RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKCD (Homo sapiens)

Ensembl gene IDs: ENSG00000163932

Ensembl transcript IDs: ENST00000330452.8, ENST00000394729.6, ENST00000464818.1, ENST00000477794.2, ENST00000478843.5, ENST00000487897.5, ENST00000650739.1, ENST00000650940.1, ENST00000651505.1, ENST00000652449.1, ENST00000654719.1

Found 705 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGG +
Preference number: 1 (lower is better)
Translates to: AEEKQIHTQFTEEVP*EPGQTAAKDALGAG
Trigger: CCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
3UTR CCA 90 bp CGGTGCGGCATGTCGATGTTGAAGCGTTCTTTCTGGAACTGGAGGTaGGGGTATCACAGGCTGAGGGTCACGTGCCAGCTCCAGCCTCTT +
Preference number: 1 (lower is better)
Translates to: RCGMSMLKRSFWNWR*GYHRLRVTCQLQPL
Trigger: AAGAGGCTGGAGCTGGCACGTGACCCTCAGCCTGTGATACCCCCACCTCCAGTTCCAGAAAGAACGCTTCAACATCGACATGCCGCACCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CCA 90 bp TTGAAGCGGTGCGGCATGTCGATGTTGAAGCGTTCTTTCTGGAACTaGAGGTGGGGGTATCACAGGCTGAGGGTCACGTGCCAGCTCCAG +
Preference number: 1 (lower is better)
Translates to: LKRCGMSMLKRSFWN*RWGYHRLRVTCQLQ
Trigger: CTGGAGCTGGCACGTGACCCTCAGCCTGTGATACCCCCACCTCCAGTTCCAGAAAGAACGCTTCAACATCGACATGCCGCACCGCTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR TCA 90 bp TCTTGCATGTCCTCCCCAGCAACTCCGGTCTTCTTCTCGAAACCCTaGTATATCCCAACAGGCTCTGAGGAGGCTGAGTCTGATCTCCGG +
Preference number: 1 (lower is better)
Translates to: SCMSSPATPVFFSKP*YIPTGSEEAESDLR
Trigger: CCGGAGATCAGACTCAGCCTCCTCAGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CCA 90 bp CTCCAGGATGTCCTTGGACTCCTTGGTGATCCAGCGGGGATAATGTaGCGTGTCCACACGGATGGACTCGAAGAGTTCATCCTCATCATC +
Preference number: 1 (lower is better)
Translates to: LQDVLGLLGDPAGIM*RVHTDGLEEFILII
Trigger: GATGATGAGGATGAACTCTTCGAGTCCATCCGTGTGGACACGCCACATTATCCCCGCTGGATCACCAAGGAGTCCAAGGACATCCTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR GCA 90 bp CAGGAGGTGCTCGAATTTGGGGTTCACAAAGGAGAAGCCAGCGAATaGAGACTGGTCCATGGAGTCGATGAGGTTCTTGTCGCTGTAGGA +
Preference number: 1 (lower is better)
Translates to: QEVLEFGVHKGEASE*RLVHGVDEVLVAVG
Trigger: TCCTACAGCGACAAGAACCTCATCGACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: YHESPARRQPRTLWGQGRSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR CCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: QRKYHESPARRQPRTLWGHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR CCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: STMRARPDGSQGRSGGRGSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR GCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGCCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: SQRKYHESPARRQPRTLWPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR CCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: SQRKYHESPARRQPRTLWHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR GCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: HSSQRKYHESPARRQPRTPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR CCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR TCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGGGGTATCACAGGCTaGGGGTCACGTGCCAGCTCC +
Preference number: 2 (lower is better)
Translates to: KADSHTVHRGSTMRARPDGGITG*GSRASS
Trigger: GGAGCTGGCACGTGACCCTCAGCCTGTGATACCCCC...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCCTCCGGGAGGCTCTCTaGGTGACTTGGTTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVLREAL*VTWFKA
Trigger: GGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAG...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR GCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACCCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: KADSHTVHRGSTMRARPDPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR CCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGTTGAAGCGTTCTTTCTaGAACTGGAGGTGGGGGTAT +
Preference number: 2 (lower is better)
Translates to: SQRKYHESPARRQPRTLWLKRSF*NWRWGY
Trigger: ATACCCCCACCTCCAGTTCCAGAAAGAACGCTTCAA...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR GCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCTCCCGAAGCTGCCTTTaGCCAGGACCTTGTGGAAGA +
Preference number: 2 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVSRSCL*PGPCGR
Trigger: TCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGA...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp GTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTACTCCATGGAAGGGGGACTaGCCAATGAGCATCTCGTAC +
Preference number: 2 (lower is better)
Translates to: VAVGEARLLVQELLVKVTPWKGD*PMSISY
Trigger: GTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGG...AGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: KADSHTVHRGSTMRARPDSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR-3UTR CCA 90 bp TCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTGGATCGGCAATCTTGATGTaGCCATCCCGGTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: SQPLGWFPFKELLQDVLGSAILM*PSRSSS
Trigger: GCTGCTGGACCGGGATGGCCACATCAAGATTGCCGA...TCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR TCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCA +
Preference number: 2 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVTEEVP*EPGQTA
Trigger: TGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGT...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
3UTR-3UTR TCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCAGAAGGGGTGGATTTTaGTGTTTCCGGTCACTCCCA +
Preference number: 2 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVRRGGF*CFRSLP
Trigger: TGGGAGTGACCGGAAACATCAAAATCCACCCCTTCT...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
3UTR-3UTR CCA 90 bp ATCAGGACCACATCCTTCTTGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCCGCTCTCTGGGTGACTTaGTTCAAGGCCTCAGCCAAA +
Preference number: 2 (lower is better)
Translates to: IRTTSFLRALMAKYSPLPALWVT*FKASAK
Trigger: TTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGC...GGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp CACTCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTAGGTGGTCCTTGGTCTaGAAGGTGCAGATGAGGTGG +
Preference number: 2 (lower is better)
Translates to: HSQPLGWFPFKELLQDVLRWSLV*KVQMRW
Trigger: CCACCTCATCTGCACCTTCCAGACCAAGGACCACCT...AAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR GCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
3UTR-3UTR GCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 2 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
3UTR-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
3UTR-3UTR CCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATTCTGGAACTGGAGGTaGGGGTATCACAGGCTGAGG +
Preference number: 2 (lower is better)
Translates to: KSRFTHSSQRKYHESPARFWNWR*GYHRLR
Trigger: CCTCAGCCTGTGATACCCCCACCTCCAGTTCCAGAA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGCCAGCGGGGATAATGTaGCGTGTCCACACGGATGGA +
Preference number: 2 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRPAGIM*RVHTDG
Trigger: TCCATCCGTGTGGACACGCCACATTATCCCCGCTGG...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp GTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTACTTCCCAGCCTCTTGGTTaGTTCCCTTTCAAAGAGCTT +
Preference number: 2 (lower is better)
Translates to: VAVGEARLLVQELLVKVTSQPLG*FPFKEL
Trigger: AAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA...AGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR TCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCA +
Preference number: 2 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVTEEVP*EPGQTA
Trigger: TGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGT...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
3UTR-3UTR TCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCGCGGCATGTCGATGTTaGAGCGTTCTTTCTGGAACT +
Preference number: 2 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAAACRC*SVLSGT
Trigger: AGTTCCAGAAAGAACGCTTCAACATCGACATGCCGC...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR TCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGCAAAGTCGGCAATCTTaGTGTGGCCATCCCGGTCCA +
Preference number: 2 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRQSRQS*CGHPGP
Trigger: TGGACCGGGATGGCCACATCAAGATTGCCGACTTTG...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR TCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGGGTCCATGGAGTCGATaGGGTTCTTGTCGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRGPWSR*GSCRCR
Trigger: CCTACAGCGACAAGAACCTCATCGACTCCATGGACC...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR GCA 90 bp CAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTGGACTCTCACACTTTAATCCCTaGTTCACCAGTCCCCAGAGC +
Preference number: 2 (lower is better)
Translates to: QPLGWFPFKELLQDVLGLSHFNP*FTSPQS
Trigger: GCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGA...GAGTCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR GCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTATGTTGCACTTGCTGCTaGCCTCCCAGATCTTGCCGT +
Preference number: 2 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVCCTCC*PPRSCR
Trigger: ACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACA...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp TCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTGGACAGCGGCATAAAACGTaGCACGGTAGAGTTCAAAGC +
Preference number: 2 (lower is better)
Translates to: SQPLGWFPFKELLQDVLGQRHKT*HGRVQS
Trigger: GCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTG...TCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CAA 90 bp TTGAAGAAGGGGTGGATTTTGATGTTTCCGGTCACTCCCAGCCTCTaGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: LKKGWILMFPVTPSL*VGSLSKSFSRMSLD
Trigger: GTCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGACCGGAAACATCAAAATCCACCCCTTCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 2 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
3UTR-3UTR CCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTCGTTCTTTCTGGAACTaGAGGTGGGGGTATCACAGG +
Preference number: 2 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSRSFWN*RWGYHR
Trigger: CCTGTGATACCCCCACCTCCAGTTCCAGAAAGAACG...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CAA 90 bp TTTTCCAGCAGAGTCCAGTTTATGGTCTTGAAGAAGGGGTGGATTTaGATGTTTCCGGTCACTCCCAGCCTCTTGGTTGGTTCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: FSSRVQFMVLKKGWI*MFPVTPSLLVGSLS
Trigger: TGAAAGGGAACCAACCAAGAGGCTGGGAGTGACCGGAAACATCAAAATCCACCCCTTCTTCAAGACCATAAACTGGACTCTGCTGGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR TCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTGTAGTTGTGAACCTTaGAGCGGTGCGGCATGTCGA +
Preference number: 2 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFCSCEP*SGAACR
Trigger: TCGACATGCCGCACCGCTTCAAGGTTCACAACTACA...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CAA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCGGTCCCACTGTTGTCTaGCATGTCCTCCCCAGCAAC +
Preference number: 3 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVGPTVV*HVLPSN
Trigger: GTTGCTGGGGAGGACATGCAAGACAACAGTGGGACC...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR TCA 72 bp AAGCAGATTCACACACAGTTCACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTG +
Preference number: 3 (lower is better)
Translates to: KQIHTQFTEEVP*EPGQTAAKDAL
Trigger: CAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR TCA 72 bp GTTCTTTCTGGAACTGGAGGTGGGGGTATCACAGGCTaGGGGTCACGTGCCAGCTCCAGCCTCTTCTTCAAC +
Preference number: 3 (lower is better)
Translates to: VLSGTGGGGITG*GSRASSSLFFN
Trigger: GTTGAAGAAGAGGCTGGAGCTGGCACGTGACCCTCAGCCTGTGATACCCCCACCTCCAGTTCCAGAAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR TCA 72 bp AGAAGCCAGCGAATGCAGACTGGTCCATGGAGTCGATaGGGTTCTTGTCGCTGTAGGAGAGGCGCGCCTTCT +
Preference number: 3 (lower is better)
Translates to: RSQRMQTGPWSR*GSCRCRRGAPS
Trigger: AGAAGGCGCGCCTCTCCTACAGCGACAAGAACCTCATCGACTCCATGGACCAGTCTGCATTCGCTGGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CCA 72 bp TGCGGCATGTCGATGTTGAAGCGTTCTTTCTGGAACTaGAGGTGGGGGTATCACAGGCTGAGGGTCACGTGC +
Preference number: 3 (lower is better)
Translates to: CGMSMLKRSFWN*RWGYHRLRVTC
Trigger: GCACGTGACCCTCAGCCTGTGATACCCCCACCTCCAGTTCCAGAAAGAACGCTTCAACATCGACATGCCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CAA 90 bp GGTGCTGGCCCGGCTCTCCCCGAATATGTTCTCTTTGCACATCCCAAAGTCGGCAGTTCAAAGCGGCCTTaGTCCTGGATGTGGTACATC +
Preference number: 3 (lower is better)
Translates to: GAGPALPEYVLFAHPKVGSSKRP*SWMWYI
Trigger: GATGTACCACATCCAGGACAAAGGCCGCTTTGAACT...GCCGACTTTGGGATGTGCAAAGAGAACATATTCGGGGAGAGCCGGGCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CCA 72 bp ATGTCGATGTTGAAGCGTTCTTTCTGGAACTGGAGGTaGGGGTATCACAGGCTGAGGGTCACGTGCCAGCTC +
Preference number: 3 (lower is better)
Translates to: MSMLKRSFWNWR*GYHRLRVTCQL
Trigger: GAGCTGGCACGTGACCCTCAGCCTGTGATACCCCCACCTCCAGTTCCAGAAAGAACGCTTCAACATCGACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CCA 72 bp AACAGGTGGTCCTTGGTCTGGAAGGTGCAGATGAGGTaGGTGAGAAAGGGATTCTCTGCGGCAAGTGTCAGC +
Preference number: 3 (lower is better)
Translates to: NRWSLVWKVQMR*VRKGFSAASVS
Trigger: GCTGACACTTGCCGCAGAGAATCCCTTTCTCACCCACCTCATCTGCACCTTCCAGACCAAGGACCACCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CCA 72 bp GTCCTTGGACTCCTTGGTGATCCAGCGGGGATAATGTaGCGTGTCCACACGGATGGACTCGAAGAGTTCATC +
Preference number: 3 (lower is better)
Translates to: VLGLLGDPAGIM*RVHTDGLEEFI
Trigger: GATGAACTCTTCGAGTCCATCCGTGTGGACACGCCACATTATCCCCGCTGGATCACCAAGGAGTCCAAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR TCA 72 bp TCCTCCCCAGCAACTCCGGTCTTCTTCTCGAAACCCTaGTATATCCCAACAGGCTCTGAGGAGGCTGAGTCT +
Preference number: 3 (lower is better)
Translates to: SSPATPVFFSKP*YIPTGSEEAES
Trigger: AGACTCAGCCTCCTCAGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CAA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAGGCTCTCTGGGTGACTaGGTTCAAGGCCTCAGCCAA +
Preference number: 3 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVGSLGD*VQGLSQ
Trigger: TTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CAA 90 bp CAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTGGACTCTCCTTCTTGAGGGCCTaGATGGCAAAGTACTCTCCT +
Preference number: 3 (lower is better)
Translates to: QPLGWFPFKELLQDVLGLSFLRA*MAKYSP
Trigger: AGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGA...GAGTCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR GCA 72 bp CTCGAATTTGGGGTTCACAAAGGAGAAGCCAGCGAATaGAGACTGGTCCATGGAGTCGATGAGGTTCTTGTC +
Preference number: 3 (lower is better)
Translates to: LEFGVHKGEASE*RLVHGVDEVLV
Trigger: GACAAGAACCTCATCGACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCCTTTGTGAACCCCAAATTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CAA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGATGAAGTTGTTGATGTaGCACTTGCTGCTGCCCTCC +
Preference number: 3 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRMKLLM*HLLLPS
Trigger: GGAGGGCAGCAGCAAGTGCAACATCAACAACTTCAT...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CCA 72 bp GATTTTGATGTTTCCGGTCACTCCCAGCCTCTTGGTTaGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTT +
Preference number: 3 (lower is better)
Translates to: DFDVSGHSQPLG*FPFKELLQDVL
Trigger: AAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGACCGGAAACATCAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CAA 90 bp CACTCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTTTGTGGAAGATGAAGTaGTTGATGTTGCACTTGCTG +
Preference number: 3 (lower is better)
Translates to: HSQPLGWFPFKELLQDVLLWKMK*LMLHLL
Trigger: CAGCAAGTGCAACATCAACAACTTCATCTTCCACAA...AAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR-3UTR CAA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTGCGGCATGTCGATGTaGAAGCGTTCTTTCTGGAAC +
Preference number: 3 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFCGMSM*KRSFWN
Trigger: GTTCCAGAAAGAACGCTTCAACATCGACATGCCGCA...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGGGGCCAAGCGGCCAGTaGGGTGTGGCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRGPSGQ*GVARAS
Trigger: GGAGGCCCGGGCCACACCTCACTGGCCGCTTGGCCC...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000652449.1
CDS-3UTR CCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGGGAACGGCGCCATGGTaGGGCCTGCAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRGTAPW*GLQWGW
Trigger: CCAGCCCCACTGCAGGCCCCACCATGGCGCCGTTCC...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGCAGGAACGGCGCCATaGTGGGGCCTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRAGTAP*WGLQWG
Trigger: GCCCCACTGCAGGCCCCACCATGGCGCCGTTCCTGC...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGGGGCCAAGCGGCCAGTaGGGTGTGGCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWGPSGQ*GVARAS
Trigger: GGAGGCCCGGGCCACACCTCACTGGCCGCTTGGCCC...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000652449.1
CDS-3UTR GCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCGGGTGCCGCAGAAGGTaGTGGCCCGGCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGGCRRR*WPGSPR
Trigger: TCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCC...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGCCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCAGTGGGGCTCCCGTTaGAGGGGCAGGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGQWGSR*RGRRQG
Trigger: CCCTTGGCGCCTGCCCCTGCAACGGGAGCCCCACTG...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000394729.6
CDS-3UTR CCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCGCAGGAACGGCGCCATaGTGGGGCCTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGAGTAP*WGLQWG
Trigger: GCCCCACTGCAGGCCCCACCATGGCGCCGTTCCTGC...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCACGGCACAGAAGGGCTaGTTCGCCTCGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGTAQKG*FASSSA
Trigger: GGCCGAGGACGAGGCGAACCAGCCCTTCTGTGCCGT...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGGAACGGCGCCATGGTaGGGCCTGCAGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGGTAPW*GLQWGS
Trigger: GGAGCCCCACTGCAGGCCCCACCATGGCGCCGTTCC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000394729.6
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGCCTGGCCAGTTCCCTaGAGACCTCCCGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRAWPVP*RPPVAG
Trigger: CCCTGCAACGGGAGGTCTGCAGGGAACTGGCCAGGC...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR CCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTGGTGGGGCCTGCAGTaGGGCTCCCTGACCTCTCGG +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGWWGLQ*GSLTSR
Trigger: CCGAGAGGTCAGGGAGCCCCACTGCAGGCCCCACCA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000654719.1
CDS-3UTR GCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGTGCCATTGTTCTTCTTaGAGCGCTCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRCHCSS*SARPAP
Trigger: CGGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCA...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGCAGGAACGGCGCCATaGTGGGGCCTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWAGTAP*WGLQWG
Trigger: GCCCCACTGCAGGCCCCACCATGGCGCCGTTCCTGC...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGCGGCGGTTCATCGTTaGGAACTTGGCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGAAVHR*ELGLVL
Trigger: GAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGC...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGTCGGCAATCTTGATGTaGCCATCCCGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRSAILM*PSRSSS
Trigger: GCTGCTGGACCGGGATGGCCACATCAAGATTGCCGA...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGACGGGCCTGCCCCCTTaGCTGGCCAGTTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWTGLPP*LASSLQ
Trigger: CTGCAGGGAACTGGCCAGGCAAGGGGGCAGGCCCGT...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCCTGGCTCCCGCTGCTaGTACAACGCACCAACCACC +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGPGSRC*YNAPTT
Trigger: GGTGGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGG...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGCGATATAGTCAGGGGTaGCGCAGAAGGTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRRYSQG*RRRCWP
Trigger: GGGCCAGCACCTTCTGCGGCACCCCTGACTATATCG...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGCAGGAACGGCGCCATaGTGGGGCCTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGAGTAP*WGLQWG
Trigger: GCCCCACTGCAGGCCCCACCATGGCGCCGTTCCTGC...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGCAGACATCAACACCTTaGCCTGAGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRQTSTP*PEAAGP
