RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKCG (Homo sapiens)

Ensembl gene IDs: ENSG00000126583

Ensembl transcript IDs: ENST00000263431.4, ENST00000419486.1, ENST00000474397.5, ENST00000479081.5, ENST00000682028.1, ENST00000682268.1, ENST00000682676.1, ENST00000682902.1, ENST00000683513.1

Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGAGGAGAGTCCCAGAGAGTGGCAGGCACTGGGGAGAGTTGGGGTaGGTCCGAGCCAGACAGGAGCCATGCACGGCAGGCGGGCTGCGG +
Preference number: 1 (lower is better)
Translates to: RRRVPESGRHWGELG*VRARQEPCTAGGLR
Trigger: CCGCAGCCCGCCTGCCGTGCATGGCTCCTGTCTGGCTCGGACCCACCCCAACTCTCCCCAGTGCCTGCCACTCTCTGGGACTCTCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 90 bp GGGCTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATaGAGTTCAGAAGGCCAGGAACGCTTGGGAGGGGCGTCTAGAACC +
Preference number: 1 (lower is better)
Translates to: GLRSSLERGTAVEAV*SSEGQERLGGASRT
Trigger: GGTTCTAGACGCCCCTCCCAAGCGTTCCTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGAGCGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 90 bp CCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTaGGGCAGAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTC +
Preference number: 1 (lower is better)
Translates to: PMELGMVSGVVSGPD*GRVQNAKVRENIGL
Trigger: GAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 90 bp GGGAGGCACAGAACTACCAAGATGGAGTCTCGAACCCCATGGAGTTaGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAG +
Preference number: 1 (lower is better)
Translates to: GRHRTTKMESRTPWS*GWLVVWSLDPIGAE
Trigger: CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGTTCTGTGCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 90 bp TCAGCATCAGCATCCCAAATTTATTCTCCAGCAGCTGTGGCCGGGTaGGAGAGGCTAAGGGAAGAGGAGGGGAGGAGGAGAGTCCCAGAG +
Preference number: 1 (lower is better)
Translates to: SASASQIYSPAAVAG*ERLREEEGRRRVPE
Trigger: CTCTGGGACTCTCCTCCTCCCCTCCTCTTCCCTTAGCCTCTCCCACCCGGCCACAGCTGCTGGAGAATAAATTTGGGATGCTGATGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CAA 90 bp GGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGGCCAGGAACGCTaGGGAGGGGCGTCTAGAACCCGCGGGGGCAGAGCTGGAATGCTG +
Preference number: 2 (lower is better)
Translates to: GTAVEAVWSSEGQER*GGASRTRGGRAGML
Trigger: CAGCATTCCAGCTCTGCCCCCGCGGGTTCTAGACGCCCCTCCCAAGCGTTCCTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR CCA 90 bp TCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGGCCAGCGGCGGAGGGGACGTTaGGGACACCTAGTGGCGGCG +
Preference number: 2 (lower is better)
Translates to: SSLERGTAVEAVWSSEGQRRRGR*GHLVAA
Trigger: CGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCG...CTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR TCA 90 bp CCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGGCTCCGCTCAAGTCTTaGACGCGGGACGGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: PWSWGWLVVWSLDPIGAEAPLKS*TRDGCR
Trigger: TCTACAGCCGTCCCGCGTTCAAGACTTGAGCGGAGC...CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR CCA 90 bp ACTACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGAAGTTGGGGGTGAAGTaGGGCTGCCGCCGGCACGGC +
Preference number: 2 (lower is better)
Translates to: TTKMESRTPWSWGWLVVWKLGVK*GCRRHG
Trigger: GCCGTGCCGGCGGCAGCCCCACTTCACCCCCAACTT...CCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR CCA 90 bp GAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACCCGCGGGGGCAGAGCTaGAATGCTGGGGTGCAGGAT +
Preference number: 2 (lower is better)
Translates to: ESRTLRSGRISGSAQVLNPRGQS*NAGVQD
Trigger: ATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG...GTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR CCA 90 bp CCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGGCAGAGCTGGAATGCTaGGGTGCAGGATCTAGAATG +
Preference number: 2 (lower is better)
Translates to: PWSWGWLVVWSLDPIGAEAELEC*GAGSRM
Trigger: CATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGC...CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR GCA 90 bp AAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGGGGCAGAGCTGGAATaGTGGGGTGCAGGATCTAGA +
Preference number: 2 (lower is better)
Translates to: KMESRTPWSWGWLVVWSLGAELE*WGAGSR
Trigger: TCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCC...CAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR CCA 90 bp CCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGGCTGTAGAGGCTGTATaGAGTTCAGAAGGCCAGGAA +
Preference number: 2 (lower is better)
Translates to: PWSWGWLVVWSLDPIGAEAVEAV*SSEGQE
Trigger: TTCCTGGCCTTCTGAACTCCATACAGCCTCTACAGC...CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR CAA 90 bp ATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTACGGCGGAGGGGACGTaGGGGACACCTAGTGGCGGC +
Preference number: 3 (lower is better)
Translates to: MHGRRAAGRSDGFGMGKSTAEGT*GTPSGG
Trigger: GCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCGT...AGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 72 bp GTCCCAGAGAGTGGCAGGCACTGGGGAGAGTTGGGGTaGGTCCGAGCCAGACAGGAGCCATGCACGGCAGGC +
Preference number: 3 (lower is better)
Translates to: VPESGRHWGELG*VRARQEPCTAG
Trigger: GCCTGCCGTGCATGGCTCCTGTCTGGCTCGGACCCACCCCAACTCTCCCCAGTGCCTGCCACTCTCTGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR CAA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTGAAGGCCAGGAACGCTaGGGAGGGGCGTCTAGAACC +
Preference number: 3 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSEGQER*GGASRT
Trigger: GGTTCTAGACGCCCCTCCCAAGCGTTCCTGGCCTTC...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR-3UTR CAA 90 bp ATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTTCGAACCCCATGGAGTaGGGGATGGTTAGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: MHGRRAAGRSDGFGMGKSSNPME*GMVSGV
Trigger: CACACCACTAACCATCCCCAACTCCATGGGGTTCGA...AGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 72 bp TCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATaGAGTTCAGAAGGCCAGGAACGCTTGGGAGGGGCG +
Preference number: 3 (lower is better)
Translates to: SSLERGTAVEAV*SSEGQERLGGA
Trigger: CGCCCCTCCCAAGCGTTCCTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 72 bp GCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATaGGGAAGTCTAGAACAAAAGCTGATTGGGAGCCTC +
Preference number: 3 (lower is better)
Translates to: AGGLRGEVMASG*GSLEQKLIGSL
Trigger: GAGGCTCCCAATCAGCTTTTGTTCTAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 72 bp TTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTaGGGCAGAGTCCAGAACGCTAAGGTCAGGGAGAAT +
Preference number: 3 (lower is better)
Translates to: LGMVSGVVSGPD*GRVQNAKVREN
Trigger: ATTCTCCCTGACCTTAGCGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 72 bp AGGCACAGAACTACCAAGATGGAGTCTCGAACCCCATaGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGAC +
Preference number: 3 (lower is better)
Translates to: RHRTTKMESRTP*SWGWLVVWSLD
Trigger: GTCCAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGTTCTGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CCA 72 bp AGAACTACCAAGATGGAGTCTCGAACCCCATGGAGTTaGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATT +
Preference number: 3 (lower is better)
Translates to: RTTKMESRTPWS*GWLVVWSLDPI
Trigger: AATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTGCCGCCGGCACGGCGGAGGGGACGTTGGGGACACCTAGTGGCGGCGGGTGAGAGCTGGGTGAGGAAGTaGGGCCGGCCGCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: LPPARRRGRWGHLVAAGESWVRK*GRPPGP
Trigger: GGGTCCTGGCGGCCGGCCCCACTTCCTCACCCAGCT...CTCACCCGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCGTGCCGGCGGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CTGCCGCCGGCACGGCGGAGGGGACGTTGGGGACACCTAGTGGCGGCGGGTGAGAATCGGCCTGGTCGATaGTGGCCAGGACTAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LPPARRRGRWGHLVAAGENRPGR*WPGLGG
Trigger: ACCGCCTAGTCCTGGCCAGCATCGACCAGGCCGATT...CTCACCCGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCGTGCCGGCGGCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TGGGGAGAGTTGGGGTGGGTCCGAGCCAGACAGGAGCCATGCACGGCAGGCGGGTGGAGGGGTCAGCGCTaGCGCCGCCCGCGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: WGELGWVRARQEPCTAGGWRGQR*RRPREE
Trigger: TTCTTCACGCGGGCGGCGCCAGCGCTGACCCCTCCA...CCCGCCTGCCGTGCATGGCTCCTGTCTGGCTCGGACCCACCCCAACTCTCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCCCACACCTCCACGCTaGGCCGGCGCTCCACATCCC +
Preference number: 4 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSPTPPR*AGAPHP
Trigger: GGGATGTGGAGCGCCGGCTCAGCGTGGAGGTGTGGG...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGCAAGGCACCTCCAGGTaGGGAGCGCGCCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGQGTSR*GARQAG
Trigger: CCCTGCCTGGCGCGCTCCGCACCTGGAGGTGCCTTG...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp AGTTCAGAAGGCCAGGAACGCTTGGGAGGGGCGTCTAGAACCCGCGGGGGCAGACGGGGGTCGTCCGTCTaGGGGCCCTTCCCAGCGCCT +
Preference number: 4 (lower is better)
Translates to: SSEGQERLGGASRTRGGRRGSSV*GPFPAP
Trigger: AGGCGCTGGGAAGGGCCCCCAGACGGACGACCCCCG...TCTGCCCCCGCGGGTTCTAGACGCCCCTCCCAAGCGTTCCTGGCCTTCTGAACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp GCCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGCACACGGGCGGGGTCTaGAAGGAGGCGGGATCTCCA +
Preference number: 4 (lower is better)
Translates to: AMHGRRAAGRSDGFGMGKHTGGV*KEAGSP
Trigger: TGGAGATCCCGCCTCCTTTCAGACCCCGCCCGTGTG...CTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CTGCCGCCGGCACGGCGGAGGGGACGTTGGGGACACCTAGTGGCGGCGGGTGAGGTTTCTCCACCAGCGTaGAGTCCACATCGTCGTCCT +
Preference number: 4 (lower is better)
Translates to: LPPARRRGRWGHLVAAGEVSPPA*SPHRRP
Trigger: AGGACGACGATGTGGACTGCACGCTGGTGGAGAAAC...CTCACCCGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCGTGCCGGCGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGCAAAGTTCTCGCCGCTaGGGCCACACGGGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGQSSRR*GHTGGV
Trigger: GACCCCGCCCGTGTGGCCGCAGCGGCGAGAACTTTG...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp ATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTCCGCGGCGCTCGGTGTaGTCCACACCGCACAGGGAG +
Preference number: 4 (lower is better)
Translates to: MHGRRAAGRSDGFGMGKSPRRSV*STPHRE
Trigger: CTCCCTGTGCGGTGTGGACCACACCGAGCGCCGCGG...AGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TGGGGAGAGTTGGGGTGGGTCCGAGCCAGACAGGAGCCATGCACGGCAGGCGGGAAGGTGGAGTGGAGCTaGGTGAGGAAGTGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: WGELGWVRARQEPCTAGGKVEWS*VRKWGR
Trigger: CCGGCCCCACTTCCTCACCCAGCTCCACTCCACCTT...CCCGCCTGCCGTGCATGGCTCCTGTCTGGCTCGGACCCACCCCAACTCTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTAAGTTGGGGGTGAAGTaGGGCTGCCGCCGGCACGGC +
Preference number: 4 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSKLGVK*GCRRHG
Trigger: GCCGTGCCGGCGGCAGCCCCACTTCACCCCCAACTT...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp CTGCCGCCGGCACGGCGGAGGGGACGTTGGGGACACCTAGTGGCGGCGGGTGAGTCGTGGCATCGTCGATaGACCACAAAGCTGCAGACT +
Preference number: 4 (lower is better)
Translates to: LPPARRRGRWGHLVAAGESWHRR*TTKLQT
Trigger: AGTCTGCAGCTTTGTGGTTCATCGACGATGCCACGA...CTCACCCGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCGTGCCGGCGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp GCCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGCCTAGTGGCGGCGGGTaGGATTACATGACGGGCACA +
Preference number: 4 (lower is better)
Translates to: AMHGRRAAGRSDGFGMGKPSGGG*DYMTGT
Trigger: TGTGCCCGTCATGTAATCTCACCCGCCGCCACTAGG...CTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp TGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTACTGCGGGCATCCGGGTaGACGAAGTCGGGGTTCACG +
Preference number: 4 (lower is better)
Translates to: CTAGGLRGEVMASGWGSLLRASG*TKSGFT
Trigger: CGTGAACCCCGACTTCGTGCACCCGGATGCCCGCAG...TAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTGCCGCCGGCACGGCGGAGGGGACGTTGGGGACACCTAGTGGCGGCGGGTGAGTCCACATCGTCGTCCTaGACGATCACGTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LPPARRRGRWGHLVAAGESTSSS*TITSFF
Trigger: GAAAAAGGACGTGATCGTCCAGGACGACGATGTGGA...CTCACCCGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCGTGCCGGCGGCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTACGGCCTGGTCGATGCTaGCCAGGACTAGGCGGTCTG +
Preference number: 4 (lower is better)
Translates to: CTAGGLRGEVMASGWGSLRPGRC*PGLGGL
Trigger: CAGACCGCCTAGTCCTGGCCAGCATCGACCAGGCCG...TAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGCTGAAGTCGGAGATGTaGAGGCGTCCTGGACTCGCC +
Preference number: 4 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGLKSEM*RRPGLA
Trigger: GGCGAGTCCAGGACGCCTGCACATCTCCGACTTCAG...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGGCCAGACAGGAGCCATaGACGGCAGGCGGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PWSWGWLVVWSLDPIGAEARQEP*TAGGLR
Trigger: CCGCAGCCCGCCTGCCGTGCATGGCTCCTGTCTGGC...CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTGGCGCCGCCCGCGTaGAGAACTTGTCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSLAPPA*RTCQSS
Trigger: AGAACTTTGACAAGTTCTTCACGCGGGCGGCGCCAG...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp ATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGGCGCTTCCCTGGGTaGTTGGTCAGGAACCCCTTG +
Preference number: 4 (lower is better)
Translates to: MHGRRAAGRSDGFGMGKSRRFPG*LVRNPL
Trigger: CAAGGGGTTCCTGACCAAGCACCCAGGGAAGCGCCT...AGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTGGGGCAGAGCTGGAATaGTGGGGTGCAGGATCTAGA +
Preference number: 4 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSGAELE*WGAGSR
