RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKCB (Homo sapiens)

Ensembl gene IDs: ENSG00000166501

Ensembl transcript IDs: ENST00000321728.12, ENST00000463752.1, ENST00000466124.1, ENST00000472066.1, ENST00000482000.2, ENST00000486868.1, ENST00000487674.1, ENST00000498058.1, ENST00000498739.1, ENST00000643927.1, ENST00000645517.1, ENST00000647422.1

Found 645 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CACCAGATAAGGGCCTGTTGGTGGGCCTGGCTCAGAGATGTCTGCTaGCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGA +
Preference number: 1 (lower is better)
Translates to: HQIRACWWAWLRDVC*LATEQKAPCTFWTG
Trigger: TCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGCAGCAGACATCTCTGAGCCAGGCCCACCAACAGGCCCTTATCTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp ATTTCGCTTTCCCTGCCTGTGGGCCTCTTATCAAAGATTCCCTTCTaGCCAGCCCCACCTTGGAAAGCCCTGCCCCGTTTGTTGTGCTGG +
Preference number: 1 (lower is better)
Translates to: ISLSLPVGLLSKIPF*PAPPWKALPRLLCW
Trigger: CCAGCACAACAAACGGGGCAGGGCTTTCCAAGGTGGGGCTGGTCAGAAGGGAATCTTTGATAAGAGGCCCACAGGCAGGGAAAGCGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp AGCACACGTGGGTATGTGTGGCTAGAGTGGGGCAGGCTAAGATGCTaGTGGAGCTGTTTCCTGGGTAGGGTCCATCTCTACCATGTCCCA +
Preference number: 1 (lower is better)
Translates to: STRGYVWLEWGRLRC*WSCFLGRVHLYHVP
Trigger: TGGGACATGGTAGAGATGGACCCTACCCAGGAAACAGCTCCATCAGCATCTTAGCCTGCCCCACTCTAGCCACACATACCCACGTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 90 bp AACCACCAGATAAGGGCCTGTTGGTGGGCCTGGCTCAGAGATGTCTaGTGCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACA +
Preference number: 1 (lower is better)
Translates to: NHQIRACWWAWLRDV*CLATEQKAPCTFWT
Trigger: TGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGCAGCAGACATCTCTGAGCCAGGCCCACCAACAGGCCCTTATCTGGTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp CGAGGAGGGGGAGTCACCTGCTGCCTTAATCCTCTCAGACAGAAATaGAATTTCTCCCACCGAAGGGTTTCCTTGGGCTTCAGGGAGCTC +
Preference number: 1 (lower is better)
Translates to: RGGGVTCCLNPLRQK*NFSHRRVSLGFREL
Trigger: GAGCTCCCTGAAGCCCAAGGAAACCCTTCGGTGGGAGAAATTTCATTTCTGTCTGAGAGGATTAAGGCAGCAGGTGACTCCCCCTCCTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp TCAGTAGCAGCCCAGGTGGCTAGAAGACCTCTTTCTCTGAAAAGGTaGACTGCTGCCCATCTACTCTGCCCCCAAGAAGGCAGAATGGCC +
Preference number: 1 (lower is better)
Translates to: SVAAQVARRPLSLKR*TAAHLLCPQEGRMA
Trigger: GGCCATTCTGCCTTCTTGGGGGCAGAGTAGATGGGCAGCAGTTCACCTTTTCAGAGAAAGAGGTCTTCTAGCCACCTGGGCTGCTACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp AGGTCTCCCCTGGTCTCATCAACCCTATTTCGCTTTCCCTGCCTGTaGGCCTCTTATCAAAGATTCCCTTCTGACCAGCCCCACCTTGGA +
Preference number: 1 (lower is better)
Translates to: RSPLVSSTLFRFPCL*ASYQRFPSDQPHLG
Trigger: TCCAAGGTGGGGCTGGTCAGAAGGGAATCTTTGATAAGAGGCCCACAGGCAGGGAAAGCGAAATAGGGTTGATGAGACCAGGGGAGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp CTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTAGGTCCTaGTTGCCACCACAGTGGGGACAGCAGGGACGGTCCCCAAGCCTG +
Preference number: 1 (lower is better)
Translates to: LNLSDRTSSLLHLRS*LPPQWGQQGRSPSL
Trigger: CAGGCTTGGGGACCGTCCCTGCTGTCCCCACTGTGGTGGCAATCAGGACCTAAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp CTGACCACATCGCTGCTATGTAGGCCTCATCACAGTCTCTCGGACTaGAGGGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGA +
Preference number: 1 (lower is better)
Translates to: LTTSLLCRPHHSLSD*RDNPMAVLLQDNQG
Trigger: TCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGATGAGGCCTACATAGCAGCGATGTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp TTGTCTTTCCTCATCATCACCACACCCACCTGGGGCAGGTGGAGCTaGAGTCCTCACCTCCTATATATGACATATGAGAGAACCGAGGCA +
Preference number: 1 (lower is better)
Translates to: LSFLIITTPTWGRWS*SPHLLYMTYERTEA
Trigger: TGCCTCGGTTCTCTCATATGTCATATATAGGAGGTGAGGACTCCAGCTCCACCTGCCCCAGGTGGGTGTGGTGATGATGAGGAAAGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp AGCCTCTTGTCTTTCCTCATCATCACCACACCCACCTGGGGCAGGTaGAGCTGGAGTCCTCACCTCCTATATATGACATATGAGAGAACC +
Preference number: 1 (lower is better)
Translates to: SLLSFLIITTPTWGR*SWSPHLLYMTYERT
Trigger: GGTTCTCTCATATGTCATATATAGGAGGTGAGGACTCCAGCTCCACCTGCCCCAGGTGGGTGTGGTGATGATGAGGAAAGACAAGAGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp GTCCTTGCAAGCCTCTTGTCTTTCCTCATCATCACCACACCCACCTaGGGCAGGTGGAGCTGGAGTCCTCACCTCCTATATATGACATAT +
Preference number: 1 (lower is better)
Translates to: VLASLLSFLIITTPT*GRWSWSPHLLYMTY
Trigger: ATATGTCATATATAGGAGGTGAGGACTCCAGCTCCACCTGCCCCAGGTGGGTGTGGTGATGATGAGGAAAGACAAGAGGCTTGCAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 90 bp GCTAATAAAGGAATCTGTATGATGCTCCGACCTCTTCAGGGTCCTTaGAAGCCTCTTGTCTTTCCTCATCATCACCACACCCACCTGGGG +
Preference number: 1 (lower is better)
Translates to: ANKGICMMLRPLQGP*KPLVFPHHHHTHLG
Trigger: CCCCAGGTGGGTGTGGTGATGATGAGGAAAGACAAGAGGCTTGCAAGGACCCTGAAGAGGTCGGAGCATCATACAGATTCCTTTATTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp GCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCCCAGCTaGCTGACTTTGGGCAAATTCCTTCCTCTTTCCAGATGCCAGTTT +
Preference number: 1 (lower is better)
Translates to: APCTFWTGHPGFYPS*LTLGKFLPLSRCQF
Trigger: AAACTGGCATCTGGAAAGAGGAAGGAATTTGCCCAAAGTCAGTCAGCTGGGATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 90 bp CAGGCGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATaGCTCCTCTTTAATATTGTCTGTGCATCTCTCTCCCAATCCCCA +
Preference number: 1 (lower is better)
Translates to: QALGMLLPVFTTKLE*LLFNIVCASLSQSP
Trigger: TGGGGATTGGGAGAGAGATGCACAGACAATATTAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 90 bp CTGCCCCCAAGAAGGCAGAATGGCCATGTGGAGAAATCAGATCACTaGTTAATGAAAGGAATTGACCACCGTCAGCTCGAAAATCCACCC +
Preference number: 1 (lower is better)
Translates to: LPPRRQNGHVEKSDH*LMKGIDHRQLENPP
Trigger: GGGTGGATTTTCGAGCTGACGGTGGTCAATTCCTTTCATTAAGCAGTGATCTGATTTCTCCACATGGCCATTCTGCCTTCTTGGGGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp AGCGTAAGAAGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTaGCTGATACCATCTCATGAGCAGAGTCAGAAAGAGCCCTGTGCT +
Preference number: 1 (lower is better)
Translates to: SVRRKTQDQDTPVIG*LIPSHEQSQKEPCA
Trigger: AGCACAGGGCTCTTTCTGACTCTGCTCATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCTTCTTACGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp CCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCCCAGCTGACTaGCTTTGGGCAAATTCCTTCCTCTTTCCAGATGCCAGTTTCTCA +
Preference number: 1 (lower is better)
Translates to: PALSGQDTQVFIPAD*LWANSFLFPDASFS
Trigger: TGAGAAACTGGCATCTGGAAAGAGGAAGGAATTTGCCCAAAGTCAGTCAGCTGGGATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp ATGGTTTTTATCTTCCTGAGAGCATGTCCAAGCAAAATGGGATCATaGTCCAACCACCAGATAAGGGCCTGTTGGTGGGCCTGGCTCAGA +
Preference number: 1 (lower is better)
Translates to: MVFIFLRACPSKMGS*SNHQIRACWWAWLR
Trigger: TCTGAGCCAGGCCCACCAACAGGCCCTTATCTGGTGGTTGGATCATGATCCCATTTTGCTTGGACATGCTCTCAGGAAGATAAAAACCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp GCCCGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTaGATGGTTGGGGGTGAATATGGCAGTGCAGAAAAAGAGGGAAAG +
Preference number: 1 (lower is better)
Translates to: ARKWKSTANIQLSTD*MVGGEYGSAEKEGK
Trigger: CTTTCCCTCTTTTTCTGCACTGCCATATTCACCCCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp TCTCACCAGGGAACATCAGAATGTGGGCTAATAAAGGAATCTGTATaGTGCTCCGACCTCTTCAGGGTCCTTGCAAGCCTCTTGTCTTTC +
Preference number: 1 (lower is better)
Translates to: SHQGTSECGLIKESV*CSDLFRVLASLLSF
Trigger: GAAAGACAAGAGGCTTGCAAGGACCCTGAAGAGGTCGGAGCATCATACAGATTCCTTTATTAGCCCACATTCTGATGTTCCCTGGTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp AAGCAACCATACACTTGGATACAAGCCAAGCTCCAGGCCCGGAAGTaGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTT +
Preference number: 1 (lower is better)
Translates to: KQPYTWIQAKLQARK*KSTANIQLSTDWMV
Trigger: AACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCGGGCCTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp ACTAGCAATTGCTTGGGGCAAGTCTCACCAGGGAACATCAGAATGTaGGCTAATAAAGGAATCTGTATGATGCTCCGACCTCTTCAGGGT +
Preference number: 1 (lower is better)
Translates to: TSNCLGQVSPGNIRM*ANKGICMMLRPLQG
Trigger: ACCCTGAAGAGGTCGGAGCATCATACAGATTCCTTTATTAGCCCACATTCTGATGTTCCCTGGTGAGACTTGCCCCAAGCAATTGCTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp CATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTTaGCTTGAAGTCTTACACCCCAGGCTCAACGATGGAGTTTGCATT +
Preference number: 1 (lower is better)
Translates to: HVHRESWKTRIDTYA*LEVLHPRLNDGVCI
Trigger: AATGCAAACTCCATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR TCA 90 bp GAATGGCCATGTGGAGAAATCAGATCACTGCTTAATGAAAGGAATTaGCCACCGTCAGCTCGAAAATCCACCCACAGTCTAGAATTGGGT +
Preference number: 1 (lower is better)
Translates to: EWPCGEIRSLLNERN*PPSARKSTHSLELG
Trigger: ACCCAATTCTAGACTGTGGGTGGATTTTCGAGCTGACGGTGGTCAATTCCTTTCATTAAGCAGTGATCTGATTTCTCCACATGGCCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTaGACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTTGGC +
Preference number: 1 (lower is better)
Translates to: KSPLRQAFHMLNASM*TVNPGRLELIHTLG
Trigger: GCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR GCA 90 bp ATGAGCAGAGTCAGAAAGAGCCCTGTGCTGAAAATTTTTAGCAGCTaGACTCCACGCACTGGCTTTCATTTCACATTGTATGTTGGCTTG +
Preference number: 1 (lower is better)
Translates to: MSRVRKSPVLKIFSS*TPRTGFHFTLYVGL
Trigger: CAAGCCAACATACAATGTGAAATGAAAGCCAGTGCGTGGAGTGCAGCTGCTAAAAATTTTCAGCACAGGGCTCTTTCTGACTCTGCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp GGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATaGTTGGGGGTGAATATGGCAGTGCAGAAAAAGAGGGAAAGAAAG +
Preference number: 1 (lower is better)
Translates to: GSGRVPLTSNYPQIG*LGVNMAVQKKRERK
Trigger: CTTTCTTTCCCTCTTTTTCTGCACTGCCATATTCACCCCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 90 bp ACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTaGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACAC +
Preference number: 1 (lower is better)
Translates to: TSFPHVECQHVHRES*KTRIDTYAWLEVLH
Trigger: GTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR TCA 90 bp TATTTTGAGCATGTTCTTTTCAAGGTCTGGTGCCTCCAGAACAGGTaGAATAGAGGGATTCCTCTTAGGCAAAGCAACCATACACTTGGA +
Preference number: 1 (lower is better)
Translates to: YFEHVLFKVWCLQNR*NRGIPLRQSNHTLG
Trigger: TCCAAGTGTATGGTTGCTTTGCCTAAGAGGAATCCCTCTATTTCACCTGTTCTGGAGGCACCAGACCTTGAAAAGAACATGCTCAAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 90 bp TACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGGAGTTTaGATTCACCTACACATTAATGACAAACTCTGGGTTAGTATAAGA +
Preference number: 1 (lower is better)
Translates to: YAWLEVLHPRLNDGV*IHLHINDKLWVSIR
Trigger: TCTTATACTAACCCAGAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp CCATCTCATAGAGATGCTCCAAACTACCTGAGGACATTTGGGTTCTaGAACACTGTCACTCTAGTCTCATCAGAAAATCAAACATGGATG +
Preference number: 1 (lower is better)
Translates to: PSHRDAPNYLRTFGF*NTVTLVSSENQTWM
Trigger: CATCCATGTTTGATTTTCTGATGAGACTAGAGTGACAGTGTTTCAGAACCCAAATGTCCTCAGGTAGTTTGGAGCATCTCTATGAGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp AGGCATCTTACTTCAAGGACATTTGTCAAGTTGTTAAAGTTCCCTTaGTGGTCTCTCAGAAGCCCTGGAACTTCTGGAAATCACTTGAAC +
Preference number: 1 (lower is better)
Translates to: RHLTSRTFVKLLKFP*WSLRSPGTSGNHLN
Trigger: GTTCAAGTGATTTCCAGAAGTTCCAGGGCTTCTGAGAGACCATCAAGGGAACTTTAACAACTTGACAAATGTCCTTGAAGTAAGATGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp ATCATTTGTCAATGGCCTAGTGTTTCTCCATGGTTTTTATCTTCCTaGGAGCATGTCCAAGCAAAATGGGATCATGATCCAACCACCAGA +
Preference number: 1 (lower is better)
Translates to: IICQWPSVSPWFLSS*EHVQAKWDHDPTTR
Trigger: TCTGGTGGTTGGATCATGATCCCATTTTGCTTGGACATGCTCTCAGGAAGATAAAAACCATGGAGAAACACTAGGCCATTGACAAATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 90 bp ACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATaGCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACA +
Preference number: 1 (lower is better)
Translates to: TYKEKPSKTSFPHVE*QHVHRESWKTRIDT
Trigger: TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CCA 90 bp ACTCTTTGTCGAAGTTGGAGGTGTCTCTCTTGTCTCTCTGCCAAATaGAAAGTAAACACATTAACACAGCGTAAGAAGAAAGACACAGGA +
Preference number: 1 (lower is better)
Translates to: TLCRSWRCLSCLSAK*KVNTLTQRKKKDTG
Trigger: TCCTGTGTCTTTCTTCTTACGCTGTGTTAATGTGTTTACTTTCCATTTGGCAGAGAGACAAGAGAGACACCTCCAACTTCGACAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 90 bp AATGAGGGCAAAATTAGATCCTTTATCACAGTCCAAAAATGGATCTaGACTCTGCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTA +
Preference number: 1 (lower is better)
Translates to: NEGKIRSFITVQKWI*TLLTQEPFSESCQL
Trigger: TAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGGACTGTGATAAAGGATCTAATTTTGCCCTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466124.1
3UTR CCA 90 bp CTCTTCAAAAAGCTCTGTTTCTCAGTTTCTTCTGCACTGGAAATGTaGATAGAAAAGGAAGTGGTAGAAATTCTGACTTTCCATGGAAAG +
Preference number: 1 (lower is better)
Translates to: LFKKLCFSVSSALEM*IEKEVVEILTFHGK
Trigger: CTTTCCATGGAAAGTCAGAATTTCTACCACTTCCTTTTCTATCCACATTTCCAGTGCAGAAGAAACTGAGAAACAGAGCTTTTTGAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp ATCAAGAGCCCCATTCACGTTCCCAGCTGGTCTCTAAACTTGACTTaGGGCTCCAGTATCCTCGTTGGCTCTGGCCAGGTCATCCCACCC +
Preference number: 2 (lower is better)
Translates to: IKSPIHVPSWSLNLT*GSSILVGSGQVIPP
Trigger: GGGTGGGATGACCTGGCCAGAGCCAACGAGGATACTGGAGCCCAAAGTCAAGTTTAGAGACCAGCTGGGAACGTGAATGGGGCTCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGCCCACCTGGGGCAGGTaGAGCTGGAGTCCTCACCTC +
Preference number: 2 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMPTWGR*SWSPHL
Trigger: GAGGTGAGGACTCCAGCTCCACCTGCCCCAGGTGGG...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCCTCCAGTATCCTCGTTaGCTCTGGCCAGGTCATCCC +
Preference number: 2 (lower is better)
Translates to: LQSRKHPALSGQDTQVFILQYPR*LWPGHP
Trigger: GGGATGACCTGGCCAGAGCCAACGAGGATACTGGAG...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTGCCTCCAGAACAGGTaGAATAGAGGGATTCCTCTT +