Trigger: TGGACCTGCAGCCTCAGGCCAAGGTGTTGATGTCTG...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGAGGTGGTCCTTGGTCTaGAAGGTGCAGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRRWSLV*KVQMRW
Trigger: CCACCTCATCTGCACCTTCCAGACCAAGGACCACCT...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGCCAGCGAATGCAGACTaGTCCATGGAGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRPANAD*SMESMR
Trigger: CCTCATCGACTCCATGGACCAGTCTGCATTCGCTGG...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGCCAGCTCATAGGAGTTaGAGGCGATGCGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRPAHRS*RRCAGT
Trigger: CGTTCCTGCGCATCGCCTTCAACTCCTATGAGCTGG...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGATCAACACCTTGGCCTaGGGCTGCAGGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGINTLA*GCRSSQ
Trigger: CTGGCTGGACCTGCAGCCTCAGGCCAAGGTGTTGAT...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGGGAGGCTCTCTGGGTaGCTTGGTTCAAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGGRLSG*LGSRPQ
Trigger: CTGAGGCCTTGAACCAAGTCACCCAGAGAGCCTCCC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
64% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCCAAAGTCGGCAATCTTaGTGTGGCCATCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGQSRQS*CGHPGP
Trigger: TGGACCGGGATGGCCACATCAAGATTGCCGACTTTG...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGGCCTGGCCAGTTCCCTaGAGACCTCCCGTTGCAGGG +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWAWPVP*RPPVAG
Trigger: CCCTGCAACGGGAGGTCTGCAGGGAACTGGCCAGGC...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGCTTCTCAACCATGGTaGACTCCACGTCGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGASQPW*TPRRRR
Trigger: TCGACGACGACGTGGAGTGCACCATGGTTGAGAAGC...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGAGAAAGGGATTCTCTaGGGCAAGTGTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGEKGIL*GKCQHP
Trigger: CGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTC...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTCGCTCGGGAGATGTaGGCTACAGCCGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGVAREM*ATAASG
Trigger: GCCCGAGGCGGCTGTAGCCCACATCTCCCGAGCGAC...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000652449.1
CDS-3UTR CCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGCCTGCCCCCTTGCCTaGCCAGTTCCCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWACPLA*PVPCRP
Trigger: AGGTCTGCAGGGAACTGGCCAGGCAAGGGGGCAGGC...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR CCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGCGGCGGTTCATCGTTaGGAACTTGGCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGAAVHR*ELGLVL
Trigger: GAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCAGGTGGTCCTTGGTCTaGAAGGTGCAGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGRWSLV*KVQMRW
Trigger: CCACCTCATCTGCACCTTCCAGACCAAGGACCACCT...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCCCAGCGAATGCAGACTaGTCCATGGAGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGPANAD*SMESMR
Trigger: CCTCATCGACTCCATGGACCAGTCTGCATTCGCTGG...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCGGATTTTGGCCTGTTTaGTGGCTCCGCGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGGFWPV*WLRGGS
Trigger: TGAACCGCCGCGGAGCCATCAAACAGGCCAAAATCC...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGGATTTTGGCCTGTTTaGTGGCTCCGCGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGGFWPV*WLRGGS
Trigger: TGAACCGCCGCGGAGCCATCAAACAGGCCAAAATCC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGCAAAGTCGGCAATCTTaGTGTGGCCATCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRQSRQS*CGHPGP
Trigger: TGGACCGGGATGGCCACATCAAGATTGCCGACTTTG...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTGCCATTGTTCTTCTTaGAGCGCTCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGCHCSS*SARPAP
Trigger: CGGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGGCCAGAACTCAGCCTTaGCATTGTTCTTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRARTQP*HCSSCS
Trigger: GCTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGC...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGTCCCCAGAGCAGGCTaGCGCAGTGGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWVPRAG*RSGHRR
Trigger: CCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGAC...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGTCACACTTTAATCCCTaGTTCACCAGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRSHFNP*FTSPQS
Trigger: GCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGA...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGTGTTGCACTTGCTGCTaGCCTCCCAGATCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRCCTCC*PPRSCR
Trigger: ACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACA...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGTCCCGAAGCTGCCTTTaGCCAGGACCTTGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRSRSCL*PGPCGR
Trigger: TCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGA...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGCTTCTCAACCATGGTaGACTCCACGTCGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRASQPW*TPRRRR
Trigger: TCGACGACGACGTGGAGTGCACCATGGTTGAGAAGC...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGAGAAAGGGATTCTCTaGGGCAAGTGTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGREKGIL*GKCQHP
Trigger: CGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTC...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGCAGCGGCATAAAACGTaGCACGGTAGAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRQRHKT*HGRVQS
Trigger: GCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTG...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGCCATGGAAGGGGGACTaGCCAATGAGCATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRPWKGD*PMSISY
Trigger: GTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGG...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCAGCGGGGATAATGTaGCGTGTCCACACGGATGGA +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGPAGIM*RVHTDG
Trigger: TCCATCCGTGTGGACACGCCACATTATCCCCGCTGG...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCCAGCGGGGATAATGTaGCGTGTCCACACGGATGGA +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGPAGIM*RVHTDG
Trigger: TCCATCCGTGTGGACACGCCACATTATCCCCGCTGG...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCTTTGGGCCTGAAAGGTaGCTCCAACCTCCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGFGPER*LQPPLF
Trigger: GAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAA...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGGGCCAAGCGGCCAGTaGGGTGTGGCCCGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPGPSGQ*GVARAS
Trigger: GGAGGCCCGGGCCACACCTCACTGGCCGCTTGGCCC...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000652449.1
CDS-3UTR TCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGGCGGCATGTCGATGTTaGAGCGTTCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRAACRC*SVLSGI
Trigger: TATTCCAGAAAGAACGCTTCAACATCGACATGCCGC...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGGGGAGGCTCTCTGGGTaGCTTGGTTCAAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWGRLSG*LGSRPQ
Trigger: CTGAGGCCTTGAACCAAGTCACCCAGAGAGCCTCCC...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGAGGCTCTCTGGGTaGCTTGGTTCAAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWGRLSG*LGSRPQ
Trigger: CTGAGGCCTTGAACCAAGTCACCCAGAGAGCCTCCC...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAAAGTCGGCAATCTTaGTGTGGCCATCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGQSRQS*CGHPGP
Trigger: TGGACCGGGATGGCCACATCAAGATTGCCGACTTTG...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCTTGGACTCCTTGGTaGTCCAGCGGGGATAATGTG +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGPWTPW*SSGDNV
Trigger: CACATTATCCCCGCTGGATCACCAAGGAGTCCAAGG...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCACTTCACTTTGGGCCTaGAAGGTGGCTCCAACCTCC +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGTSLWA*KVAPTS
Trigger: GGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGT...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGGTCCATGGAGTCGATaGGGTTCTTGTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGGPWSR*GSCRCR
Trigger: CCTACAGCGACAAGAACCTCATCGACTCCATGGACC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWTEEVP*EPGQTA
Trigger: TGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGT...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCAGGAGAAACGGGCCTaGCCCCTTGCCTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTQEKRA*PLAWPV
Trigger: AACTGGCCAGGCAAGGGGGCAGGCCCGTTTCTCCTG...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGGGGGCTCCCAGCTCCTaGTTGTCCTTAGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVGAPSS*LSLVLA
Trigger: AGCCAGGACTAAGGACAAGCAGGAGCTGGGAGCCCC...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGCCAGAACTCAGCCTTaGCATTGTTCTTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGARTQP*HCSSCS
Trigger: GCTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGC...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGTCCCCAGAGCAGGCTaGCGCAGTGGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVVPRAG*RSGHRR
Trigger: CCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGAC...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGTCCCCAGAGCAGGCTaGCGCAGTGGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGVPRAG*RSGHRR
Trigger: CCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGAC...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGCGATATAGTCAGGGGTaGCGCAGAAGGTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVRYSQG*RRRCWP
Trigger: GGGCCAGCACCTTCTGCGGCACCCCTGACTATATCG...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCGGAGAAGCCAGCGAATaGAGACTGGTCCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGGEASE*RLVHGV
Trigger: GACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCC...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGCAATCTTCCAGGAGGTaGTCGAATTTGGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRQSSRR*SNLGFT
Trigger: TGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTG...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTCATCGTTGGGAACTTaGCCTCGTCCTCACTGCGCA +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGSSLGT*PRPHCA
Trigger: TGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCTTCTCCCGGCATTTATaGTGCACATTCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGFSRHL*CTFMPQ
Trigger: CTGCGGCATGAATGTGCACCATAAATGCCGGGAGAA...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGCTCTCTGGGTGACTTaGTTCAAGGCCTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRALWVT*FKASAK
Trigger: TTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGC...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGCTCCGGGAGGCTCTCTaGGTGACTTGGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWLREAL*VTWFKA
Trigger: GGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAG...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGAAGCGGCCTTTGTCCTaGATGTGGTACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRKRPLS*MWYIRS
Trigger: GGACCTGATGTACCACATCCAGGACAAAGGCCGCTT...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGAGTTACTGTAGTCTCTaGGTGACTTCACTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRSYCSL*VTSLWA
Trigger: GGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACT...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTATCAACACCTTGGCCTaGGGCTGCAGGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGINTLA*GCRSSQ
Trigger: CTGGCTGGACCTGCAGCCTCAGGCCAAGGTGTTGAT...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGGGATTTTGGCCTGTTTaGTGGCTCCGCGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWGFWPV*WLRGGS
Trigger: TGAACCGCCGCGGAGCCATCAAACAGGCCAAAATCC...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGGGATTTTGGCCTGTTTaGTGGCTCCGCGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVGFWPV*WLRGGS
Trigger: TGAACCGCCGCGGAGCCATCAAACAGGCCAAAATCC...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCCAGTGCATCTGCCGATaGTCTTGTCGATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGQCICR*SCRCIS
Trigger: AGAAATGCATCGACAAGATCATCGGCAGATGCACTG...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCTGTAGTTGTGAACCTTaGAGCGGTGCGGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGCSCEP*SGAACR
Trigger: TCGACATGCCGCACCGCTTCAAGGTTCACAACTACA...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGAGAAGGGGTGGATTTTaGTGTTTCCGGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRRRGGF*CFRSLP
Trigger: TGGGAGTGACCGGAAACATCAAAATCCACCCCTTCT...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTAGTCCTGGCTCCCGCTaGTGCTACAACGCACCAACC +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGSPGSR*CYNAPT
Trigger: GGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGGACT...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTGCCATTGTTCTTCTTaGAGCGCTCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWCHCSS*SARPAP
Trigger: CGGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCA...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGAACAGAAGGTGGGTTaGCCAAAGAAGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGREQKVG*PKKVAI
Trigger: TATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTC...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCGATATAGTCAGGGGTaGCGCAGAAGGTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTRYSQG*RRRCWP
Trigger: GGGCCAGCACCTTCTGCGGCACCCCTGACTATATCG...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGCGATATAGTCAGGGGTaGCGCAGAAGGTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVRYSQG*RRRCWP
Trigger: GGGCCAGCACCTTCTGCGGCACCCCTGACTATATCG...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTCGATATAGTCAGGGGTaGCGCAGAAGGTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGRYSQG*RRRCWP
Trigger: GGGCCAGCACCTTCTGCGGCACCCCTGACTATATCG...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCGAGATCTTGCCACTaGACTCCAGCCTGGTCAATA +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGPRSCH*TPAWSI
Trigger: TATTGACCAGGCTGGAGTGCAGTGGCAAGATCTCGG...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAACGGCACAGAAGGGCTaGTTCGCCTCGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQTAQKG*FASSSA
Trigger: GGCCGAGGACGAGGCGAACCAGCCCTTCTGTGCCGT...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGTCCACTCAGGATACATaGTCGGCTTCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRSTQDT*SASSAP
Trigger: TGGTGCAGAAGAAGCCGACCATGTATCCTGAGTGGA...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGCGGCGGTTCATCGTTaGGAACTTGGCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVAAVHR*ELGLVL
Trigger: GAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGC...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGTTCTCCCGGCATTTATaGTGCACATTCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRFSRHL*CTFMPQ
Trigger: CTGCGGCATGAATGTGCACCATAAATGCCGGGAGAA...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCCGGGAGGCTCTCTaGGTGACTTGGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTLREAL*VTWFKA
Trigger: GGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAG...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAAGCGGCCTTTGTCCTaGATGTGGTACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGKRPLS*MWYIRS
Trigger: GGACCTGATGTACCACATCCAGGACAAAGGCCGCTT...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCTCCTCATCATCACCATaGAAGGGGGACTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGSSSSP*KGDWPM
Trigger: CATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGA...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGCGTGTCCACACGGATaGACTCGAAGAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGACPHG*TRRVHP
Trigger: AGGATGAACTCTTCGAGTCCATCCGTGTGGACACGC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGCCAGCGGGGATAATGTaGCGTGTCCACACGGATGGA +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWPAGIM*RVHTDG
Trigger: TCCATCCGTGTGGACACGCCACATTATCCCCGCTGG...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTTAGCACAATCTGGATaGCGCGCCCCTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGLAQSG*RAPHRC
Trigger: ACATCTATGAGGGGCGCGTCATCCAGATTGTGCTAA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGGGATTTTGGCCTGTTTaGTGGCTCCGCGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTGFWPV*WLRGGS
Trigger: TGAACCGCCGCGGAGCCATCAAACAGGCCAAAATCC...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTGTAGCCTTGCTTGTTaGGGCCCCAGACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGCSLAC*GPRQSL
Trigger: AAGACTTTGTCTGGGGCCTCAACAAGCAAGGCTACA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGCAAAGTCGGCAATCTTaGTGTGGCCATCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWQSRQS*CGHPGP
Trigger: TGGACCGGGATGGCCACATCAAGATTGCCGACTTTG...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGCAAAGTCGGCAATCTTaGTGTGGCCATCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVQSRQS*CGHPGP
Trigger: TGGACCGGGATGGCCACATCAAGATTGCCGACTTTG...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGAGGGGGACTGGCCAATaGGCATCTCGTACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVRGTGQ*ASRTEG
Trigger: TCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCT...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGACTTCACTTTGGGCCTaGAAGGTGGCTCCAACCTCC +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWTSLWA*KVAPTS
Trigger: GGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGT...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTAGGGCAGGGCTAGCCTaGTCTGTCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGRAGLA*SVQEPQ
Trigger: TTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCT...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCGAACAGAAGGTGGGTTaGCCAAAGAAGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGEQKVG*PKKVAI
Trigger: TATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTC...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGAACAGAAGGTGGGTTaGCCAAAGAAGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGEQKVG*PKKVAI
Trigger: TATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGTATGGTGCACATTCATaGCGCAGTCTTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRYGAHS*RSLHTL
Trigger: TAAAGTGTGAAGACTGCGGCATGAATGTGCACCATA...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGCGAATATGTTCTCTTTaGACATCCCAAAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: YHESPARRQPRTLWGQGRRICSL*TSQSRQ
Trigger: TTGCCGACTTTGGGATGTGCAAAGAGAACATATTCG...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGGTGCCGCAGAAGGTaGTGGCCCGGCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDGCRRR*WPGSPR
Trigger: TCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCC...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGGGTGCCGCAGAAGGTaGTGGCCCGGCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPGCRRR*WPGSPR
Trigger: TCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCC...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGGAACGGCGCCATGGTaGGGCCTGCAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPGTAPW*GLQWGW
Trigger: CCAGCCCCACTGCAGGCCCCACCATGGCGCCGTTCC...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGCAGACATCAACACCTTaGCCTGAGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWQTSTP*PEAAGP
Trigger: TGGACCTGCAGCCTCAGGCCAAGGTGTTGATGTCTG...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTCGGCAATCTTGATGTaGCCATCCCGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVSAILM*PSRSSS
Trigger: GCTGCTGGACCGGGATGGCCACATCAAGATTGCCGA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTCCAGCGGGGATAATGTaGCGTGTCCACACGGATGGA +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGPAGIM*RVHTDG
Trigger: TCCATCCGTGTGGACACGCCACATTATCCCCGCTGG...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGTCTTGAAGAAGGGGTaGATTTTGATGTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: STMRARPDGSQGRSGGRGVLKKG*ILMFPV
Trigger: GACCGGAAACATCAAAATCCACCCCTTCTTCAAGAC...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGAGTTACTGTAGTCTCTaGGTGACTTCACTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRSYCSL*VTSLWA
Trigger: GGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACT...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGTTCTTCTCGAAACCCTaGTATATCCCAACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRFFSKP*YIPTGS
Trigger: AGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAA...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTCCTTGGACTCCTTGGTaGTCCAGCGGGGATAATGTG +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGPWTPW*SSGDNV