Trigger: TCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCC...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTAAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACGCGGGACGGCTGGGGGGAGCGGGCGAGTaGGGAGGAAGAGCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: LRSGRISGSAQVLNAGRLGGAGE*GGRAKG
Trigger: GCCTTTGGCTCTTCCTCCCCACTCGCCCGCTCCCCC...CAGCCGTCCCGCGTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTTAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp GCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGAACAAAGGACATGGCCCCCATaGAGTCGTTGCGGGAGGTCC +
Preference number: 4 (lower is better)
Translates to: AGGLRGEVMASGWGSLEQRTWPP*SRCGRS
Trigger: GGACCTCCCGCAACGACTTCATGGGGGCCATGTCCT...TTGTTCTAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp GGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGTCCAGAACGCTCATCCACGGGCGCCTTaGGCAGCTCCGAGACGCCAA +
Preference number: 4 (lower is better)
Translates to: GMVSGVVSGPDWGRVQNAHPRAP*AAPRRQ
Trigger: TTGGCGTCTCGGAGCTGCTCAAGGCGCCCGTGGATG...AGCGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGCAGGGACCAGGATCCTaGCTTTCTTGGGGGAAACAG +
Preference number: 4 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGQGPGS*LSWGKQ
Trigger: CTGTTTCCCCCAAGAAAGGCAGGATCCTGGTCCCTG...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GCCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGACACAGGGTTTAGCGTaGCTTTCACCGTTCGGGTCT +
Preference number: 4 (lower is better)
Translates to: AMHGRRAAGRSDGFGMGKTQGLA*LSPFGS
Trigger: AGACCCGAACGGTGAAAGCCACGCTAAACCCTGTGT...CTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGTCCAGAACGAGGCGGTCCGGGGTCTaGAAGGTGGAGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: WGWLVVWSLDPIGAESRTRRSGV*KVEWSW
Trigger: CCAGCTCCACTCCACCTTCCAGACCCCGGACCGCCT...CGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GACCCGATTGGGGCAGAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTCCGCCCAGGCGCTTCCCTaGGTGCTTGGTCAGGAACCC +
Preference number: 4 (lower is better)
Translates to: DPIGAESRTLRSGRISGSAQALP*VLGQEP
Trigger: GGGTTCCTGACCAAGCACCCAGGGAAGCGCCTGGGC...GGAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTCTGCCCCAATCGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGGCCAGCAGGCACTGGGCTGGTaGGGCTGCGGGCATCCGGGT +
Preference number: 4 (lower is better)
Translates to: SSLERGTAVEAVWSSEGQQALGW*GCGHPG
Trigger: ACCCGGATGCCCGCAGCCCCACCAGCCCAGTGCCTG...CTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGAACAATGGGGAGAGTTGGGGTaGGTCCGAGCCAGACAGGAG +
Preference number: 4 (lower is better)
Translates to: AGGLRGEVMASGWGSLEQWGELG*VRARQE
Trigger: CTCCTGTCTGGCTCGGACCCACCCCAACTCTCCCCA...TTGTTCTAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CAA 72 bp GTAGAGGCTGTATGGAGTTCAGAAGGCCAGGAACGCTaGGGAGGGGCGTCTAGAACCCGCGGGGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VEAVWSSEGQER*GGASRTRGGRA
Trigger: AGCTCTGCCCCCGCGGGTTCTAGACGCCCCTCCCAAGCGTTCCTGGCCTTCTGAACTCCATACAGCCTCTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp CTAGAACCCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGAGCTCCGCTCAAGTCTTaGACGCGGGACGGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: LEPAGAELECWGAGSRMGAPLKS*TRDGCR
Trigger: TCTACAGCCGTCCCGCGTTCAAGACTTGAGCGGAGC...TCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGGGTTCTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTGGAAGGGAGAGGAGCTaGAGACTCGAAGGATCAAAG +
Preference number: 4 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSGRERS*RLEGSK
Trigger: CTTTGATCCTTCGAGTCTCCAGCTCCTCTCCCTTCC...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAAGTGGTCGCAGAAGGTaGGGCTGCTGTAGCTATGCA +
Preference number: 4 (lower is better)
Translates to: CTAGGLRGEVMASGWGSLSGRRR*GCCSYA
Trigger: TGCATAGCTACAGCAGCCCCACCTTCTGCGACCACT...TAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp ACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTGCACAGGCACTGGGCTaGTGGGGCTGCGGGCATCCG +
Preference number: 4 (lower is better)
Translates to: TKMESRTPWSWGWLVVWSAQALG*WGCGHP
Trigger: CGGATGCCCGCAGCCCCACCAGCCCAGTGCCTGTGC...AGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp AGAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGTTCCCCATCAGGCCCTaGGCCCAGGCGCTTCCCTGG +
Preference number: 4 (lower is better)
Translates to: RILHISQKSPEHSSGTYWFPIRP*AQALPW
Trigger: CCAGGGAAGCGCCTGGGCTCAGGGCCTGATGGGGAA...CCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp TGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGTCCAGAACGCGGGGTTCACGTAGGTaGAGCCCTGGAAATCGGCCT +
Preference number: 4 (lower is better)
Translates to: WGWLVVWSLDPIGAESRTRGSRR*SPGNRP
Trigger: AGGCCGATTTCCAGGGCTTCACCTACGTGAACCCCG...CGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CTGGGGAAAGAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGAGGGTCCCGCAGAAGGTaGGGGTTGTCGTCCCGGGGA +
Preference number: 4 (lower is better)
Translates to: LGKESSIYPRNPQSTAAGGSRRR*GLSSRG
Trigger: TCCCCGGGACGACAACCCGCACCTTCTGCGGGACCC...TCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTCTTTCCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGAGGGAAATTCCGAGGTaGGCAGGAGAGGGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: PWSWGWLVVWSLDPIGAEREIPR*AGEGQG
Trigger: GCCTTGCCCCTCTCCTGCCCACCTCGGAATTTCCCT...CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCAAGCCTCAAACTTCTaGAGGAGGCTGCAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSQASNF*RRLQLS
Trigger: TGACAACTGCAGCCTCCTCCAGAAGTTTGAGGCTTG...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGTCCAGAACGGATGTGCAGGCGTCCTaGACTCGCCCCGAAGAAGCA +
Preference number: 4 (lower is better)
Translates to: WGWLVVWSLDPIGAESRTDVQAS*TRPEEA
Trigger: TGCTTCTTCGGGGCGAGTCCAGGACGCCTGCACATC...CGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGAACAACATCTAGAACTAGAGTaGAGGCGGGGAGCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: AGGLRGEVMASGWGSLEQHLELE*RRGASE
Trigger: CTCCGAGGCTCCCCGCCTCCACTCTAGTTCTAGATG...TTGTTCTAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGGCCAGGGCACTGGGGAGAGTTaGGGTGGGTCCGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SSLERGTAVEAVWSSEGQGTGES*GGSEPD
Trigger: GTCTGGCTCGGACCCACCCCAACTCTCCCCAGTGCC...CTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp AAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGCAGCTGTGGCCGGGTaGGAGAGGCTAAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: KVRENIGLRSSLERGTAVAAVAG*ERLREE
Trigger: CTCTTCCCTTAGCCTCTCCCACCCGGCCACAGCTGC...TACAGCCGTCCCGCGTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp GGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGTCCAGAACGCTTTCCGATACCCCAGATaGAGTCGGTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: GMVSGVVSGPDWGRVQNAFRYPR*SRCSGC