Preference number: 2 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVCLQNR*NRGIPL
Trigger: AAGAGGAATCCCTCTATTTCACCTGTTCTGGAGGCA...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp ACAGGTGAAATAGAGGGATTCCTCTTAGGCAAAGCAACCATACACTaGGATACAAGCCAAGCTCCAGGCCCGGAAGTGGAAGAGTACCGC +
Preference number: 2 (lower is better)
Translates to: TGEIEGFLLGKATIH*DTSQAPGPEVEEYR
Trigger: GCGGTACTCTTCCACTTCCGGGCCTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTTTGCCTAAGAGGAATCCCTCTATTTCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp AAGAAAATCAAGAGCCCCATTCACGTTCCCAGCTGGTCTCTAAACTaGACTTTGGGCTCCAGTATCCTCGTTGGCTCTGGCCAGGTCATC +
Preference number: 2 (lower is better)
Translates to: KKIKSPIHVPSWSLN*TLGSSILVGSGQVI
Trigger: GATGACCTGGCCAGAGCCAACGAGGATACTGGAGCCCAAAGTCAAGTTTAGAGACCAGCTGGGAACGTGAATGGGGCTCTTGATTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCGGGGCCTTGCTAGAGTaGCTGTGTTGTTTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LQSRKHPALSGQDTQVFIGALLE*LCCFRE
Trigger: CTCTCTGAAACAACACAGTCACTCTAGCAAGGCCCC...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp GAAGACTTGGGATATGCCTCTATCCTTTTTGCAACTTATAATTGTCCCCGAGCCGCCCCTCCGAGTGGCTaGACACTGGGGCCAAGATTA +
Preference number: 2 (lower is better)
Translates to: EDLGYASILFATYNCPRAAPPSG*TLGPRL
Trigger: TAATCTTGGCCCCAGTGTTCAGCCACTCGGAGGGGC...GGCTCGGGGACAATTATAAGTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATGGAGGGGGAGTCACCTaGTGCCTTAATCCTCTCAGA +
Preference number: 2 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHGGGVT*CLNPLR
Trigger: TCTGAGAGGATTAAGGCAGCAGGTGACTCCCCCTCC...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp TTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCCACAGTCTCTCGGACTaGAGGGACAACCCCATGGCT +
Preference number: 2 (lower is better)
Translates to: FWSKFMMKSLSVGVSSTGHSLSD*RDNPMA
Trigger: AGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTG...GCCTGTGGAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp GTGGGGGTCAGTTCCACAGGCTGTCTGGTGAACTCTTTGTCGAAGTaGGAGGTGTCTCTCTTGTCTCTCTGCCAAATGGAAAGTAAACAC +
Preference number: 2 (lower is better)
Translates to: VGVSSTGCLVNSLSK*EVSLLSLCQMESKH
Trigger: GTGTTTACTTTCCATTTGGCAGAGAGACAAGAGAGACACCTCCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGGAACTGACCCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp AGTTTATCAGTGGGGGTCAGTTCCACAGGCTGTCTGGTGAACTCTTaGTCGAAGTTGGAGGTGTCTCTCTTGTCTCTCTGCCAAATGGAA +
Preference number: 2 (lower is better)
Translates to: SLSVGVSSTGCLVNS*SKLEVSLLSLCQME
Trigger: TTCCATTTGGCAGAGAGACAAGAGAGACACCTCCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGGAACTGACCCCCACTGATAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAATTAGTTCCTTTCTCCTaGGTTCCCTCCTCAGTTCCC +
Preference number: 2 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQLVPFS*VPSSVP
Trigger: GGGAACTGAGGAGGGAACTCAGGAGAAAGGAACTAA...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTGAGGACAGAGAAGGATaGACTGCAGGAGACTTTGCC +
Preference number: 2 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLEDREG*TAGDFA
Trigger: GGCAAAGTCTCCTGCAGTTCATCCTTCTCTGTCCTC...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCGACGGTCCCCAAGCCTaGAGCAAGAAGAGGACAGAG +
Preference number: 2 (lower is better)
Translates to: HVKTVALIQGGLLILLTSDGPQA*SKKRTE
Trigger: CTCTGTCCTCTTCTTGCTTCAGGCTTGGGGACCGTC...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCCAGAGAAGGATGAACTaGAGGAGACTTTGCCTAAGC +
Preference number: 2 (lower is better)
Translates to: LQSRKHPALSGQDTQVFIQRRMN*RRLCLS
Trigger: GCTTAGGCAAAGTCTCCTGCAGTTCATCCTTCTCTG...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCCCCTCCTTCTCTTACTaGCTAAACTTGTCAGATAGA +
Preference number: 2 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLPSFSY*LNLSDR
Trigger: TCTATCTGACAAGTTTAGGCAGTAAGAGAAGGAGGG...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTAAAAGTGAGGGAGCTTTaGTCCGATTTCCCTCCTTCT +
Preference number: 2 (lower is better)
Translates to: RSACYFRCSQQSSNASSLKVREL*SDFPPS
Trigger: AGAAGGAGGGAAATCGGAGCAAAGCTCCCTCACTTT...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATaGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACG +
Preference number: 2 (lower is better)
Translates to: MLNASMCTVNPGRLE*IHTLGLKSYTPGST
Trigger: CGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CAA 90 bp TGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTTGGCTaGAAGTCTTACACCCCAGGCTCAACGATGGAGTTTGCATTCACC +
Preference number: 2 (lower is better)
Translates to: CTVNPGRLELIHTLG*KSYTPGSTMEFAFT
Trigger: GGTGAATGCAAACTCCATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCCAGAAACTACAACACTaGGGTAGCACCCAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLQKLQH*GSTQAG
Trigger: ACCAGCTTGGGTGCTACCTCAGTGTTGTAGTTTCTG...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCCTTCACCTTAGGTCCTaGTTGCCACCACAGTGGGGA +
Preference number: 2 (lower is better)
Translates to: HVKTVALIQGGLLILLTSLHLRS*LPPQWG
Trigger: TCCCCACTGTGGTGGCAATCAGGACCTAAGGTGAAG...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGGGGCCCCTAAAGGTCTaGGAACTCCAGGACAGTGTG +
Preference number: 2 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQGPLKV*ELQDSV
Trigger: CACACTGTCCTGGAGTTCTCAGACCTTTAGGGGCCC...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATTTGAATGCCAGCATGTaGACCGTGAATCCTGGAAGA +
Preference number: 2 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHLNASM*TVNPGR
Trigger: TCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTCAAGAAGGTCCTTGTTaGTATGGCCCTGTCCTCTCT +
Preference number: 2 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLQEGPC*YGPVLS
Trigger: AGAGAGGACAGGGCCATAGCAACAAGGACCTTCTTG...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAACAGGACTTGCTTTTATaGACTTTGTCCTGTGGGCAG +
Preference number: 2 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQQDLLL*TLSCGQ
Trigger: CTGCCCACAGGACAAAGTCCATAAAAGCAAGTCCTG...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTTTGGATGGTTGGGGGTaGATATGGCAGTGCAGAAAA +
Preference number: 2 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLLDGWG*IWQCRK
Trigger: TTTTCTGCACTGCCATATTCACCCCCAACCATCCAA...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp CCATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCTGGCTCAGAGATGTCTaGTGCCTTGCTACAGAGCAG +
Preference number: 2 (lower is better)
Translates to: PCENSSTHPRRVINSTDLWLRDV*CLATEQ
Trigger: CTGCTCTGTAGCAAGGCAGCAGACATCTCTGAGCCA...GAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATCTATTTCGCTTTCCCTaGCTGTGGGCCTCTTATCAA +
Preference number: 2 (lower is better)
Translates to: GQPHGCFITRQPGKKALYLFRFP*LWASYQ
Trigger: TTGATAAGAGGCCCACAGGCAGGGAAAGCGAAATAG...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAAGGATCTCTCATTGCTaGGTTCACTCTCCTTTGCAA +
Preference number: 2 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQRISHC*VHSPLQ
Trigger: TTGCAAAGGAGAGTGAACCCAGCAATGAGAGATCCT...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp TTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCAGATACGCCAGTCATTaGGTGGCTGATACCATCTCA +
Preference number: 2 (lower is better)
Translates to: FWSKFMMKSLSVGVSSTGRYASH*VADTIS
Trigger: TGAGATGGTATCAGCCACCCAATGACTGGCGTATCT...GCCTGTGGAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp AGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTaGGGGGTGAATATGGCAGTGCAGAAAAAGAGGGAAAGAAAGCAG +
Preference number: 2 (lower is better)
Translates to: SGRVPLTSNYPQIGW*GVNMAVQKKRERKQ
Trigger: CTGCTTTCTTTCCCTCTTTTTCTGCACTGCCATATTCACCCCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTTTGTTAAAGTTCCCTTaGTGGTCTCTCAGAAGCCCT +
Preference number: 2 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLLLKFP*WSLRSP
Trigger: AGGGCTTCTGAGAGACCATCAAGGGAACTTTAACAA...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATTTCCTGATTTTTACCTaGCCACATCGCTGCTATGTA +
Preference number: 2 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHFLIFT*PHRCYV
Trigger: TACATAGCAGCGATGTGGTCAGGTAAAAATCAGGAA...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAGTGCACCGTGAATCCTaGAAGACTAGAATTGATACA +
Preference number: 2 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQVHRES*KTRIDT
Trigger: TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCAC...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATAAGCAACCATACACTTaGATACAAGCCAAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GQPHGCFITRQPGKKALYKQPYT*IQAKLQ
Trigger: CTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTT...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp GCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTaGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTG +
Preference number: 2 (lower is better)
Translates to: ATHTKKSPLRQAFHM*NASMCTVNPGRLEL
Trigger: CAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR-3UTR TCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCTACATACGCTTGGCTTaGAGTCTTACACCCCAGGCT +
Preference number: 2 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECYIRLA*SLTPQA
Trigger: AGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTA...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR-3UTR GCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAGGGAGCTCACAAAGCTaGTTGCTAGAAAGAATATTT +
Preference number: 2 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQGSSQS*LLERIF
Trigger: AAATATTCTTTCTAGCAAGCAGCTTTGTGAGCTCCC...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCTCTGAAAAGGTGAACTaGTGCCCATCTACTCTGCCC +
Preference number: 2 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECSEKVN*CPSTLP
Trigger: GGGCAGAGTAGATGGGCAGCAGTTCACCTTTTCAGA...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGATTTTCTCTCCCCATTaGGTCTACTTAGCTGACATG +
Preference number: 2 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMIFSPH*VYLADM
Trigger: CATGTCAGCTAAGTAGACCCAATGGGGAGAGAAAAT...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATATAAGGGCCTGTTGGTaGGCCTGGCTCAGAGATGTC +
Preference number: 2 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYIRACW*AWLRDV
Trigger: GACATCTCTGAGCCAGGCCCACCAACAGGCCCTTAT...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTGAAGTGCTTTTAGATTaGGACCGTCTAAAAGCACAT +
Preference number: 2 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLEVLLD*DRLKAH
Trigger: ATGTGCTTTTAGACGGTCTCAATCTAAAAGCACTTC...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCTTACTAGCAATTGCTTaGGGCAAGTCTCACCAGGGA +
Preference number: 2 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECLLAIA*GKSHQG
Trigger: TCCCTGGTGAGACTTGCCCCAAGCAATTGCTAGTAA...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp GAGGCATCTTACTTCAAGGACATTTGTCAAGTTGTTAAAGTTCCCTaGATGGTCTCTCAGAAGCCCTGGAACTTCTGGAAATCACTTGAA +
Preference number: 2 (lower is better)
Translates to: EASYFKDICQVVKVP*MVSQKPWNFWKSLE
Trigger: TTCAAGTGATTTCCAGAAGTTCCAGGGCTTCTGAGAGACCATCAAGGGAACTTTAACAACTTGACAAATGTCCTTGAAGTAAGATGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGTATCCACAGATTGGATaGTTGGGGGTGAATATGGCA +
Preference number: 2 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQYPQIG*LGVNMA
Trigger: TGCCATATTCACCCCCAACCATCCAATCTGTGGATA...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCGGAGGGACAACCCCATaGCTGTTTTATTACAAGACA +
Preference number: 2 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECGGTTP*LFYYKT
Trigger: TGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCC...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGTTAGGTAGAGCGTCCTaGAGAAAACCATTCAGTAGC +
Preference number: 2 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQLGRAS*RKPFSS
Trigger: GCTACTGAATGGTTTTCTCCAGGACGCTCTACCTAA...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCTGCACTCCACGCACTaGCTTTCATTTCACATTGTA +
Preference number: 2 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECLHSTH*LSFHIV
Trigger: TACAATGTGAAATGAAAGCCAGTGCGTGGAGTGCAG...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGGGAAGACTTGGGATATaGCTCTATCCTTTTTGCAAC +
Preference number: 2 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQGRLGI*LYPFCN
Trigger: GTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTCC...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGGAGAAATCAGATCACTaGTTAATGAAAGGAATTGAC +
Preference number: 2 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMEKSDH*LMKGID
Trigger: GTCAATTCCTTTCATTAAGCAGTGATCTGATTTCTC...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGATCATTTGTCAATaGCCTAGTGTTTCTCCATGG +
Preference number: 2 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECQIICQ*PSVSPW
Trigger: CCATGGAGAAACACTAGGCCATTGACAAATGATCTG...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp AATGACAAACTCTGGGTTAGTATAAGAGAAGCCAGCAAATTCATTTaGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTC +
Preference number: 2 (lower is better)
Translates to: NDKLWVSIREASKFI*VQVHDEEFISGGQF
Trigger: GAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAATGAATTTGCTGGCTTCTCTTATACTAACCCAGAGTTTGTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR TCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCCAGAAACTTTACTCTaGGGCAAAACAATGGAATTG +
Preference number: 2 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQPETLL*GKTMEL
Trigger: CAATTCCATTGTTTTGCCTCAGAGTAAAGTTTCTGG...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR GCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATGAGAGTGGTGCCAAATaGCCTTTTCAAGTAGTTTGG +
Preference number: 2 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYESGAK*PFQVVW
Trigger: CCAAACTACTTGAAAAGGGCATTTGGCACCACTCTC...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CCA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATCAATTATCCACAGATTaGATGGTTGGGGGTGAATAT +
Preference number: 2 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNQLSTD*MVGGEY