Trigger: CACATTATCCCCGCTGGATCACCAAGGAGTCCAAGG...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCCTTGGACTCCTTGGTaGTCCAGCGGGGATAATGTG +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTPWTPW*SSGDNV
Trigger: CACATTATCCCCGCTGGATCACCAAGGAGTCCAAGG...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTACTTCACTTTGGGCCTaGAAGGTGGCTCCAACCTCC +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGTSLWA*KVAPTS
Trigger: GGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGT...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGGGTCCATGGAGTCGATaGGGTTCTTGTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTGPWSR*GSCRCR
Trigger: CCTACAGCGACAAGAACCTCATCGACTCCATGGACC...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGGTCCATGGAGTCGATaGGGTTCTTGTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGGPWSR*GSCRCR
Trigger: CCTACAGCGACAAGAACCTCATCGACTCCATGGACC...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCCTGGCTCCCGCTGCTaGTACAACGCACCAACCACC +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRPGSRC*YNAPTT
Trigger: GGTGGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGG...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGATGGTCGGCTTCTTCTaGACCAGTGTTTTCCCACGC +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVMVGFF*TSVFPR
Trigger: GCGTGGGAAAACACTGGTGCAGAAGAAGCCGACCAT...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGGTCCCCAGAGCAGGCTaGCGCAGTGGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRVPRAG*RSGHRR
Trigger: CCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGAC...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTTGCCCTCCCAGATCTTaGCGTAGGTCCCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGCPPRS*RRSHCC
Trigger: ACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCA...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTGCCCTCCCAGATCTTaGCGTAGGTCCCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVCPPRS*RRSHCC
Trigger: ACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTGTTGCACTTGCTGCTaGCCTCCCAGATCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVCCTCC*PPRSCR
Trigger: ACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTTCCCGAAGCTGCCTTTaGCCAGGACCTTGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGSRSCL*PGPCGR
Trigger: TCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGA...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGGCTTCTCAACCATGGTaGACTCCACGTCGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTASQPW*TPRRRR
Trigger: TCGACGACGACGTGGAGTGCACCATGGTTGAGAAGC...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGAGAAAGGGATTCTCTaGGGCAAGTGTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGEKGIL*GKCQHP
Trigger: CGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTC...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGGGAGAAGCCAGCGAATaGAGACTGGTCCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTGEASE*RLVHGV
Trigger: GACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCC...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGAGAAGCCAGCGAATaGAGACTGGTCCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGGEASE*RLVHGV
Trigger: GACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCC...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCAGACATCAACACCTTaGCCTGAGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTQTSTP*PEAAGP
Trigger: TGGACCTGCAGCCTCAGGCCAAGGTGTTGATGTCTG...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTCAGACATCAACACCTTaGCCTGAGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGQTSTP*PEAAGP
Trigger: TGGACCTGCAGCCTCAGGCCAAGGTGTTGATGTCTG...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGTCATCGTTGGGAACTTaGCCTCGTCCTCACTGCGCA +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTSSLGT*PRPHCA
Trigger: TGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGA...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGCGGCGGTTCATCGTTaGGAACTTGGCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQAAVHR*ELGLVL
Trigger: GAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGC...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGGCTCTCTGGGTGACTTaGTTCAAGGCCTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVALWVT*FKASAK
Trigger: TTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGC...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAACTCCGGGAGGCTCTCTaGGTGACTTGGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQLREAL*VTWFKA
Trigger: GGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAG...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGAGGTGGTCCTTGGTCTaGAAGGTGCAGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTRWSLV*KVQMRW
Trigger: CCACCTCATCTGCACCTTCCAGACCAAGGACCACCT...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTCCATGGAAGGGGGACTaGCCAATGAGCATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGPWKGD*PMSISY
Trigger: GTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGG...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCCATGGAAGGGGGACTaGCCAATGAGCATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTPWKGD*PMSISY
Trigger: GTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGG...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTCCTCATCATCACCATaGAAGGGGGACTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVSSSSP*KGDWPM
Trigger: CATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGA...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGGCGTGTCCACACGGATaGACTCGAAGAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVACPHG*TRRVHP
Trigger: AGGATGAACTCTTCGAGTCCATCCGTGTGGACACGC...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGGCGTGTCCACACGGATaGACTCGAAGAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWACPHG*TRRVHP
Trigger: AGGATGAACTCTTCGAGTCCATCCGTGTGGACACGC...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGCGTGTCCACACGGATaGACTCGAAGAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWACPHG*TRRVHP
Trigger: AGGATGAACTCTTCGAGTCCATCCGTGTGGACACGC...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGTTACTGTAGTCTCTaGGTGACTTCACTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGSYCSL*VTSLWA
Trigger: GGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACT...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTCCAGCGAATGCAGACTaGTCCATGGAGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGPANAD*SMESMR
Trigger: CCTCATCGACTCCATGGACCAGTCTGCATTCGCTGG...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACGGAACGGCGCCATGGTaGGGCCTGCAGTGGGGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYGTAPW*GLQWGS
Trigger: GGAGCCCCACTGCAGGCCCCACCATGGCGCCGTTCC...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394729.6
CDS-3UTR TCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGTTAGCACAATCTGGATaGCGCGCCCCTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWLAQSG*RAPHRC
Trigger: ACATCTATGAGGGGCGCGTCATCCAGATTGTGCTAA...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTTCTTCTCGAAACCCTaGTATATCCCAACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGFFSKP*YIPTGS
Trigger: AGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGAGAAGGGGTGGATTTTaGTGTTTCCGGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVRRGGF*CFRSLP
Trigger: TGGGAGTGACCGGAAACATCAAAATCCACCCCTTCT...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCGGGGGTATCACAGGCTaGGGGTCACGTGCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAGGITG*GSRASS
Trigger: GGAGCTGGCACGTGACCCTCAGCCTGTGATACCCCC...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCTGCAGACCTCCCGTTaGAGGGGCAGGCGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYLQTSR*RGRRQG
Trigger: CCCTTGGCGCCTGCCCCTGCAACGGGAGGTCTGCAG...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGATGGTCGGCTTCTTCTaGACCAGTGTTTTCCCACGC +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTMVGFF*TSVFPR
Trigger: GCGTGGGAAAACACTGGTGCAGAAGAAGCCGACCAT...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGGCCAGAACTCAGCCTTaGCATTGTTCTTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWARTQP*HCSSCS
Trigger: GCTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGC...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGTCCCGGCATTTATGGTaGACATTCATGCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWSRHLW*TFMPQS
Trigger: AGACTGCGGCATGAATGTGCACCATAAATGCCGGGA...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGCGAATATGTTCTCTTTaGACATCCCAAAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRRICSL*TSQSRQ
Trigger: TTGCCGACTTTGGGATGTGCAAAGAGAACATATTCG...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACGTCGCTCGGGAGATGTaGGCTACAGCCGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYVAREM*ATAASG
Trigger: GCCCGAGGCGGCTGTAGCCCACATCTCCCGAGCGAC...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000652449.1
CDS-3UTR CCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACGGCCTGCAGTGGGGCTaGGGCTCCCAGCTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYGLQWG*GSQLLL
Trigger: AAGCAGGAGCTGGGAGCCCCAGCCCCACTGCAGGCC...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330452.8
CDS-3UTR CCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAGGAACGGCGCCATGGTaGGGCCTGCAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVGTAPW*GLQWGW
Trigger: CCAGCCCCACTGCAGGCCCCACCATGGCGCCGTTCC...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTCCACTCAGGATACATaGTCGGCTTCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWSTQDT*SASSAP
Trigger: TGGTGCAGAAGAAGCCGACCATGTATCCTGAGTGGA...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGGCGGCGGTTCATCGTTaGGAACTTGGCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRAAVHR*ELGLVL
Trigger: GAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGC...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTTGAAGCGTTCTTTCTaGAATATAGTGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QRKYHESPARRQPRTLWGLKRSF*NIVSRL
Trigger: CAGCCGGGACACTATATTCCAGAAAGAACGCTTCAA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTCAGCCAAAAGCTTCTaGTTGATGCCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWSAKSF*LMPQRL
Trigger: CAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGA...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTCAGCCAAAAGCTTCTaGTTGATGCCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVSAKSF*LMPQRL
Trigger: CAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGA...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGCTCTCTGGGTGACTTaGTTCAAGGCCTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVALWVT*FKASAK
Trigger: TTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGC...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGCAGCGGCATAAAACGTaGCACGGTAGAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWQRHKT*HGRVQS
Trigger: GCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTG...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTTTTGGGCCTGAAAGGTaGCTCCAACCTCCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGFGPER*LQPPLF
Trigger: GAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAA...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCCAGCTCATAGGAGTTaGAGGCGATGCGCAGGAACG +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRPAHRS*RRCAGT
Trigger: CGTTCCTGCGCATCGCCTTCAACTCCTATGAGCTGG...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTTTAGCACAATCTGGATaGCGCGCCCCTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGLAQSG*RAPHRC
Trigger: ACATCTATGAGGGGCGCGTCATCCAGATTGTGCTAA...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTTAGCACAATCTGGATaGCGCGCCCCTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVLAQSG*RAPHRC
Trigger: ACATCTATGAGGGGCGCGTCATCCAGATTGTGCTAA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTTGTAGCCTTGCTTGTTaGGGCCCCAGACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGCSLAC*GPRQSL
Trigger: AAGACTTTGTCTGGGGCCTCAACAAGCAAGGCTACA...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAACGGGCCTGCCCCCTTaGCTGGCCAGTTCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVTGLPP*LASSLQ
Trigger: CTGCAGGGAACTGGCCAGGCAAGGGGGCAGGCCCGT...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGAGAAAGGGATTCTCTaGGGCAAGTGTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQEKGIL*GKCQHP
Trigger: CGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTC...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGCAATCTTCCAGGAGGTaGTCGAATTTGGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVQSSRR*SNLGFT
Trigger: TGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTG...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CACTCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTCCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: HSQPLGWFPFKELLQDVLPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...AAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCCGGGAGGTAGAGGTTaGAGTGAGCCGAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRPGGRG*SEPRSC
Trigger: GCAAGATCTCGGCTCACTGCAACCTCTACCTCCCGG...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTTCCACTCAGGATACATaGTCGGCTTCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGSTQDT*SASSAP
Trigger: TGGTGCAGAAGAAGCCGACCATGTATCCTGAGTGGA...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGCATTTCTTGTGGATaGCAGCGTTACATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVCISCG*QRYIAC
Trigger: GCAGGCAATGTAACGCTGCCATCCACAAGAAATGCA...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTTCTCCCGGCATTTATaGTGCACATTCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVFSRHL*CTFMPQ
Trigger: CTGCGGCATGAATGTGCACCATAAATGCCGGGAGAA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGAAGGTGCAGATGAGGTaGGTGAGAAAGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVKVQMR*VRKGFS
Trigger: AGAGAATCCCTTTCTCACCCACCTCATCTGCACCTT...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTCAGCGGCATAAAACGTaGCACGGTAGAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGQRHKT*HGRVQS
Trigger: GCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTG...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGAGTTACTGTAGTCTCTaGGTGACTTCACTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWSYCSL*VTSLWA
Trigger: GGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACT...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGGAGGTGCTCGAATTTaGGGTTCACAAAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGGGARI*GSQRRS
Trigger: GCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCC...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGAGGTGCTCGAATTTaGGGTTCACAAAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVGGARI*GSQRRS
Trigger: GCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCC...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGTGGTGGGGCCTGCAGTaGGGCTCCCGTTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEWWGLQ*GSRCRG
Trigger: GCCCCTGCAACGGGAGCCCCACTGCAGGCCCCACCA...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394729.6
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCCTGCAGTGGGGCTaGGAGGCTGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDGLQWG*EAEAEE
Trigger: TTCTTCTGCCTCAGCCTCCCAGCCCCACTGCAGGCC...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650739.1
ENST00000652449.1
3UTR CAA 72 bp CACTCCACGTCGTCGTCGATCAGGACCACATCCTTCTaGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: HSTSSSIRTTSF*RALMAKYSPLP
Trigger: GGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGATCGACGACGACGTGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGCGGCATGTCGATGTTaGAGCGTTCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVAACRC*SVLSGI
Trigger: TATTCCAGAAAGAACGCTTCAACATCGACATGCCGC...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAATGTAGTTGTGAACCTTaGAGCGGTGCGGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQCSCEP*SGAACR
Trigger: TCGACATGCCGCACCGCTTCAAGGTTCACAACTACA...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTTCTTCTCGAAACCCTaGTATATCCCAACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWFFSKP*YIPTGS
Trigger: AGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAA...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CTTGTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTAGGGGGACTGGCCAATaGGCATCTCGTACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: LVAVGEARLLVQELLVKVRGTGQ*ASRTEG
Trigger: TCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCT...AACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGACAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp GTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTACTGGTCCATGGAGTCGATaGGGTTCTTGTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VAVGEARLLVQELLVKVTGPWSR*GSCRCR
Trigger: CCTACAGCGACAAGAACCTCATCGACTCCATGGACC...AGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp CTTGTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTTGCCCTCCCAGATCTTaGCGTAGGTCCCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVAVGEARLLVQELLVKVCPPRS*RRSHCC
Trigger: ACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCA...AACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTCCCGAAGCTGCCTTTaGCCAGGACCTTGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRSRSCL*PGPCGR
Trigger: TCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGGCTTCTCAACCATGGTaGACTCCACGTCGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRASQPW*TPRRRR
Trigger: TCGACGACGACGTGGAGTGCACCATGGTTGAGAAGC...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCGGGTGCCGCAGAAGGTaGTGGCCCGGCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFGCRRR*WPGSPR
Trigger: TCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCC...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCACGATATAGTCAGGGGTaGCGCAGAAGGTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPRYSQG*RRRCWP
Trigger: GGGCCAGCACCTTCTGCGGCACCCCTGACTATATCG...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACGCAGGAACGGCGCCATaGTGGGGCCTGCAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHAGTAP*WGLQWG
Trigger: GCCCCACTGCAGGCCCCACCATGGCGCCGTTCCTGC...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTCATCGTTGGGAACTTaGCCTCGTCCTCACTGCGCA +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRSSLGT*PRPHCA
Trigger: TGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCACTCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTGCGGCGGTTCATCGTTaGGAACTTGGCCTCGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLPASWLVPFQRASPGCPAAVHR*ELGLVL
Trigger: GAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGC...AGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTTGCATTTCTTGTGGATaGCAGCGTTACATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGCISCG*QRYIAC
Trigger: GCAGGCAATGTAACGCTGCCATCCACAAGAAATGCA...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTCGATGCATTTCTTGTaGATGGCAGCGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVSMHFL*MAALHC
Trigger: GCAATGTAACGCTGCCATCCACAAGAAATGCATCGA...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGTCGATGCATTTCTTGTaGATGGCAGCGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWSMHFL*MAALHC
Trigger: GCAATGTAACGCTGCCATCCACAAGAAATGCATCGA...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCACTCCGGGAGGCTCTCTaGGTGACTTGGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPLREAL*VTWFKA
Trigger: GGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAG...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCCTCCGGGAGGCTCTCTaGGTGACTTGGTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPALREAL*VTWFKA
Trigger: GGCCTTGAACCAAGTCACCCAGAGAGCCTCCCGGAG...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTTGCCCAGGACCTTGTaGAAGATGAAGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVLPRTL*KMKLLM
Trigger: CATCAACAACTTCATCTTCCACAAGGTCCTGGGCAA...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTTGCCCAGGACCTTGTaGAAGATGAAGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWLPRTL*KMKLLM
Trigger: CATCAACAACTTCATCTTCCACAAGGTCCTGGGCAA...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGAAGGTGCAGATGAGGTaGGTGAGAAAGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVKVQMR*VRKGFS
Trigger: AGAGAATCCCTTTCTCACCCACCTCATCTGCACCTT...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGAAGGTGCAGATGAGGTaGGTGAGAAAGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTKVQMR*VRKGFS
