANSM
Trigger: CATGCTGTTTGCAGCAGTCAATTGAGTTGAATTAGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 90 bp CAAATGACAGCCGGGGCTTCTCGTTTAAGAATTCTTTGTCGAAATTaGTGCAGTCAAATGGTGATTTCACTTTCGGCCGGAACGGTGGGT +
Preference number: 5 (lower is better)
Translates to: QMTAGASRLRILCRN*CSQMVISLSAGTVG
Trigger: ACCCACCGTTCCGGCCGAAAGTGAAATCACCATTTGACTGCAGCAATTTCGACAAAGAATTCTTAAACGAGAAGCCCCGGCTGTCATTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAATGAGGTCCACGTTTTaGCCTTTCACAATGATCTGC +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPMRSTF*PFTMIC
Trigger: GCAGATCATTGTGAAAGGCAAAAACGTGGACCTCAT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAATGAGGTCCACGTTTTaGCCTTTCACAATGATCTGC +
Preference number: 5 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAMRSTF*PFTMIC
Trigger: GCAGATCATTGTGAAAGGCAAAAACGTGGACCTCAT...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAATTTCTGTCTTCCCGTaGTTCTTCCTGCACCTCTCA +
Preference number: 5 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGISVFP*FFLHLS
Trigger: TGAGAGGTGCAGGAAGAACAACGGGAAGACAGAAAT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATCAGAAGGTATTCGTCTaGGCATCTCCTAACATGTTC +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYQKVFV*ASPNMF
Trigger: GAACATGTTAGGAGATGCCAAGACGAATACCTTCTG...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCCAGAAGGTATTCGTCTaGGCATCTCCTAACATGTTC +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSQKVFV*ASPNMF
Trigger: GAACATGTTAGGAGATGCCAAGACGAATACCTTCTG...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TCCGCTACTAGACCAGGCAATGGGGCCGTTTCAGTCTTGAGACGTCTGTACTCCTCGTTTAAGAATTCTTaGTCGAAATTGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: SATRPGNGAVSVLRRLYSSFKNS*SKLLQS
Trigger: TGACTGCAGCAATTTCGACAAAGAATTCTTAAACGA...GGAGTACAGACGTCTCAAGACTGAAACGGCCCCATTGCCTGGTCTAGTAGCGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTTGCAGTATCAAGTCTaGAAACCTTTCCAAGTGCGG +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSLQYQV*KPFQVR
Trigger: CCGCACTTGGAAAGGTTTCAAGACTTGATACTGCAA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCAATGACTCTTCCCTTGTaGATATGGGCATCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: HQSWHEKGLRFFSQETYAMTLPL*IWASKV
Trigger: CACTTTTGATGCCCATATCAACAAGGGAAGAGTCAT...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCATGACTCTTCCCTTGTaGATATGGGCATCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSMTLPL*IWASKV
Trigger: CACTTTTGATGCCCATATCAACAAGGGAAGAGTCAT...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTGCATGACTCTTCCCTaGTTGATATGGGCATCAAAA +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYCMTLP*LIWASK
Trigger: TTTTGATGCCCATATCAACAAGGGAAGAGTCATGCA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTGCATGACTCTTCCCTaGTTGATATGGGCATCAAAA +
Preference number: 5 (lower is better)
Translates to: GTQAVSLEPVPREKANSFCMTLP*LIWASK
Trigger: TTTTGATGCCCATATCAACAAGGGAAGAGTCATGCA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAGACTTATGCATGCATGACTCTTCCCTaGTTGATATGGGCATCAAAA +
Preference number: 5 (lower is better)
Translates to: HQSWHEKGLRFFSQETYACMTLP*LIWASK
Trigger: TTTTGATGCCCATATCAACAAGGGAAGAGTCATGCA...TGCATAAGTCTCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAATGAGGTCCACGTTTTaGCCTTTCACAATGATCTGC +