Trigger: ATATTCACCCCCAACCATCCAATCTGTGGATAATTG...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 90 bp AAAATGGATCTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAGTaGTCAGCTAAGACAGTTACAATAATTGAATCGAAGAAACAAAAA +
Preference number: 2 (lower is better)
Translates to: KMDLNSAHPRTILRK*SAKTVTIIESKKQK
Trigger: TTTTTGTTTCTTCGATTCAATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466124.1
3UTR-3UTR CCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATGTTTGTAATTATTTGTaGAATGAAGGAAGACTTGGG +
Preference number: 2 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYVCNYL*NEGRLG
Trigger: CCCAAGTCTTCCTTCATTCCACAAATAATTACAAAC...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp TCCCTGCCTGTGGGCCTCTTATCAAAGATTCCCTTCTaGCCAGCCCCACCTTGGAAAGCCCTGCCCCGTTTG +
Preference number: 3 (lower is better)
Translates to: SLPVGLLSKIPF*PAPPWKALPRL
Trigger: CAAACGGGGCAGGGCTTTCCAAGGTGGGGCTGGTCAGAAGGGAATCTTTGATAAGAGGCCCACAGGCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp AGGGCCTGTTGGTGGGCCTGGCTCAGAGATGTCTGCTaGCTTGCTACAGAGCAGAAAGCACCCTGCACTTTC +
Preference number: 3 (lower is better)
Translates to: RACWWAWLRDVC*LATEQKAPCTF
Trigger: GAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGCAGCAGACATCTCTGAGCCAGGCCCACCAACAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp GGGGCAGGTGGAGCTGGAGTCCTCACCTCCTATATATaGCATATGAGAGAACCGAGGCACAAGCAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: GAGGAGVLTSYI*HMREPRHKQAG
Trigger: CCCTGCCTGCTTGTGCCTCGGTTCTCTCATATGTCATATATAGGAGGTGAGGACTCCAGCTCCACCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp ATAAGGGCCTGTTGGTGGGCCTGGCTCAGAGATGTCTaGTGCCTTGCTACAGAGCAGAAAGCACCCTGCACT +
Preference number: 3 (lower is better)
Translates to: IRACWWAWLRDV*CLATEQKAPCT
Trigger: AGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGCAGCAGACATCTCTGAGCCAGGCCCACCAACAGGCCCTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp GCCCAGGTGGCTAGAAGACCTCTTTCTCTGAAAAGGTaGACTGCTGCCCATCTACTCTGCCCCCAAGAAGGC +
Preference number: 3 (lower is better)
Translates to: AQVARRPLSLKR*TAAHLLCPQEG
Trigger: GCCTTCTTGGGGGCAGAGTAGATGGGCAGCAGTTCACCTTTTCAGAGAAAGAGGTCTTCTAGCCACCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp GAACTGAACTGTGTTAGGGCCCCTAAAGGTCTGAGAACTCCAGGACAGTGTGTGCCCCCAAGAAGGTCCTaGTTGCTATGGCCCTGTCCT +
Preference number: 3 (lower is better)
Translates to: ELNCVRAPKGLRTPGQCVPPRRS*LLWPCP
Trigger: AGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGG...CACACACTGTCCTGGAGTTCTCAGACCTTTAGGGGCCCTAACACAGTTCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp TCAGATAGAACTTCAAGTTTGCTTCACCTTAGGTCCTaGTTGCCACCACAGTGGGGACAGCAGGGACGGTCC +
Preference number: 3 (lower is better)
Translates to: SDRTSSLLHLRS*LPPQWGQQGRS
Trigger: GGACCGTCCCTGCTGTCCCCACTGTGGTGGCAATCAGGACCTAAGGTGAAGCAAACTTGAAGTTCTATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp CCACCTTGGAAAGCCCTGCCCCGTTTGTTGTGCTGGTaGTGGCTAATGCTTCAGATAACCACATGGTCCAGA +
Preference number: 3 (lower is better)
Translates to: PPWKALPRLLCW*WLMLQITTWSR
Trigger: TCTGGACCATGTGGTTATCTGAAGCATTAGCCATCACCAGCACAACAAACGGGGCAGGGCTTTCCAAGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp GATGTCTGCTGCCTTGCTACAGAGCAGAAAGCACCCTaGACTTTCTGGACAGGACACCCAGGTTTTTATCCC +
Preference number: 3 (lower is better)
Translates to: DVCCLATEQKAP*TFWTGHPGFYP
Trigger: GGGATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGCAGCAGACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp CTCATCATCACCACACCCACCTGGGGCAGGTGGAGCTaGAGTCCTCACCTCCTATATATGACATATGAGAGA +
Preference number: 3 (lower is better)
Translates to: LIITTPTWGRWS*SPHLLYMTYER
Trigger: TCTCTCATATGTCATATATAGGAGGTGAGGACTCCAGCTCCACCTGCCCCAGGTGGGTGTGGTGATGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTACCAAGAAGGTCCTTGTaGCTATGGCCCTGTCCTCTC +
Preference number: 3 (lower is better)
Translates to: RSACYFRCSQQSSNASSLPRRSL*LWPCPL
Trigger: GAGAGGACAGGGCCATAGCAACAAGGACCTTCTTGG...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp GAAGACTTGGGATATGCCTCTATCCTTTTTGCAACTTATAATTGTCCCCGAGCCGCTCCAGTATCCTCGTaGGCTCTGGCCAGGTCATCC +
Preference number: 3 (lower is better)
Translates to: EDLGYASILFATYNCPRAAPVSS*ALARSS
Trigger: GGATGACCTGGCCAGAGCCAACGAGGATACTGGAGC...GGCTCGGGGACAATTATAAGTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp ATCTTCCTGAGAGCATGTCCAAGCAAAATGGGATCATaGTCCAACCACCAGATAAGGGCCTGTTGGTGGGCC +
Preference number: 3 (lower is better)
Translates to: IFLRACPSKMGS*SNHQIRACWWA
Trigger: GGCCCACCAACAGGCCCTTATCTGGTGGTTGGATCATGATCCCATTTTGCTTGGACATGCTCTCAGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp AGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTaGTACCATCTCATGAGCAGAGTCAGAAAGAGCCCT +
Preference number: 3 (lower is better)
Translates to: RHRTKIRQSLGG*YHLMSRVRKSP
Trigger: AGGGCTCTTTCTGACTCTGCTCATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp TATGAGAGAACCGAGGCACAAGCAGGCAGGGTGGCTTaGCCAAGATTTCAGTGGGTTCCTGATTTTTACCTG +
Preference number: 3 (lower is better)
Translates to: YERTEAQAGRVA*PRFQWVPDFYL
Trigger: CAGGTAAAAATCAGGAACCCACTGAAATCTTGGGCAAGCCACCCTGCCTGCTTGTGCCTCGGTTCTCTCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp GGAATCTGTATGATGCTCCGACCTCTTCAGGGTCCTTaGAAGCCTCTTGTCTTTCCTCATCATCACCACACC +
Preference number: 3 (lower is better)
Translates to: GICMMLRPLQGP*KPLVFPHHHHT
Trigger: GGTGTGGTGATGATGAGGAAAGACAAGAGGCTTGCAAGGACCCTGAAGAGGTCGGAGCATCATACAGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp TCGCTGCTATGTAGGCCTCATCACAGTCTCTCGGACTaGAGGGACAACCCCATGGCTGTTTTATTACAAGAC +
Preference number: 3 (lower is better)
Translates to: SLLCRPHHSLSD*RDNPMAVLLQD
Trigger: GTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGATGAGGCCTACATAGCAGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp TCTTTCCTCATCATCACCACACCCACCTGGGGCAGGTaGAGCTGGAGTCCTCACCTCCTATATATGACATAT +
Preference number: 3 (lower is better)
Translates to: SFLIITTPTWGR*SWSPHLLYMTY
Trigger: ATATGTCATATATAGGAGGTGAGGACTCCAGCTCCACCTGCCCCAGGTGGGTGTGGTGATGATGAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATGAGATGTCTGCTGCCTaGCTACAGAGCAGAAAGCAC +
Preference number: 3 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHEMSAA*LQSRKH
Trigger: GTGCTTTCTGCTCTGTAGCAAGGCAGCAGACATCTC...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAGGGCTGCAGCCAAAGTaGCCTCAGATTATAAAGGCC +
Preference number: 3 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQGLQPK*PQIIKA
Trigger: GGCCTTTATAATCTGAGGCAACTTTGGCTGCAGCCC...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp TCTGGACAGGACACCCAGGTTTTTATCCCAGCTGACTaGCTTTGGGCAAATTCCTTCCTCTTTCCAGATGCC +
Preference number: 3 (lower is better)
Translates to: SGQDTQVFIPAD*LWANSFLFPDA
Trigger: GGCATCTGGAAAGAGGAAGGAATTTGCCCAAAGTCAGTCAGCTGGGATAAAAACCTGGGTGTCCTGTCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp GTTTATCAGTGGGGGTCAGTTCCACAGGCTGTCTGGTaGACTCTTTGTCGAAGTTGGAGGTGTCTCTCTTGT +
Preference number: 3 (lower is better)
Translates to: VYQWGSVPQAVW*TLCRSWRCLSC
Trigger: ACAAGAGAGACACCTCCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGGAACTGACCCCCACTGATAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp CTGCTGCCCATCTACTCTGCCCCCAAGAAGGCAGAATaGCCATGTGGAGAAATCAGATCACTGCTTAATGAA +
Preference number: 3 (lower is better)
Translates to: LLPIYSAPKKAE*PCGEIRSLLNE
Trigger: TTCATTAAGCAGTGATCTGATTTCTCCACATGGCCATTCTGCCTTCTTGGGGGCAGAGTAGATGGGCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGATACATACGCTTGGCTaGAAGTCTTACACCCCAGGC +
Preference number: 3 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVIHTLG*KSYTPG
Trigger: GCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTAT...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR-3UTR CAA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCCCACAGATTGGATGGTaGGGGGTGAATATGGCAGTG +
Preference number: 3 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLPQIGW*GVNMAV
Trigger: CACTGCCATATTCACCCCCAACCATCCAATCTGTGG...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTaGTATGGCCCTGTCCTCTCTTCAAAAAGCTCTGTT +
Preference number: 3 (lower is better)
Translates to: TDLPLIPQEGPC*YGPVLSSKSSV
Trigger: AACAGAGCTTTTTGAAGAGAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp TACACTTGGATACAAGCCAAGCTCCAGGCCCGGAAGTaGAAGAGTACCGCTAACATCCAATTATCCACAGAT +
Preference number: 3 (lower is better)
Translates to: YTWIQAKLQARK*KSTANIQLSTD
Trigger: ATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCGGGCCTGGAGCTTGGCTTGTATCCAAGTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTaGCTGATACCATCTCATGAGCAGAGTCAGAAAGAG +
Preference number: 3 (lower is better)
Translates to: RKTQDQDTPVIG*LIPSHEQSQKE
Trigger: CTCTTTCTGACTCTGCTCATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCAAAGCAACCATACACTaGGATACAAGCCAAGCTCCA +
Preference number: 3 (lower is better)
Translates to: LQSRKHPALSGQDTQVFIKATIH*DTSQAP
Trigger: TGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTTT...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTTTGCTTTTATGGACTTaGTCCTGTGGGCAGATCCCC +
Preference number: 3 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLLLLWT*SCGQIP
Trigger: GGGGATCTGCCCACAGGACAAAGTCCATAAAAGCAA...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATCTGACCAGCCCCACCTaGGAAAGCCCTGCCCCGTTT +
Preference number: 3 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYLTSPT*ESPAPF
Trigger: AAACGGGGCAGGGCTTTCCAAGGTGGGGCTGGTCAG...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCCAGGGAAGAAGGCCTaGTATTCCCTAGTGCCCTGC +
Preference number: 3 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQPGKKA*YSLVPC
Trigger: GCAGGGCACTAGGGAATACAAGGCCTTCTTCCCTGG...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGTGGTCCAGACAGGACTaGCTTTTATGGACTTTGTCC +
Preference number: 3 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMWSRQD*LLWTLS
Trigger: GGACAAAGTCCATAAAAGCAAGTCCTGTCTGGACCA...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp GAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATaGCAGCATGTGCACCGTGAATCCTGGAAGACTAGA +
Preference number: 3 (lower is better)
Translates to: EKPSKTSFPHVE*QHVHRESWKTR
Trigger: TCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CCA 72 bp CGTGAATCCTGGAAGACTAGAATTGATACATACGCTTaGCTTGAAGTCTTACACCCCAGGCTCAACGATGGA +
Preference number: 3 (lower is better)
Translates to: RESWKTRIDTYA*LEVLHPRLNDG
Trigger: TCCATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATTCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR-3UTR CAA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCATACATACGCTTGGCTaGAAGTCTTACACCCCAGGC +
Preference number: 3 (lower is better)
Translates to: HVKTVALIQGGLLILLTSIHTLG*KSYTPG
Trigger: GCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTAT...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCTTTGTCTTGTCCTGCTaGCTGTTAGCCTGTGGGGTG +
Preference number: 3 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECFVLSC*LLACGV
Trigger: CACCCCACAGGCTAACAGCAAGCAGGACAAGACAAA...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAATGGGTTCACTCTCCTTaGCAAAAGACCTTTTACAAG +
Preference number: 3 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQWVHSP*QKTFYK
Trigger: CTTGTAAAAGGTCTTTTGCAAAGGAGAGTGAACCCA...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp TTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCACATTGTATGTTGGCTaGGGGATAGAAATGTGGTGG +
Preference number: 3 (lower is better)
Translates to: FWSKFMMKSLSVGVSSTGTLYVG*GIEMWW
Trigger: CCACCACATTTCTATCCCCAAGCCAACATACAATGT...GCCTGTGGAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp CCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTaGAAGACTAGAATTGATACATACGCTTGGCTTGAA +
Preference number: 3 (lower is better)
Translates to: PHVECQHVHRES*KTRIDTYAWLE
Trigger: TTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CCA 72 bp AGAGTACCGCTAACATCCAATTATCCACAGATTGGATaGTTGGGGGTGAATATGGCAGTGCAGAAAAAGAGG +
Preference number: 3 (lower is better)
Translates to: RVPLTSNYPQIG*LGVNMAVQKKR
Trigger: CCTCTTTTTCTGCACTGCCATATTCACCCCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp TTCCTCTTTCCAGATGCCAGTTTCTCAACAATAAAGTaGGGGAGCTTTGCTCCGATTTCCCTCCTTCTCTTA +
Preference number: 3 (lower is better)
Translates to: FLFPDASFSTIK*GSFAPISLLLL
Trigger: TAAGAGAAGGAGGGAAATCGGAGCAAAGCTCCCTCACTTTATTGTTGAGAAACTGGCATCTGGAAAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp TGTGGAGAAATCAGATCACTGCTTAATGAAAGGAATTaGCCACCGTCAGCTCGAAAATCCACCCACAGTCTA +
Preference number: 3 (lower is better)
Translates to: CGEIRSLLNERN*PPSARKSTHSL
Trigger: TAGACTGTGGGTGGATTTTCGAGCTGACGGTGGTCAATTCCTTTCATTAAGCAGTGATCTGATTTCTCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp GAGGGAGCTTTGCTCCGATTTCCCTCCTTCTCTTACTaGCTAAACTTGTCAGATAGAACTTCAAGTTTGCTT +
Preference number: 3 (lower is better)
Translates to: EGALLRFPSFSY*LNLSDRTSSLL
Trigger: AAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGAGGGAAATCGGAGCAAAGCTCCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp GTCAGAAAGAGCCCTGTGCTGAAAATTTTTAGCAGCTaGACTCCACGCACTGGCTTTCATTTCACATTGTAT +
Preference number: 3 (lower is better)
Translates to: VRKSPVLKIFSS*TPRTGFHFTLY
Trigger: ATACAATGTGAAATGAAAGCCAGTGCGTGGAGTGCAGCTGCTAAAAATTTTCAGCACAGGGCTCTTTCTGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp CTTGAAGTCTTACACCCCAGGCTCAACGATGGAGTTTaGATTCACCTACACATTAATGACAAACTCTGGGTT +
Preference number: 3 (lower is better)
Translates to: LEVLHPRLNDGV*IHLHINDKLWV
Trigger: AACCCAGAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTGTAAGACTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp TGGAAGAGTACCGCTAACATCCAATTATCCACAGATTaGATGGTTGGGGGTGAATATGGCAGTGCAGAAAAA +
Preference number: 3 (lower is better)
Translates to: WKSTANIQLSTD*MVGGEYGSAEK
Trigger: TTTTTCTGCACTGCCATATTCACCCCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTGCTAGAGTGACTGTGTaGTTTCAGAGAGTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLARVTV*FQRVVP