Trigger: AGAGAATCCCTTTCTCACCCACCTCATCTGCACCTT...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp ATCAGGACCACATCCTTCTTGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCCTCGGCAATCTTGATGTaGCCATCCCGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IRTTSFLRALMAKYSPLPSAILM*PSRSSS
Trigger: GCTGCTGGACCGGGATGGCCACATCAAGATTGCCGA...GGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAATCCTCATCATCACCATaGAAGGGGGACTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQSSSSP*KGDWPM
Trigger: CATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGA...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGCGTGTCCACACGGATaGACTCGAAGAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQACPHG*TRRVHP
Trigger: AGGATGAACTCTTCGAGTCCATCCGTGTGGACACGC...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp ACTGTTGTCTTGCATGTCCTCCCCAGCAACTCCGGTCTTCTTCTCGAAACCCTGCCAGCGGGGATAATGTaGCGTGTCCACACGGATGGA +
Preference number: 4 (lower is better)
Translates to: TVVLHVLPSNSGLLLETLPAGIM*RVHTDG
Trigger: TCCATCCGTGTGGACACGCCACATTATCCCCGCTGG...CAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTTCCCAGCCTCTTGGTTaGTTCCCTTTCAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGSQPLG*FPFKEL
Trigger: AAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTCACTCCCAGCCTCTTaGTTGGTTCCCTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVSLPAS*LVPFQR
Trigger: TCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGTCTTGAAGAAGGGGTaGATTTTGATGTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: SQRKYHESPARRQPRTLWVLKKG*ILMFPV
Trigger: GACCGGAAACATCAAAATCCACCCCTTCTTCAAGAC...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCCCAGCGAATGCAGACTaGTCCATGGAGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVPANAD*SMESMR
Trigger: CCTCATCGACTCCATGGACCAGTCTGCATTCGCTGG...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCTTCTGGAACTGGAGGTaGGGGTATCACAGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVFWNWR*GYHRLR
Trigger: CCTCAGCCTGTGATACCCCCACCTCCAGTTCCAGAA...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTGTAGTTGTGAACCTTaGAGCGGTGCGGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRCSCEP*SGAACR
Trigger: TCGACATGCCGCACCGCTTCAAGGTTCACAACTACA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAAGAAGGGGTGGATTTTaGTGTTTCCGGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQRRGGF*CFRSLP
Trigger: TGGGAGTGACCGGAAACATCAAAATCCACCCCTTCT...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACAGGGCAGGGCTAGCCTaGTCTGTCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDRAGLA*SVQEPQ
Trigger: TTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCT...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARTEEVP*EPGQTA
Trigger: TGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGT...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTCAGGAGAAACGGGCCTaGCCCCTTGCCTGGCCAGTT +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSQEKRA*PLAWPV
Trigger: AACTGGCCAGGCAAGGGGGCAGGCCCGTTTCTCCTG...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAAGTCCTGGCTCCCGCTaGTGCTACAACGCACCAACC +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARSPGSR*CYNAPT
Trigger: GGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGGACT...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTCAGCGTTACATTGCCTaGATTTGTAGCCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGQRYIA*ICSLAC
Trigger: ACAAGCAAGGCTACAAATGCAGGCAATGTAACGCTG...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTATGGTGCACATTCATaGCGCAGTCTTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVYGAHS*RSLHTL
Trigger: TAAAGTGTGAAGACTGCGGCATGAATGTGCACCATA...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp ATCAGGACCACATCCTTCTTGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCCGCTTCTCAACCATGGTaGACTCCACGTCGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: IRTTSFLRALMAKYSPLPASQPW*TPRRRR
Trigger: TCGACGACGACGTGGAGTGCACCATGGTTGAGAAGC...GGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTCCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCGCCATGGTGGGGCCTaGAGTGGGGCTCCCGTTGCA +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHRHGGA*SGAPVA
Trigger: TGCAACGGGAGCCCCACTGCAGGCCCCACCATGGCG...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394729.6
CDS-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACGTCGCTCGGGAGATGTaGGCTACAGCCGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHVAREM*ATAASG
Trigger: GCCCGAGGCGGCTGTAGCCCACATCTCCCGAGCGAC...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000652449.1
CDS-3UTR CCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGCCTGCCCCCTTGCCTaGCCAGTTCCCTGCAGACCT +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEACPLA*PVPCRP
Trigger: AGGTCTGCAGGGAACTGGCCAGGCAAGGGGGCAGGC...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR CCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGACGGCACAGAAGGGCTaGTTCGCCTCGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTETAQKG*FASSSA
Trigger: GGCCGAGGACGAGGCGAACCAGCCCTTCTGTGCCGT...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGTTGAAGCGTTCTTTCTaGAATATAGTGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTLKRSF*NIVSRL
Trigger: CAGCCGGGACACTATATTCCAGAAAGAACGCTTCAA...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGGCTCTCTGGGTGACTTaGTTCAAGGCCTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRALWVT*FKASAK
Trigger: TTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGC...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTTGCCCAGGACCTTGTaGAAGATGAAGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVLPRTL*KMKLLM
Trigger: CATCAACAACTTCATCTTCCACAAGGTCCTGGGCAA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTTTGCCCAGGACCTTGTaGAAGATGAAGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGLPRTL*KMKLLM
Trigger: CATCAACAACTTCATCTTCCACAAGGTCCTGGGCAA...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCAAGCGGCCTTTGTCCTaGATGTGGTACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVKRPLS*MWYIRS
Trigger: GGACCTGATGTACCACATCCAGGACAAAGGCCGCTT...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGAAGCGGCCTTTGTCCTaGATGTGGTACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRKRPLS*MWYIRS
Trigger: GGACCTGATGTACCACATCCAGGACAAAGGCCGCTT...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTCGGCAATCTTGATGTaGCCATCCCGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDSAILM*PSRSSS
Trigger: GCTGCTGGACCGGGATGGCCACATCAAGATTGCCGA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCTCGGCAATCTTGATGTaGCCATCCCGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPASAILM*PSRSSS
Trigger: GCTGCTGGACCGGGATGGCCACATCAAGATTGCCGA...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCTCCTCATCATCACCATaGAAGGGGGACTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVSSSSP*KGDWPM
Trigger: CATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGA...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGTCTTGAAGAAGGGGTaGATTTTGATGTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVVLKKG*ILMFPV
Trigger: GACCGGAAACATCAAAATCCACCCCTTCTTCAAGAC...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTTTGGGCCTGAAAGGTaGCTCCAACCTCCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRFGPER*LQPPLF
Trigger: GAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAATCAACACCTTGGCCTaGGGCTGCAGGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVINTLA*GCRSSQ
Trigger: CTGGCTGGACCTGCAGCCTCAGGCCAAGGTGTTGAT...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGCGGCATGTCGATGTTaGAGCGTTCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQAACRC*SVLSGI
Trigger: TATTCCAGAAAGAACGCTTCAACATCGACATGCCGC...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTGGGAGGCTCTCTGGGTaGCTTGGTTCAAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSGRLSG*LGSRPQ
Trigger: CTGAGGCCTTGAACCAAGTCACCCAGAGAGCCTCCC...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACAGGGGGACTGGCCAATaGGCATCTCGTACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDRGTGQ*ASRTEG
Trigger: TCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCT...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSTEEVP*EPGQTA
Trigger: TGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGT...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRTEEVP*EPGQTA
Trigger: TGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGT...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATGCCATTGTTCTTCTTaGAGCGCTCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARCHCSS*SARPAP
Trigger: CGGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGTCCCCAGAGCAGGCTaGCGCAGTGGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEVPRAG*RSGHRR
Trigger: CCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGAC...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGTATGGTGCACATTCATaGCGCAGTCTTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: HSSQRKYHESPARRQPRTYGAHS*RSLHTL
Trigger: TAAAGTGTGAAGACTGCGGCATGAATGTGCACCATA...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTGGATCCCGAAGCTGCCTTTaGCCAGGACCTTGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: SQPLGWFPFKELLQDVLGSRSCL*PGPCGR
Trigger: TCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGA...TCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAACAATCTTCCAGGAGGTaGTCGAATTTGGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQQSSRR*SNLGFT
Trigger: TGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTG...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGCCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAACGGCACAGAAGGGCTaGTTCGCCTCGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRTAQKG*FASSSA
Trigger: GGCCGAGGACGAGGCGAACCAGCCCTTCTGTGCCGT...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTACGGCACAGAAGGGCTaGTTCGCCTCGTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVTAQKG*FASSSA
Trigger: GGCCGAGGACGAGGCGAACCAGCCCTTCTGTGCCGT...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTCCACTCAGGATACATaGTCGGCTTCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRSTQDT*SASSAP
Trigger: TGGTGCAGAAGAAGCCGACCATGTATCCTGAGTGGA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTCATCGTTGGGAACTTaGCCTCGTCCTCACTGCGCA +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDSSLGT*PRPHCA
Trigger: TGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTACTTTCTCCCGGCATTTATaGTGCACATTCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: VAVGEARLLVQELLVKVTFSRHL*CTFMPQ
Trigger: CTGCGGCATGAATGTGCACCATAAATGCCGGGAGAA...AGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAAGGTGGTCCTTGGTCTaGAAGGTGCAGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPRWSLV*KVQMRW
Trigger: CCACCTCATCTGCACCTTCCAGACCAAGGACCACCT...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCGGCATAAAACGTaGCACGGTAGAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRQRHKT*HGRVQS
Trigger: GCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTG...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCCCATGGAAGGGGGACTaGCCAATGAGCATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAPWKGD*PMSISY
Trigger: GTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGG...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGCAGGGCTAGCCTGATCTGTCCAGGAACCTCAATCTTCCAGGAGGTGCTCGAATCCCAGCCTCTTGGTTaGTTCCCTTTCAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GRASLICPGTSIFQEVLESQPLG*FPFKEL
Trigger: AAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA...TTCGAGCACCTCCTGGAAGATTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAATCCCAGCCTCTTGGTTaGTTCCCTTTCAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQSQPLG*FPFKEL
Trigger: AAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
3UTR CAA 72 bp CTGCCTTTGCCCAGGACCTTGTGGAAGATGAAGTTGTaGATGTTGCACTTGCTGCTGCCCTCCCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: LPLPRTLWKMKL*MLHLLLPSQIL
Trigger: CAAGATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAACTTCATCTTCCACAAGGTCCTGGGCAAAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CAA 72 bp GTCCAGGAACCTCAATCTTCCAGGAGGTGCTCGAATTaGGGGTTCACAAAGGAGAAGCCAGCGAATGCAGAC +
Preference number: 4 (lower is better)
Translates to: VQEPQSSRRCSN*GFTKEKPANAD
Trigger: GTCTGCATTCGCTGGCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTGAGGTTCCTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGATCAACACCTTGGCCTaGGGCTGCAGGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEINTLA*GCRSSQ
Trigger: CTGGCTGGACCTGCAGCCTCAGGCCAAGGTGTTGAT...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR TCA 90 bp ACTGTTGTCTTGCATGTCCTCCCCAGCAACTCCGGTCTTCTTCTCGAAACCCTGTGTAGCCTTGCTTGTTaGGGCCCCAGACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TVVLHVLPSNSGLLLETLCSLAC*GPRQSL
Trigger: AAGACTTTGTCTGGGGCCTCAACAAGCAAGGCTACA...CAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATGTAGTTGTGAACCTTaGAGCGGTGCGGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPCSCEP*SGAACR
Trigger: TCGACATGCCGCACCGCTTCAAGGTTCACAACTACA...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAATTCTTCTCGAAACCCTaGTATATCCCAACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQFFSKP*YIPTGS
Trigger: AGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAA...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAGGGCAGGGCTAGCCTaGTCTGTCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSRAGLA*SVQEPQ
Trigger: TTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCT...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp ACTGTTGTCTTGCATGTCCTCCCCAGCAACTCCGGTCTTCTTCTCGAAACCCTGGCGGCATGTCGATGTTaGAGCGTTCTTTCTGGAACT +
Preference number: 4 (lower is better)
Translates to: TVVLHVLPSNSGLLLETLAACRC*SVLSGT
Trigger: AGTTCCAGAAAGAACGCTTCAACATCGACATGCCGC...CAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATGGTCGGCTTCTTCTaGACCAGTGTTTTCCCACGC +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAMVGFF*TSVFPR
Trigger: GCGTGGGAAAACACTGGTGCAGAAGAAGCCGACCAT...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAACAGCGTTACATTGCCTaGATTTGTAGCCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQQRYIA*ICSLAC
Trigger: ACAAGCAAGGCTACAAATGCAGGCAATGTAACGCTG...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCGTCCCCAGAGCAGGCTaGCGCAGTGGTCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFVPRAG*RSGHRR
Trigger: CCTTCTGTGACCACTGCGGCAGCCTGCTCTGGGGAC...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp ACTGTTGTCTTGCATGTCCTCCCCAGCAACTCCGGTCTTCTTCTCGAAACCCTGTCCCGGCATTTATGGTaGACATTCATGCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TVVLHVLPSNSGLLLETLSRHLW*TFMPQS
Trigger: AGACTGCGGCATGAATGTGCACCATAAATGCCGGGA...CAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACTGCCCTCCCAGATCTTaGCGTAGGTCCCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYCPPRS*RRSHCC
Trigger: ACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCA...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATGTTGCACTTGCTGCTaGCCTCCCAGATCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARCCTCC*PPRSCR
Trigger: ACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAGCTTCTCAACCATGGTaGACTCCACGTCGTCGTCGA +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARASQPW*TPRRRR
Trigger: TCGACGACGACGTGGAGTGCACCATGGTTGAGAAGC...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAGAGAAAGGGATTCTCTaGGGCAAGTGTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPAREKGIL*GKCQHP
Trigger: CGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTC...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp CTTGTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTCAATCTTCCAGGAGGTaGTCGAATTTGGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: LVAVGEARLLVQELLVKVQSSRR*SNLGFT
Trigger: TGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTG...AACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGACCACAGTCCCACTGGTaGTTATCGTGGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRPQSHW*LSWGAG
Trigger: GCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGG...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTGCATTTCTTGTGGATaGCAGCGTTACATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRCISCG*QRYIAC
Trigger: GCAGGCAATGTAACGCTGCCATCCACAAGAAATGCA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCGCTCTCTGGGTGACTTaGTTCAAGGCCTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAALWVT*FKASAK
Trigger: TTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGC...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAAAGCGGCCTTTGTCCTaGATGTGGTACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPKRPLS*MWYIRS
Trigger: GGACCTGATGTACCACATCCAGGACAAAGGCCGCTT...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp ATCAGGACCACATCCTTCTTGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCCCAGCGGCATAAAACGTaGCACGGTAGAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: IRTTSFLRALMAKYSPLPQRHKT*HGRVQS
Trigger: GCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTG...GGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGTCGGCAATCTTGATGTaGCCATCCCGGTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRSAILM*PSRSSS
Trigger: GCTGCTGGACCGGGATGGCCACATCAAGATTGCCGA...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGCGTGTCCACACGGATaGACTCGAAGAGTTCATCCT +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDACPHG*TRRVHP
Trigger: AGGATGAACTCTTCGAGTCCATCCGTGTGGACACGC...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCTCACTCCCAGCCTCTTaGTTGGTTCCCTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVSLPAS*LVPFQR
Trigger: TCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGA...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACTGGTGCTTATCGTaGGGAGCGGGCAGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVHWCLS*GAGRCG
Trigger: CCCACACCTGCCCGCTCCCCACGATAAGCACCAGTG...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTGGCCTGCAGTGGGGCTaGGAGGCTGAGGCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVGLQWG*EAEAEE
Trigger: TTCTTCTGCCTCAGCCTCCCAGCCCCACTGCAGGCC...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000650739.1
ENST00000652449.1
CDS-3UTR TCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACATCAACACCTTGGCCTaGGGCTGCAGGTCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHINTLA*GCRSSQ
Trigger: CTGGCTGGACCTGCAGCCTCAGGCCAAGGTGTTGAT...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGGATTTTGGCCTGTTTaGTGGCTCCGCGGCGGTTCA +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEGFWPV*WLRGGS
Trigger: TGAACCGCCGCGGAGCCATCAAACAGGCCAAAATCC...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATGTAGTTGTGAACCTTaGAGCGGTGCGGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARCSCEP*SGAACR
Trigger: TCGACATGCCGCACCGCTTCAAGGTTCACAACTACA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCGGGAGGCTCTCTGGGTaGCTTGGTTCAAGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFGRLSG*LGSRPQ
Trigger: CTGAGGCCTTGAACCAAGTCACCCAGAGAGCCTCCC...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCTTGGACTCCTTGGTaGTCCAGCGGGGATAATGTG +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVPWTPW*SSGDNV
Trigger: CACATTATCCCCGCTGGATCACCAAGGAGTCCAAGG...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGACTTCACTTTGGGCCTaGAAGGTGGCTCCAACCTCC +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRTSLWA*KVAPTS
Trigger: GGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGT...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACGGGGCTCCCAGCTCCTaGTTGTCCTTAGTCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHGAPSS*LSLVLA
Trigger: AGCCAGGACTAAGGACAAGCAGGAGCTGGGAGCCCC...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS-3UTR GCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAACAGAAGGTGGGTTaGCCAAAGAAGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPEQKVG*PKKVAI
Trigger: TATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTC...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTCACACTTTAATCCCTaGTTCACCAGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDSHFNP*FTSPQS
Trigger: GCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATCCCGGCATTTATGGTaGACATTCATGCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPSRHLW*TFMPQS
Trigger: AGACTGCGGCATGAATGTGCACCATAAATGCCGGGA...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTTGTTGCACTTGCTGCTaGCCTCCCAGATCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSCCTCC*PPRSCR
Trigger: ACGGCAAGATCTGGGAGGGCAGCAGCAAGTGCAACA...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTATCCCGAAGCTGCCTTTaGCCAGGACCTTGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVSRSCL*PGPCGR