Preference number: 5 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGMRSTF*PFTMIC
Trigger: GCAGATCATTGTGAAAGGCAAAAACGTGGACCTCAT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCTGTGGCATGTCAATTTaGAATCTCTCCTTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: GTQAVSLEPVPREKANSFCGMSI*NLSLWN
Trigger: GTTCCACAAGGAGAGATTCAAAATTGACATGCCACA...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTATCACACTTGAGTCCTaGCCGTGCCAGTCCCCACAG +
Preference number: 5 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVITLES*PCQSPQ
Trigger: CTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGAT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCAAGAGATGGTCTTTCTTaGTTCAGTTCAGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPRDGLS*FSSGSG
Trigger: TCCAGAACCTGAACTGAACAAAGAAAGACCATCTCT...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATAGAGATGGTCTTTCTTaGTTCAGTTCAGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYRDGLS*FSSGSG
Trigger: TCCAGAACCTGAACTGAACAAAGAAAGACCATCTCT...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GGAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCAGAGATGGTCTTTCTTaGTTCAGTTCAGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: GTQAVSLEPVPREKANSFRDGLS*FSSGSG
Trigger: TCCAGAACCTGAACTGAACAAAGAAAGACCATCTCT...GAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTCAAGTTCCTCCCAGTaGATCTCCCGAAACAAAGGG +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLSSSSQ*ISRNKG
Trigger: CCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTGA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAACCCAAGCAGTGTCTCTaGAACCAGTTCCCAGGGAGA +
Preference number: 5 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQPKQCL*NQFPGR
Trigger: TCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGG...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTACGTCTGTACTCCGTTaGCCCCTGATTCAACAAGCA +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLTSVLR*PLIQQA
Trigger: TGCTTGTTGAATCAGGGGCAAACGGAGTACAGACGT...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 90 bp GTGGTTTCAGAGATGAGGTCCACGTTTTTGCCTTTCACAATGATCTaGATGACTCTTCCCTTGTTGATATGGGCATCAAAAGTGCTGTCC +
Preference number: 5 (lower is better)
Translates to: VVSEMRSTFLPFTMI*MTLPLLIWASKVLS
Trigger: GGACAGCACTTTTGATGCCCATATCAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGGCAAAAACGTGGACCTCATCTCTGAAACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 90 bp TTTTTGCCTTTCACAATGATCTGCATGACTCTTCCCTTGTTGATATaGGCATCAAAAGTGCTGTCCCAGGGTGGGTACATGGTAGGCTTT +
Preference number: 5 (lower is better)
Translates to: FLPFTMICMTLPLLI*ASKVLSQGGYMVGF
Trigger: AAAGCCTACCATGTACCCACCCTGGGACAGCACTTTTGATGCCCATATCAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGGCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 90 bp ATCTGCAGAGATGGTCTTTCTTTGTTCAGTTCAGGTTCTGGAAGATaGCACATTTTATCCACCTCATCCAACGGAGACTCCCAGGAAATG +
Preference number: 5 (lower is better)
Translates to: ICRDGLSLFSSGSGR*HILSTSSNGDSQEM