Trigger: TGGCACCACTCTCTGAAACAACACAGTCACTCTAGC...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCGTTGTTAAAGTTCCCTaGATGGTCTCTCAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECVVKVP*MVSQKP
Trigger: GGGCTTCTGAGAGACCATCAAGGGAACTTTAACAAC...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCGAACTGCAGGAGACTTaGCCTAAGCAGAAATCCAAA +
Preference number: 3 (lower is better)
Translates to: HVKTVALIQGGLLILLTSELQET*PKQKSK
Trigger: TTTGGATTTCTGCTTAGGCAAAGTCTCCTGCAGTTC...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR GCA 72 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTaGACCGTGAATCCTGGAAGACTAGAATTGATACAT +
Preference number: 3 (lower is better)
Translates to: LRQAFHMLNASM*TVNPGRLELIH
Trigger: ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR GCA 72 bp GATCCTTTATCACAGTCCAAAAATGGATCTGAACTCTaGTCACCCAAGAACCATTCTCAGAAAGTTGTCAGC +
Preference number: 3 (lower is better)
Translates to: DPLSQSKNGSEL*SPKNHSQKVVS
Trigger: GCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGGACTGTGATAAAGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466124.1
3UTR-3UTR CAA 90 bp TTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCGTTGAGATCATTTCTTaGAGGTTGATAGCATCTGAA +
Preference number: 3 (lower is better)
Translates to: FWSKFMMKSLSVGVSSTGVEIIS*RLIASE
Trigger: TTCAGATGCTATCAACCTCAAAGAAATGATCTCAAC...GCCTGTGGAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGGGAATGAAGGAAGACTaGGGATATGCCTCTATCCTT +
Preference number: 3 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQGMKED*GYASIL
Trigger: AAGGATAGAGGCATATCCCAAGTCTTCCTTCATTCC...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp AGAGATGCTCCAAACTACCTGAGGACATTTGGGTTCTaGAACACTGTCACTCTAGTCTCATCAGAAAATCAA +
Preference number: 3 (lower is better)
Translates to: RDAPNYLRTFGF*NTVTLVSSENQ
Trigger: TTGATTTTCTGATGAGACTAGAGTGACAGTGTTTCAGAACCCAAATGTCCTCAGGTAGTTTGGAGCATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp ACTTCAAGGACATTTGTCAAGTTGTTAAAGTTCCCTTaGTGGTCTCTCAGAAGCCCTGGAACTTCTGGAAAT +
Preference number: 3 (lower is better)
Translates to: TSRTFVKLLKFP*WSLRSPGTSGN
Trigger: ATTTCCAGAAGTTCCAGGGCTTCTGAGAGACCATCAAGGGAACTTTAACAACTTGACAAATGTCCTTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CCA 72 bp CGAAGTTGGAGGTGTCTCTCTTGTCTCTCTGCCAAATaGAAAGTAAACACATTAACACAGCGTAAGAAGAAA +
Preference number: 3 (lower is better)
Translates to: RSWRCLSCLSAK*KVNTLTQRKKK
Trigger: TTTCTTCTTACGCTGTGTTAATGTGTTTACTTTCCATTTGGCAGAGAGACAAGAGAGACACCTCCAACTTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATCCTGGAAGACTAGAATaGATACATACGCTTGGCTTG +
Preference number: 3 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHPGRLE*IHTLGL
Trigger: CAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGG...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR TCA 72 bp CAACTTATAATTGTCCCCGAGCCAGAAACTTTACTCTaGGGCAAAACAATGGAATTGATTCCCATTGATCCT +
Preference number: 3 (lower is better)
Translates to: QLIIVPEPETLL*GKTMELIPIDP
Trigger: AGGATCAATGGGAATCAATTCCATTGTTTTGCCTCAGAGTAAAGTTTCTGGCTCGGGGACAATTATAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCTCAGACACAGTAGTTTaGACATTGTCTGTTCATTTG +
Preference number: 3 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECSDTVV*TLSVHL
Trigger: CAAATGAACAGACAATGTCAAAACTACTGTGTCTGA...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CCA 72 bp AAGCTCTGTTTCTCAGTTTCTTCTGCACTGGAAATGTaGATAGAAAAGGAAGTGGTAGAAATTCTGACTTTC +
Preference number: 3 (lower is better)
Translates to: KLCFSVSSALEM*IEKEVVEILTF
Trigger: GAAAGTCAGAATTTCTACCACTTCCTTTTCTATCCACATTTCCAGTGCAGAAGAAACTGAGAAACAGAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR TCA 72 bp AAAATTAGATCCTTTATCACAGTCCAAAAATGGATCTaGACTCTGCTCACCCAAGAACCATTCTCAGAAAGT +
Preference number: 3 (lower is better)
Translates to: KIRSFITVQKWI*TLLTQEPFSES
Trigger: ACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGGACTGTGATAAAGGATCTAATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466124.1
3UTR GCA 72 bp ATTTCTTGGAGAGAAACAATAAACAGGGTCCTCATCTaGTTCTTCACTAGTGTATTTCCAGTGCTAAGAATA +
Preference number: 3 (lower is better)
Translates to: ISWRETINRVLI*FFTSVFPVLRI
Trigger: TATTCTTAGCACTGGAAATACACTAGTGAAGAAGCAGATGAGGACCCTGTTTATTGTTTCTCTCCAAGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CAGGACACGGCAGGCGAGGAGGGGGAGTCACCTGCTGCCTTAATCCTCTCAGACGTGGCACAGGCACATTaGAGTACTCGCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QDTAGEEGESPAALILSDVAQAH*STRLPP
Trigger: AGGAGGAAGGCGAGTACTTCAATGTGCCTGTGCCAC...GTCTGAGAGGATTAAGGCAGCAGGTGACTCCCCCTCCTCGCCTGCCGTGTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTCAGCATGGGGCTCCTTaGACCGGCCGACTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVQHGAP*TGRLAG
Trigger: TCCAGCAAGTCGGCCGGTTCAAGGAGCCCCATGCTG...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAGGGCGAAGCGCACGGTaGTCTCCTCGCCCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGGRSAR*SPRPRS
Trigger: CGAGCGAGGGCGAGGAGAGCACCGTGCGCTTCGCCC...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTAGGGCCTGGATGTAGATaGGGCCGCGGCGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: RSACYFRCSQQSSNASSLGPGCR*GRGAPC
Trigger: ACACGGAGCGCCGCGGCCGCATCTACATCCAGGCCC...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp CCTAGTGCCCTGCACATTCCCGGGCTGCAGCCAAAGTaGCCTCAGATTATAAAGGCCAGGGGGTCGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PSALHIPGLQPK*PQIIKARGSVR
Trigger: CCTTACCGACCCCCTGGCCTTTATAATCTGAGGCAACTTTGGCTGCAGCCCGGGAATGTGCAGGGCACTAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCCGGGTCAGCCATCTTaGGCGCGGGGAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTPGQPS*ARGAGA
Trigger: GGCTCCGGCTCCCCGCGCGCAAGATGGCTGACCCGG...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTGGGCGAAGCGCACGGTaGTCTCCTCGCCCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLGRSAR*SPRPRS
Trigger: CGAGCGAGGGCGAGGAGAGCACCGTGCGCTTCGCCC...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CAGGACACGGCAGGCGAGGAGGGGGAGTCACCTGCTGCCTTAATCCTCTCAGACCTCAGAGATGTCTGCTaGCTTGCTACAGAGCAGAAA +
Preference number: 4 (lower is better)
Translates to: QDTAGEEGESPAALILSDLRDVC*LATEQK
Trigger: TTTCTGCTCTGTAGCAAGGCAGCAGACATCTCTGAG...GTCTGAGAGGATTAAGGCAGCAGGTGACTCCCCCTCCTCGCCTGCCGTGTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTATTCCCTAGTGCCCTaGACATTCCCGGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVYSLVP*TFPGCS
Trigger: GCTGCAGCCCGGGAATGTGCAGGGCACTAGGGAATA...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GCAAAGCAACCATACACTTGGATACAAGCCAAGCTCCAGGCCCGGAAGTGGAAGTGGCACTGGAATCCCTaGTTCCCGAAGCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: AKQPYTWIQAKLQARKWKWHWNP*FPKPQM
Trigger: CATCTGGGGCTTCGGGAAGCAGGGATTCCAGTGCCA...CTTCCACTTCCGGGCCTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTACACGTGGGTATGTGTaGCTAGAGTGGGGCAGGCTA +
Preference number: 4 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVTRGYV*LEWGRL
Trigger: TAGCCTGCCCCACTCTAGCCACACATACCCACGTGT...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTTGGGTCCCGAAGCCCCAGATaGAGTCGGTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RKWKSTANIQLSTDWMVGSRSPR*SRCSGC
Trigger: GCAGCCACTGCACCGACTTCATCTGGGGCTTCGGGA...CCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCCGGGTCAGCCATCTTaGGCGCGGGGAGCCGGAGCC +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQPGQPS*ARGAGA
Trigger: GGCTCCGGCTCCCCGCGCGCAAGATGGCTGACCCGG...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGGCCGGAGGGCGCCTTTaGGGGCGAAGCGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQAGGRL*GRSARC
Trigger: GCACCGTGCGCTTCGCCCGCAAAGGCGCCCTCCGGC...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGGGGCCTGGATGTAGATaGGGCCGCGGCGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTGPGCR*GRGAPC
Trigger: ACACGGAGCGCCGCGGCCGCATCTACATCCAGGCCC...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGGGGGTCATCGGAGGCTaGACCCTTGTCAGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMGVIGG*TLVSAR
Trigger: CCTGGCGCTGACAAGGGTCCAGCCTCCGATGACCCC...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CAA 72 bp CCAGGGCCCTTTGGGGGCCTTGCTAGAGTGACTGTGTaGTTTCAGAGAGTGGTGCCAAATGCCCTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: PGPFGGLARVTV*FQRVVPNALFK
Trigger: CTTGAAAAGGGCATTTGGCACCACTCTCTGAAACAACACAGTCACTCTAGCAAGGCCCCCAAAGGGCCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp CCTCTTATCAAAGATTCCCTTCTGACCAGCCCCACCTaGGAAAGCCCTGCCCCGTTTGTTGTGCTGGTGATG +
Preference number: 4 (lower is better)
Translates to: PLIKDSLLTSPT*ESPAPFVVLVM
Trigger: CATCACCAGCACAACAAACGGGGCAGGGCTTTCCAAGGTGGGGCTGGTCAGAAGGGAATCTTTGATAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp GTGGGGGTCAGTTCCACAGGCTGTCTGGTGAACTCTTaGTCGAAGTTGGAGGTGTCTCTCTTGTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VGVSSTGCLVNS*SKLEVSLLSLC
Trigger: GCAGAGAGACAAGAGAGACACCTCCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGGAACTGACCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCAGCATGGGGCTCCTTaGACCGGCCGACTTGCTGGA +
Preference number: 4 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAQHGAP*TGRLAG
Trigger: TCCAGCAAGTCGGCCGGTTCAAGGAGCCCCATGCTG...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCGGGGCCTTGCTAGAGTaGCTGTGTTGTTTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLGALLE*LCCFRE
Trigger: CTCTCTGAAACAACACAGTCACTCTAGCAAGGCCCC...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCGAGGACAGAGAAGGATaGACTGCAGGAGACTTTGCC +
Preference number: 4 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLEDREG*TAGDFA
Trigger: GGCAAAGTCTCCTGCAGTTCATCCTTCTCTGTCCTC...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCTGGCTCAGAGATGTCTaGTGCCTTGCTACAGAGCAG +
Preference number: 4 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLWLRDV*CLATEQ
Trigger: CTGCTCTGTAGCAAGGCAGCAGACATCTCTGAGCCA...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCCAGCAAACTTGGCACTaGAATCCCTGCTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLQQTWH*NPCFPK
Trigger: CTTCGGGAAGCAGGGATTCCAGTGCCAAGTTTGCTG...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTACCGTGCCACACAGGCTaGGAACATTCATCACGCAGC +
Preference number: 4 (lower is better)
Translates to: RSACYFRCSQQSSNASSLPCHTG*EHSSRS
Trigger: GCTGCGTGATGAATGTTCCCAGCCTGTGTGGCACGG...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAAGGCGGTCCATGGTCTaGAAGCAGGAGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQRRSMV*KQEWSW
Trigger: CCAGCTCCACTCCTGCTTCCAGACCATGGACCGCCT...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTACTCCAGTATCCTCGTTaGCTCTGGCCAGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: RSACYFRCSQQSSNASSLLQYPR*LWPGHP
Trigger: GGGATGACCTGGCCAGAGCCAACGAGGATACTGGAG...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTTGGGGGGACCTTGGTTCCCTaGCTGATCTTGGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RKWKSTANIQLSTDWMVGGTLVP*LILALS
Trigger: TGAGAGGGCCAAGATCAGTCAGGGAACCAAGGTCCC...CCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATGCCCCTCCGAGTGGCTaGACACTGGGGCCAAGATTA +
Preference number: 4 (lower is better)
Translates to: GQPHGCFITRQPGKKALYAPPSG*TLGPRL
Trigger: TAATCTTGGCCCCAGTGTTCAGCCACTCGGAGGGGC...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GCAAAGCAACCATACACTTGGATACAAGCCAAGCTCCAGGCCCGGAAGTGGAAGAGATGTCTGCTGCCTTaGTACAGAGCAGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: AKQPYTWIQAKLQARKWKRCLLP*YRAEST
Trigger: GGTGCTTTCTGCTCTGTAGCAAGGCAGCAGACATCT...CTTCCACTTCCGGGCCTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCGCCTGTTGGTGGGCCTaGCTCAGAGATGTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLACWWA*LRDVCC
Trigger: GCAGCAGACATCTCTGAGCCAGGCCCACCAACAGGC...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GAACTGAACTGTGTTAGGGCCCCTAAAGGTCTGAGAACTCCAGGACAGTGTGTGACTCAGGAGCACACGTaGGTATGTGTGGCTAGAGTG +
Preference number: 4 (lower is better)
Translates to: ELNCVRAPKGLRTPGQCVTQEHT*VCVARV
Trigger: CACTCTAGCCACACATACCCACGTGTGCTCCTGAGT...CACACACTGTCCTGGAGTTCTCAGACCTTTAGGGGCCCTAACACAGTTCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAGCTGGATGTGATACATaGGGTCGCCCCCATTCACGT +
Preference number: 4 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGAGCDT*GRPHSR
Trigger: ACGTGAATGGGGGCGACCTCATGTATCACATCCAGC...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp GAACTGAACTGTGTTAGGGCCCCTAAAGGTCTGAGAACTCCAGGACAGTGTGTGAAGCTTTCCACATGTTaGATGCCAGCATGTGCACCG +
Preference number: 4 (lower is better)
Translates to: ELNCVRAPKGLRTPGQCVKLSTC*MPACAP
Trigger: CGGTGCACATGCTGGCATTCAACATGTGGAAAGCTT...CACACACTGTCCTGGAGTTCTCAGACCTTTAGGGGCCCTAACACAGTTCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATGGGCCCCTAAAGGTCTaGGAACTCCAGGACAGTGTG +
Preference number: 4 (lower is better)
Translates to: GQPHGCFITRQPGKKALYGPLKV*ELQDSV
Trigger: CACACTGTCCTGGAGTTCTCAGACCTTTAGGGGCCC...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATCATGCACGTTCTTCTaGCGGAGGGCGCCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTSCTFF*RRAPLR
Trigger: CCGCAAAGGCGCCCTCCGGCAGAAGAACGTGCATGA...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTTGGCACTGGAATCCCTaGTTCCCGAAGCCCCAGATG +
Preference number: 4 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAWHWNP*FPKPQM
Trigger: CATCTGGGGCTTCGGGAAGCAGGGATTCCAGTGCCA...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGACTCCCCTTCAAAGGGTaGCTGCCCAGCCAACATTTC +
Preference number: 4 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGLPFKG*LPSQHF
Trigger: GAAATGTTGGCTGGGCAGGCACCCTTTGAAGGGGAG...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGCACCTTGGAAAGCCCTaGCCCGTTTGTTGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVHLGKP*PVCCAG