Trigger: GCAGCCACTGCACCGACTTCATCTGGGGTATCGGAA...AGCGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp CTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGCGGGTGAGATTACATaGCGGGCACAGGCACTGGGC +
Preference number: 4 (lower is better)
Translates to: LRSSLERGTAVEAVWSSEAGEIT*RAQALG
Trigger: GCCCAGTGCCTGTGCCCGTCATGTAATCTCACCCGC...TTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGAGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGGATGAACCACAAAGCTaGAGACTTGACATTGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGDEPQS*RLDIAG
Trigger: GCCTGCAATGTCAAGTCTGCAGCTTTGTGGTTCATC...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp GGCAGAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTCGCACACAGCGCCGGTaGACGTTCATCTCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRVQNAKVRENIGLRSSLRTQRR*TFISQQ
Trigger: CTGCTGCGAGATGAACGTGCACCGGCGCTGTGTGCG...AAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp TCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGGCCAGGCTCATCAGAGCCCCTaGGCTCGGCCAGCATCACCT +
Preference number: 4 (lower is better)
Translates to: SSLERGTAVEAVWSSEGQAHQSP*ARPASP
Trigger: AGGTGATGCTGGCCGAGCGCAGGGGCTCTGATGAGC...CTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGACCGCGGGGGCAGAGCTaGAATGCTGGGGTGCAGGAT +
Preference number: 4 (lower is better)
Translates to: ESSIYPRNPQSTAAGRTGPRGQS*NAGVQD
Trigger: ATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG...TCCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGCTGATTGGGAGCCTCTaGGGAAAGAATCCTCCATAT +
Preference number: 4 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGLIGSL*GKNPPY
Trigger: ATATGGAGGATTCTTTCCCCAGAGGCTCCCAATCAG...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp AGAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGGGCTGCGGGGAGAAGTaGTGGCTTCGGGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: RILHISQKSPEHSSGTYWGCGEK*WLRDGE
Trigger: TTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCC...CCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp GGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGTCCAGAACGCTTACGTGGATCTCATCTaGTGTGGGAGCCCGGATCTC +
Preference number: 4 (lower is better)
Translates to: GMVSGVVSGPDWGRVQNAYVDLI*CGSPDL
Trigger: GAGATCCGGGCTCCCACAGCAGATGAGATCCACGTA...AGCGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGACTTCTGGAGGAGGCTaGAGTTGTCAGCATCGGCCA +
Preference number: 4 (lower is better)
Translates to: PWSWGWLVVWSLDPIGAETSGGG*SCQHRP
Trigger: TGGCCGATGCTGACAACTGCAGCCTCCTCCAGAAGT...CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp CCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGGCCGATAGCGATTTCTaGCGCGTAGAACGCTGCATG +
Preference number: 4 (lower is better)
Translates to: PWSWGWLVVWSLDPIGAEADSDF*RVERCM
Trigger: CATGCAGCGTTCTACGCGGCAGAAATCGCTATCGGC...CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAACCCTGGAAATCGGCCTaGTCGATGCTGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: LRSSLERGTAVEAVWSSEPWKSA*SMLART
Trigger: AGTCCTGGCCAGCATCGACCAGGCCGATTTCCAGGG...TTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGAGCGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGAACAAGCAGAGCTGGAATGCTaGGGTGCAGGATCTAGAATG +
Preference number: 4 (lower is better)
Translates to: AGGLRGEVMASGWGSLEQAELEC*GAGSRM
Trigger: CATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGC...TTGTTCTAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGGCCAGAAGGCCAGGAACGCTTaGGAGGGGCGTCTAGAACCC +
Preference number: 4 (lower is better)
Translates to: SSLERGTAVEAVWSSEGQKARNA*EGRLEP
Trigger: GGGTTCTAGACGCCCCTCCCAAGCGTTCCTGGCCTT...CTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTAAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACGCGGGACGGCTGGGATGGTTAGTGGTGTaGTCTCTGGACCCGATTGGG +
Preference number: 4 (lower is better)
Translates to: LRSGRISGSAQVLNAGRLGWLVV*SLDPIG
Trigger: CCCAATCGGGTCCAGAGACCACACCACTAACCATCC...CAGCCGTCCCGCGTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp AAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGTCGTGGACCACCTTCTaGCTCAGGGCCCCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KMESRTPWSWGWLVVWSLSWTTF*LRAPFL
Trigger: CAGAAAGGGGGCCCTGAGGCAGAAGGTGGTCCACGA...CAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp AAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGCGCAGAAGGTGGGGCTaGTGTAGCTATGCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: KMESRTPWSWGWLVVWSLRRRWG*CSYAGG
Trigger: TCCGCCTGCATAGCTACAGCAGCCCCACCTTCTGCG...CAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp AGAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGTGGTCAGGAACCCCTTaGAGATGGCCACGGCTTCCC +
Preference number: 4 (lower is better)
Translates to: RILHISQKSPEHSSGTYWWSGTP*RWPRLP
Trigger: GGGAAGCCGTGGCCATCTGCAAGGGGTTCCTGACCA...CCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp AAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACGCGGGACGGCTGTATGGCTCTTGACTTCGTaGACCACCTTCTGCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KVRENIGLRSSLERGTAVWLLTS*TTFCLR
Trigger: CCTGAGGCAGAAGGTGGTCCACGAAGTCAAGAGCCA...TACAGCCGTCCCGCGTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGGCCAGGGATCTCATCTGCTGTaGGAGCCCGGATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSLERGTAVEAVWSSEGQGSHLL*EPGSPA
Trigger: AGCTGGAGATCCGGGCTCCCACAGCAGATGAGATCC...CTGGCCTTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGAGGAACCCCTTGCAGATaGCCACGGCTTCCCGGGAAA +
Preference number: 4 (lower is better)
Translates to: ESSIYPRNPQSTAAGRTGGTPCR*PRLPGK
Trigger: TTTCCCGGGAAGCCGTGGCCATCTGCAAGGGGTTCC...TCCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTAGAACAAAAGCTGATTGGGAGCCTCTGGGGAAAGAATCCTCCATATATCCCACGGCGGAGGGGACGTTaGGGACACCTAGTGGCGGCG +
Preference number: 4 (lower is better)
Translates to: LEQKLIGSLWGKNPPYIPRRRGR*GHLVAA
Trigger: CGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCG...TGGGATATATGGAGGATTCTTTCCCCAGAGGCTCCCAATCAGCTTTTGTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAAGTCTCTGGACCCGATTaGGGCAGAGTCCAGAACGCT +
Preference number: 4 (lower is better)
Translates to: LRSSLERGTAVEAVWSSEVSGPD*GRVQNA
Trigger: AGCGTTCTGGACTCTGCCCCAATCGGGTCCAGAGAC...TTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGAGCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp TGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGTCCAGAACGCCATGGAGTTGGGGATaGTTAGTGGTGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: WGWLVVWSLDPIGAESRTPWSWG*LVVWSL
Trigger: CAGAGACCACACCACTAACCATCCCCAACTCCATGG...CGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp ACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTGCCCTTCCCAGCGCCTaGACACTCGAAGGTCACAAA +