Trigger: CATTTCCTGGGAGTCTCCGTTGGATGAGGTGGATAAAATGTGCCATCTTCCAGAACCTGAACTGAACAAAGAAAGACCATCTCTGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp GCAAACAGCATGCATGGGCCATTGATCTTGAATGATGCCTACGGAGGGGCTTATTTTCCAGAAAGTATCTaGCATTCATTAGCATTCGGC +
Preference number: 5 (lower is better)
Translates to: ANSMHGPLILNDAYGGAYFPESI*HSLAFG
Trigger: GCCGAATGCTAATGAATGCAAGATACTTTCTGGAAA...ATAAGCCCCTCCGTAGGCATCATTCAAGATCAATGGCCCATGCATGCTGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS-3UTR CAA 90 bp GAACCCAAGCAGTGTCTCTTGAACCAGTTCCCAGGGAGAAGGCAAATTCTTTCCTTTCCAGAAAGTATCTaGCATTCATTAGCATTCGGC +
Preference number: 5 (lower is better)
Translates to: EPKQCLLNQFPGRRQILSFPESI*HSLAFG
Trigger: GCCGAATGCTAATGAATGCAAGATACTTTCTGGAAA...GGAAAGAATTTGCCTTCTCCCTGGGAACTGGTTCAAGAGACACTGCTTGGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGATTCATTCATGTCCTTaGTGTCACTCATTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRIHSCP*CHSFPE
Trigger: TTCTGGAAATGAGTGACACAAAGGACATGAATGAAT...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS-3UTR CAA 90 bp GTCATGAAATCACCAGTCATGGCACGAGAAGGGGTTAAGGTTCTTTTCCCAGGAATTTTGAATCTCTCCTaGTGGAACATGGTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: VMKSPVMAREGVKVLFPGILNLS*WNMVSR
Trigger: CCGAGAAACCATGTTCCACAAGGAGAGATTCAAAAT...TCCTGGGAAAAGAACCTTAACCCCTTCTCGTGCCATGACTGGTGATTTCATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTTTATGCCACAAAGGTaGGCCACCTTTGTCTGGCAT +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLFMPQR*ATFVWH
Trigger: ATGCCAGACAAAGGTGGCCAACCTTTGTGGCATAAA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AATGACCTAACTTCAGGAGCGTCTGTGAGACATGTCAGGAGACGAGACACACGGTCGTTTAAGAATTCTTaGTCGAAATTGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: NDLTSGASVRHVRRRDTRSFKNS*SKLLQS
Trigger: TGACTGCAGCAATTTCGACAAAGAATTCTTAAACGA...CCGTGTGTCTCGTCTCCTGACATGTCTCACAGACGCTCCTGAAGTTAGGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATTCTGGTCCATGCTGTaGATCAGTGCTCTGTCGGCA +
Preference number: 5 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQFWSML*ISALSA
Trigger: TGCCGACAGAGCACTGATCAACAGCATGGACCAGAA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTCAACAAGCATTTCATaGATCAGCAGTTGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLSTSIS*ISSWRP
Trigger: TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp ATGATGCCTACGGAGGGGCTTATGAGTCATGAAATCACCAGTCATGGCACGAGAATTCATTCATGTCCTTaGTGTCACTCATTTCCAGAA +
Preference number: 5 (lower is better)
Translates to: MMPTEGLMSHEITSHGTRIHSCP*CHSFPE
Trigger: TTCTGGAAATGAGTGACACAAAGGACATGAATGAAT...TCTCGTGCCATGACTGGTGATTTCATGACTCATAAGCCCCTCCGTAGGCATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS-3UTR CAA 90 bp ACTCCGTTTGCCCCTGATTCAACAAGCATTTCATTGATCAGCAGTTGGCGCCCATCGTTTAAGAATTCTTaGTCGAAATTGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: TPFAPDSTSISLISSWRPSFKNS*SKLLQS
Trigger: TGACTGCAGCAATTTCGACAAAGAATTCTTAAACGA...TGGGCGCCAACTGCTGATCAATGAAATGCTTGTTGAATCAGGGGCAAACGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTTTCTGGTCCATGCTGTaGATCAGTGCTCTGTCGGCA +
Preference number: 5 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVFWSML*ISALSA
Trigger: TGCCGACAGAGCACTGATCAACAGCATGGACCAGAA...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAATTTCTGTCTTCCCGTaGTTCTTCCTGCACCTCTCA +