Trigger: TCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGA...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATAGGGTGCCGCAGAAGGTaGTGGCCCGGCTCTCCCCGA +
Preference number: 4 (lower is better)
Translates to: KDQHITSPPWFFSTEQYIGCRRR*WPGSPR
Trigger: TCGGGGAGAGCCGGGCCAGCACCTTCTGCGGCACCC...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR CCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTCAGACATCAACACCTTaGCCTGAGGCTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSQTSTP*PEAAGP
Trigger: TGGACCTGCAGCCTCAGGCCAAGGTGTTGATGTCTG...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTTGAAGCGTTCTTTCTaGAATATAGTGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRLKRSF*NIVSRL
Trigger: CAGCCGGGACACTATATTCCAGAAAGAACGCTTCAA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATCAGCCAAAAGCTTCTaGTTGATGCCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPSAKSF*LMPQRL
Trigger: CAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGA...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTTGCCCAGGACCTTGTaGAAGATGAAGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: SRFTHSSQRKYHESPARRLPRTL*KMKLLM
Trigger: CATCAACAACTTCATCTTCCACAAGGTCCTGGGCAA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTACTTTGCCCAGGACCTTGTaGAAGATGAAGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: VAVGEARLLVQELLVKVTLPRTL*KMKLLM
Trigger: CATCAACAACTTCATCTTCCACAAGGTCCTGGGCAA...AGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp ACTGTTGTCTTGCATGTCCTCCCCAGCAACTCCGGTCTTCTTCTCGAAACCCTGAAGGTGCAGATGAGGTaGGTGAGAAAGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: TVVLHVLPSNSGLLLETLKVQMR*VRKGFS
Trigger: AGAGAATCCCTTTCTCACCCACCTCATCTGCACCTT...CAGGGTTTCGAGAAGAAGACCGGAGTTGCTGGGGAGGACATGCAAGACAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGGAAGGGGGACTaGCCAATGAGCATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVPWKGD*PMSISY
Trigger: GTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGG...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATTTGGGCCTGAAAGGTaGCTCCAACCTCCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARFGPER*LQPPLF
Trigger: GAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp ATCAGGACCACATCCTTCTTGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCCAGTTACTGTAGTCTCTaGGTGACTTCACTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: IRTTSFLRALMAKYSPLPSYCSL*VTSLWA
Trigger: GGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACT...GGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGAGGTGCTCGAATTTaGGGTTCACAAAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDGGARI*GSQRRS
Trigger: GCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCC...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCGTTCTTTCTGGAACTaGAGGTGGGGGTATCACAGG +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYRSFWN*RWGYHR
Trigger: CCTGTGATACCCCCACCTCCAGTTCCAGAAAGAACG...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651505.1
3UTR CAA 72 bp GGGTGGATTTTGATGTTTCCGGTCACTCCCAGCCTCTaGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATG +
Preference number: 4 (lower is better)
Translates to: GWILMFPVTPSL*VGSLSKSFSRM
Trigger: CATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGACCGGAAACATCAAAATCCACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp TCACTCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTCAGTGCATCTGCCGATaGTCTTGTCGATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: SLPASWLVPFQRASPGCPQCICR*SCRCIS
Trigger: AGAAATGCATCGACAAGATCATCGGCAGATGCACTG...AGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCGCGGCATGTCGATGTTaGAGCGTTCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAAACRC*SVLSGI
Trigger: TATTCCAGAAAGAACGCTTCAACATCGACATGCCGC...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGAGGGGGACTGGCCAATaGGCATCTCGTACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTERGTGQ*ASRTEG
Trigger: TCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCT...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGACTTCACTTTGGGCCTaGAAGGTGGCTCCAACCTCC +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTETSLWA*KVAPTS
Trigger: GGAGGTTGGAGCCACCTTTCAGGCCCAAAGTGAAGT...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGGTCCATGGAGTCGATaGGGTTCTTGTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEGPWSR*GSCRCR
Trigger: CCTACAGCGACAAGAACCTCATCGACTCCATGGACC...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAAGGGCAGGGCTAGCCTaGTCTGTCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRRAGLA*SVQEPQ
Trigger: TTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCT...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGGGCAGGGCTAGCCTaGTCTGTCCAGGAACCTCAA +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHRAGLA*SVQEPQ
Trigger: TTGAGGTTCCTGGACAGATCAGGCTAGCCCTGCCCT...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTGCCATTGTTCTTCTTaGAGCGCTCGGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFCHCSS*SARPAP
Trigger: CGGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCA...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR GCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACTCACACTTTAATCCCTaGTTCACCAGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYSHFNP*FTSPQS
Trigger: GCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGA...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATCACACTTTAATCCCTaGTTCACCAGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARSHFNP*FTSPQS
Trigger: GCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGTCCCGAAGCTGCCTTTaGCCAGGACCTTGTGGAAGA +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTESRSCL*PGPCGR
Trigger: TCTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGA...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GGCCTGAAAGGTGGCTCCAACCTCCGCTTTTCCAGCAGAGTCCAGTTTATGGTCCGAATATGTTCTCTTTaGACATCCCAAAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: GLKGGSNLRFSSRVQFMVRICSL*TSQSRQ
Trigger: TTGCCGACTTTGGGATGTGCAAAGAGAACATATTCG...GACCATAAACTGGACTCTGCTGGAAAAGCGGAGGTTGGAGCCACCTTTCAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCCGGGAGGTAGAGGTTaGAGTGAGCCGAGATCTTGC +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFPGGRG*SEPRSC
Trigger: GCAAGATCTCGGCTCACTGCAACCTCTACCTCCCGG...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650739.1
ENST00000652449.1
CDS-3UTR GCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGCCGAGATCTTGCCACTaGACTCCAGCCTGGTCAATA +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRPRSCH*TPAWSI
Trigger: TATTGACCAGGCTGGAGTGCAGTGGCAAGATCTCGG...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATCCACTCAGGATACATaGTCGGCTTCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARSTQDT*SASSAP
Trigger: TGGTGCAGAAGAAGCCGACCATGTATCCTGAGTGGA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATGCATTTCTTGTGGATaGCAGCGTTACATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPCISCG*QRYIAC
Trigger: GCAGGCAATGTAACGCTGCCATCCACAAGAAATGCA...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTGCATTTCTTGTGGATaGCAGCGTTACATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDCISCG*QRYIAC
Trigger: GCAGGCAATGTAACGCTGCCATCCACAAGAAATGCA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp ATCAGGACCACATCCTTCTTGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCCTCGATGCATTTCTTGTaGATGGCAGCGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: IRTTSFLRALMAKYSPLPSMHFL*MAALHC
Trigger: GCAATGTAACGCTGCCATCCACAAGAAATGCATCGA...GGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATTCTCCCGGCATTTATaGTGCACATTCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARFSRHL*CTFMPQ
Trigger: CTGCGGCATGAATGTGCACCATAAATGCCGGGAGAA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACTCAGCCAAAAGCTTCTaGTTGATGCCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYSAKSF*LMPQRL
Trigger: CAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGA...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTGCTCTCTGGGTGACTTaGTTCAAGGCCTCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSALWVT*FKASAK
Trigger: TTTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGC...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAAGGTGCAGATGAGGTaGGTGAGAAAGGGATTCTCT +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAKVQMR*VRKGFS
Trigger: AGAGAATCCCTTTCTCACCCACCTCATCTGCACCTT...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTTCCTCATCATCACCATaGAAGGGGGACTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSSSSSP*KGDWPM
Trigger: CATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGA...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATCACTCCCAGCCTCTTaGTTGGTTCCCTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPSLPAS*LVPFQR
Trigger: TCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGA...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACTCACCACAGTCCCACTaGTGCTTATCGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHSPQSH*CLSWGA
Trigger: CGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGA...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTGCTCTCCCCCAACCCTaGGCACAACAACATCCCAAG +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVALPQP*AQQHPK
Trigger: CTTGGGATGTTGTTGTGCCCAGGGTTGGGGGAGAGC...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTTGAAGCGTTCTTTCTaGAACTGGAGGTGGGGGTAT +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDLKRSF*NWRWGY
Trigger: ATACCCCCACCTCCAGTTCCAGAAAGAACGCTTCAA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR TCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATTCTTCTCGAAACCCTaGTATATCCCAACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPFFSKP*YIPTGS
Trigger: AGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAA...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR TCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAAAGTCGGCAATCTTaGTGTGGCCATCCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVQSRQS*CGHPGP
Trigger: TGGACCGGGATGGCCACATCAAGATTGCCGACTTTG...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAGGGGGACTGGCCAATaGGCATCTCGTACAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFRGTGQ*ASRTEG
Trigger: TCCTTCTGTACGAGATGCTCATTGGCCAGTCCCCCT...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCTTGGACTCCTTGGTaGTCCAGCGGGGATAATGTG +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVPWTPW*SSGDNV
Trigger: CACATTATCCCCGCTGGATCACCAAGGAGTCCAAGG...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGACCTTGGACTCCTTGGTaGTCCAGCGGGGATAATGTG +
Preference number: 4 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRPWTPW*SSGDNV
Trigger: CACATTATCCCCGCTGGATCACCAAGGAGTCCAAGG...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAGAAGGGGTGGATTTTaGTGTTTCCGGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRRRGGF*CFRSLP
Trigger: TGGGAGTGACCGGAAACATCAAAATCCACCCCTTCT...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAGGTCCATGGAGTCGATaGGGTTCTTGTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSGPWSR*GSCRCR
Trigger: CCTACAGCGACAAGAACCTCATCGACTCCATGGACC...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCCAGCGTTACATTGCCTaGATTTGTAGCCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAQRYIA*ICSLAC
Trigger: ACAAGCAAGGCTACAAATGCAGGCAATGTAACGCTG...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCACAGCGTTACATTGCCTaGATTTGTAGCCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: GKADSHTVHRGSTMRARPQRYIA*ICSLAC
Trigger: ACAAGCAAGGCTACAAATGCAGGCAATGTAACGCTG...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR GCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTTCACACTTTAATCCCTaGTTCACCAGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSSHFNP*FTSPQS
Trigger: GCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGA...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGTCCCGGCATTTATGGTaGACATTCATGCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRSRHLW*TFMPQS
Trigger: AGACTGCGGCATGAATGTGCACCATAAATGCCGGGA...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACGAGAAAGGGATTCTCTaGGGCAAGTGTCAGCACCCG +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHEKGIL*GKCQHP
Trigger: CGGGTGCTGACACTTGCCGCAGAGAATCCCTTTCTC...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAGGAGAAGCCAGCGAATaGAGACTGGTCCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSGEASE*RLVHGV
Trigger: GACTCCATGGACCAGTCTGCATTCGCTGGCTTCTCC...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACAATCTTCCAGGAGGTaGTCGAATTTGGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARQSSRR*SNLGFT
Trigger: TGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTG...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACTCATCGTTGGGAACTTaGCCTCGTCCTCACTGCGCA +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHSSLGT*PRPHCA
Trigger: TGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGA...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTCATCGTTGGGAACTTaGCCTCGTCCTCACTGCGCA +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFSSLGT*PRPHCA
Trigger: TGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGA...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCTCGATGCATTTCTTGTaGATGGCAGCGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: RKSRFTHSSQRKYHESPASMHFL*MAALHC
Trigger: GCAATGTAACGCTGCCATCCACAAGAAATGCATCGA...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTTGAAGCGTTCTTTCTaGAATATAGTGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDLKRSF*NIVSRL
Trigger: CAGCCGGGACACTATATTCCAGAAAGAACGCTTCAA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAAGGTGGTCCTTGGTCTaGAAGGTGCAGATGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSRWSLV*KVQMRW
Trigger: CCACCTCATCTGCACCTTCCAGACCAAGGACCACCT...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCATGGAAGGGGGACTaGCCAATGAGCATCTCGTAC +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSPWKGD*PMSISY
Trigger: GTACGAGATGCTCATTGGCCAGTCCCCCTTCCATGG...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATCCCAGCCTCTTGGTTaGTTCCCTTTCAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARSQPLG*FPFKEL
Trigger: AAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGTCTTGAAGAAGGGGTaGATTTTGATGTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDVLKKG*ILMFPV
Trigger: GACCGGAAACATCAAAATCCACCCCTTCTTCAAGAC...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCCAGCGAATGCAGACTaGTCCATGGAGTCGATGAGG +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFPANAD*SMESMR
Trigger: CCTCATCGACTCCATGGACCAGTCTGCATTCGCTGG...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGCAGTGCATCTGCCGATaGTCTTGTCGATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRQCICR*SCRCIS
Trigger: AGAAATGCATCGACAAGATCATCGGCAGATGCACTG...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTCAGTGCATCTGCCGATaGTCTTGTCGATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSQCICR*SCRCIS
Trigger: AGAAATGCATCGACAAGATCATCGGCAGATGCACTG...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAGCGGCATGTCGATGTTaGAGCGTTCTTTCTGGAATA +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVAACRC*SVLSGI
Trigger: TATTCCAGAAAGAACGCTTCAACATCGACATGCCGC...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR TCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCATGTAGTTGTGAACCTTaGAGCGGTGCGGCATGTCGA +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSCSCEP*SGAACR
Trigger: TCGACATGCCGCACCGCTTCAAGGTTCACAACTACA...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAATGGTCGGCTTCTTCTaGACCAGTGTTTTCCCACGC +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSMVGFF*TSVFPR
Trigger: GCGTGGGAAAACACTGGTGCAGAAGAAGCCGACCAT...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR GCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAACAGAAGGTGGGTTaGCCAAAGAAGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEEQKVG*PKKVAI
Trigger: TATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTC...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp TCACTCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTATGGTGCACATTCATaGCGCAGTCTTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: SLPASWLVPFQRASPGCPYGAHS*RSLHTL
Trigger: TAAAGTGTGAAGACTGCGGCATGAATGTGCACCATA...AGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR GCA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTATGGTGCACATTCATaGCGCAGTCTTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: KADSHTVHRGSTMRARPDYGAHS*RSLHTL
Trigger: TAAAGTGTGAAGACTGCGGCATGAATGTGCACCATA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATTGAAGCGTTCTTTCTaGAATATAGTGTCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARLKRSF*NIVSRL
Trigger: CAGCCGGGACACTATATTCCAGAAAGAACGCTTCAA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAAGCGGCCTTTGTCCTaGATGTGGTACATCAGGTCC +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHKRPLS*MWYIRS
Trigger: GGACCTGATGTACCACATCCAGGACAAAGGCCGCTT...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTTCCTCATCATCACCATaGAAGGGGGACTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVSSSSP*KGDWPM
Trigger: CATTGGCCAGTCCCCCTTCCATGGTGATGATGAGGA...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTATCCCAGCCTCTTGGTTaGTTCCCTTTCAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVSQPLG*FPFKEL
Trigger: AAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCATTTGGGCCTGAAAGGTaGCTCCAACCTCCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSFGPER*LQPPLF
Trigger: GAAAAGCGGAGGTTGGAGCCACCTTTCAGGCCCAAA...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGGAGGTGCTCGAATTTaGGGTTCACAAAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEGGARI*GSQRRS
Trigger: GCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCC...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAATCACCAGTCCCCCATaGTTTTTCTCTACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: KSRFTHSSQRKYHESPARITSPP*FFSTEQ
Trigger: TTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGAT...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR TCA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGATTAGCACAATCTGGATaGCGCGCCCCTCATAGATGT +
Preference number: 4 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRLAQSG*RAPHRC
Trigger: ACATCTATGAGGGGCGCGTCATCCAGATTGTGCTAA...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR TCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCATGTAGCCTTGCTTGTTaGGGCCCCAGACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSCSLAC*GPRQSL
Trigger: AAGACTTTGTCTGGGGCCTCAACAAGCAAGGCTACA...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTGTAGCCTTGCTTGTTaGGGCCCCAGACAAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFCSLAC*GPRQSL
Trigger: AAGACTTTGTCTGGGGCCTCAACAAGCAAGGCTACA...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGCAGTGCATCTGCCGATaGTCTTGTCGATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEQCICR*SCRCIS
Trigger: AGAAATGCATCGACAAGATCATCGGCAGATGCACTG...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTAGAAGGGGTGGATTTTaGTGTTTCCGGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVRRGGF*CFRSLP
Trigger: TGGGAGTGACCGGAAACATCAAAATCCACCCCTTCT...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATAACAGAGGAAGTACCATaGGAGCCCGGCCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: KDQHITSPPWFFSTEQYITEEVP*EPGQTA
Trigger: TGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGT...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR GCA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGCCAGAACTCAGCCTTaGCATTGTTCTTCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRARTQP*HCSSCS
Trigger: GCTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGC...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR GCA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGAACAGAAGGTGGGTTaGCCAAAGAAGGTGGCGATA +
Preference number: 4 (lower is better)
Translates to: LQFPSEGRGKADSHTVHREQKVG*PKKVAI
Trigger: TATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTC...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACTCACACTTTAATCCCTaGTTCACCAGTCCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHSHFNP*FTSPQS
Trigger: GCTCTGGGGACTGGTGAAGCAGGGATTAAAGTGTGA...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTCCCGGCATTTATGGTaGACATTCATGCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFSRHLW*TFMPQS
Trigger: AGACTGCGGCATGAATGTGCACCATAAATGCCGGGA...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCGAATATGTTCTCTTTaGACATCCCAAAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYRICSL*TSQSRQ