Preference number: 4 (lower is better)
Translates to: TKMESRTPWSWGWLVVWSALPSA*TLEGHK
Trigger: TTTGTGACCTTCGAGTGTCCAGGCGCTGGGAAGGGC...AGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp AAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGCGCTCCACATCCCCTaGCTTCAGGTTGAACACAAA +
Preference number: 4 (lower is better)
Translates to: KVRENIGLRSSLERGTAVALHIP*LQVEHK
Trigger: TTTGTGTTCAACCTGAAGCCAGGGGATGTGGAGCGC...TACAGCCGTCCCGCGTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GACCCGATTGGGGCAGAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTCCGCTGTAGAGGCTGTATaGAGTTCAGAAGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: DPIGAESRTLRSGRISGSAVEAV*SSEGQE
Trigger: TTCCTGGCCTTCTGAACTCCATACAGCCTCTACAGC...GGAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTCTGCCCCAATCGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAACGAACCCCATGGAGTTaGGGATGGTTAGTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LRSSLERGTAVEAVWSSERTPWS*GWLVVW
Trigger: CCACACCACTAACCATCCCCAACTCCATGGGGTTCG...TTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGAGCGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp AAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGAGTCTCGAACCCCATaGAGTTGGGGATGGTTAGTG +
Preference number: 4 (lower is better)
Translates to: KVRENIGLRSSLERGTAVESRTP*SWGWLV
Trigger: CACTAACCATCCCCAACTCCATGGGGTTCGAGACTC...TACAGCCGTCCCGCGTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp ACTACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGGAGAGTCCCAGAGAGTaGCAGGCACTGGGGAGAGTT +
Preference number: 4 (lower is better)
Translates to: TTKMESRTPWSWGWLVVWESPRE*QALGRV
Trigger: AACTCTCCCCAGTGCCTGCCACTCTCTGGGACTCTC...CCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp CTCCGCTCAAGTCTTGAACGCGGGACGGCTGTAGAGGCTGTATGGAGTTCAGAACCCCTGGCTTCAGGTTaGACACAAAGGTCTCATTCC +
Preference number: 4 (lower is better)
Translates to: LRSSLERGTAVEAVWSSEPLASG*TQRSHS
Trigger: GGAATGAGACCTTTGTGTTCAACCTGAAGCCAGGGG...TTCTGAACTCCATACAGCCTCTACAGCCGTCCCGCGTTCAAGACTTGAGCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp CCCGATTGGGGCAGAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTCCGCCCTTTTTCAAGATCTTaGTGGCGTAGAGCTCATCAG +
Preference number: 4 (lower is better)
Translates to: PDWGRVQNAKVRENIGLRPFSRS*WRRAHQ
Trigger: CTGATGAGCTCTACGCCATCAAGATCTTGAAAAAGG...GCGGAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTCTGCCCCAATCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp GCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGAACAAAACTTGCCCAGCTGTTaGATGTGGTACATCAAGTCT +
Preference number: 4 (lower is better)
Translates to: AGGLRGEVMASGWGSLEQNLPSC*MWYIKS
Trigger: AGACTTGATGTACCACATTCAACAGCTGGGCAAGTT...TTGTTCTAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp AATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGAGTGTTCCATGATGGCCTaGAACAGCTCCTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: NPPYIPEIPRAQQRDVLECSMMA*NSSSSS
Trigger: GGACGAGGAGGAGCTGTTTCAGGCCATCATGGAACA...CTCCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp ACTACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGGCGGAAAAAGCCATGTaGACGGATGGTAGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: TTKMESRTPWSWGWLVVWAEKAM*TDGRFP
Trigger: GGGGAACCTACCATCCGTGCACATGGCTTTTTCCGC...CCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp AGAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGCGAGCGGTGAACTTGTaGCTCTTGACTTCGTGGACC +
Preference number: 4 (lower is better)
Translates to: RILHISQKSPEHSSGTYWRAVNL*LLTSWT
Trigger: GGTCCACGAAGTCAAGAGCCACAAGTTCACCGCTCG...CCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp AAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACGCGGGACGGCTGTATCGCCAACAGTTACGTaGATCTCATCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: KVRENIGLRSSLERGTAVSPTVT*ISSAVG
Trigger: TCCCACAGCAGATGAGATCCACGTAACTGTTGGCGA...TACAGCCGTCCCGCGTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263431.4
3UTR CAA 72 bp CAGAACTACCAAGATGGAGTCTCGAACCCCATGGAGTaGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGAT +
Preference number: 4 (lower is better)
Translates to: QNYQDGVSNPME*GMVSGVVSGPD
Trigger: ATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp GAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGATCCGAGGGTCTGGGATaGGCTTCAGTTTCACATAGG +
Preference number: 4 (lower is better)
Translates to: ESSIYPRNPQSTAAGRTGSEGLG*ASVSHR
Trigger: CCTATGTGAAACTGAAGCTCATCCCAGACCCTCGGA...TCCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR GCA 90 bp ACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTTGCCGCGTAGAACGCTaGATGGGGCTCCTTAAACTT +
Preference number: 4 (lower is better)
Translates to: TKMESRTPWSWGWLVVWSCRVER*MGLLKL
Trigger: AAGTTTAAGGAGCCCCATGCAGCGTTCTACGCGGCA...AGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR TCA 90 bp CTGGGGAAAGAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGATCAGGTCCCTGTAGATaGTGCCCTGATTGTGAAGGA +
Preference number: 4 (lower is better)
Translates to: LGKESSIYPRNPQSTAAGSGPCR*CPDCEG
Trigger: TCCTTCACAATCAGGGCATCATCTACAGGGACCTGA...TCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTCTTTCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp ACTACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTACTCGCCCTCCTCCTaGTTCAGTAACTTGTACCAG +
Preference number: 4 (lower is better)
Translates to: TTKMESRTPWSWGWLVVWYSPSS*FSNLYQ
Trigger: CTGGTACAAGTTACTGAACCAGGAGGAGGGCGAGTA...CCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GGCAGAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGTGATGGCTTCGGGATaGGGAAGTCTAGAACAAAAG +
Preference number: 4 (lower is better)
Translates to: GRVQNAKVRENIGLRSSLVMASG*GSLEQK
Trigger: CTTTTGTTCTAGACTTCCCCATCCCGAAGCCATCAC...AAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTCCGCTCAAGTCTTGAACACAGAACTACCAAGATaGAGTCTCGAACCCCATGGA +
Preference number: 4 (lower is better)
Translates to: ESRTLRSGRISGSAQVLNTELPR*SLEPHG
Trigger: TCCATGGGGTTCGAGACTCCATCTTGGTAGTTCTGT...GTTCAAGACTTGAGCGGAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp GAATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGAAGAACAAAAGCTGATTaGGAGCCTCTGGGGAAAGAA +
Preference number: 4 (lower is better)
Translates to: ESSIYPRNPQSTAAGRTGRTKAD*EPLGKE
Trigger: TTCTTTCCCCAGAGGCTCCCAATCAGCTTTTGTTCT...TCCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CCA 90 bp CTAGAACAAAAGCTGATTGGGAGCCTCTGGGGAAAGAATCCTCCATATATCCCACAGGTTCCGAGGGTCTaGGATGAGCTTCAGTTTCAC +
Preference number: 4 (lower is better)
Translates to: LEQKLIGSLWGKNPPYIPQVPRV*DELQFH
Trigger: GTGAAACTGAAGCTCATCCCAGACCCTCGGAACCTG...TGGGATATATGGAGGATTCTTTCCCCAGAGGCTCCCAATCAGCTTTTGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp CTGCCGCCGGCACGGCGGAGGGGACGTTGGGGACACCTAGTGGCGGCGGGTGAGGCCCCCATGAAGTCGTaGCGGGAGGTCCGGTCCCAG +