Preference number: 5 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQISVFP*FFLHLS
Trigger: TGAGAGGTGCAGGAAGAACAACGGGAAGACAGAAAT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAATGACTCTTCCCTTGTaGATATGGGCATCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQMTLPL*IWASKV
Trigger: CACTTTTGATGCCCATATCAACAAGGGAAGAGTCAT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAATTTTGAATCTCTCCTaGTGGAACATGGTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQILNLS*WNMVSR
Trigger: CCGAGAAACCATGTTCCACAAGGAGAGATTCAAAAT...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp AAGTCACATGGGGGCGAACGGGTCTCAGTCTTTATTGTTGAGTGTTTCTTTCTTTCGTTTAAGAATTCTTaGTCGAAATTGCTGCAGTCA +
Preference number: 5 (lower is better)
Translates to: KSHGGERVSVFIVECFFLSFKNS*SKLLQS
Trigger: TGACTGCAGCAATTTCGACAAAGAATTCTTAAACGA...AAGAAAGAAACACTCAACAATAAAGACTGAGACCCGTTCGCCCCCATGTGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTTGCATGACTCTTCCCTaGTTGATATGGGCATCAAAA +
Preference number: 5 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVCMTLP*LIWASK
Trigger: TTTTGATGCCCATATCAACAAGGGAAGAGTCATGCA...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTATTTTGAATCTCTCCTaGTGGAACATGGTTTCTCGG +
Preference number: 5 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVILNLS*WNMVSR
Trigger: CCGAGAAACCATGTTCCACAAGGAGAGATTCAAAAT...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTTGTGGCATGTCAATTTaGAATCTCTCCTTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVCGMSI*NLSLWN
Trigger: GTTCCACAAGGAGAGATTCAAAATTGACATGCCACA...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp CTCTTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAATCTAATTCAACTCAATaGACTGCTGCAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: LLTMDFMPNQDEWICRSQSNSTQ*TAANSM
Trigger: CATGCTGTTTGCAGCAGTCAATTGAGTTGAATTAGA...TTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS-3UTR CAA 90 bp TTGACCATGGATTTCATGCCCAATCAGGATGAATGGATTTGTAGATCTCAAGTTTCTAATTCAACTCAATaGACTGCTGCAAACAGCATG +
Preference number: 5 (lower is better)
Translates to: LTMDFMPNQDEWICRSQVSNSTQ*TAANSM
Trigger: CATGCTGTTTGCAGCAGTCAATTGAGTTGAATTAGA...AACTTGAGATCTACAAATCCATTCATCCTGATTGGGCATGAAATCCATGGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 72 bp CATGGTTGCGCCCTGGAGCGAGCACGGCGCCGCTGCTaGCCGGTGGCGCTGGGACTGCGCGGGGACTGCGCG +
Preference number: 6 (lower is better)
Translates to: HGCALERARRRC*PVALGLRGDCA
Trigger: CGCGCAGTCCCCGCGCAGTCCCAGCGCCACCGGGCAGCAGCGGCGCCGTGCTCGCTCCAGGGCGCAACCATG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS GCA 72 bp CGACATGGTTGCGCCCTGGAGCGAGCACGGCGCCGCTaGTGCCCGGTGGCGCTGGGACTGCGCGGGGACTGC +
Preference number: 6 (lower is better)
Translates to: RHGCALERARRR*CPVALGLRGDC
Trigger: GCAGTCCCCGCGCAGTCCCAGCGCCACCGGGCAGCAGCGGCGCCGTGCTCGCTCCAGGGCGCAACCATGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS GCA 72 bp GGCAGTGAACTCGTGGCACTTGACGTGGTGGACCTTTaGCTGCTTGATGGCACCCCGGCGCTGATGCAAAGC +
Preference number: 6 (lower is better)
Translates to: GSELVALDVVDL*LLDGTPALMQS
Trigger: GCTTTGCATCAGCGCCGGGGTGCCATCAAGCAGGCAAAGGTCCACCACGTCAAGTGCCACGAGTTCACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 72 bp CCCGCAGTCAAAGTTGGACAAGCCAATCCGAAGAAATaGCGACATGGTTGCGCCCTGGAGCGAGCACGGCGC +