Trigger: ACCAGCACAACAAACGGGGCAGGGCTTTCCAAGGTG...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GAACTGAACTGTGTTAGGGCCCCTAAAGGTCTGAGAACTCCAGGACAGTGTGTGTCTGAAAAGGTGAACTaGTGCCCATCTACTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ELNCVRAPKGLRTPGQCVSEKVN*CPSTLP
Trigger: GGGCAGAGTAGATGGGCAGCAGTTCACCTTTTCAGA...CACACACTGTCCTGGAGTTCTCAGACCTTTAGGGGCCCTAACACAGTTCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCACCGTGCCACACAGGCTaGGAACATTCATCACGCAGC +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSPCHTG*EHSSRS
Trigger: GCTGCGTGATGAATGTTCCCAGCCTGTGTGGCACGG...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAATAAGGGCCTGTTGGTaGGCCTGGCTCAGAGATGTC +
Preference number: 4 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQIRACW*AWLRDV
Trigger: GACATCTCTGAGCCAGGCCCACCAACAGGCCCTTAT...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTGCTAAGAATAGTGCCTaGCACACAGTAGGTTGTTTG +
Preference number: 4 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVAKNSA*HTVGCL
Trigger: CAAACAACCTACTGTGTGCCAGGCACTATTCTTAGC...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGATCACCACACCCACCTaGGGCAGGTGGAGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTITTPT*GRWSWS
Trigger: ACTCCAGCTCCACCTGCCCCAGGTGGGTGTGGTGAT...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCTTACTAGCAATTGCTTaGGGCAAGTCTCACCAGGGA +
Preference number: 4 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLLLAIA*GKSHQG
Trigger: TCCCTGGTGAGACTTGCCCCAAGCAATTGCTAGTAA...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTTCCCGAAGCCCCAGATaGAGTCGGTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVSRSPR*SRCSGC
Trigger: GCAGCCACTGCACCGACTTCATCTGGGGCTTCGGGA...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCTCATCCCCTGGTGGATaGGTCCATACAGCAGTGACC +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLSSPGG*VHTAVT
Trigger: GGTCACTGCTGTATGGACTCATCCACCAGGGGATGA...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTATACATACGCTTGGCTTaGAGTCTTACACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RSACYFRCSQQSSNASSLYIRLA*SLTPQA
Trigger: AGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTA...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GCAAAGCAACCATACACTTGGATACAAGCCAAGCTCCAGGCCCGGAAGTGGAAGTGCCCTTTGACCCCTTaGAGTGCTTTTAGATTGAGA +
Preference number: 4 (lower is better)
Translates to: AKQPYTWIQAKLQARKWKCPLTP*SAFRLR
Trigger: TCTCAATCTAAAAGCACTTCAAGGGGTCAAAGGGCA...CTTCCACTTCCGGGCCTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCACTTCACCTTAGGTCCTaGTTGCCACCACAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSLHLRS*LPPQWG
Trigger: TCCCCACTGTGGTGGCAATCAGGACCTAAGGTGAAG...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTCTTAATGAAAGGAATTaGCCACCGTCAGCTCGAAAA +
Preference number: 4 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVLNERN*PPSARK
Trigger: TTTTCGAGCTGACGGTGGTCAATTCCTTTCATTAAG...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGTGGTCATCAGCCCTTTaGAGATGGCCACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVWSSAL*RWPQLP
Trigger: AGGAAGCTGTGGCCATCTGCAAAGGGCTGATGACCA...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTTGGGGAGCAGAAAGCACCCTaGACTTTCTGGACAGGACAC +
Preference number: 4 (lower is better)
Translates to: RKWKSTANIQLSTDWMVGEQKAP*TFWTGH
Trigger: GTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTC...CCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGACGGGCGGTGAATTTGTaGTTCTTGACCTCATGCACG +
Preference number: 4 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGRAVNL*FLTSCT
Trigger: CGTGCATGAGGTCAAGAACCACAAATTCACCGCCCG...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCAATGTGACAAATTCATaGCACCGCTTGTGCACCACA +
Preference number: 4 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLNVTNS*HRLCTT
Trigger: TGTGGTGCACAAGCGGTGCCATGAATTTGTCACATT...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGAGGCGGTCCATGGTCTaGAAGCAGGAGTGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVRRSMV*KQEWSW
Trigger: CCAGCTCCACTCCTGCTTCCAGACCATGGACCGCCT...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGAGTACAGGCGGTCCATaGTCTGGAAGCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMSTGGP*SGSRSG
Trigger: TCCACTCCTGCTTCCAGACCATGGACCGCCTGTACT...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCTATCCACAGATTGGATaGTTGGGGGTGAATATGGCA +
Preference number: 4 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLYPQIG*LGVNMA
Trigger: TGCCATATTCACCCCCAACCATCCAATCTGTGGATA...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCCTCCAGGCCCGGAAGTaGAAGAGTACCGCTAACATC +
Preference number: 4 (lower is better)
Translates to: FWSKFMMKSLSVGVSSTGLQARK*KSTANI
Trigger: GATGTTAGCGGTACTCTTCCACTTCCGGGCCTGGAG...GCCTGTGGAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACACACAGTCTCTCGGACTaGAGGGACAACCCCATGGCT +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTHSLSD*RDNPMA
Trigger: AGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTG...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTAGAATTGCCATAAAGTaGTGTGTGTGTGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVRIAIK*CVCVCV
Trigger: CACACACACACACACACACCACTTTATGGCAATTCT...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp ATAGAGGGATTCCTCTTAGGCAAAGCAACCATACACTaGGATACAAGCCAAGCTCCAGGCCCGGAAGTGGAA +
Preference number: 4 (lower is better)
Translates to: IEGFLLGKATIH*DTSQAPGPEVE
Trigger: TTCCACTTCCGGGCCTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTTTGCCTAAGAGGAATCCCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp ACAGGCCTGAGTCTGCTAGGCTCCGCAGCCGTCTTCTaGGTTAAATCAAAGCAGGTCGTCATTGTGGTTAAT +
Preference number: 4 (lower is better)
Translates to: TGLSLLGSAAVF*VKSKQVVIVVN
Trigger: ATTAACCACAATGACGACCTGCTTTGATTTAACCAAGAAGACGGCTGCGGAGCCTAGCAGACTCAGGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp AGGAATCTGTATGATGCTCCGACCTCTTCAGGGTCCTaGCAAGCCTCTTGTCTTTCCTCATCATCACCACAC +
Preference number: 4 (lower is better)
Translates to: RNLYDAPTSSGS*QASCLSSSSPH
Trigger: GTGTGGTGATGATGAGGAAAGACAAGAGGCTTGCAAGGACCCTGAAGAGGTCGGAGCATCATACAGATTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGGAGTCCATACAGCAGTaGCCCACAGTGGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVESIQQ*PTVVTK
Trigger: TTTTGTGACCACTGTGGGTCACTGCTGTATGGACTC...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGACCTTGGTTCCCTGACTaGTCTTGGCCCTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGPWFPD*SWPSQI
Trigger: AATTTGAGAGGGCCAAGATCAGTCAGGGAACCAAGG...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATGGGACCTTGGTTCCCTaGCTGATCTTGGCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHGTLVP*LILALS
Trigger: TGAGAGGGCCAAGATCAGTCAGGGAACCAAGGTCCC...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGGCTGGATGTGATACATaGGGTCGCCCCCATTCACGT +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTAGCDT*GRPHSR
Trigger: ACGTGAATGGGGGCGACCTCATGTATCACATCCAGC...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCCACAGGCTGTCTGGTaGACTCTTTGTCGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAPQAVW*TLCRSW
Trigger: CCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGG...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGTGAGGTGGGCACACTaGACTCAGGAGCACACGTGG +
Preference number: 4 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVVRWAH*TQEHTW
Trigger: CCACGTGTGCTCCTGAGTTCAGTGTGCCCACCTCAC...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGCAGTCATTGGGTGGCTaGTACCATCTCATGAGCAGA +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVQSLGG*YHLMSR
Trigger: TCTGCTCATGAGATGGTATCAGCCACCCAATGACTG...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGATCATGGCACCGCTTGTaGACCACAAAGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGSWHRL*TTKQQT
Trigger: AGTTTGCTGCTTTGTGGTGCACAAGCGGTGCCATGA...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGCTCCGTGTGGTCCGTaGCACACAGGCTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVAPCGP*HTGWEH
Trigger: ATGTTCCCAGCCTGTGTGGCACGGACCACACGGAGC...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCTGGTCATCAGCCCTTTaGAGATGGCCACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FWSKFMMKSLSVGVSSTGWSSAL*RWPQLP
Trigger: AGGAAGCTGTGGCCATCTGCAAAGGGCTGATGACCA...GCCTGTGGAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACAGCAGGCAGGGTGGCTTaGCCAAGATTTCAGTGGGTT +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTAGRVA*PRFQWV
Trigger: AACCCACTGAAATCTTGGGCAAGCCACCCTGCCTGC...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCGAAAAGGTGAACTGCTaGCCATCTACTCTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: FWSKFMMKSLSVGVSSTGEKVNC*PSTLPP
Trigger: TGGGGGCAGAGTAGATGGGCAGCAGTTCACCTTTTC...GCCTGTGGAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCTCAGCCCTTTGCAGATaGCCACAGCTTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLSALCR*PQLPWT
Trigger: TGTCCAAGGAAGCTGTGGCCATCTGCAAAGGGCTGA...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCTCAGCCCTTTGCAGATaGCCACAGCTTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLSALCR*PQLPWT
Trigger: TGTCCAAGGAAGCTGTGGCCATCTGCAAAGGGCTGA...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAATTCCTGATGACTTCCTaGTCGGGAGGTGTTAGGACT +
Preference number: 4 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQFLMTS*SGGVRT
Trigger: AGTCCTAACACCTCCCGACCAGGAAGTCATCAGGAA...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGCCGCAGCCGTCTTCTTaGTTAAATCAAAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVPQPSS*LNQSRS
Trigger: CGACCTGCTTTGATTTAACCAAGAAGACGGCTGCGG...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCGATGGAGCTGTTTCCTaGGTAGGGTCCATCTCTACC +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLDGAVS*VGSIST
Trigger: GGTAGAGATGGACCCTACCCAGGAAACAGCTCCATC...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATCCCACCTGGGGCAGGTaGAGCTGGAGTCCTCACCTC +
Preference number: 4 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYPTWGR*SWSPHL
Trigger: GAGGTGAGGACTCCAGCTCCACCTGCCCCAGGTGGG...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGACGCCAGTCATTGGGTaGCTGATACCATCTCATGAG +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVTPVIG*LIPSHE
Trigger: CTCATGAGATGGTATCAGCCACCCAATGACTGGCGT...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp GCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATaGATACATACGCTTGGCTTGAAGTCTTACACCCCA +
Preference number: 4 (lower is better)
Translates to: ASMCTVNPGRLE*IHTLGLKSYTP
Trigger: TGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CAA 72 bp CCACCGTCAGCTCGAAAATCCACCCACAGTCTAGAATaGGGTGTTTATCAGGCAGAAGTTCTCTCCAAAGAC +
Preference number: 4 (lower is better)
Translates to: PPSARKSTHSLE*GVYQAEVLSKD
Trigger: GTCTTTGGAGAGAACTTCTGCCTGATAAACACCCAATTCTAGACTGTGGGTGGATTTTCGAGCTGACGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp AGTTCCACAGGCTGTCTGGTGAACTCTTTGTCGAAGTaGGAGGTGTCTCTCTTGTCTCTCTGCCAAATGGAA +
Preference number: 4 (lower is better)
Translates to: SSTGCLVNSLSK*EVSLLSLCQME
Trigger: TTCCATTTGGCAGAGAGACAAGAGAGACACCTCCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCTTACGAGGACAATaGGGACGTCCCTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTLLRGQ*GRPCRC
Trigger: ACATCGACAGGGACGTCCTCATTGTCCTCGTAAGAG...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACACTCTTACGAGGACAATaGGGACGTCCCTGTCGATGT +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTLLRGQ*GRPCRC
Trigger: ACATCGACAGGGACGTCCTCATTGTCCTCGTAAGAG...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGTACATACGCTTGGCTTaGAGTCTTACACCCCAGGCT +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMYIRLA*SLTPQA
Trigger: AGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTA...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGAAGCTTTCCACATGTTaGATGCCAGCATGTGCACCG +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMKLSTC*MPACAP
Trigger: CGGTGCACATGCTGGCATTCAACATGTGGAAAGCTT...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCGAAGTGCTTTTAGATTaGGACCGTCTAAAAGCACAT +
Preference number: 4 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLEVLLD*DRLKAH
Trigger: ATGTGCTTTTAGACGGTCTCAATCTAAAAGCACTTC...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATCAGAAACTACAACACTaGGGTAGCACCCAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: GQPHGCFITRQPGKKALYQKLQH*GSTQAG
Trigger: ACCAGCTTGGGTGCTACCTCAGTGTTGTAGTTTCTG...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCAGCAAAATGGGATCATaGTCCAACCACCAGATAAGG +
Preference number: 4 (lower is better)
Translates to: LQSRKHPALSGQDTQVFISKMGS*SNHQIR
Trigger: CCTTATCTGGTGGTTGGATCATGATCCCATTTTGCT...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGGGCAGGCTAAGATGCTaGTGGAGCTGTTTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVGRLRC*WSCFLG
Trigger: ACCCAGGAAACAGCTCCATCAGCATCTTAGCCTGCC...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CCATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCTTGCCAAGTCTATGTaGGGGTGTGGGAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PCENSSTHPRRVINSTDLLAKSM*GCGSEV
Trigger: CACCTCACTCCCACACCCTCACATAGACTTGGCAAG...GAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATTCATGCACGTTCTTCTaGCGGAGGGCGCCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHSCTFF*RRAPLR
Trigger: CCGCAAAGGCGCCCTCCGGCAGAAGAACGTGCATGA...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAATCACGCAGCGCTTGTaGACATTCATCATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSITQRL*TFIMQV
Trigger: CACCTGCATGATGAATGTGCACAAGCGCTGCGTGAT...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATCTCCCCTTCAAAGGGTaGCTGCCCAGCCAACATTTC +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHLPFKG*LPSQHF
Trigger: GAAATGTTGGCTGGGCAGGCACCCTTTGAAGGGGAG...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTTGGTCATCAGCCCTTTaGAGATGGCCACAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNSAHPRTILRKLSAKTVWSSAL*RWPQLP