Preference number: 5 (lower is better)
Translates to: LPPARRRGRWGHLVAAGEAPMKS*REVRSQ
Trigger: CTGGGACCGGACCTCCCGCAACGACTTCATGGGGGC...CTCACCCGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCGTGCCGGCGGCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS TCA 90 bp CCAGGACTAGGCGGTCTGGAGGGGTCAGCGCTGGCGCCGCCCGCGTaGAGAACTTGTCAAAGTTCTCGCCGCTGCGGCCACACGGGCGGG +
Preference number: 5 (lower is better)
Translates to: PGLGGLEGSALAPPA*RTCQSSRRCGHTGG
Trigger: CCCGCCCGTGTGGCCGCAGCGGCGAGAACTTTGACAAGTTCTTCACGCGGGCGGCGCCAGCGCTGACCCCTCCAGACCGCCTAGTCCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682676.1
ENST00000683513.1
CDS-3UTR CAA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCGCAGAAGGTGCGGGTaGTCGTCCCGGGGAAGACGT +
Preference number: 5 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSRRRCG*SSRGRR
Trigger: ACGTCTTCCCCGGGACGACAACCCGCACCTTCTGCG...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS TCA 90 bp TGGGGCTGCGGGCATCCGGGTGCACGAAGTCGGGGTTCACGTAGGTaGAGCCCTGGAAATCGGCCTGGTCGATGCTGGCCAGGACTAGGC +
Preference number: 5 (lower is better)
Translates to: WGCGHPGARSRGSRR*SPGNRPGRCWPGLG
Trigger: GCCTAGTCCTGGCCAGCATCGACCAGGCCGATTTCCAGGGCTTCACCTACGTGAACCCCGACTTCGTGCACCCGGATGCCCGCAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682676.1
ENST00000683513.1
CDS-3UTR CAA 90 bp GCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGAACAAACGGCGGAGGGGACGTaGGGGACACCTAGTGGCGGC +
Preference number: 5 (lower is better)
Translates to: AGGLRGEVMASGWGSLEQTAEGT*GTPSGG
Trigger: GCCGCCACTAGGTGTCCCCAACGTCCCCTCCGCCGT...TTGTTCTAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGGAAGGCCAGGAACGCTaGGGAGGGGCGTCTAGAACC +
Preference number: 5 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGEGQER*GGASRT
Trigger: GGTTCTAGACGCCCCTCCCAAGCGTTCCTGGCCTTC...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGGGTCTCTGGACCCGATaGGGGCAGAGTCCAGAACGC +
Preference number: 5 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGGLWTR*GQSPER
Trigger: GCGTTCTGGACTCTGCCCCAATCGGGTCCAGAGACC...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
66% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS CCA 90 bp GCTGGAGACTCGAAGGATCAAAGGAGCCACAGGGAAATTCCGAGGTaGGCAGGAGAGGGGCAAGGCACCTCCAGGTGCGGAGCGCGCCAG +
Preference number: 5 (lower is better)
Translates to: AGDSKDQRSHREIPR*AGEGQGTSRCGARQ
Trigger: CTGGCGCGCTCCGCACCTGGAGGTGCCTTGCCCCTCTCCTGCCCACCTCGGAATTTCCCTGTGGCTCCTTTGATCCTTCGAGTCTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS CCA 90 bp TTAGGTTACGGGCCTCGCCAACAGTTACGTGGATCTCATCTGCTGTaGGAGCCCGGATCTCCAGCTGCAGGCGCCCGCGGCGCTCGGTGT +
Preference number: 5 (lower is better)
Translates to: LGYGPRQQLRGSHLL*EPGSPAAGARGARC
Trigger: ACACCGAGCGCCGCGGGCGCCTGCAGCTGGAGATCCGGGCTCCCACAGCAGATGAGATCCACGTAACTGTTGGCGAGGCCCGTAACCTAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263431.4
ENST00000474397.5
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS-3UTR CAA 90 bp CCCGATTGGGGCAGAGTCCAGAACGCTAAGGTCAGGGAGAATATCGGGCTCCGCCCATCCACGGGCGCCTaGAGCAGCTCCGAGACGCCA +
Preference number: 5 (lower is better)
Translates to: PDWGRVQNAKVRENIGLRPSTGA*SSSETP
Trigger: TGGCGTCTCGGAGCTGCTCAAGGCGCCCGTGGATGG...GCGGAGCCCGATATTCTCCCTGACCTTAGCGTTCTGGACTCTGCCCCAATCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS TCA 90 bp CTCTCCCTAAATGTGGAGTCCACTGGCCTTCCAGCCACCTCCAGGTaGCCTAGGGCGAAGGATAGGCGGCGGGGATGGCCCCGAAACCGA +
Preference number: 5 (lower is better)
Translates to: LSLNVESTGLPATSR*PRAKDRRRGWPRNR
Trigger: TCGGTTTCGGGGCCATCCCCGCCGCCTATCCTTCGCCCTAGGTCACCTGGAGGTGGCTGGAAGGCCAGTGGACTCCACATTTAGGGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479081.5
CDS-3UTR CAA 90 bp TGGGGAGAGTTGGGGTGGGTCCGAGCCAGACAGGAGCCATGCACGGCAGGCGGGGTGAACTTGTGGCTCTaGACTTCGTGGACCACCTTC +
Preference number: 5 (lower is better)
Translates to: WGELGWVRARQEPCTAGGVNLWL*TSWTTF
Trigger: GAAGGTGGTCCACGAAGTCAAGAGCCACAAGTTCAC...CCCGCCTGCCGTGCATGGCTCCTGTCTGGCTCGGACCCACCCCAACTCTCCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp CCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTATGCAGGCGGAACTaGTGTTTGTTCCGGGGGTCG +
Preference number: 5 (lower is better)
Translates to: PCTAGGLRGEVMASGWGSLCRRN*CLFRGS
Trigger: CGACCCCCGGAACAAACACAAGTTCCGCCTGCATAG...ACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp GCCATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCCTGGTTCAGTAACTaGTACCAGCCATCCACGGGC +
Preference number: 5 (lower is better)
Translates to: AMHGRRAAGRSDGFGMGKSWFSN*YQPSTG
Trigger: GCCCGTGGATGGCTGGTACAAGTTACTGAACCAGGA...CTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCATGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS TCA 90 bp GCGGAAAAAGCCATGTGCACGGATGGTAGGTTCCCCATCAGGCCCTaGGCCCAGGCGCTTCCCTGGGTGCTTGGTCAGGAACTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: AEKAMCTDGRFPIRP*AQALPWVLGQELSC
Trigger: GCAGGACAGTTCCTGACCAAGCACCCAGGGAAGCGCCTGGGCTCAGGGCCTGATGGGGAACCTACCATCCGTGCACATGGCTTTTTCCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000683513.1
CDS-3UTR CAA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGGCTGCAGACTTGACATaGCAGGCCCTGCTTTCCGAT +
Preference number: 5 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGAADLT*QALLSD
Trigger: ATCGGAAAGCAGGGCCTGCAATGTCAAGTCTGCAGC...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp TGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGCCCGCGTGAAGAACTaGTCAAAGTTCTCGCCGCTG +
Preference number: 5 (lower is better)
Translates to: CTAGGLRGEVMASGWGSLARVKN*SKFSPL
Trigger: CAGCGGCGAGAACTTTGACAAGTTCTTCACGCGGGC...TAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp CCGCGGGGGCAGAGCTGGAATGCTGGGGTGCAGGATCTAGAATGGGACAGGGGGTCGAACCCCATGGAGTaGGGGATGGTTAGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: PRGQSWNAGVQDLEWDRGSNPME*GMVSGV
Trigger: CACACCACTAACCATCCCCAACTCCATGGGGTTCGA...CCCCCTGTCCCATTCTAGATCCTGCACCCCAGCATTCCAGCTCTGCCCCCGCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS CCA 90 bp GTGTTTGTTCCGGGGGTCGTCCGTCTGGGGGCCCTTCCCAGCGCCTaGACACTCGAAGGTCACAAATTCGTGGCATCGTCGATGAACCAC +
Preference number: 5 (lower is better)
Translates to: VFVPGVVRLGALPSA*TLEGHKFVASSMNH
Trigger: GTGGTTCATCGACGATGCCACGAATTTGTGACCTTCGAGTGTCCAGGCGCTGGGAAGGGCCCCCAGACGGACGACCCCCGGAACAAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000263431.4
ENST00000419486.1
ENST00000474397.5
ENST00000479081.5
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS-3UTR CAA 90 bp AAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGTGGAGGAGGCTGCAGTaGTCAGCATCGGCCACCGGC +
Preference number: 5 (lower is better)