Preference number: 6 (lower is better)
Translates to: PAVKVGQANPKK*RHGCALERARR
Trigger: GCGCCGTGCTCGCTCCAGGGCGCAACCATGTCGCCATTTCTTCGGATTGGCTTGTCCAACTTTGACTGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
CDS CAA 90 bp GGCCGGAACGGTGGGTCAATCTCCTTCCGTTCAAGTTCCTCCCAGTaGATCTCCCGAAACAAAGGGTGCTGGCGGATGTCTCCCCTCACG +
Preference number: 6 (lower is better)
Translates to: GRNGGSISFRSSSSQ*ISRNKGCWRMSPLT
Trigger: CGTGAGGGGAGACATCCGCCAGCACCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTGAACGGAAGGAGATTGACCCACCGTTCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 72 bp TGCACATTCATGCCACATGCATCACACTTGAGTCCTTaGCGTGCCAGTCCCCACAGCAGGGTCCCACAGTGT +
Preference number: 6 (lower is better)
Translates to: CTFMPHASHLSP*RASPHSRVPQC
Trigger: ACACTGTGGGACCCTGCTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGATGCATGTGGCATGAATGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 72 bp ATTCATGCCACATGCATCACACTTGAGTCCTTGCCGTaGCAGTCCCCACAGCAGGGTCCCACAGTGTTCACA +
Preference number: 6 (lower is better)
Translates to: IHATCITLESLP*QSPQQGPTVFT
Trigger: TGTGAACACTGTGGGACCCTGCTGTGGGGACTGGCACGGCAAGGACTCAAGTGTGATGCATGTGGCATGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS TCA 72 bp TGGTGGACCTTTGCCTGCTTGATGGCACCCCGGCGCTaGTGCAAAGCAAAGAAGCCTTCCGTCTCAAATTCA +
Preference number: 6 (lower is better)
Translates to: WWTFACLMAPRR*CKAKKPSVSNS
Trigger: TGAATTTGAGACGGAAGGCTTCTTTGCTTTGCATCAGCGCCGGGGTGCCATCAAGCAGGCAAAGGTCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 72 bp GCTCTAACCATATTTCTGTCTTCCCGTTGTTCTTCCTaGACCTCTCAGCCAGCGAGTAGAGCTCCACGGTGG +
Preference number: 6 (lower is better)
Translates to: ALTIFLSSRCSS*TSQPASRAPRW
Trigger: CCACCGTGGAGCTCTACTCGCTGGCTGAGAGGTGCAGGAAGAACAACGGGAAGACAGAAATATGGTTAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS CCA 72 bp CACCAGAAGGTCCTTTGCTTCCTTCTCCAGCCACCGTaGGTAAAAGGGATTGTCCATGCGGATGGAGTGGAA +
Preference number: 6 (lower is better)
Translates to: HQKVLCFLLQPP*VKGIVHADGVE
Trigger: TTCCACTCCATCCGCATGGACAATCCCTTTTACCCACGGTGGCTGGAGAAGGAAGCAAAGGACCTTCTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS CAA 72 bp GGTGGGTCAATCTCCTTCCGTTCAAGTTCCTCCCAGTaGATCTCCCGAAACAAAGGGTGCTGGCGGATGTCT +
Preference number: 6 (lower is better)
Translates to: GGSISFRSSSSQ*ISRNKGCWRMS
Trigger: AGACATCCGCCAGCACCCTTTGTTTCGGGAGATCAACTGGGAGGAACTTGAACGGAAGGAGATTGACCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS GCA 72 bp AGGTTCTCGCACGAAGAGCTTCACCAGAAGGTCCTTTaGTTCCTTCTCCAGCCACCGTGGGTAAAAGGGATT +
Preference number: 6 (lower is better)
Translates to: RFSHEELHQKVL*FLLQPPWVKGI
Trigger: AATCCCTTTTACCCACGGTGGCTGGAGAAGGAAGCAAAGGACCTTCTGGTGAAGCTCTTCGTGCGAGAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000539722.5
ENST00000610727.1
CDS GCA 72 bp TTTGTGTCCATATTTCTGTCTTCCCGTTGTTCTTCCTaGACCTCTCAGCCAGCGAGTAGAGCTCCACGGTGG +
Preference number: 6 (lower is better)
Translates to: FVSIFLSSRCSS*TSQPASRAPRW
Trigger: CCACCGTGGAGCTCTACTCGCTGGCTGAGAGGTGCAGGAAGAACAACGGGAAGACAGAAATATGGACACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539722.5