Trigger: AGGAAGCTGTGGCCATCTGCAAAGGGCTGATGACCA...AACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR GCA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAGGGGCTGGATCTCTTTaGGTTCAAGTTTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGGAGSL*VQVSPN
Trigger: ATTGGGAGAAACTTGAACGCAAAGAGATCCAGCCCC...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGGGAGGGGGAGTCACCTaGTGCCTTAATCCTCTCAGA +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVGGGVT*CLNPLR
Trigger: TCTGAGAGGATTAAGGCAGCAGGTGACTCCCCCTCC...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGCTATTTCGCTTTCCCTaGCTGTGGGCCTCTTATCAA +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVLFRFP*LWASYQ
Trigger: TTGATAAGAGGCCCACAGGCAGGGAAAGCGAAATAG...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGACTTTTTGTCTTGTCCTaGTTGCTGTTAGCCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGLFVLS*LLLACG
Trigger: CCCACAGGCTAACAGCAAGCAGGACAAGACAAAAAG...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTAACCTTTTACAAGACTTaGTTCTTTGTGGCTGCTCCC +
Preference number: 4 (lower is better)
Translates to: RSACYFRCSQQSSNASSLTFYKT*FFVAAP
Trigger: GGGAGCAGCCACAAAGAAGCAAGTCTTGTAAAAGGT...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTTGGGCTCACTTCCTTCTGGTaGCACAGGCACATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: RKWKSTANIQLSTDWMVGLTSFW*HRHIEV
Trigger: TACTTCAATGTGCCTGTGCCACCAGAAGGAAGTGAG...CCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACAGGCCTCACTTCCTTCTaGTGGCACAGGCACATTGAA +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTGLTSF*WHRHIE
Trigger: TTCAATGTGCCTGTGCCACCAGAAGGAAGTGAGGCC...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGTGCCACAGAATGTCTTaGTTGTCACCCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMCHRMS*LSPHPR
Trigger: TCTGGGATGGGGTGACAACCAAGACATTCTGTGGCA...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCTGCCACAGAATGTCTTaGTTGTCACCCCATCCCAGA +
Preference number: 4 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLCHRMS*LSPHPR
Trigger: TCTGGGATGGGGTGACAACCAAGACATTCTGTGGCA...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGCCCCAGGCTCAACGATaGAGTTTGCATTCACCTACA +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMPQAQR*SLHSPT
Trigger: TGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGG...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAAGGTCCTTGTTGCTATaGCCCTGTCCTCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQRSLLL*PCPLFK
Trigger: TTTGAAGAGAGGACAGGGCCATAGCAACAAGGACCT...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCCGCTTTCCCTGCCTGTaGGCCTCTTATCAAAGATTC +
Preference number: 4 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLRFPCL*ASYQRF
Trigger: GAATCTTTGATAAGAGGCCCACAGGCAGGGAAAGCG...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGCTTGCTGTTAGCCTGTaGGGTGCTATAGGAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMLAVSL*GAIGVS
Trigger: GGAAACTCCTATAGCACCCCACAGGCTAACAGCAAG...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GAAGACTTGGGATATGCCTCTATCCTTTTTGCAACTTATAATTGTCCCCGAGCCGAGTCCATACAGCAGTaGCCCACAGTGGTCACAAAA +
Preference number: 4 (lower is better)
Translates to: EDLGYASILFATYNCPRAESIQQ*PTVVTK
Trigger: TTTTGTGACCACTGTGGGTCACTGCTGTATGGACTC...GGCTCGGGGACAATTATAAGTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCCTTGGTTCCCTGACTaGTCTTGGCCCTCTCAAATT +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTPWFPD*SWPSQI
Trigger: AATTTGAGAGGGCCAAGATCAGTCAGGGAACCAAGG...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCATTCGTTCTGAAAGCATaGCCTTGCCAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSFVLKA*PCQSCL
Trigger: AAGGCAGCTTTGGCAAGGTCATGCTTTCAGAACGAA...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAATGTGCCTTTTCGTTCTaGAAGCATGACCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQCAFSF*KHDLAK
Trigger: TTTGGCAAGGTCATGCTTTCAGAACGAAAAGGCACA...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATCAAAATCGGCAATCTTaGTGTGTCCCTCAGAATCGA +
Preference number: 4 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHQNRQS*CVPQNR
Trigger: TCGATTCTGAGGGACACATCAAGATTGCCGATTTTG...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATTTGGATGGTTGGGGGTaGATATGGCAGTGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GQPHGCFITRQPGKKALYLDGWG*IWQCRK
Trigger: TTTTCTGCACTGCCATATTCACCCCCAACCATCCAA...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTCCTCTCAGACAGAAATaGAATTTCTCCCACCGAAGG +
Preference number: 4 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLPLRQK*NFSHRR
Trigger: CCTTCGGTGGGAGAAATTTCATTTCTGTCTGAGAGG...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGACGGTCCCCAAGCCTaGAGCAAGAAGAGGACAGAG +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHDGPQA*SKKRTE
Trigger: CTCTGTCCTCTTCTTGCTTCAGGCTTGGGGACCGTC...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGAACCCCTGTATGAACTaGACTGTGTTAGGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTNPCMN*TVLGPL
Trigger: TAGGGGCCCTAACACAGTTCAGTTCATACAGGGGTT...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATATAAAGGAATCTGTATaGTGCTCCGACCTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHIKESV*CSDLFR
Trigger: CCTGAAGAGGTCGGAGCATCATACAGATTCCTTTAT...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCACTTTCTCTGAAAAGGTaGACTGCTGCCCATCTACTC +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSLSLKR*TAAHLL
Trigger: GAGTAGATGGGCAGCAGTTCACCTTTTCAGAGAAAG...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATCATGGCACCGCTTGTaGACCACAAAGCAGCAAACT +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTSWHRL*TTKQQT
Trigger: AGTTTGCTGCTTTGTGGTGCACAAGCGGTGCCATGA...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGGCCCTCTCAAATTTCTaGCGCAGTTCTTCATTGGCC +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTALSNF*RSSSLA
Trigger: GGCCAATGAAGAACTGCGGCAGAAATTTGAGAGGGC...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCTTGAATGCCAGCATGTaGACCGTGAATCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLLNASM*TVNPGR
Trigger: TCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCATTGAATGCCAGCATGTaGACCGTGAATCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSLNASM*TVNPGR
Trigger: TCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGGGGGGAGTCACCTGCTaGCTTAATCCTCTCAGACAG +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQGGVTC*LNPLRQ
Trigger: CTGTCTGAGAGGATTAAGGCAGCAGGTGACTCCCCC...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCACAGAGAAGGATGAACTaGAGGAGACTTTGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSQRRMN*RRLCLS
Trigger: GCTTAGGCAAAGTCTCCTGCAGTTCATCCTTCTCTG...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GAAGACTTGGGATATGCCTCTATCCTTTTTGCAACTTATAATTGTCCCCGAGCCCTACCATGTCCCACCTaGCCTTTTTGTCTTGTCCTG +
Preference number: 4 (lower is better)
Translates to: EDLGYASILFATYNCPRALPCPT*PFCLVL
Trigger: CAGGACAAGACAAAAAGGGCAGGTGGGACATGGTAG...GGCTCGGGGACAATTATAAGTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTTGGGTTGCTTCTTTGTGGCTaGTCCCCTGAGATAGGTAAA +
Preference number: 4 (lower is better)
Translates to: RKWKSTANIQLSTDWMVGLLLCG*SPEIGK
Trigger: TTTACCTATCTCAGGGGAGCAGCCACAAAGAAGCAA...CCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGCTGCCCATCTACTCTaGCCCCAAGAAGGCAGAATG +
Preference number: 4 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVAAHLL*PQEGRM
Trigger: CATTCTGCCTTCTTGGGGGCAGAGTAGATGGGCAGC...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACAAAGCAGCAAACTTaGCACTGGAATCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSTKQQT*HWNPCF
Trigger: GAAGCAGGGATTCCAGTGCCAAGTTTGCTGCTTTGT...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATGTGACAAATTCATaGCACCGCTTGTGCACCACA +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVNVTNS*HRLCTT
Trigger: TGTGGTGCACAAGCGGTGCCATGAATTTGTCACATT...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTAACCAGCCATCAACACTaGCTTTCTGAAGTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: RSACYFRCSQQSSNASSLTSHQH*LSEVQK
Trigger: TTTCTGAACTTCAGAAAGCCAGTGTTGATGGCTGGT...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGTACTCGCCTTCCTCCTaGCTCAGTAACTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMYSPSS*LSNLNQ
Trigger: CTGGTTTAAGTTACTGAGCCAGGAGGAAGGCGAGTA...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGATTTGGAGACAGTGTTaGTCGTCTTTTCTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVIWRQC*SSFLPG
Trigger: TCCCGGAAGAAAAGACGACCAACACTGTCTCCAAAT...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CACAGTCCAAAAATGGATCTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAGGTTTGCCTGGGTGTTTaGTCATCAGCCCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: HSPKMDLNSAHPRTILRKVCLGV*SSALCR
Trigger: TCTGCAAAGGGCTGATGACCAAACACCCAGGCAAAC...CTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGGACTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATCTTCAGATAACCACATaGTCCAGACAGGACTTGCTT +
Preference number: 4 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHLQITT*SRQDLL
Trigger: AAGCAAGTCCTGTCTGGACCATGTGGTTATCTGAAG...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp AGCAGCTGCACTCCACGCACTGGCTTTCATTTCACATaGTATGTTGGCTTGGGGATAGAAATGTGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: SSCTPRTGFHFT*YVGLGIEMWWK
Trigger: TTTCCACCACATTTCTATCCCCAAGCCAACATACAATGTGAAATGAAAGCCAGTGCGTGGAGTGCAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTGGCACAGGCACATTaGAGTACTCGCCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHVAQAH*STRLPP
Trigger: AGGAGGAAGGCGAGTACTTCAATGTGCCTGTGCCAC...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp GAAGACTTGGGATATGCCTCTATCCTTTTTGCAACTTATAATTGTCCCCGAGCCTTCGTTCTGAAAGCATaGCCTTGCCAAAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: EDLGYASILFATYNCPRAFVLKA*PCQSCL
Trigger: AAGGCAGCTTTGGCAAGGTCATGCTTTCAGAACGAA...GGCTCGGGGACAATTATAAGTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTTGTGCCTTTTCGTTCTaGAAGCATGACCTTGCCAAA +
Preference number: 4 (lower is better)
Translates to: ECQHVHRESWKTRIDTYACAFSF*KHDLAK
Trigger: TTTGGCAAGGTCATGCTTTCAGAACGAAAAGGCACA...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGCAAAATCGGCAATCTTaGTGTGTCCCTCAGAATCGA +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMQNRQS*CVPQNR
Trigger: TCGATTCTGAGGGACACATCAAGATTGCCGATTTTG...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGTGCCTCCAGAACAGGTaGAATAGAGGGATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTCLQNR*NRGIPL
Trigger: AAGAGGAATCCCTCTATTTCACCTGTTCTGGAGGCA...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATCGTTTGTTGTGCTGGTaGTGGCTAATGCTTCAGATA +
Preference number: 4 (lower is better)
Translates to: GQPHGCFITRQPGKKALYRLLCW*WLMLQI
Trigger: TATCTGAAGCATTAGCCATCACCAGCACAACAAACG...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACACTCCAGGACAGTGTGTaGGCTAAAAGGCAGGTATAT +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTLQDSV*AKRQVY
Trigger: ATATACCTGCCTTTTAGCTCACACACTGTCCTGGAG...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GAACTGAACTGTGTTAGGGCCCCTAAAGGTCTGAGAACTCCAGGACAGTGTGTGGCAAAACAATGGAATTaGTTCCCATTGATCCTAAAG +
Preference number: 4 (lower is better)
Translates to: ELNCVRAPKGLRTPGQCVAKQWN*FPLILK
Trigger: CTTTAGGATCAATGGGAATCAATTCCATTGTTTTGC...CACACACTGTCCTGGAGTTCTCAGACCTTTAGGGGCCCTAACACAGTTCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGGTTCTTGACCTCATaGACGTTCTTCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEWFLTS*TFFCRR
Trigger: CCTCCGGCAGAAGAACGTGCATGAGGTCAAGAACCA...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGTGGTTCTTGACCTCATaGACGTTCTTCTGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQWFLTS*TFFCRR
Trigger: CCTCCGGCAGAAGAACGTGCATGAGGTCAAGAACCA...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATGCTCCGTGTGGTCCGTaGCACACAGGCTGGGAACAT +
Preference number: 4 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNAPCGP*HTGWEH
Trigger: ATGTTCCCAGCCTGTGTGGCACGGACCACACGGAGC...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGCATAGAGCTCATCTGTaGCTTTTCGTTCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVHRAHL*LFVLKA
Trigger: TGCTTTCAGAACGAAAAGGCACAGATGAGCTCTATG...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCAGCAGGACTCCAAATaGCCACCAATCCACGGACTT +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQQQDSK*PPIHGL
Trigger: AAGTCCGTGGATTGGTGGGCATTTGGAGTCCTGCTG...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTCAGCAGGACTCCAAATaGCCACCAATCCACGGACTT +
Preference number: 4 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVQQDSK*PPIHGL
Trigger: AAGTCCGTGGATTGGTGGGCATTTGGAGTCCTGCTG...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCGGGAGCTCACAAAGCTaGTTGCTAGAAAGAATATTT +
Preference number: 4 (lower is better)
Translates to: LQSRKHPALSGQDTQVFIGSSQS*LLERIF
Trigger: AAATATTCTTTCTAGCAAGCAGCTTTGTGAGCTCCC...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTTGCACATTCCCGGGCTaGAGCCAAAGTTGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLCTFPG*SQSCLR
Trigger: TCTGAGGCAACTTTGGCTGCAGCCCGGGAATGTGCA...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCCTCTTCAGGGTCCTTaGAAGCCTCTTGTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVPLQGP*KPLVFP
Trigger: AGGAAAGACAAGAGGCTTGCAAGGACCCTGAAGAGG...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCCCATTTACTAGCAATTaGTTGGGGCAAGTCTCACCA +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLPFTSN*LGQVSP
Trigger: TGGTGAGACTTGCCCCAAGCAATTGCTAGTAAATGG...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GCAAAGCAACCATACACTTGGATACAAGCCAAGCTCCAGGCCCGGAAGTGGAAGGAGAAATCAGATCACTaGTTAATGAAAGGAATTGAC +
Preference number: 4 (lower is better)
Translates to: AKQPYTWIQAKLQARKWKEKSDH*LMKGID
Trigger: GTCAATTCCTTTCATTAAGCAGTGATCTGATTTCTC...CTTCCACTTCCGGGCCTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAACGGGCGGTGAATTTGTaGTTCTTGACCTCATGCACG +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVERAVNL*FLTSCT