Translates to: KMESRTPWSWGWLVVWSLWRRLQ*SASATG
Trigger: GCCGGTGGCCGATGCTGACAACTGCAGCCTCCTCCA...CAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp AAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGCCGAAGAAGCAGCGCTaGGGGTCGGTGGGACTAGGG +
Preference number: 5 (lower is better)
Translates to: KMESRTPWSWGWLVVWSLPKKQR*GSVGLG
Trigger: CCCTAGTCCCACCGACCCCAAGCGCTGCTTCTTCGG...CAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS CCA 90 bp GGGTTCGGGGCGGGTTTCCTGGGATTCCCAAAGCCGAAGGGAAGGTaGGGGAATCCGAGTCCTCTTGTAACCACTCTCCCTAAATGTGGA +
Preference number: 5 (lower is better)
Translates to: GFGAGFLGFPKPKGR*GNPSPLVTTLPKCG
Trigger: TCCACATTTAGGGAGAGTGGTTACAAGAGGACTCGGATTCCCCCACCTTCCCTTCGGCTTTGGGAATCCCAGGAAACCCGCCCCGAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479081.5
CDS-3UTR CAA 90 bp CCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGGACCCGATTGGGGCAGAGAAGCGAGCGGTGAACTaGTGGCTCTTGACTTCGTGG +
Preference number: 5 (lower is better)
Translates to: PWSWGWLVVWSLDPIGAEKRAVN*WLLTSW
Trigger: CCACGAAGTCAAGAGCCACAAGTTCACCGCTCGCTT...CTCTGCCCCAATCGGGTCCAGAGACCACACCACTAACCATCCCCAACTCCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp ACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTAGGCGGAACTTGTGTTaGTTCCGGGGGTCGTCCGTC +
Preference number: 5 (lower is better)
Translates to: TKMESRTPWSWGWLVVWSRRNLC*FRGSSV
Trigger: GACGGACGACCCCCGGAACAAACACAAGTTCCGCCT...AGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp GCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAGAACAATCCCCTGGCTTCAGGTaGAACACAAAGGTCTCATTC +
Preference number: 5 (lower is better)
Translates to: AGGLRGEVMASGWGSLEQSPGFR*NTKVSF
Trigger: GAATGAGACCTTTGTGTTCAACCTGAAGCCAGGGGA...TTGTTCTAGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp ATGCACGGCAGGCGGGCTGCGGGGAGAAGTGATGGCTTCGGGATGGGGAAGTCTAAACTTGCCCAGCTGTaGAATGTGGTACATCAAGTC +
Preference number: 5 (lower is better)
Translates to: MHGRRAAGRSDGFGMGKSKLAQL*NVVHQV
Trigger: GACTTGATGTACCACATTCAACAGCTGGGCAAGTTT...AGACTTCCCCATCCCGAAGCCATCACTTCTCCCCGCAGCCCGCCTGCCGTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp ACTACCAAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTTGGTCAGGAACCCCTaGCAGATGGCCACGGCTTCC +
Preference number: 5 (lower is better)
Translates to: TTKMESRTPWSWGWLVVWLVRNP*QMATAS
Trigger: GGAAGCCGTGGCCATCTGCAAGGGGTTCCTGACCAA...CCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTTGGTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS CCA 90 bp AGGATCCTGCCTTTCTTGGGGGAAACAGGTGGAAGGGAGAGGAGCTaGAGACTCGAAGGATCAAAGGAGCCACAGGGAAATTCCGAGGTG +
Preference number: 5 (lower is better)
Translates to: RILPFLGETGGRERS*RLEGSKEPQGNSEV
Trigger: CACCTCGGAATTTCCCTGTGGCTCCTTTGATCCTTCGAGTCTCCAGCTCCTCTCCCTTCCACCTGTTTCCCCCAAGAAAGGCAGGATCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS CCA 90 bp AAACGTAGCAGGGACCAGGATCCTGCCTTTCTTGGGGGAAACAGGTaGAAGGGAGAGGAGCTGGAGACTCGAAGGATCAAAGGAGCCACA +
Preference number: 5 (lower is better)
Translates to: KRSRDQDPAFLGGNR*KGEELETRRIKGAT
Trigger: TGTGGCTCCTTTGATCCTTCGAGTCTCCAGCTCCTCTCCCTTCCACCTGTTTCCCCCAAGAAAGGCAGGATCCTGGTCCCTGCTACGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS TCA 90 bp ACCAGGGAATGGCCTGATTCTATTCCCAGAACAGGGCCTGGCTTATaGCACCCTAGAAAATGGGTATTCGTCTGGGCGTGGTCGCTCACG +
Preference number: 5 (lower is better)
Translates to: TREWPDSIPRTGPGL*HPRKWVFVWAWSLT
Trigger: CGTGAGCGACCACGCCCAGACGAATACCCATTTTCTAGGGTGTCATAAGCCAGGCCCTGTTCTGGGAATAGAATCAGGCCATTCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682676.1
CDS-3UTR CAA 90 bp AAGATGGAGTCTCGAACCCCATGGAGTTGGGGATGGTTAGTGGTGTGGTCTCTGAGGATCCTGCCTTTCTaGGGGGAAACAGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: KMESRTPWSWGWLVVWSLRILPF*GETGGR
Trigger: CCTTCCACCTGTTTCCCCCAAGAAAGGCAGGATCCT...CAGAGACCACACCACTAACCATCCCCAACTCCATGGGGTTCGAGACTCCATCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS CCA 90 bp GGCTTTCACCGTTCGGGTCTTCTGTTTCGTCAGGTTCCGAGGGTCTaGGATGAGCTTCAGTTTCACATAGGGATCAGAGAGACCATTGGG +
Preference number: 5 (lower is better)
Translates to: GFHRSGLLFRQVPRV*DELQFHIGIRETIG
Trigger: CCCAATGGTCTCTCTGATCCCTATGTGAAACTGAAGCTCATCCCAGACCCTCGGAACCTGACGAAACAGAAGACCCGAACGGTGAAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263431.4
ENST00000474397.5
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS-3UTR CAA 90 bp AATCCTCCATATATCCCAGAAATCCCCAGAGCACAGCAGCGGGACGTACTGGAGGGGGTAGGTGACAGTTaGTTCCATGATGGCCTGAAA +
Preference number: 5 (lower is better)
Translates to: NPPYIPEIPRAQQRDVLEGVGDS*FHDGLK
Trigger: TTTCAGGCCATCATGGAACAAACTGTCACCTACCCC...CTCCAGTACGTCCCGCTGCTGTGCTCTGGGGATTTCTGGGATATATGGAGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS-3UTR CAA 90 bp CTAGAACAAAAGCTGATTGGGAGCCTCTGGGGAAAGAATCCTCCATATATCCCACACAAAGCTGCAGACTaGACATTGCAGGCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LEQKLIGSLWGKNPPYIPHKAAD*TLQALL
Trigger: AAGCAGGGCCTGCAATGTCAAGTCTGCAGCTTTGTG...TGGGATATATGGAGGATTCTTTCCCCAGAGGCTCCCAATCAGCTTTTGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263431.4
CDS CAA 72 bp GGAGGGGTCAGCGCTGGCGCCGCCCGCGTGAAGAACTaGTCAAAGTTCTCGCCGCTGCGGCCACACGGGCGG +
Preference number: 6 (lower is better)
Translates to: GGVSAGAARVKN*SKFSPLRPHGR
Trigger: CCGCCCGTGTGGCCGCAGCGGCGAGAACTTTGACAAGTTCTTCACGCGGGCGGCGCCAGCGCTGACCCCTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682676.1
ENST00000683513.1
CDS TCA 72 bp GGCGGTCTGGAGGGGTCAGCGCTGGCGCCGCCCGCGTaGAGAACTTGTCAAAGTTCTCGCCGCTGCGGCCAC +
Preference number: 6 (lower is better)
Translates to: GGLEGSALAPPA*RTCQSSRRCGH
Trigger: GTGGCCGCAGCGGCGAGAACTTTGACAAGTTCTTCACGCGGGCGGCGCCAGCGCTGACCCCTCCAGACCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682676.1
ENST00000683513.1
CDS CAA 90 bp AGGCGGTCTGGAGGGGTCAGCGCTGGCGCCGCCCGCGTGAAGAACTaGTCAAAGTTCTCGCCGCTGCGGCCACACGGGCGGGGTCTGAAA +
Preference number: 6 (lower is better)
Translates to: RRSGGVSAGAARVKN*SKFSPLRPHGRGLK
Trigger: TTTCAGACCCCGCCCGTGTGGCCGCAGCGGCGAGAACTTTGACAAGTTCTTCACGCGGGCGGCGCCAGCGCTGACCCCTCCAGACCGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682676.1
ENST00000683513.1
CDS TCA 72 bp CGTTGGGGACACCTAGTGGCGGCGGGTGAGATTACATaGCGGGCACAGGCACTGGGCTGGTGGGGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: RWGHLVAAGEIT*RAQALGWWGCG
Trigger: CCCGCAGCCCCACCAGCCCAGTGCCTGTGCCCGTCATGTAATCTCACCCGCCGCCACTAGGTGTCCCCAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263431.4
ENST00000682676.1
CDS CCA 72 bp GGGCCTCGCCAACAGTTACGTGGATCTCATCTGCTGTaGGAGCCCGGATCTCCAGCTGCAGGCGCCCGCGGC +
Preference number: 6 (lower is better)
Translates to: GPRQQLRGSHLL*EPGSPAAGARG
Trigger: GCCGCGGGCGCCTGCAGCTGGAGATCCGGGCTCCCACAGCAGATGAGATCCACGTAACTGTTGGCGAGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263431.4