Trigger: TTGCCGACTTTGGGATGTGCAAAGAGAACATATTCG...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGTCGATGCATTTCTTGTaGATGGCAGCGTTACATTGC +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRSMHFL*MAALHC
Trigger: GCAATGTAACGCTGCCATCCACAAGAAATGCATCGA...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCATTCTCCCGGCATTTATaGTGCACATTCATGCCGCAG +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSFSRHL*CTFMPQ
Trigger: CTGCGGCATGAATGTGCACCATAAATGCCGGGAGAA...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTCAGCCAAAAGCTTCTaGTTGATGCCGCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFSAKSF*LMPQRL
Trigger: CAACCTCTGCGGCATCAACCAGAAGCTTTTGGCTGA...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCAGCGGCATAAAACGTaGCACGGTAGAGTTCAAAGC +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFQRHKT*HGRVQS
Trigger: GCTTTGAACTCTACCGTGCCACGTTTTATGCCGCTG...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGTCCCAGCCTCTTGGTTaGTTCCCTTTCAAAGAGCTT +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTESQPLG*FPFKEL
Trigger: AAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGTCACTCCCAGCCTCTTaGTTGGTTCCCTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTESLPAS*LVPFQR
Trigger: TCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGA...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAGTCTTGAAGAAGGGGTaGATTTTGATGTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVVLKKG*ILMFPV
Trigger: GACCGGAAACATCAAAATCCACCCCTTCTTCAAGAC...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGAGTTACTGTAGTCTCTaGGTGACTTCACTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTESYCSL*VTSLWA
Trigger: GGCCCAAAGTGAAGTCACCCAGAGACTACAGTAACT...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACGGAGGTGCTCGAATTTaGGGTTCACAAAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHGGARI*GSQRRS
Trigger: GCTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCC...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGATCACCAGTCCCCCATaGTTTTTCTCTACTGAGCAA +
Preference number: 4 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRITSPP*FFSTEQ
Trigger: TTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGAT...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR TCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCAGTGCATCTGCCGATaGTCTTGTCGATGCATTTCT +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHQCICR*SCRCIS
Trigger: AGAAATGCATCGACAAGATCATCGGCAGATGCACTG...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGTTCTTCTCGAAACCCTaGTATATCCCAACAGGCTCT +
Preference number: 4 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEFFSKP*YIPTGS
Trigger: AGAGCCTGTTGGGATATATCAGGGTTTCGAGAAGAA...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAATCTTCCAGGAGGTaGTCGAATTTGGGGTTCACA +
Preference number: 4 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSQSSRR*SNLGFT
Trigger: TGTGAACCCCAAATTCGAGCACCTCCTGGAAGATTG...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACTCACTCCCAGCCTCTTaGTTGGTTCCCTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHSLPAS*LVPFQR
Trigger: TCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGA...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGACAGCGTTACATTGCCTaGATTTGTAGCCTTGCTTGT +
Preference number: 4 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRQRYIA*ICSLAC
Trigger: ACAAGCAAGGCTACAAATGCAGGCAATGTAACGCTG...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATATGCCCTCCCAGATCTTaGCGTAGGTCCCACTGTTGT +
Preference number: 4 (lower is better)
Translates to: KDQHITSPPWFFSTEQYICPPRS*RRSHCC
Trigger: ACAACAGTGGGACCTACGGCAAGATCTGGGAGGGCA...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR CCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACGTCTTGAAGAAGGGGTaGATTTTGATGTTTCCGGTC +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHVLKKG*ILMFPV
Trigger: GACCGGAAACATCAAAATCCACCCCTTCTTCAAGAC...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTTATGGTGCACATTCATaGCGCAGTCTTCACACTTTA +
Preference number: 4 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVYGAHS*RSLHTL
Trigger: TAAAGTGTGAAGACTGCGGCATGAATGTGCACCATA...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCGAATATGTTCTCTTTaGACATCCCAAAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHRICSL*TSQSRQ
Trigger: TTGCCGACTTTGGGATGTGCAAAGAGAACATATTCG...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR GCA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCGAATATGTTCTCTTTaGACATCCCAAAGTCGGCAA +
Preference number: 4 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFRICSL*TSQSRQ
Trigger: TTGCCGACTTTGGGATGTGCAAAGAGAACATATTCG...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR TCA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATAAGAAGGGGTGGATTTTaGTGTTTCCGGTCACTCCCA +
Preference number: 4 (lower is better)
Translates to: KDQHITSPPWFFSTEQYIRRGGF*CFRSLP
Trigger: TGGGAGTGACCGGAAACATCAAAATCCACCCCTTCT...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR GCA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATATCCCGGCATTTATGGTaGACATTCATGCCGCAGTCT +
Preference number: 4 (lower is better)
Translates to: KDQHITSPPWFFSTEQYISRHLW*TFMPQS
Trigger: AGACTGCGGCATGAATGTGCACCATAAATGCCGGGA...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS GCA 90 bp GCTGCTACAACGCACCAACCACCAGGAGAAACGGGCCTGCCCCCTTaGCTGGCCAGTTCCCTGCAGACCGGCAGGTCTCGGCGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: AATTHQPPGETGLPP*LASSLQTGRSRRGG
Trigger: CCCGCCGCGCCGAGACCTGCCGGTCTGCAGGGAACTGGCCAGGCAAGGGGGCAGGCCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000487897.5
CDS-3UTR CAA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGCGCGGCGGTTCATCGTaGGGAACTTGGCCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: YHESPARRQPRTLWGQGRRGGSS*GTWPRP
Trigger: AGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCG...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS TCA 90 bp GGTTCGCCTCGTCCTCGGCCTGCAGGGAGCCCAGCTCATAGGAGTTaGAGGCGATGCGCAGGAACGGCGCCATGGTGGGGCCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: GSPRPRPAGSPAHRS*RRCAGTAPWWGLQW
Trigger: CCACTGCAGGCCCCACCATGGCGCCGTTCCTGCGCATCGCCTTCAACTCCTATGAGCTGGGCTCCCTGCAGGCCGAGGACGAGGCGAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000477794.2
ENST00000478843.5
ENST00000487897.5
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS GCA 90 bp GCTGCTACAACGCACCAACCACCAGGAGAAACGGGCCTGCCCCCTTaGCTGGCCAGTTCCCTGCAGACCTCCCGTTGCAGGGGCAGGCGC +
Preference number: 5 (lower is better)
Translates to: AATTHQPPGETGLPP*LASSLQTSRCRGRR
Trigger: GCGCCTGCCCCTGCAACGGGAGGTCTGCAGGGAACTGGCCAGGCAAGGGGGCAGGCCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000652449.1
CDS GCA 90 bp CTCCCGCTGCTGCTACAACGCACCAACCACCAGGAGAAACGGGCCTaGCCCCTTGCCTGGCCAGTTCCCTGCAGACCGGCAGGTCTCGGC +
Preference number: 5 (lower is better)
Translates to: LPLLLQRTNHQEKRA*PLAWPVPCRPAGLG
Trigger: GCCGAGACCTGCCGGTCTGCAGGGAACTGGCCAGGCAAGGGGGCAGGCCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAGCAGCGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487897.5
CDS GCA 90 bp GGCTGGGGCTCCCAGCTCCTGCTTGTCCTTAGTCCTGGCTCCCGCTaGTGCTACAACGCACCAACCACCAGGAGAAACGGGCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: GWGSQLLLVLSPGSR*CYNAPTTRRNGPAP
Trigger: GGGGGCAGGCCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGGACTAAGGACAAGCAGGAGCTGGGAGCCCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000487897.5
CDS-3UTR CAA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGGCCAAAAGCTTCTGGTaGATGCCGCAGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: YHESPARRQPRTLWGQGRAKSFW*MPQRLA
Trigger: GGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGC...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCGCGGCGGTTCATCGTaGGGAACTTGGCCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGRGGSS*GTWPRP
Trigger: AGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCG...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCGCGGCGGTTCATCGTaGGGAACTTGGCCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGRGGSS*GTWPRP
Trigger: AGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCG...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGTTGATGCCGCAGAGGTaGGCCACCTTCTCCCGGCAT +
Preference number: 5 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRLMPQR*ATFSRH
Trigger: ATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAA...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGCCAAAAGCTTCTGGTaGATGCCGCAGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGAKSFW*MPQRLA
Trigger: GGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGC...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCCTGGGTGACTTCACTTaGGGCCTGAAAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGLGDFT*GLKGGS
Trigger: GGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAG...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS GCA 90 bp TGGGGCTCCCAGCTCCTGCTTGTCCTTAGTCCTGGCTCCCGCTGCTaGTACAACGCACCAACCACCAGGAGAAACGGGCCTGCCCCCTTG +
Preference number: 5 (lower is better)
Translates to: WGSQLLLVLSPGSRC*YNAPTTRRNGPAPL
Trigger: CAAGGGGGCAGGCCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGGACTAAGGACAAGCAGGAGCTGGGAGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000330452.8
ENST00000487897.5
ENST00000652449.1
CDS GCA 90 bp ATAGGAGTTGAAGGCGATGCGCAGGAACGGCGCCATGGTGGGGCCTaGAGTGGGGCTCTCGGGCAGGCGCTGCCTTTCCCTCATTCCTGT +
Preference number: 5 (lower is better)
Translates to: IGVEGDAQERRHGGA*SGALGQALPFPHSC
Trigger: ACAGGAATGAGGGAAAGGCAGCGCCTGCCCGAGAGCCCCACTGCAGGCCCCACCATGGCGCCGTTCCTGCGCATCGCCTTCAACTCCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650940.1
CDS GCA 90 bp AACTGGGGCTCCCAGCTCCTGCTTGTCCTTAGTCCTGGCTCCCGCTaGTGCTACAACGCACCAACCACCAGGAGAAACGGGCCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: NWGSQLLLVLSPGSR*CYNAPTTRRNGPAP
Trigger: GGGGGCAGGCCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGGACTAAGGACAAGCAGGAGCTGGGAGCCCCAGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652449.1
CDS-3UTR CAA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGTGGATTTTGGCCTGTTaGATGGCTCCGCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRWILAC*MAPRRF
Trigger: GAACCGCCGCGGAGCCATCAAACAGGCCAAAATCCA...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGGTCACTCCCAGCCTCTaGGTTGGTTCCCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: YHESPARRQPRTLWGQGRVTPSL*VGSLSK
Trigger: CTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGAC...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGAGCCAGAACTCAGCCTaGCCATTGTTCTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: YHESPARRQPRTLWGQGRSQNSA*PLFFLQ
Trigger: CTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGCT...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCTTCATCGTTGGGAACTaGGCCTCGTCCTCACTGCGC +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGFIVGN*ASSSLR
Trigger: GCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAA...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGCGCGGCGGTTCATCGTaGGGAACTTGGCCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: SQRKYHESPARRQPRTLWRGGSS*GTWPRP
Trigger: AGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCG...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGATAGTGTCCCGGCTGTaGGCCGCGGTGCCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: SQRKYHESPARRQPRTLWIVSRL*AAVPVH
Trigger: ATGCACTGGCACCGCGGCCAACAGCCGGGACACTAT...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGCCAAAAGCTTCTGGTaGATGCCGCAGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGAKSFW*MPQRLA
Trigger: GGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCGGCTCTCTGGGTGACTaGGTTCAAGGCCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGGSLGD*VQGLSQ
Trigger: TTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGGGCTCTCTGGGTGACTaGGTTCAAGGCCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGGSLGD*VQGLSQ
Trigger: TTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCTTGTTGATGTTGCACTaGCTGCTGCCCTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGLLMLH*LLPSQI
Trigger: GATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAA...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCTTCCCGAAGCTGCCTTaGCCCAGGACCTTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGFPKLP*PRTLWK
Trigger: CTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAA...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCAGGACCACATCCTTCTaGAGGGCCTTGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGRTTSF*RALMAK
Trigger: CTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCT...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCTTCTCCAGGATGTCCTaGGACTCCTTGGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGFSRMS*DSLVIQ
Trigger: CTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAA...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCCCCCAGACAAAGTCTTaGCACACAGAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGPQTKS*HTEQKV
Trigger: CACCTTCTGTTCTGTGTGCAAAGACTTTGTCTGGGG...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCTGCATTTGTAGCCTaGCTTGTTGAGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGPAFVA*LVEAPD
Trigger: GTCTGGGGCCTCAACAAGCAAGGCTACAAATGCAGG...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGATAGTGTCCCGGCTGTaGGCCGCGGTGCCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: HSSQRKYHESPARRQPRTIVSRL*AAVPVH
Trigger: ATGCACTGGCACCGCGGCCAACAGCCGGGACACTAT...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCGGTGCGGCATGTCGATGTaGAAGCGTTCTTTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: YHESPARRQPRTLWGQGRCGMSM*KRSFWN
Trigger: ATTCCAGAAAGAACGCTTCAACATCGACATGCCGCA...CCGCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTTGATGCCGCAGAGGTaGGCCACCTTCTCCCGGCAT +
Preference number: 5 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVLMPQR*ATFSRH
Trigger: ATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAA...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCATGAAGTTGTTGATGTaGCACTTGCTGCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGMKLLM*HLLLPS
Trigger: GGAGGGCAGCAGCAAGTGCAACATCAACAACTTCAT...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCTGCGGCATGTCGATGTaGAAGCGTTCTTTCTGGAAC +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGCGMSM*KRSFWN
Trigger: GTTCCAGAAAGAACGCTTCAACATCGACATGCCGCA...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS GCA 90 bp GAGGCTGCAGGTCCAGCCAGAACTCAGCCTTGCCATTGTTCTTCTTaGAGCGCTCGGCCAGCACCGACACACCCACGGTCACCTCAGACA +
Preference number: 5 (lower is better)
Translates to: EAAGPARTQPCHCSS*SARPAPTHPRSPQT
Trigger: TGTCTGAGGTGACCGTGGGTGTGTCGGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGCTGGACCTGCAGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000487897.5
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGTTGCCATTGTTCTTCTaGCAGCGCTCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SQRKYHESPARRQPRTLWLPLFF*QRSAST
Trigger: GGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCAA...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGAACTCAGCCTTGCCATaGTTCTTCTTGCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGNSALP*FFLQRS
Trigger: CGAGCGCTGCAAGAAGAACAATGGCAAGGCTGAGTT...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAACTCAGCCTTGCCATaGTTCTTCTTGCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGNSALP*FFLQRS
Trigger: CGAGCGCTGCAAGAAGAACAATGGCAAGGCTGAGTT...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTTCATCGTTGGGAACTaGGCCTCGTCCTCACTGCGC +
Preference number: 5 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWFIVGN*ASSSLR
Trigger: GCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAA...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGATGGCAGCGTTACATaGCCTGCATTTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRDGSVT*PAFVAL
Trigger: CAAGGCTACAAATGCAGGCAATGTAACGCTGCCATC...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTTGATGCCGCAGAGGTaGGCCACCTTCTCCCGGCAT +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVLMPQR*ATFSRH
Trigger: ATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGGCCAAAAGCTTCTGGTaGATGCCGCAGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWAKSFW*MPQRLA
Trigger: GGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGC...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTTGTTGATGTTGCACTaGCTGCTGCCCTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGLLMLH*LLPSQI
Trigger: GATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGTTCCCGAAGCTGCCTTaGCCCAGGACCTTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SQRKYHESPARRQPRTLWFPKLP*PRTLWK
Trigger: CTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAA...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGAGTTCAAAGCGGCCTTaGTCCTGGATGTGGTACATC +
Preference number: 5 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRSSKRP*SWMWYI
Trigger: GATGTACCACATCCAGGACAAAGGCCGCTTTGAACT...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGCTGGGTGACTTCACTTaGGGCCTGAAAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWLGDFT*GLKGGS
Trigger: GGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAG...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGAGGAGGTGCTCGAATTaGGGGTTCACAAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GSTMRARPDGSQGRSGGRRRCSN*GFTKEK
Trigger: CTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCT...CCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTTTGCCATTGTTCTTCTaGCAGCGCTCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGLPLFF*QRSAST
Trigger: GGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCAA...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTTCATCGTTGGGAACTaGGCCTCGTCCTCACTGCGC +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVFIVGN*ASSSLR
Trigger: GCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTTGGATTTTGGCCTGTTaGATGGCTCCGCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGWILAC*MAPRRF
Trigger: GAACCGCCGCGGAGCCATCAAACAGGCCAAAATCCA...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCCCCAGACAAAGTCTTaGCACACAGAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGPQTKS*HTEQKV
Trigger: CACCTTCTGTTCTGTGTGCAAAGACTTTGTCTGGGG...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGGGGCTTGTCGATGCATTTCTaGTGGATGGCAGCGTTACAT +
Preference number: 5 (lower is better)
Translates to: STMRARPDGSQGRSGGRGLSMHF*WMAALH
Trigger: ATGTAACGCTGCCATCCACAAGAAATGCATCGACAA...GCCCCTGCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGGGTCCCACTGTTGTCTaGCATGTCCTCCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: HSSQRKYHESPARRQPRTGPTVV*HVLPSN
Trigger: GTTGCTGGGGAGGACATGCAAGACAACAGTGGGACC...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTCCCACTGTTGTCTaGCATGTCCTCCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGGPTVV*HVLPSN
Trigger: GTTGCTGGGGAGGACATGCAAGACAACAGTGGGACC...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTCCTTCTTGAGGGCCTaGATGGCAAAGTACTCTCCT +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGSFLRA*MAKYSP
Trigger: AGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCAGTTCAAAGCGGCCTTaGTCCTGGATGTGGTACATC +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGSSKRP*SWMWYI
Trigger: GATGTACCACATCCAGGACAAAGGCCGCTTTGAACT...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGAGGAGGTGCTCGAATTaGGGGTTCACAAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGRRCSN*GFTKEK
Trigger: CTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCT...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACGCAGTGGGGCTCCCGTaGCAGGGGCAGGCGCCAAGG +
Preference number: 5 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYAVGLP*QGQAPR
Trigger: CCTTGGCGCCTGCCCCTGCAACGGGAGCCCCACTGC...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000394729.6
CDS GCA 90 bp AATTGTCCCTTGAGGACACAATCGGGCAGGCTTTGTGAAGGGGGTTaGGTGAGGCCTTCCAAGACTGAGCAGAGCAGCCTGGGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: NCPLRTQSGRLCEGG*VRPSKTEQSSLGLR
Trigger: CCTGAGCCCCAGGCTGCTCTGCTCAGTCTTGGAAGGCCTCACGCAACCCCCTTCACAAAGCCTGCCCGATTGTGTCCTCAAGGGACAATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478843.5
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGCTGCGCATAGACTGTTaGCAATCCACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVLRIDC*QSTSSR
Trigger: CCTGGAGGACGTGGATTGCAAACAGTCTATGCGCAG...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTCTGCGCATAGACTGTTaGCAATCCACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGLRIDC*QSTSSR