Trigger: CGTGCATGAGGTCAAGAACCACAAATTCACCGCCCG...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAACAGCAAACTTGGCACTaGAATCCCTGCTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEQQTWH*NPCFPK
Trigger: CTTCGGGAAGCAGGGATTCCAGTGCCAAGTTTGCTG...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAAAGTGGTCACAAAACGTaGGGCTGGAGTACGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVESGHKT*GWSTCG
Trigger: TCCACACGTACTCCAGCCCCACGTTTTGTGACCACT...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATATTTGGAGACAGTGTTaGTCGTCTTTTCTTCCGGGA +
Preference number: 4 (lower is better)
Translates to: GQPHGCFITRQPGKKALYIWRQC*SSFLPG
Trigger: TCCCGGAAGAAAAGACGACCAACACTGTCTCCAAAT...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAATTTTCTCTCCCCATTaGGTCTACTTAGCTGACATG +
Preference number: 4 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQIFSPH*VYLADM
Trigger: CATGTCAGCTAAGTAGACCCAATGGGGAGAGAAAAT...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCCATGTCCAAGCAAAATaGGATCATGATCCAACCACC +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLHVQAK*DHDPTT
Trigger: GGTGGTTGGATCATGATCCCATTTTGCTTGGACATG...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GAACTGAACTGTGTTAGGGCCCCTAAAGGTCTGAGAACTCCAGGACAGTGTGTGTTTTACCGTAGAAGTTaGGAGAGAATAAGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ELNCVRAPKGLRTPGQCVFYRRS*ERISFS
Trigger: AGAGAAGCTTATTCTCTCCCAACTTCTACGGTAAAA...CACACACTGTCCTGGAGTTCTCAGACCTTTAGGGGCCCTAACACAGTTCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATTTTTTAGGTCTCCCCTaGTCTCATCAACCCTATTTC +
Preference number: 4 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHFLGLP*SHQPYF
Trigger: GAAATAGGGTTGATGAGACCAGGGGAGACCTAAAAA...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTCACAAGCAGGCAGGGTaGCTTGCCCAAGATTTCAGT +
Preference number: 4 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVHKQAG*LAQDFS
Trigger: ACTGAAATCTTGGGCAAGCCACCCTGCCTGCTTGTG...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTTGGGGCAGGTGGAGCTaGAGTCCTCACCTCCTATAT +
Preference number: 4 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLWGRWS*SPHLLY
Trigger: ATATAGGAGGTGAGGACTCCAGCTCCACCTGCCCCA...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACACCCAAGAAGGCAGAATaGCCATGTGGAGAAATCAGA +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTPKKAE*PCGEIR
Trigger: TCTGATTTCTCCACATGGCCATTCTGCCTTCTTGGG...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGCTGCACTCCACGCACTaGCTTTCATTTCACATTGTA +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMLHSTH*LSFHIV
Trigger: TACAATGTGAAATGAAAGCCAGTGCGTGGAGTGCAG...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GAAGACTTGGGATATGCCTCTATCCTTTTTGCAACTTATAATTGTCCCCGAGCCAGATACGCCAGTCATTaGGTGGCTGATACCATCTCA +
Preference number: 4 (lower is better)
Translates to: EDLGYASILFATYNCPRARYASH*VADTIS
Trigger: TGAGATGGTATCAGCCACCCAATGACTGGCGTATCT...GGCTCGGGGACAATTATAAGTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp ACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTaGAATGCCAGCATGTGCACCGTGAATCCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TKKSPLRQAFHM*NASMCTVNPGR
Trigger: TCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CAA 72 bp GTACCGCTAACATCCAATTATCCACAGATTGGATGGTaGGGGGTGAATATGGCAGTGCAGAAAAAGAGGGAA +
Preference number: 4 (lower is better)
Translates to: VPLTSNYPQIGW*GVNMAVQKKRE
Trigger: TTCCCTCTTTTTCTGCACTGCCATATTCACCCCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGAAAATGCATGCTCTTTaGTATCACGTTCGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMKMHAL*YHVRLQ
Trigger: CTGAAGGCGAACGTGATATCAAAGAGCATGCATTTT...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATCCACAGGCTGTCTGGTaGACTCTTTGTCGAAGTTGG +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHPQAVW*TLCRSW
Trigger: CCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGG...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTGTCCAAAAATGGATCTaGACTCTGCTCACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: LNSAHPRTILRKLSAKTVVQKWI*TLLTQE
Trigger: TTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGGAC...AACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR TCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGATGCTCCAAACTACCTaGGGACATTTGGGTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTMLQTT*GHLGSE
Trigger: TTCAGAACCCAAATGTCCTCAGGTAGTTTGGAGCAT...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATTTGGGTCTACTTAGCTaGCATGCTGCGGAAAATAAA +
Preference number: 4 (lower is better)
Translates to: GQPHGCFITRQPGKKALYLGLLS*HAAENK
Trigger: TTTATTTTCCGCAGCATGTCAGCTAAGTAGACCCAA...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATTAGTTCCTTTCTCCTaGGTTCCCTCCTCAGTTCCC +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVELVPFS*VPSSVP
Trigger: GGGAACTGAGGAGGGAACTCAGGAGAAAGGAACTAA...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCATCACGCAGCGCTTGTaGACATTCATCATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECITQRL*TFIMQV
Trigger: CACCTGCATGATGAATGTGCACAAGCGCTGCGTGAT...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCATTTTGGTCTTCTGTTTaGTCTCACTTTTGGGATCGG +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSFWSSV*SHFWDR
Trigger: CCGATCCCAAAAGTGAGAGCAAACAGAAGACCAAAA...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCTCATCCGGTCTCTGTTaGCATTGTTGTCAAATTTGG +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLSSGLC*HCCQIW
Trigger: CCAAATTTGACAACAATGGCAACAGAGACCGGATGA...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCCATAGAGCTCATCTGTaGCTTTTCGTTCTGAAAGCA +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLHRAHL*LFVLKA
Trigger: TGCTTTCAGAACGAAAAGGCACAGATGAGCTCTATG...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CCATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCGATGTAGTCTGGAGTaGCACAGAATGTCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: PCENSSTHPRRVINSTDLRCSLE*HRMSWL
Trigger: CAACCAAGACATTCTGTGGCACTCCAGACTACATCG...GAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCTTTCTCAGTTTCTTCTaGACTGGAAATGTGGATAGA +
Preference number: 4 (lower is better)
Translates to: LQSRKHPALSGQDTQVFIFLSFF*TGNVDR
Trigger: TCTATCCACATTTCCAGTGCAGAAGAAACTGAGAAA...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCTTCCCTCCTTACTCTTaGCAAGTCTATGTGAGGGTG +
Preference number: 4 (lower is better)
Translates to: HVKTVALIQGGLLILLTSFPPYS*QVYVRV
Trigger: CACCCTCACATAGACTTGGCAAGAGTAAGGAGGGAA...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGGGGCTGGAGTACGTGTaGATCTTAAACTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTGLEYV*ILNLCL
Trigger: CAAACACAAGTTTAAGATCCACACGTACTCCAGCCC...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAGTTTGCTCTCACTTTTaGGATCGGGAATCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSVCSHF*DRESVS
Trigger: TGAAACTGATTCCCGATCCCAAAAGTGAGAGCAAAC...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATTACTCGCCTTCCTCCTaGCTCAGTAACTTAAACCAG +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHYSPSS*LSNLNQ
Trigger: CTGGTTTAAGTTACTGAGCCAGGAGGAAGGCGAGTA...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATCATTGTTGTCAAATTTaGAGACAGTGTTGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHHCCQI*RQCWSS
Trigger: AGACGACCAACACTGTCTCCAAATTTGACAACAATG...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATAGTACAGGCGGTCCATaGTCTGGAAGCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYSTGGP*SGSRSG
Trigger: TCCACTCCTGCTTCCAGACCATGGACCGCCTGTACT...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAAGTTTGCCTGGGTGTTTaGTCATCAGCCCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEVCLGV*SSALCR
Trigger: TCTGCAAAGGGCTGATGACCAAACACCCAGGCAAAC...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGGTTTGCCTGGGTGTTTaGTCATCAGCCCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQVCLGV*SSALCR
Trigger: TCTGCAAAGGGCTGATGACCAAACACCCAGGCAAAC...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGACTCTTTGTCGAAGTTaGAGGTGTCTCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTTLCRS*RCLSCL
Trigger: GAGACAAGAGAGACACCTCCAACTTCGACAAAGAGT...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGGTGCACCGTGAATCCTaGAAGACTAGAATTGATACA +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMVHRES*KTRIDT
Trigger: TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCAC...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTAGGACTGGTGGATaGCGGGTGAAAAATCGGTCG +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHVRTGG*RVKNRS
Trigger: CGACCGATTTTTCACCCGCCATCCACCAGTCCTAAC...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp AATCCTGGAAGACTAGAATTGATACATACGCTTGGCTaGAAGTCTTACACCCCAGGCTCAACGATGGAGTTT +
Preference number: 4 (lower is better)
Translates to: NPGRLELIHTLG*KSYTPGSTMEF
Trigger: AAACTCCATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
3UTR CAA 72 bp AAGAAGAGGACAGAGAAGGATGAACTGCAGGAGACTTaGCCTAAGCAGAAATCCAAACCCCATTTTTCCCTA +
Preference number: 4 (lower is better)
Translates to: KKRTEKDELQET*PKQKSKPHFSL
Trigger: TAGGGAAAAATGGGGTTTGGATTTCTGCTTAGGCAAAGTCTCCTGCAGTTCATCCTTCTCTGTCCTCTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAATCCGATTCTTTCAGCTaGAATCTAAATGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQSDSFS*NLNVSF
Trigger: GAATGAGACATTTAGATTTCAGCTGAAAGAATCGGA...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGTTAGGTCACGGTAAATaGTGCCCTTACTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTLGHGK*CPYSVR
Trigger: TCTTACAGAGTAAGGGCATCATTTACCGTGACCTAA...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp GCAAAATTAGATCCTTTATCACAGTCCAAAAATGGATCTGAACTCTGCTCACCCAGAATACCTTGTGTGTaGATACCCGGCAGTCAGAGA +
Preference number: 4 (lower is better)
Translates to: AKLDPLSQSKNGSELCSPRIPCV*IPGSQR
Trigger: TCTCTGACTGCCGGGTATTCACACACAAGGTATTCT...GGGTGAGCAGAGTTCAGATCCATTTTTGGACTGTGATAAAGGATCTAATTTTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR TCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATCTGGTGGATGGCGGGTaGAAAATCGGTCGAAGTTTT +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHLVDGG*KIGRSF
Trigger: AAAACTTCGACCGATTTTTCACCCGCCATCCACCAG...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATAGGACATTTGGGTTCTaGAACACTGTCACTCTAGTC +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHRTFGF*NTVTLV
Trigger: GACTAGAGTGACAGTGTTTCAGAACCCAAATGTCCT...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGTTCCTGATTTTTACCTaGCCACATCGCTGCTATGTA +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTFLIFT*PHRCYV
Trigger: TACATAGCAGCGATGTGGTCAGGTAAAAATCAGGAA...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGGAAAGAGCCCTGTGCTaGAAATTTTTAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVERALC*KFLAAA
Trigger: TGCAGCTGCTAAAAATTTTCAGCACAGGGCTCTTTC...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAAGGGGCTGGATCTCTTTaGGTTCAAGTTTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEGAGSL*VQVSPN
Trigger: ATTGGGAGAAACTTGAACGCAAAGAGATCCAGCCCC...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCGAGAGTGGTGCCAAATaGCCTTTTCAAGTAGTTTGG +
Preference number: 4 (lower is better)
Translates to: HVKTVALIQGGLLILLTSESGAK*PFQVVW
Trigger: CCAAACTACTTGAAAAGGGCATTTGGCACCACTCTC...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCAAAGTGAGGGAGCTTTaGTCCGATTTCCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECKVREL*SDFPPS
Trigger: AGAAGGAGGGAAATCGGAGCAAAGCTCCCTCACTTT...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAACTTCCTCTTTCCAGATaGCAGTTTCTCAACAATAAA +
Preference number: 4 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQLPLSR*QFLNNK
Trigger: TTTATTGTTGAGAAACTGGCATCTGGAAAGAGGAAG...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATCAAGAAGGTCCTTGTTaGTATGGCCCTGTCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHQEGPC*YGPVLS
Trigger: AGAGAGGACAGGGCCATAGCAACAAGGACCTTCTTG...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACAGGAAGACTTGGGATATaGCTCTATCCTTTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTGRLGI*LYPFCN
Trigger: GTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTCC...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGTTAAGGATCTCTCATTaGTGGGTTCACTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTLRISH*WVHSPL
Trigger: CAAAGGAGAGTGAACCCAGCAATGAGAGATCCTTAA...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGATGTCAGTTAAGAATTaGCATAAAGTGGTGTGTGTG +
Preference number: 4 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVMSVKN*HKVVCV
Trigger: CACACACACCACTTTATGGCAATTCTTAACTGACAT...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGGGGCTGGAGTACGTGTaGATCTTAAACTTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVGLEYV*ILNLCL
Trigger: CAAACACAAGTTTAAGATCCACACGTACTCCAGCCC...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATAGTGGTCACAAAACGTaGGGCTGGAGTACGTGTGGA +
Preference number: 4 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYSGHKT*GWSTCG
Trigger: TCCACACGTACTCCAGCCCCACGTTTTGTGACCACT...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCTCACTTCCTTCTGGTaGCACAGGCACATTGAAGTA +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQLTSFW*HRHIEV
Trigger: TACTTCAATGTGCCTGTGCCACCAGAAGGAAGTGAG...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATGGCCTCACTTCCTTCTaGTGGCACAGGCACATTGAA +
Preference number: 4 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYGLTSF*WHRHIE
Trigger: TTCAATGTGCCTGTGCCACCAGAAGGAAGTGAGGCC...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGAATCGTCAGCCCTTTGCAGATaGCCACAGCTTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: PRTILRKLSAKTVTIIESSALCR*PQLPWT
Trigger: TGTCCAAGGAAGCTGTGGCCATCTGCAAAGGGCTGA...CGATTCAATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATCCCCAGGCTCAACGATaGAGTTTGCATTCACCTACA +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHPQAQR*SLHSPT
Trigger: TGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGG...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATCAATTATCCACAGATTaGATGGTTGGGGGTGAATAT +