CDS CAA 72 bp CCCGGTGTCGGTAAACATGGCGGCCTTGCTTCATTTTaGATGGAGCATGGGAGACCAATTTCAACCGGACCT +
Preference number: 6 (lower is better)
Translates to: PGVGKHGGLASF*MEHGRPISTGP
Trigger: AGGTCCGGTTGAAATTGGTCTCCCATGCTCCATCAAAAATGAAGCAAGGCCGCCATGTTTACCGACACCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 72 bp CTCTTAAGCAGCGAGCCTGTTGAGTGCTCTCAATCATaGCCAGCGCTTCAGCCATTAGCTTCTGGTTTATGC +
Preference number: 6 (lower is better)
Translates to: LLSSEPVECSQS*PALQPLASGLC
Trigger: GCATAAACCAGAAGCTAATGGCTGAAGCGCTGGCCATGATTGAGAGCACTCAACAGGCTCGCTGCTTAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 72 bp GCTCTGGAAAGGTCGAACTTGTGGCAGCTTTGGATGTaGTACATTAAGTCCCCTCCGTTGAGGTACTCCATC +
Preference number: 6 (lower is better)
Translates to: ALERSNLWQLWM*YIKSPPLRYSI
Trigger: GATGGAGTACCTCAACGGAGGGGACTTAATGTACCACATCCAAAGCTGCCACAAGTTCGACCTTTCCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 90 bp TCTCTTTTTCCCGGTGTCGGTAAACATGGCGGCCTTGCTTCATTTTaGATGGAGCATGGGAGACCAATTTCAACCGGACCTTCTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SLFPGVGKHGGLASF*MEHGRPISTGPSLK
Trigger: CTTCAGAGAAGGTCCGGTTGAAATTGGTCTCCCATGCTCCATCAAAAATGAAGCAAGGCCGCCATGTTTACCGACACCGGGAAAAAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 90 bp GCAAATGACAGCCGGGGCTTCTCGTTTAAGAATTCTTTGTCGAAATaGCTGCAGTCAAATGGTGATTTCACTTTCGGCCGGAACGGTGGG +
Preference number: 6 (lower is better)
Translates to: ANDSRGFSFKNSLSK*LQSNGDFTFGRNGG
Trigger: CCCACCGTTCCGGCCGAAAGTGAAATCACCATTTGACTGCAGCAATTTCGACAAAGAATTCTTAAACGAGAAGCCCCGGCTGTCATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 90 bp GCTCTGTCGGCAAATGACAGCCGGGGCTTCTCGTTTAAGAATTCTTaGTCGAAATTGCTGCAGTCAAATGGTGATTTCACTTTCGGCCGG +
Preference number: 6 (lower is better)
Translates to: ALSANDSRGFSFKNS*SKLLQSNGDFTFGR
Trigger: CCGGCCGAAAGTGAAATCACCATTTGACTGCAGCAATTTCGACAAAGAATTCTTAAACGAGAAGCCCCGGCTGTCATTTGCCGACAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS TCA 72 bp TGGAGCATGGGAGACCAATTTCAACCGGACCTTCTCTaGAGATCTGTTCAGTATCTCTTAAGCAGCGAGCCT +
Preference number: 6 (lower is better)
Translates to: WSMGDQFQPDLL*RSVQYLLSSEP
Trigger: AGGCTCGCTGCTTAAGAGATACTGAACAGATCTTCAGAGAAGGTCCGGTTGAAATTGGTCTCCCATGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 90 bp AGGTCCACGTTTTTGCCTTTCACAATGATCTGCATGACTCTTCCCTaGTTGATATGGGCATCAAAAGTGCTGTCCCAGGGTGGGTACATG +
Preference number: 6 (lower is better)
Translates to: RSTFLPFTMICMTLP*LIWASKVLSQGGYM
Trigger: CATGTACCCACCCTGGGACAGCACTTTTGATGCCCATATCAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGGCAAAAACGTGGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 90 bp TCCACGTTTTTGCCTTTCACAATGATCTGCATGACTCTTCCCTTGTaGATATGGGCATCAAAAGTGCTGTCCCAGGGTGGGTACATGGTA +
Preference number: 6 (lower is better)
Translates to: STFLPFTMICMTLPL*IWASKVLSQGGYMV
Trigger: TACCATGTACCCACCCTGGGACAGCACTTTTGATGCCCATATCAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGGCAAAAACGTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 72 bp AGCCGGGGCTTCTCGTTTAAGAATTCTTTGTCGAAATaGCTGCAGTCAAATGGTGATTTCACTTTCGGCCGG +
Preference number: 6 (lower is better)
Translates to: SRGFSFKNSLSK*LQSNGDFTFGR