Trigger: CCTGGAGGACGTGGATTGCAAACAGTCTATGCGCAG...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCGCGGCGGTTCATCGTaGGGAACTTGGCCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: SRFTHSSQRKYHESPARRRGGSS*GTWPRP
Trigger: AGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCG...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGAGAACAGAAGGTGGGTaGCCCAAAGAAGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWRTEGG*PKEGGD
Trigger: ATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTCT...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTCCTGCATTTGTAGCCTaGCTTGTTGAGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGPAFVA*LVEAPD
Trigger: GTCTGGGGCCTCAACAAGCAAGGCTACAAATGCAGG...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CTGGAACTGGAGGTGGGGGTATCACAGGCTGAGGGTCACGTGCCAGCTCCAGCCGATGGCAGCGTTACATaGCCTGCATTTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: LELEVGVSQAEGHVPAPADGSVT*PAFVAL
Trigger: CAAGGCTACAAATGCAGGCAATGTAACGCTGCCATC...GGCTGGAGCTGGCACGTGACCCTCAGCCTGTGATACCCCCACCTCCAGTTCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCATCTGCCGATGATCTaGTCGATGCATTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGHLPMI*SMHFLW
Trigger: CCACAAGAAATGCATCGACAAGATCATCGGCAGATG...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCTGCGGCATGTCGATGTaGAAGCGTTCTTTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGCGMSM*KRSFWN
Trigger: ATTCCAGAAAGAACGCTTCAACATCGACATGCCGCA...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGAGGACCACATCCTTCTaGAGGGCCTTGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVRTTSF*RALMAK
Trigger: CTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCT...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCCGAATATGTTCTCTTaGCACATCCCAAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGPNMFS*HIPKSA
Trigger: TGCCGACTTTGGGATGTGCAAAGAGAACATATTCGG...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTTCTCCAGGATGTCCTaGGACTCCTTGGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWFSRMS*DSLVIQ
Trigger: CTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAA...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTTCTCCAGGATGTCCTaGGACTCCTTGGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVFSRMS*DSLVIQ
Trigger: CTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAA...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGCTCCCAGCCTCTTGGTaGGTTCCCTTTCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SQRKYHESPARRQPRTLWLPASW*VPFQRA
Trigger: AGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAG...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CCA 90 bp TGCCAGCTCCAGCCTCTTCTTCAACCCCTAGCTCTCCCCCAACCCTaGGCACAACAACATCCCAAGAGAGCTCCATATAGTGTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: CQLQPLLQPLALPQP*AQQHPKRAPYSVPA
Trigger: AGCCGGGACACTATATGGAGCTCTCTTGGGATGTTGTTGTGCCCAGGGTTGGGGGAGAGCTAGGGGTTGAAGAAGAGGCTGGAGCTGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGAGAACAGAAGGTGGGTaGCCCAAAGAAGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVRTEGG*PKEGGD
Trigger: ATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTCT...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGTTGTCGATGCATTTCTaGTGGATGGCAGCGTTACAT +
Preference number: 5 (lower is better)
Translates to: QRKYHESPARRQPRTLWGLSMHF*WMAALH
Trigger: ATGTAACGCTGCCATCCACAAGAAATGCATCGACAA...CCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCTTGTCGATGCATTTCTaGTGGATGGCAGCGTTACAT +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGLSMHF*WMAALH
Trigger: ATGTAACGCTGCCATCCACAAGAAATGCATCGACAA...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTTGATGCCGCAGAGGTaGGCCACCTTCTCCCGGCAT +
Preference number: 5 (lower is better)
Translates to: SRFTHSSQRKYHESPARRLMPQR*ATFSRH
Trigger: ATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGATGAAGTTGTTGATGTaGCACTTGCTGCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWMKLLM*HLLLPS
Trigger: GGAGGGCAGCAGCAAGTGCAACATCAACAACTTCAT...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGATGAAGTTGTTGATGTaGCACTTGCTGCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVMKLLM*HLLLPS
Trigger: GGAGGGCAGCAGCAAGTGCAACATCAACAACTTCAT...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGAGGACCACATCCTTCTaGAGGGCCTTGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: HSSQRKYHESPARRQPRTRTTSF*RALMAK
Trigger: CTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCT...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTAAGAACAGGTGGTCCTaGGTCTGGAAGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGKNRWS*VWKVQM
Trigger: CATCTGCACCTTCCAGACCAAGGACCACCTGTTCTT...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGAGTTCAAAGCGGCCTTaGTCCTGGATGTGGTACATC +
Preference number: 5 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVSSKRP*SWMWYI
Trigger: GATGTACCACATCCAGGACAAAGGCCGCTTTGAACT...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGCTCCCAGCCTCTTGGTaGGTTCCCTTTCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVLPASW*VPFQRA
Trigger: AGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAG...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTCACTCCCAGCCTCTaGGTTGGTTCCCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGVTPSL*VGSLSK
Trigger: CTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGAC...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGGTCACTCCCAGCCTCTaGGTTGGTTCCCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: HSSQRKYHESPARRQPRTVTPSL*VGSLSK
Trigger: CTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGAC...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAACTGCGCATAGACTGTTaGCAATCCACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQLRIDC*QSTSSR
Trigger: CCTGGAGGACGTGGATTGCAAACAGTCTATGCGCAG...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTGGATTTTGGCCTGTTaGATGGCTCCGCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: SRFTHSSQRKYHESPARRWILAC*MAPRRF
Trigger: GAACCGCCGCGGAGCCATCAAACAGGCCAAAATCCA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGCCCCAGACAAAGTCTTaGCACACAGAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVPQTKS*HTEQKV
Trigger: CACCTTCTGTTCTGTGTGCAAAGACTTTGTCTGGGG...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGCATCTGCCGATGATCTaGTCGATGCATTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SQRKYHESPARRQPRTLWHLPMI*SMHFLW
Trigger: CCACAAGAAATGCATCGACAAGATCATCGGCAGATG...CCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATAGTGTCCCGGCTGTaGGCCGCGGTGCCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAIVSRL*AAVPVH
Trigger: ATGCACTGGCACCGCGGCCAACAGCCGGGACACTAT...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GTCGCTGTAGGAGAGGCGCGCCTTCTCGTTCAGGAACTCCTGGTCAAAGTTACTGGCTCTCTGGGTGACTaGGTTCAAGGCCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: VAVGEARLLVQELLVKVTGSLGD*VQGLSQ
Trigger: TTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC...AGTAACTTTGACCAGGAGTTCCTGAACGAGAAGGCGCGCCTCTCCTACAGCGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CAA 90 bp AGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCTCTGGGGGCTTGTGGAAGATGAAGTaGTTGATGTTGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: RGSTMRARPDGSQGRSGGLWKMK*LMLHLL
Trigger: CAGCAAGTGCAACATCAACAACTTCATCTTCCACAA...GCCCCCAGAGCGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGTTCCCGAAGCTGCCTTaGCCCAGGACCTTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SRFTHSSQRKYHESPARRFPKLP*PRTLWK
Trigger: CTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAA...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTCCTTCTTGAGGGCCTaGATGGCAAAGTACTCTCCT +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVSFLRA*MAKYSP
Trigger: AGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTTCCTTCTTGAGGGCCTaGATGGCAAAGTACTCTCCT +
Preference number: 5 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGSFLRA*MAKYSP
Trigger: AGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGA...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTAGTTCAAAGCGGCCTTaGTCCTGGATGTGGTACATC +
Preference number: 5 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGSSKRP*SWMWYI
Trigger: GATGTACCACATCCAGGACAAAGGCCGCTTTGAACT...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTAGTTCAAAGCGGCCTTaGTCCTGGATGTGGTACATC +
Preference number: 5 (lower is better)
Translates to: RSHHSPTGAYRGERAGVGSSKRP*SWMWYI
Trigger: GATGTACCACATCCAGGACAAAGGCCGCTTTGAACT...ACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGCCGAATATGTTCTCTTaGCACATCCCAAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: AAEVTTVPLVLIVGSGQVPNMFS*HIPKSA
Trigger: TGCCGACTTTGGGATGTGCAAAGAGAACATATTCGG...CACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTAGGAGGTGCTCGAATTaGGGGTTCACAAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SSRSHHSPTGAYRGERAGRRCSN*GFTKEK
Trigger: CTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCT...ACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGAGGAGGTGCTCGAATTaGGGGTTCACAAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVRRCSN*GFTKEK
Trigger: CTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCT...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS GCA 90 bp GCATCGAACGTCGACTTCCACTCAGGATACATGGTCGGCTTCTTCTaGACCAGTGTTTTCCCACGCTCTGTGCTGAGCGCCTCCTTCATC +
Preference number: 5 (lower is better)
Translates to: ASNVDFHSGYMVGFF*TSVFPRSVLSASFI
Trigger: GATGAAGGAGGCGCTCAGCACAGAGCGTGGGAAAACACTGGTGCAGAAGAAGCCGACCATGTATCCTGAGTGGAAGTCGACGTTCGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000478843.5
ENST00000487897.5
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACATAGTGTCCCGGCTGTaGGCCGCGGTGCCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYIVSRL*AAVPVH
Trigger: ATGCACTGGCACCGCGGCCAACAGCCGGGACACTAT...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAATAGTGTCCCGGCTGTaGGCCGCGGTGCCAGTGCAT +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARIVSRL*AAVPVH
Trigger: ATGCACTGGCACCGCGGCCAACAGCCGGGACACTAT...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTTGATGCCGCAGAGGTaGGCCACCTTCTCCCGGCAT +
Preference number: 5 (lower is better)
Translates to: KADSHTVHRGSTMRARPDLMPQR*ATFSRH
Trigger: ATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAAGGACGCCGAATATGTTCTCTTaGCACATCCCAAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: HSSQRKYHESPARRQPRTPNMFS*HIPKSA
Trigger: TGCCGACTTTGGGATGTGCAAAGAGAACATATTCGG...CGTCCTTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAATTCTCCAGGATGTCCTaGGACTCCTTGGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQFSRMS*DSLVIQ
Trigger: CTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAA...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CCA 90 bp GTAGTGGATTTTGGCCTGTTTGATGGCTCCGCGGCGGTTCATCGTTaGGAACTTGGCCTCGTCCTCACTGCGCATAGACTGTTTGCAATC +
Preference number: 5 (lower is better)
Translates to: VVDFGLFDGSAAVHR*ELGLVLTAHRLFAI
Trigger: GATTGCAAACAGTCTATGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCGGAGCCATCAAACAGGCCAAAATCCACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000650739.1
ENST00000650940.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CACTCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTTTCATCGTTGGGAACTaGGCCTCGTCCTCACTGCGC +
Preference number: 5 (lower is better)
Translates to: HSQPLGWFPFKELLQDVLFIVGN*ASSSLR
Trigger: GCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAA...AAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CAA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTGGATTTTGGCCTGTTaGATGGCTCCGCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: KADSHTVHRGSTMRARPDWILAC*MAPRRF
Trigger: GAACCGCCGCGGAGCCATCAAACAGGCCAAAATCCA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGAGAACAGAAGGTGGGTaGCCCAAAGAAGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: SRFTHSSQRKYHESPARRRTEGG*PKEGGD
Trigger: ATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTCT...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCCCAGCCTCTTGGTTGGTTCCCTTTCAAAGAGCTTCTCCAGGATGTCCTTGGAGGTCCCACTGTTGTCTaGCATGTCCTCCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: SQPLGWFPFKELLQDVLGGPTVV*HVLPSN
Trigger: GTTGCTGGGGAGGACATGCAAGACAACAGTGGGACC...TCCAAGGACATCCTGGAGAAGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CAA 90 bp AAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGGGTGGTTGTGGAAGATGAAGTaGTTGATGTTGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: KSPQSHWCLSWGAGRCGWLWKMK*LMLHLL
Trigger: CAGCAAGTGCAACATCAACAACTTCATCTTCCACAA...CCACCCACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATTCCCGAAGCTGCCTTaGCCCAGGACCTTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: GKADSHTVHRGSTMRARPFPKLP*PRTLWK
Trigger: CTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAA...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCAGCCAATCCTTCTTGAGGGCCTaGATGGCAAAGTACTCTCCT +
Preference number: 5 (lower is better)
Translates to: SHTVHRGSTMRARPDGSQSFLRA*MAKYSP
Trigger: AGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGA...TTGGCTGCCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGAAGAACAGGTGGTCCTaGGTCTGGAAGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: SRFTHSSQRKYHESPARRKNRWS*VWKVQM
Trigger: CATCTGCACCTTCCAGACCAAGGACCACCTGTTCTT...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACCTGGGTGACTTCACTTaGGGCCTGAAAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: KADSHTVHRGSTMRARPDLGDFT*GLKGGS
Trigger: GGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAG...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CCA 90 bp TGCAATCCACGTCCTCCAGGAAATACTGAACAGACATCAACACCTTaGCCTGAGGCTGCAGGTCCAGCCAGAACTCAGCCTTGCCATTGT +
Preference number: 5 (lower is better)
Translates to: CNPRPPGNTEQTSTP*PEAAGPARTQPCHC
Trigger: ACAATGGCAAGGCTGAGTTCTGGCTGGACCTGCAGCCTCAGGCCAAGGTGTTGATGTCTGTTCAGTATTTCCTGGAGGACGTGGATTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACCCTGCATTTGTAGCCTaGCTTGTTGAGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: KADSHTVHRGSTMRARPDPAFVA*LVEAPD
Trigger: GTCTGGGGCCTCAACAAGCAAGGCTACAAATGCAGG...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAGCCAAAAGCTTCTGGTaGATGCCGCAGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARAKSFW*MPQRLA
Trigger: GGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGC...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACGGTCCCACTGTTGTCTaGCATGTCCTCCCCAGCAAC +
Preference number: 5 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYGPTVV*HVLPSN
Trigger: GTTGCTGGGGAGGACATGCAAGACAACAGTGGGACC...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AGCAGAAGTCACCACAGTCCCACTGGTGCTTATCGTGGGGAGCGGGCAGGTGTGTTGTGGAAGATGAAGTaGTTGATGTTGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: SRSHHSPTGAYRGERAGVLWKMK*LMLHLL
Trigger: CAGCAAGTGCAACATCAACAACTTCATCTTCCACAA...CACACCTGCCCGCTCCCCACGATAAGCACCAGTGGGACTGTGGTGACTTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACTTCCCGAAGCTGCCTTaGCCCAGGACCTTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYFPKLP*PRTLWK
Trigger: CTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAA...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp ATCAGGACCACATCCTTCTTGAGGGCCTTGATGGCAAAGTACTCTCCTCTGCCCCTCCCAGCCTCTTGGTaGGTTCCCTTTCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: IRTTSFLRALMAKYSPLPLPASW*VPFQRA
Trigger: AGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAG...GGGCAGAGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651505.1
CDS-3UTR CAA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTTTGCCATTGTTCTTCTaGCAGCGCTCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSLPLFF*QRSAST
Trigger: GGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCAA...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CAA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGTTGCCATTGTTCTTCTaGCAGCGCTCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRLPLFF*QRSAST
Trigger: GGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCAA...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAACTCAGCCTTGCCATaGTTCTTCTTGCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RKSRFTHSSQRKYHESPANSALP*FFLQRS
Trigger: CGAGCGCTGCAAGAAGAACAATGGCAAGGCTGAGTT...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCGCGGCGGTTCATCGTaGGGAACTTGGCCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVRGGSS*GTWPRP
Trigger: AGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCG...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACGGCATCTGCCGATGATCTaGTCGATGCATTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SRFTHSSQRKYHESPARRHLPMI*SMHFLW
Trigger: CCACAAGAAATGCATCGACAAGATCATCGGCAGATG...CCGTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGGGCTCTCTGGGTGACTaGGTTCAAGGCCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRGSLGD*VQGLSQ
Trigger: TTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCTTGTTGATGTTGCACTaGCTGCTGCCCTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: RKSRFTHSSQRKYHESPALLMLH*LLPSQI
Trigger: GATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAA...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGTTCCCGAAGCTGCCTTaGCCCAGGACCTTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRFPKLP*PRTLWK
Trigger: CTTCCACAAGGTCCTGGGCAAAGGCAGCTTCGGGAA...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACAAGAACAGGTGGTCCTaGGTCTGGAAGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: KADSHTVHRGSTMRARPDKNRWS*VWKVQM
Trigger: CATCTGCACCTTCCAGACCAAGGACCACCTGTTCTT...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTTCTCCAGGATGTCCTaGGACTCCTTGGTGATCCAG +
Preference number: 5 (lower is better)
Translates to: KADSHTVHRGSTMRARPDFSRMS*DSLVIQ
Trigger: CTGGATCACCAAGGAGTCCAAGGACATCCTGGAGAA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAAACTCAGCCTTGCCATaGTTCTTCTTGCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARNSALP*FFLQRS
Trigger: CGAGCGCTGCAAGAAGAACAATGGCAAGGCTGAGTT...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACTGCGCATAGACTGTTaGCAATCCACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVLRIDC*QSTSSR
Trigger: CCTGGAGGACGTGGATTGCAAACAGTCTATGCGCAG...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCCCCCAGACAAAGTCTTaGCACACAGAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAPQTKS*HTEQKV
Trigger: CACCTTCTGTTCTGTGTGCAAAGACTTTGTCTGGGG...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACTTGATGCCGCAGAGGTaGGCCACCTTCTCCCGGCAT +
Preference number: 5 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHLMPQR*ATFSRH
Trigger: ATGCCGGGAGAAGGTGGCCAACCTCTGCGGCATCAA...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATTGTTGATGTTGCACTaGCTGCTGCCCTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARLLMLH*LLPSQI
Trigger: GATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAAAGAACAGGTGGTCCTaGGTCTGGAAGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARKNRWS*VWKVQM
Trigger: CATCTGCACCTTCCAGACCAAGGACCACCTGTTCTT...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACAAGAACAGGTGGTCCTaGGTCTGGAAGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: SLRRQRKSRFTHSSQRKYKNRWS*VWKVQM
Trigger: CATCTGCACCTTCCAGACCAAGGACCACCTGTTCTT...GTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGCTGGGTGACTTCACTTaGGGCCTGAAAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTELGDFT*GLKGGS
Trigger: GGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAG...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAAGGAGGTGCTCGAATTaGGGGTTCACAAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GKADSHTVHRGSTMRARPRRCSN*GFTKEK
Trigger: CTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCT...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTTGCCATTGTTCTTCTaGCAGCGCTCGGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFLPLFF*QRSAST
Trigger: GGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCAA...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAAACTCAGCCTTGCCATaGTTCTTCTTGCAGCGCTCG +
Preference number: 5 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVNSALP*FFLQRS
Trigger: CGAGCGCTGCAAGAAGAACAATGGCAAGGCTGAGTT...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGAAGCCAGAACTCAGCCTaGCCATTGTTCTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARSQNSA*PLFFLQ
Trigger: CTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGCT...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGATGGATTTTGGCCTGTTaGATGGCTCCGCGGCGGTTC +