ENST00000474397.5
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS TCA 72 bp GCGGAGGGGACGTTGGGGACACCTAGTGGCGGCGGGTaGGATTACATGACGGGCACAGGCACTGGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: AEGTLGTPSGGG*DYMTGTGTGLV
Trigger: CACCAGCCCAGTGCCTGTGCCCGTCATGTAATCTCACCCGCCGCCACTAGGTGTCCCCAACGTCCCCTCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263431.4
ENST00000682676.1
CDS GCA 72 bp TCCCCATCAGGCCCTGAGCCCAGGCGCTTCCCTGGGTaGTTGGTCAGGAACCCCTTGCAGATGGCCACGGCT +
Preference number: 6 (lower is better)
Translates to: SPSGPEPRRFPG*LVRNPLQMATA
Trigger: AGCCGTGGCCATCTGCAAGGGGTTCCTGACCAAGCACCCAGGGAAGCGCCTGGGCTCAGGGCCTGATGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682676.1
CDS CCA 72 bp CCTCTGAATCGCCTACGCCGGGGCCCAGACCAGCCATaGCCCCAGAAACGTAGCAGGGACCAGGATCCTGCC +
Preference number: 6 (lower is better)
Translates to: PLNRLRRGPDQP*PQKRSRDQDPA
Trigger: GGCAGGATCCTGGTCCCTGCTACGTTTCTGGGGCCATGGCTGGTCTGGGCCCCGGCGTAGGCGATTCAGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS CCA 72 bp CCGGGGGTCGTCCGTCTGGGGGCCCTTCCCAGCGCCTaGACACTCGAAGGTCACAAATTCGTGGCATCGTCG +
Preference number: 6 (lower is better)
Translates to: PGVVRLGALPSA*TLEGHKFVASS
Trigger: CGACGATGCCACGAATTTGTGACCTTCGAGTGTCCAGGCGCTGGGAAGGGCCCCCAGACGGACGACCCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000263431.4
ENST00000419486.1
ENST00000474397.5
ENST00000479081.5
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS GCA 72 bp CCGCACAGGGAGGGCACGCTACGCACACAGCGCCGGTaGACGTTCATCTCGCAGCAGGAGCATTTCATGCCC +
Preference number: 6 (lower is better)
Translates to: PHREGTLRTQRR*TFISQQEHFMP
Trigger: GGGCATGAAATGCTCCTGCTGCGAGATGAACGTGCACCGGCGCTGTGTGCGTAGCGTGCCCTCCCTGTGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263431.4
ENST00000419486.1
ENST00000474397.5
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS TCA 72 bp GCCATGTGCACGGATGGTAGGTTCCCCATCAGGCCCTaGGCCCAGGCGCTTCCCTGGGTGCTTGGTCAGGAA +
Preference number: 6 (lower is better)
Translates to: AMCTDGRFPIRP*AQALPWVLGQE
Trigger: TTCCTGACCAAGCACCCAGGGAAGCGCCTGGGCTCAGGGCCTGATGGGGAACCTACCATCCGTGCACATGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682676.1
ENST00000683513.1
CDS TCA 72 bp GGGCATCCGGGTGCACGAAGTCGGGGTTCACGTAGGTaGAGCCCTGGAAATCGGCCTGGTCGATGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: GHPGARSRGSRR*SPGNRPGRCWP
Trigger: TGGCCAGCATCGACCAGGCCGATTTCCAGGGCTTCACCTACGTGAACCCCGACTTCGTGCACCCGGATGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682676.1
ENST00000683513.1
CDS GCA 72 bp GTTACGGGCCTCGCCAACAGTTACGTGGATCTCATCTaGTGTGGGAGCCCGGATCTCCAGCTGCAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: VTGLANSYVDLI*CGSPDLQLQAP
Trigger: GGGCGCCTGCAGCTGGAGATCCGGGCTCCCACAGCAGATGAGATCCACGTAACTGTTGGCGAGGCCCGTAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263431.4
ENST00000474397.5
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS GCA 72 bp GTGAACTTGTGGCTCTTGACTTCGTGGACCACCTTCTaGCTCAGGGCCCCCTTTCTCCAGGTGCGGAGCGCG +
Preference number: 6 (lower is better)
Translates to: VNLWLLTSWTTF*LRAPFLQVRSA
Trigger: CGCGCTCCGCACCTGGAGAAAGGGGGCCCTGAGGCAGAAGGTGGTCCACGAAGTCAAGAGCCACAAGTTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419486.1
CDS CCA 72 bp CATGAGGAAGCTGAAGTCGGAGATGTGCAGGCGTCCTaGACTCGCCCCGAAGAAGCAGCGCTTGGGGTCGGT +
Preference number: 6 (lower is better)
Translates to: HEEAEVGDVQAS*TRPEEAALGVG
Trigger: ACCGACCCCAAGCGCTGCTTCTTCGGGGCGAGTCCAGGACGCCTGCACATCTCCGACTTCAGCTTCCTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682268.1
ENST00000682676.1
ENST00000682902.1
ENST00000683513.1
CDS GCA 72 bp CTTTCTCTGACTCAGGCTGTGCCAGGGACGCCCCAGTaGCTGAGGCTGTCTCCATTACAGCAGCATTGCTCC +
Preference number: 6 (lower is better)
Translates to: LSLTQAVPGTPQ*LRLSPLQQHCS
Trigger: GGAGCAATGCTGCTGTAATGGAGACAGCCTCAGGCACTGGGGCGTCCCTGGCACAGCCTGAGTCAGAGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682676.1
CDS CCA 72 bp CCACACCTCCACGCTGAGCCGGCGCTCCACATCCCCTaGCTTCAGGTTGAACACAAAGGTCTCATTCCACAC +
Preference number: 6 (lower is better)
Translates to: PHLHAEPALHIP*LQVEHKGLIPH
Trigger: GTGTGGAATGAGACCTTTGTGTTCAACCTGAAGCCAGGGGATGTGGAGCGCCGGCTCAGCGTGGAGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS CAA 90 bp AGCCATGGCCCCAGAAACGTAGCAGGGACCAGGATCCTGCCTTTCTaGGGGGAAACAGGTGGAAGGGAGAGGAGCTGGAGACTCGAAGGA +
Preference number: 6 (lower is better)
Translates to: SHGPRNVAGTRILPF*GETGGRERSWRLEG
Trigger: TCCTTCGAGTCTCCAGCTCCTCTCCCTTCCACCTGTTTCCCCCAAGAAAGGCAGGATCCTGGTCCCTGCTACGTTTCTGGGGCCATGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS CAA 90 bp GCCAGGGACGCCCCAGTGCCTGAGGCTGTCTCCATTACAGCAGCATaGCTCCTCGTTGTGAATGTCTGGGTTTGTAACTTTGTCCTCCAC +
Preference number: 6 (lower is better)
Translates to: ARDAPVPEAVSITAA*LLVVNVWVCNFVLH
Trigger: GTGGAGGACAAAGTTACAAACCCAGACATTCACAACGAGGAGCAATGCTGCTGTAATGGAGACAGCCTCAGGCACTGGGGCGTCCCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682676.1
CDS CCA 72 bp CCTTTCTTGGGGGAAACAGGTGGAAGGGAGAGGAGCTaGAGACTCGAAGGATCAAAGGAGCCACAGGGAAAT +
Preference number: 6 (lower is better)
Translates to: PFLGETGGRERS*RLEGSKEPQGN
Trigger: ATTTCCCTGTGGCTCCTTTGATCCTTCGAGTCTCCAGCTCCTCTCCCTTCCACCTGTTTCCCCCAAGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263431.4
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS TCA 72 bp GGGTCTTCTGTTTCGTCAGGTTCCGAGGGTCTGGGATaGGCTTCAGTTTCACATAGGGATCAGAGAGACCAT +
Preference number: 6 (lower is better)
Translates to: GSSVSSGSEGLG*ASVSHRDQRDH
Trigger: ATGGTCTCTCTGATCCCTATGTGAAACTGAAGCTCATCCCAGACCCTCGGAACCTGACGAAACAGAAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000263431.4
ENST00000474397.5
ENST00000682028.1
ENST00000682268.1
ENST00000682902.1
ENST00000683513.1
CDS CAA 72 bp GCCCCAGTGCCTGAGGCTGTCTCCATTACAGCAGCATaGCTCCTCGTTGTGAATGTCTGGGTTTGTAACTTT +
Preference number: 6 (lower is better)
Translates to: APVPEAVSITAA*LLVVNVWVCNF
Trigger: AAAGTTACAAACCCAGACATTCACAACGAGGAGCAATGCTGCTGTAATGGAGACAGCCTCAGGCACTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682676.1
CDS TCA 72 bp AGGCTGTCTCCATTACAGCAGCATTGCTCCTCGTTGTaGATGTCTGGGTTTGTAACTTTGTCCTCCACTAGA +
Preference number: 6 (lower is better)
Translates to: RLSPLQQHCSSL*MSGFVTLSSTR
Trigger: TCTAGTGGAGGACAAAGTTACAAACCCAGACATTCACAACGAGGAGCAATGCTGCTGTAATGGAGACAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682676.1
CDS TCA 72 bp GCATCATATCAACTTTTCCAACAGATGGAAGTAAAGTaGCTTCAGGAATGGGAGCATTTTTCTAATAGGCAC +
Preference number: 6 (lower is better)
Translates to: ASYQLFQQMEVK*LQEWEHFSNRH
Trigger: GTGCCTATTAGAAAAATGCTCCCATTCCTGAAGTCACTTTACTTCCATCTGTTGGAAAAGTTGATATGATGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682902.1