Trigger: CCGGCCGAAAGTGAAATCACCATTTGACTGCAGCAATTTCGACAAAGAATTCTTAAACGAGAAGCCCCGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 72 bp CTTGTTGATATGGGCATCAAAAGTGCTGTCCCAGGGTaGGTACATGGTAGGCTTTTTCTGGATATACATCTG +
Preference number: 6 (lower is better)
Translates to: LVDMGIKSAVPG*VHGRLFLDIHL
Trigger: CAGATGTATATCCAGAAAAAGCCTACCATGTACCCACCCTGGGACAGCACTTTTGATGCCCATATCAACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CCA 72 bp GATGGTCTTTCTTTGTTCAGTTCAGGTTCTGGAAGATaGCACATTTTATCCACCTCATCCAACGGAGACTCC +
Preference number: 6 (lower is better)
Translates to: DGLSLFSSGSGR*HILSTSSNGDS
Trigger: GGAGTCTCCGTTGGATGAGGTGGATAAAATGTGCCATCTTCCAGAACCTGAACTGAACAAAGAAAGACCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 72 bp TTTTTGCCTTTCACAATGATCTGCATGACTCTTCCCTaGTTGATATGGGCATCAAAAGTGCTGTCCCAGGGT +
Preference number: 6 (lower is better)
Translates to: FLPFTMICMTLP*LIWASKVLSQG
Trigger: ACCCTGGGACAGCACTTTTGATGCCCATATCAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGGCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS TCA 72 bp TCCAGAAAGTATCTTGCATTCATTAGCATTCGGCCTTaGGGTTTCAGCTCTAACCATATTTCTGTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: SRKYLAFISIRP*GFSSNHISVFP
Trigger: CGGGAAGACAGAAATATGGTTAGAGCTGAAACCTCAAGGCCGAATGCTAATGAATGCAAGATACTTTCTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS GCA 72 bp GAGATGAGGTCCACGTTTTTGCCTTTCACAATGATCTaGATGACTCTTCCCTTGTTGATATGGGCATCAAAA +
Preference number: 6 (lower is better)
Translates to: EMRSTFLPFTMI*MTLPLLIWASK
Trigger: TTTTGATGCCCATATCAACAAGGGAAGAGTCATGCAGATCATTGTGAAAGGCAAAAACGTGGACCTCATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 72 bp GCAAATGACAGCCGGGGCTTCTCGTTTAAGAATTCTTaGTCGAAATTGCTGCAGTCAAATGGTGATTTCACT +
Preference number: 6 (lower is better)
Translates to: ANDSRGFSFKNS*SKLLQSNGDFT
Trigger: AGTGAAATCACCATTTGACTGCAGCAATTTCGACAAAGAATTCTTAAACGAGAAGCCCCGGCTGTCATTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 72 bp TCATGTCCTTTGTGTCACTCATTTCCAGAAAGTATCTaGCATTCATTAGCATTCGGCCTTGAGGTTTCAGCT +
Preference number: 6 (lower is better)
Translates to: SCPLCHSFPESI*HSLAFGLEVSA
Trigger: AGCTGAAACCTCAAGGCCGAATGCTAATGAATGCAAGATACTTTCTGGAAATGAGTGACACAAAGGACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000610727.1
CDS GCA 72 bp CTTTGCTATAACTTTATCAATACACTTCTTGTGAATTaGTGCATTGCATTGTCGGCACTGGTAGCCCTGTTT +
Preference number: 6 (lower is better)
Translates to: LCYNFINTLLVN*CIALSALVALF
Trigger: AAACAGGGCTACCAGTGCCGACAATGCAATGCAGCAATTCACAAGAAGTGTATTGATAAAGTTATAGCAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 72 bp TTGAATCTCTCCTTGTGGAACATGGTTTCTCGGCTATaGATAGCTGATCCTGTGCACTTTGCTATAACTTTA +
Preference number: 6 (lower is better)
Translates to: LNLSLWNMVSRL*IADPVHFAITL
Trigger: TAAAGTTATAGCAAAGTGCACAGGATCAGCTATCAATAGCCGAGAAACCATGTTCCACAAGGAGAGATTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1
CDS CAA 72 bp TCAATTTTTAGTTTAATCTGCAGAGATGGTCTTTCTTaGTTCAGTTCAGGTTCTGGAAGATGGCACATTTTA +
Preference number: 6 (lower is better)
Translates to: SIFSLICRDGLS*FSSGSGRWHIL
Trigger: TAAAATGTGCCATCTTCCAGAACCTGAACTGAACAAAGAAAGACCATCTCTGCAGATTAAACTAAAAATTGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263125.10
ENST00000397176.6
ENST00000539722.5
ENST00000610727.1