Preference number: 5 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRWILAC*MAPRRF
Trigger: GAACCGCCGCGGAGCCATCAAACAGGCCAAAATCCA...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAGAACAGAAGGTGGGTaGCCCAAAGAAGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRRTEGG*PKEGGD
Trigger: ATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTCT...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTAAGAACAGAAGGTGGGTaGCCCAAAGAAGGTGGCGAT +
Preference number: 5 (lower is better)
Translates to: FPPKAEEKQIHTQFTEEVRTEGG*PKEGGD
Trigger: ATCGCCACCTTCTTTGGGCAACCCACCTTCTGTTCT...TACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGCCTGCATTTGTAGCCTaGCTTGTTGAGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEPAFVA*LVEAPD
Trigger: GTCTGGGGCCTCAACAAGCAAGGCTACAAATGCAGG...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTGCCAAAAGCTTCTGGTaGATGCCGCAGAGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVAKSFW*MPQRLA
Trigger: GGCCAACCTCTGCGGCATCAACCAGAAGCTTTTGGC...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAGGCTCTCTGGGTGACTaGGTTCAAGGCCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSGSLGD*VQGLSQ
Trigger: TTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTGGCTCTCTGGGTGACTaGGTTCAAGGCCTCAGCCAA +
Preference number: 5 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVGSLGD*VQGLSQ
Trigger: TTGGCTGAGGCCTTGAACCAAGTCACCCAGAGAGCC...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTTTGTTGATGTTGCACTaGCTGCTGCCCTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSLLMLH*LLPSQI
Trigger: GATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAA...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGAACAGGTGGTCCTaGGTCTGGAAGGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRKNRWS*VWKVQM
Trigger: CATCTGCACCTTCCAGACCAAGGACCACCTGTTCTT...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCCCGAATATGTTCTCTTaGCACATCCCAAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: RKSRFTHSSQRKYHESPAPNMFS*HIPKSA
Trigger: TGCCGACTTTGGGATGTGCAAAGAGAACATATTCGG...GGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTGTCACTCCCAGCCTCTaGGTTGGTTCCCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSVTPSL*VGSLSK
Trigger: CTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGAC...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCTGCGCATAGACTGTTaGCAATCCACGTCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFLRIDC*QSTSSR
Trigger: CCTGGAGGACGTGGATTGCAAACAGTCTATGCGCAG...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCTGCATTTGTAGCCTaGCTTGTTGAGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSPAFVA*LVEAPD
Trigger: GTCTGGGGCCTCAACAAGCAAGGCTACAAATGCAGG...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACTTGTCGATGCATTTCTaGTGGATGGCAGCGTTACAT +
Preference number: 5 (lower is better)
Translates to: KADSHTVHRGSTMRARPDLSMHF*WMAALH
Trigger: ATGTAACGCTGCCATCCACAAGAAATGCATCGACAA...GTCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGACATCTGCCGATGATCTaGTCGATGCATTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARHLPMI*SMHFLW
Trigger: CCACAAGAAATGCATCGACAAGATCATCGGCAGATG...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATGCGGCATGTCGATGTaGAAGCGTTCTTTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARCGMSM*KRSFWN
Trigger: ATTCCAGAAAGAACGCTTCAACATCGACATGCCGCA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGTTGTTGATGTTGCACTaGCTGCTGCCCTCCCAGATC +
Preference number: 5 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTELLMLH*LLPSQI
Trigger: GATCTGGGAGGGCAGCAGCAAGTGCAACATCAACAA...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp ACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGTCCTTCTTGAGGGCCTaGATGGCAAAGTACTCTCCT +
Preference number: 5 (lower is better)
Translates to: TISLRRQRKSRFTHSSQRSFLRA*MAKYSP
Trigger: AGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGA...CCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGAGCCAGAACTCAGCCTaGCCATTGTTCTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTESQNSA*PLFFLQ
Trigger: CTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGCT...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTCATCTGCCGATGATCTaGTCGATGCATTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: FPSEGRGKADSHTVHRGSHLPMI*SMHFLW
Trigger: CCACAAGAAATGCATCGACAAGATCATCGGCAGATG...ACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGATGAAGTTGTTGATGTaGCACTTGCTGCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: YNFPPKAEEKQIHTQFTEMKLLM*HLLLPS
Trigger: GGAGGGCAGCAGCAAGTGCAACATCAACAACTTCAT...CTCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GGAAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCATTGTGGAAGATGAAGTaGTTGATGTTGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GKADSHTVHRGSTMRARPLWKMK*LMLHLL
Trigger: CAGCAAGTGCAACATCAACAACTTCATCTTCCACAA...TGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAAGGACCACATCCTTCTaGAGGGCCTTGATGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRRTTSF*RALMAK
Trigger: CTTTGCCATCAAGGCCCTCAAGAAGGATGTGGTCCT...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCTCCCAGCCTCTTGGTaGGTTCCCTTTCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVLPASW*VPFQRA
Trigger: AGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAG...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCTCCCAGCCTCTTGGTaGGTTCCCTTTCAAAGAGCT +
Preference number: 5 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHLPASW*VPFQRA
Trigger: AGCTCTTTGAAAGGGAACCAACCAAGAGGCTGGGAG...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAGTCACTCCCAGCCTCTaGGTTGGTTCCCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSVTPSL*VGSLSK
Trigger: CTTTGAAAGGGAACCAACCAAGAGGCTGGGAGTGAC...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAAGCCAGAACTCAGCCTaGCCATTGTTCTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRSQNSA*PLFFLQ
Trigger: CTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGCT...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACCCCAGACAAAGTCTTaGCACACAGAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSPQTKS*HTEQKV
Trigger: CACCTTCTGTTCTGTGTGCAAAGACTTTGTCTGGGG...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCCCCAGACAAAGTCTTaGCACACAGAACAGAAGGTG +
Preference number: 5 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFPQTKS*HTEQKV
Trigger: CACCTTCTGTTCTGTGTGCAAAGACTTTGTCTGGGG...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCAGATGGCAGCGTTACATaGCCTGCATTTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSDGSVT*PAFVAL
Trigger: CAAGGCTACAAATGCAGGCAATGTAACGCTGCCATC...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTGATGGCAGCGTTACATaGCCTGCATTTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVDGSVT*PAFVAL
Trigger: CAAGGCTACAAATGCAGGCAATGTAACGCTGCCATC...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGAGATGGCAGCGTTACATaGCCTGCATTTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRDGSVT*PAFVAL
Trigger: CAAGGCTACAAATGCAGGCAATGTAACGCTGCCATC...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACATGAAGTTGTTGATGTaGCACTTGCTGCTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHMKLLM*HLLLPS
Trigger: GGAGGGCAGCAGCAAGTGCAACATCAACAACTTCAT...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAAGCAGATTCACACACAGTTCACAGAGGAAGTACCATGAGAGCCCGGCCAGATTGTGGAAGATGAAGTaGTTGATGTTGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: KSRFTHSSQRKYHESPARLWKMK*LMLHLL
Trigger: CAGCAAGTGCAACATCAACAACTTCATCTTCCACAA...TCTGGCCGGGCTCTCATGGTACTTCCTCTGTGAACTGTGTGTGAATCTGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS-3UTR CAA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCATCCTTCTTGAGGGCCTaGATGGCAAAGTACTCTCCT +
Preference number: 5 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSSFLRA*MAKYSP
Trigger: AGGAGAGTACTTTGCCATCAAGGCCCTCAAGAAGGA...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp CAGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTAGTTCAAAGCGGCCTTaGTCCTGGATGTGGTACATC +
Preference number: 5 (lower is better)
Translates to: QDLQFPSEGRGKADSHTVSSKRP*SWMWYI
Trigger: GATGTACCACATCCAGGACAAAGGCCGCTTTGAACT...AACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATATTCATCGTTGGGAACTaGGCCTCGTCCTCACTGCGC +
Preference number: 5 (lower is better)
Translates to: KDQHITSPPWFFSTEQYIFIVGN*ASSSLR
Trigger: GCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAA...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR CAA 90 bp AGGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCCATCTGCCGATGATCTaGTCGATGCATTTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: RIYNFPPKAEEKQIHTQFHLPMI*SMHFLW
Trigger: CCACAAGAAATGCATCGACAAGATCATCGGCAGATG...GAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGACCGAATATGTTCTCTTaGCACATCCCAAAGTCGGCA +
Preference number: 5 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRPNMFS*HIPKSA
Trigger: TGCCGACTTTGGGATGTGCAAAGAGAACATATTCGG...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATACTGGGTGACTTCACTTaGGGCCTGAAAGGTGGCTCC +
Preference number: 5 (lower is better)
Translates to: KDQHITSPPWFFSTEQYILGDFT*GLKGGS
Trigger: GGAGCCACCTTTCAGGCCCAAAGTGAAGTCACCCAG...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR CAA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATACCTGCATTTGTAGCCTaGCTTGTTGAGGCCCCAGAC +
Preference number: 5 (lower is better)
Translates to: KDQHITSPPWFFSTEQYIPAFVA*LVEAPD
Trigger: GTCTGGGGCCTCAACAAGCAAGGCTACAAATGCAGG...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR CAA 90 bp TTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACAGATTGTCGATGCATTTCTaGTGGATGGCAGCGTTACAT +
Preference number: 5 (lower is better)
Translates to: LQFPSEGRGKADSHTVHRLSMHF*WMAALH
Trigger: ATGTAACGCTGCCATCCACAAGAAATGCATCGACAA...TCTGTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCACTTGTCGATGCATTTCTaGTGGATGGCAGCGTTACAT +
Preference number: 5 (lower is better)
Translates to: DLQFPSEGRGKADSHTVHLSMHF*WMAALH
Trigger: ATGTAACGCTGCCATCCACAAGAAATGCATCGACAA...GTGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp GGATTTACAATTTCCCTCCGAAGGCAGAGGAAAAGCAGATTCACACACAGTTCATTGTGGAAGATGAAGTaGTTGATGTTGCACTTGCTG +
Preference number: 5 (lower is better)
Translates to: GFTISLRRQRKSRFTHSSLWKMK*LMLHLL
Trigger: CAGCAAGTGCAACATCAACAACTTCATCTTCCACAA...TGAACTGTGTGTGAATCTGCTTTTCCTCTGCCTTCGGAGGGAAATTGTAAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000651505.1
ENST00000652449.1
CDS-3UTR CAA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATAAGCCAGAACTCAGCCTaGCCATTGTTCTTCTTGCAG +
Preference number: 5 (lower is better)
Translates to: KDQHITSPPWFFSTEQYISQNSA*PLFFLQ
Trigger: CTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGCT...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR CAA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATAGATGGCAGCGTTACATaGCCTGCATTTGTAGCCTTG +
Preference number: 5 (lower is better)
Translates to: KDQHITSPPWFFSTEQYIDGSVT*PAFVAL
Trigger: CAAGGCTACAAATGCAGGCAATGTAACGCTGCCATC...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS-3UTR CAA 90 bp AAAGATCAACATATCACCAGTCCCCCATGGTTTTTCTCTACTGAGCAATATATAAGGAGGTGCTCGAATTaGGGGTTCACAAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: KDQHITSPPWFFSTEQYIRRCSN*GFTKEK
Trigger: CTTCTCCTTTGTGAACCCCAAATTCGAGCACCTCCT...TATATATTGCTCAGTAGAGAAAAACCATGGGGGACTGGTGATATGTTGATCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000330452.8
ENST00000394729.6
CDS TCA 72 bp CTCCCCGGCGCGCGCGGACGGGGTTCGGCGCGGCGCTaGCTGGGATGGGCCAAGCGGCCAGTGAGGTGTGGC +
Preference number: 6 (lower is better)
Translates to: LPGARGRGSARR*LGWAKRPVRCG
Trigger: GCCACACCTCACTGGCCGCTTGGCCCATCCCAGTCAGCGCCGCGCCGAACCCCGTCCGCGCGCGCCGGGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000477794.2
ENST00000652449.1
CDS CCA 72 bp CGATGCGCAGGAACGGCGCCATGGTGGGGCCTGCAGTaGGGCTCTCGGGCAGGCGCTGCCTTTCCCTCATTC +
Preference number: 6 (lower is better)
Translates to: RCAGTAPWWGLQ*GSRAGAAFPSF
Trigger: GAATGAGGGAAAGGCAGCGCCTGCCCGAGAGCCCCACTGCAGGCCCCACCATGGCGCCGTTCCTGCGCATCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650940.1
CDS TCA 72 bp CGTCCTCGGCCTGCAGGGAGCCCAGCTCATAGGAGTTaGAGGCGATGCGCAGGAACGGCGCCATGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: RPRPAGSPAHRS*RRCAGTAPWWG
Trigger: GCCCCACCATGGCGCCGTTCCTGCGCATCGCCTTCAACTCCTATGAGCTGGGCTCCCTGCAGGCCGAGGACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000477794.2
ENST00000478843.5
ENST00000487897.5
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS GCA 72 bp CTGCTACAACGCACCAACCACCAGGAGAAACGGGCCTaGCCCCTTGCCTGGCCAGTTCCCTGCAGACCGGCA +
Preference number: 6 (lower is better)
Translates to: LLQRTNHQEKRA*PLAWPVPCRPA
Trigger: TGCCGGTCTGCAGGGAACTGGCCAGGCAAGGGGGCAGGCCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487897.5
CDS TCA 72 bp GGACACAATCGGGCAGGCTTTGTGAAGGGGGTTGCGTaGGGCCTTCCAAGACTGAGCAGAGCAGCCTGGGGC +
Preference number: 6 (lower is better)
Translates to: GHNRAGFVKGVA*GLPRLSRAAWG
Trigger: GCCCCAGGCTGCTCTGCTCAGTCTTGGAAGGCCTCACGCAACCCCCTTCACAAAGCCTGCCCGATTGTGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000478843.5
CDS GCA 72 bp TGGCCTGAGGCTGCAGGTCCAGCCAGAACTCAGCCTTaGCATTGTTCTTCTTGCAGCGCTCGGCCAGCACCG +
Preference number: 6 (lower is better)
Translates to: WPEAAGPARTQP*HCSSCSARPAP
Trigger: CGGTGCTGGCCGAGCGCTGCAAGAAGAACAATGGCAAGGCTGAGTTCTGGCTGGACCTGCAGCCTCAGGCCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000487897.5
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS GCA 72 bp CAGCTCCTGCTTGTCCTTAGTCCTGGCTCCCGCTGCTaGTACAACGCACCAACCACCAGGAGAAACGGGCCT +
Preference number: 6 (lower is better)
Translates to: QLLLVLSPGSRC*YNAPTTRRNGP
Trigger: AGGCCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGGACTAAGGACAAGCAGGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000464818.1
ENST00000487897.5
ENST00000652449.1
CDS GCA 72 bp TCCCAGCTCCTGCTTGTCCTTAGTCCTGGCTCCCGCTaGTGCTACAACGCACCAACCACCAGGAGAAACGGG +
Preference number: 6 (lower is better)
Translates to: SQLLLVLSPGSR*CYNAPTTRRNG
Trigger: CCCGTTTCTCCTGGTGGTTGGTGCGTTGTAGCAGCAGCGGGAGCCAGGACTAAGGACAAGCAGGAGCTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000330452.8
ENST00000464818.1
ENST00000487897.5
ENST00000652449.1
CDS TCA 72 bp CTGGCTCCTCTGCTGCCCGCATTAGCACAATCTGGATaGCGCGCCCCTCATAGATGTGGGCATCGAACGTCG +
Preference number: 6 (lower is better)
Translates to: LAPLLPALAQSG*RAPHRCGHRTS
Trigger: CGACGTTCGATGCCCACATCTATGAGGGGCGCGTCATCCAGATTGTGCTAATGCGGGCAGCAGAGGAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000487897.5
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS TCA 72 bp CCCGGCTGTTGGCCGCGGTGCCAGTGCATCTGCCGATaGTCTTGTCGATGCATTTCTTGTGGATGGCAGCGT +
Preference number: 6 (lower is better)
Translates to: PGCWPRCQCICR*SCRCISCGWQR
Trigger: ACGCTGCCATCCACAAGAAATGCATCGACAAGATCATCGGCAGATGCACTGGCACCGCGGCCAACAGCCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000650940.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CCA 72 bp TTTGGCCTGTTTGATGGCTCCGCGGCGGTTCATCGTTaGGAACTTGGCCTCGTCCTCACTGCGCATAGACTG +
Preference number: 6 (lower is better)
Translates to: FGLFDGSAAVHR*ELGLVLTAHRL
Trigger: CAGTCTATGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCGGAGCCATCAAACAGGCCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000650739.1
ENST00000650940.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CAA 72 bp CCAGGAAAGTCAGGAAGACCTGAGCTCGCCCATTCCTaGGATGGAGCAACTGAGGTCCTGGGTGTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: PGKSGRPELAHS*DGATEVLGVRV
Trigger: GACCCTCACACCCAGGACCTCAGTTGCTCCATCCAAGGAATGGGCGAGCTCAGGTCTTCCTGACTTTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478843.5
CDS CAA 90 bp GTGTCCCGGCTGTTGGCCGCGGTGCCAGTGCATCTGCCGATGATCTaGTCGATGCATTTCTTGTGGATGGCAGCGTTACATTGCCTGCAT +
Preference number: 6 (lower is better)
Translates to: VSRLLAAVPVHLPMI*SMHFLWMAALHCLH
Trigger: ATGCAGGCAATGTAACGCTGCCATCCACAAGAAATGCATCGACAAGATCATCGGCAGATGCACTGGCACCGCGGCCAACAGCCGGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000650940.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS GCA 72 bp GTCGACTTCCACTCAGGATACATGGTCGGCTTCTTCTaGACCAGTGTTTTCCCACGCTCTGTGCTGAGCGCC +
Preference number: 6 (lower is better)
Translates to: VDFHSGYMVGFF*TSVFPRSVLSA
Trigger: GGCGCTCAGCACAGAGCGTGGGAAAACACTGGTGCAGAAGAAGCCGACCATGTATCCTGAGTGGAAGTCGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000478843.5
ENST00000487897.5
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS CAA 90 bp ATTTTGGCCTGTTTGATGGCTCCGCGGCGGTTCATCGTTGGGAACTaGGCCTCGTCCTCACTGCGCATAGACTGTTTGCAATCCACGTCC +
Preference number: 6 (lower is better)
Translates to: ILACLMAPRRFIVGN*ASSSLRIDCLQSTS
Trigger: GGACGTGGATTGCAAACAGTCTATGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCGGAGCCATCAAACAGGCCAAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000650739.1
ENST00000650940.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CAA 72 bp TGTTTGATGGCTCCGCGGCGGTTCATCGTTGGGAACTaGGCCTCGTCCTCACTGCGCATAGACTGTTTGCAA +
Preference number: 6 (lower is better)
Translates to: CLMAPRRFIVGN*ASSSLRIDCLQ
Trigger: TTGCAAACAGTCTATGCGCAGTGAGGACGAGGCCAAGTTCCCAACGATGAACCGCCGCGGAGCCATCAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000650739.1
ENST00000650940.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CAA 90 bp ACAGACCTGCCCTCCGCACTGTCATTGCATGCTATAAATTGTCCCTaGAGGACACAATCGGGCAGGCTTTGTGAAGGGGGTTGCGTGAGG +
Preference number: 6 (lower is better)
Translates to: TDLPSALSLHAINCP*RTQSGRLCEGGCVR
Trigger: CCTCACGCAACCCCCTTCACAAAGCCTGCCCGATTGTGTCCTCAAGGGACAATTTATAGCATGCAATGACAGTGCGGAGGGCAGGTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478843.5
CDS CCA 72 bp TGTGGGCATCGAACGTCGACTTCCACTCAGGATACATaGTCGGCTTCTTCTGCACCAGTGTTTTCCCACGCT +
Preference number: 6 (lower is better)
Translates to: CGHRTSTSTQDT*SASSAPVFSHA
Trigger: AGCGTGGGAAAACACTGGTGCAGAAGAAGCCGACCATGTATCCTGAGTGGAAGTCGACGTTCGATGCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000464818.1
ENST00000478843.5
ENST00000487897.5
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS CAA 72 bp CTGTTGGCCGCGGTGCCAGTGCATCTGCCGATGATCTaGTCGATGCATTTCTTGTGGATGGCAGCGTTACAT +
Preference number: 6 (lower is better)
Translates to: LLAAVPVHLPMI*SMHFLWMAALH
Trigger: ATGTAACGCTGCCATCCACAAGAAATGCATCGACAAGATCATCGGCAGATGCACTGGCACCGCGGCCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000650940.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CAA 72 bp TTGAAGCGTTCTTTCTGGAATATAGTGTCCCGGCTGTaGGCCGCGGTGCCAGTGCATCTGCCGATGATCTTG +
Preference number: 6 (lower is better)
Translates to: LKRSFWNIVSRL*AAVPVHLPMIL
Trigger: CAAGATCATCGGCAGATGCACTGGCACCGCGGCCAACAGCCGGGACACTATATTCCAGAAAGAACGCTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000650940.1
ENST00000652449.1
ENST00000654719.1
CDS CAA 90 bp CAGGTCGTTTCATCTCCCCAGACAGACCTGCCCTCCGCACTGTCATaGCATGCTATAAATTGTCCCTTGAGGACACAATCGGGCAGGCTT +
Preference number: 6 (lower is better)
Translates to: QVVSSPQTDLPSALS*HAINCPLRTQSGRL
Trigger: AAGCCTGCCCGATTGTGTCCTCAAGGGACAATTTATAGCATGCAATGACAGTGCGGAGGGCAGGTCTGTCTGGGGAGATGAAACGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478843.5
CDS CAA 72 bp GTGCACATTCATGCCGCAGTGCCTGCATTTGTAGCCTaGCTTGTTGAGGCCCCAGACAAAGTCTTTGCACAC +
Preference number: 6 (lower is better)
Translates to: VHIHAAVPAFVA*LVEAPDKVFAH
Trigger: GTGTGCAAAGACTTTGTCTGGGGCCTCAACAAGCAAGGCTACAAATGCAGGCACTGCGGCATGAATGTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464818.1
CDS CAA 72 bp CCCTCCGCACTGTCATTGCATGCTATAAATTGTCCCTaGAGGACACAATCGGGCAGGCTTTGTGAAGGGGGT +
Preference number: 6 (lower is better)
Translates to: PSALSLHAINCP*RTQSGRLCEGG
Trigger: ACCCCCTTCACAAAGCCTGCCCGATTGTGTCCTCAAGGGACAATTTATAGCATGCAATGACAGTGCGGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000478843.5
CDS CAA 72 bp GTGGATGGCAGCGTTACATTGCCTGCATTTGTAGCCTaGCTTGTTGAGGCCCCAGACAAAGTCTTTGCACAC +
Preference number: 6 (lower is better)
Translates to: VDGSVTLPAFVA*LVEAPDKVFAH
Trigger: GTGTGCAAAGACTTTGTCTGGGGCCTCAACAAGCAAGGCTACAAATGCAGGCAATGTAACGCTGCCATCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000330452.8
ENST00000394729.6
ENST00000650739.1
ENST00000650940.1
ENST00000651505.1
ENST00000652449.1
ENST00000654719.1
CDS CAA 72 bp TCATCTCCCCAGACAGACCTGCCCTCCGCACTGTCATaGCATGCTATAAATTGTCCCTTGAGGACACAATCG +
Preference number: 6 (lower is better)
Translates to: SSPQTDLPSALS*HAINCPLRTQS
Trigger: CGATTGTGTCCTCAAGGGACAATTTATAGCATGCAATGACAGTGCGGAGGGCAGGTCTGTCTGGGGAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000478843.5