Preference number: 4 (lower is better)
Translates to: GQPHGCFITRQPGKKALYQLSTD*MVGGEY
Trigger: ATATTCACCCCCAACCATCCAATCTGTGGATAATTG...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CCATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCAAGCAACCATACACTTaGATACAAGCCAAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PCENSSTHPRRVINSTDLKQPYT*IQAKLQ
Trigger: CTGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTT...GAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAACAGGACTTGCTTTTATaGACTTTGTCCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEQDLLL*TLSCGQ
Trigger: CTGCCCACAGGACAAAGTCCATAAAAGCAAGTCCTG...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCGGTAAAATGTCTCTATaGAGTTCCCTCCTTACTCTT +
Preference number: 4 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLGKMSL*SSLLTL
Trigger: AAGAGTAAGGAGGGAACTCCATAGAGACATTTTACC...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATAGGATCTCTCATTGCTaGGTTCACTCTCCTTTGCAA +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHRISHC*VHSPLQ
Trigger: TTGCAAAGGAGAGTGAACCCAGCAATGAGAGATCCT...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATGGAGGGACAACCCCATaGCTGTTTTATTACAAGACA +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHGGTTP*LFYYKT
Trigger: TGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCC...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATGCCCAAGATTTCAGTaGGTTCCTGATTTTTACCTG +
Preference number: 4 (lower is better)
Translates to: HVECQHVHRESWKTRIDTCPRFQ*VPDFYL
Trigger: CAGGTAAAAATCAGGAACCCACTGAAATCTTGGGCA...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATTTTCACATTGTATGTTaGCTTGGGGATAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHFHIVC*LGDRNV
Trigger: CACATTTCTATCCCCAAGCCAACATACAATGTGAAA...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp TTGCTCCGATTTCCCTCCTTCTCTTACTGCCTAAACTaGTCAGATAGAACTTCAAGTTTGCTTCACCTTAGG +
Preference number: 4 (lower is better)
Translates to: LLRFPSFSYCLN*SDRTSSLLHLR
Trigger: CCTAAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGAGGGAAATCGGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCATCCGATTCTTTCAGCTaGAATCTAAATGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSSDSFS*NLNVSF
Trigger: GAATGAGACATTTAGATTTCAGCTGAAAGAATCGGA...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCATCCCAAATCTCTACTaGCAGTCTTCTGTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: HVKTVALIQGGLLILLTSIPNLY*QSSVFV
Trigger: GACAAAGACAGAAGACTGTCAGTAGAGATTTGGGAT...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp AAAATGGATCTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAAATGCATGCTCTTTaGTATCACGTTCGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KMDLNSAHPRTILRKLSAKMHAL*YHVRLQ
Trigger: CTGAAGGCGAACGTGATATCAAAGAGCATGCATTTT...AGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR GCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACCGATGGCAATTTCTaGAGCGTAAAATACAGCATG +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHTDGNF*SVKYSM
Trigger: CATGCTGTATTTTACGCTGCAGAAATTGCCATCGGT...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATCGATGTAGTCTGGAGTaGCACAGAATGTCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHRCSLE*HRMSWL
Trigger: CAACCAAGACATTCTGTGGCACTCCAGACTACATCG...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp GCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGGGGCTGGATCTCTTTaGGTTCAAGTTTCTCCCAAT +
Preference number: 4 (lower is better)
Translates to: AHPRTILRKLSAKTVTIIGAGSL*VQVSPN
Trigger: ATTGGGAGAAACTTGAACGCAAAGAGATCCAGCCCC...AATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR GCA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCTCAACGATGGAGTTTaGATTCACCTACACATTAAT +
Preference number: 4 (lower is better)
Translates to: ECQHVHRESWKTRIDTYALNDGV*IHLHIN
Trigger: ATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAG...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTTTTCCACATGTTGAATaGCAGCATGTGCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVFPHVE*QHVHRE
Trigger: TTCACGGTGCACATGCTGGCATTCAACATGTGGAAA...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATTGTTTCAGAGAGTGGTaGCAAATGCCCTTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHCFREW*QMPFSS
Trigger: ACTTGAAAAGGGCATTTGGCACCACTCTCTGAAACA...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp TACTTCAAGGACATTTGTCAAGTTGTTAAAGTTCCCTaGATGGTCTCTCAGAAGCCCTGGAACTTCTGGAAA +
Preference number: 4 (lower is better)
Translates to: YFKDICQVVKVP*MVSQKPWNFWK
Trigger: TTTCCAGAAGTTCCAGGGCTTCTGAGAGACCATCAAGGGAACTTTAACAACTTGACAAATGTCCTTGAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp CTGTTAAGGATCTCTCATTGCTGGGTTCACTCTCCTTaGCAAAAGACCTTTTACAAGACTTGCTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: LLRISHCWVHSP*QKTFYKTCFFV
Trigger: CACAAAGAAGCAAGTCTTGTAAAAGGTCTTTTGCAAAGGAGAGTGAACCCAGCAATGAGAGATCCTTAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAAATCCCAAATCTCTACTaGCAGTCTTCTGTCTTTGTC +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEIPNLY*QSSVFV
Trigger: GACAAAGACAGAAGACTGTCAGTAGAGATTTGGGAT...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCAAAATGCATGCTCTTTaGTATCACGTTCGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECKMHAL*YHVRLQ
Trigger: CTGAAGGCGAACGTGATATCAAAGAGCATGCATTTT...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR TCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCCAGAAACTTTACTCTaGGGCAAAACAATGGAATTG +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVPETLL*GKTMEL
Trigger: CAATTCCATTGTTTTGCCTCAGAGTAAAGTTTCTGG...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGATTTCAGTGGGTTCCTaGTTTTTACCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQISVGS*FLPDHI
Trigger: GATGTGGTCAGGTAAAAATCAGGAACCCACTGAAAT...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATTACCGGAAAAATGCATaGTCTTTGATATCACGTTCG +
Preference number: 4 (lower is better)
Translates to: MLNASMCTVNPGRLELIHYRKNA*SLISRS
Trigger: CGAACGTGATATCAAAGAGCATGCATTTTTCCGGTA...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp AACTCTGCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACATACCGGAAAAATGCATaGTCTTTGATATCACGTTCG +
Preference number: 4 (lower is better)
Translates to: NSAHPRTILRKLSAKTVTYRKNA*SLISRS
Trigger: CGAACGTGATATCAAAGAGCATGCATTTTTCCGGTA...TGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR GCA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCTACCGGAAAAATGCATaGTCTTTGATATCACGTTCG +
Preference number: 4 (lower is better)
Translates to: HVKTVALIQGGLLILLTSYRKNA*SLISRS
Trigger: CGAACGTGATATCAAAGAGCATGCATTTTTCCGGTA...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCAACGATGGAGTTTaGATTCACCTACACATTAAT +
Preference number: 4 (lower is better)
Translates to: LNASMCTVNPGRLELIHTLNDGV*IHLHIN
Trigger: ATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAG...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTAAAATTTTTAGCAGCTaGACTCCACGCACTGGCTTT +
Preference number: 4 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVKIFSS*TPRTGF
Trigger: AAAGCCAGTGCGTGGAGTGCAGCTGCTAAAAATTTT...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAAACCAGCCATCAACACTaGCTTTCTGAAGTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVETSHQH*LSEVQK
Trigger: TTTCTGAACTTCAGAAAGCCAGTGTTGATGGCTGGT...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGAGAAGAACAGACCGATaGCAATTTCTGCAGCGTAAA +
Preference number: 4 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQRRTDR*QFLQRK
Trigger: TTTACGCTGCAGAAATTGCCATCGGTCTGTTCTTCT...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCAGAAGAACAGACCGATaGCAATTTCTGCAGCGTAAA +
Preference number: 4 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECRRTDR*QFLQRK
Trigger: TTTACGCTGCAGAAATTGCCATCGGTCTGTTCTTCT...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTACTCTTTGTCGAAGTTaGAGGTGTCTCTCTTGTCTC +
Preference number: 4 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLTLCRS*RCLSCL
Trigger: GAGACAAGAGAGACACCTCCAACTTCGACAAAGAGT...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGATTAATGACAAACTCTaGGTTAGTATAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMINDKL*VSIREA
Trigger: GGCTTCTCTTATACTAACCCAGAGTTTGTCATTAAT...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCATTAATGACAAACTCTaGGTTAGTATAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLINDKL*VSIREA
Trigger: GGCTTCTCTTATACTAACCCAGAGTTTGTCATTAAT...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp GCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGCTACTTACAGCTTTTaGCTTATAAGGGGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: AHPRTILRKLSAKTVTIIATYSF*LIRGLD
Trigger: ATCCAGCCCCCTTATAAGCCAAAAGCTGTAAGTAGC...AATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CCA 90 bp CACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGAAGGCAGTCAGAGAGAATaGGCTACTTACAGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: HPRTILRKLSAKTVTIIEGSQRE*ATYSFW
Trigger: CCAAAAGCTGTAAGTAGCCCATTCTCTCTGACTGCC...TTCAATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATTTAGGTAGAGCGTCCTaGAGAAAACCATTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHLGRAS*RKPFSS
Trigger: GCTACTGAATGGTTTTCTCCAGGACGCTCTACCTAA...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR TCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATTTAGGTCACGGTAAATaGTGCCCTTACTCTGTAAGA +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHLGHGK*CPYSVR
Trigger: TCTTACAGAGTAAGGGCATCATTTACCGTGACCTAA...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR GCA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTACCGATGGCAATTTCTaGAGCGTAAAATACAGCATG +
Preference number: 4 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLTDGNF*SVKYSM
Trigger: CATGCTGTATTTTACGCTGCAGAAATTGCCATCGGT...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GAAGACTTGGGATATGCCTCTATCCTTTTTGCAACTTATAATTGTCCCCGAGCCAATATACCGGAAAAATaGATGCTCTTTGATATCACG +
Preference number: 4 (lower is better)
Translates to: EDLGYASILFATYNCPRANIPEK*MLFDIT
Trigger: CGTGATATCAAAGAGCATGCATTTTTCCGGTATATT...GGCTCGGGGACAATTATAAGTTGCAAAAAGGATAGAGGCATATCCCAAGTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTAATGGATCTGAACTCTaGTCACCCAAGAACCATTCT +
Preference number: 4 (lower is better)
Translates to: AHPRTILRKLSAKTVTIINGSEL*SPKNHS
Trigger: AGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATT...AATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR GCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGACAACAAAGCTCGAATaGCTCCTCTTTAATATTGTC +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVTTKLE*LLFNIV
Trigger: GACAATATTAAAGAGGAGGCATTCGAGCTTTGTTGT...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTTGCTCTCACTTTTaGGATCGGGAATCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHVCSHF*DRESVS
Trigger: TGAAACTGATTCCCGATCCCAAAAGTGAGAGCAAAC...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAACATTGTTGTCAAATTTaGAGACAGTGTTGGTCGTCT +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEHCCQI*RQCWSS
Trigger: AGACGACCAACACTGTCTCCAAATTTGACAACAATG...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp ATCCTTTATCACAGTCCAAAAATGGATCTGAACTCTGCTCACCCAAGAACCATTACTAAGCTGGGCCAATaGAAAATGTCCATCTTAGTA +
Preference number: 4 (lower is better)
Translates to: ILYHSPKMDLNSAHPRTITKLGQ*KMSILV
Trigger: TACTAAGATGGACATTTTCCATTGGCCCAGCTTAGT...AATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGGACTGTGATAAAGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CCA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATATGGACTTTGTCCTGTaGGCAGATCCCCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNMDFVL*ADPQRK
Trigger: TTTTCTCTGGGGATCTGCCCACAGGACAAAGTCCAT...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
3UTR CAA 72 bp CTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAGTaGTCAGCTAAGACAGTTACAATAATTGAATCGAAG +
Preference number: 4 (lower is better)
Translates to: LNSAHPRTILRK*SAKTVTIIESK
Trigger: CTTCGATTCAATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR TCA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATTTGTTAAAGTTCCCTTaGTGGTCTCTCAGAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNLLKFP*WSLRSP
Trigger: AGGGCTTCTGAGAGACCATCAAGGGAACTTTAACAA...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CCAAAAATGGATCTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAGTTGTCAAATATACCGGAAAAATaGATGCTCTTTGATATCACG +
Preference number: 4 (lower is better)
Translates to: PKMDLNSAHPRTILRKLSNIPEK*MLFDIT
Trigger: CGTGATATCAAAGAGCATGCATTTTTCCGGTATATT...TGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR GCA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATTTTCCACATGTTGAATaGCAGCATGTGCACCGTGAA +
Preference number: 4 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNFPHVE*QHVHRE
Trigger: TTCACGGTGCACATGCTGGCATTCAACATGTGGAAA...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATCCCTCCTTCTCTTACTaGCTAAACTTGTCAGATAGA +
Preference number: 4 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYPSFSY*LNLSDR
Trigger: TCTATCTGACAAGTTTAGGCAGTAAGAGAAGGAGGG...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTGGGTTCACTCTCCTTTaGAAAAGACCTTTTACAAGA +
Preference number: 4 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLGFTLL*KRPFTR
Trigger: TCTTGTAAAAGGTCTTTTGCAAAGGAGAGTGAACCC...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATGTGCACCGTGAATCCTaGAAGACTAGAATTGATACA +
Preference number: 4 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYVHRES*KTRIDT
Trigger: TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCAC...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGAGCAGGTCGTCATTGTaGTTAATAACATTTGAATAC +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVSRSSL*LITFEY
Trigger: GTATTCAAATGTTATTAACCACAATGACGACCTGCT...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATCAGATCATTTGTCAATaGCCTAGTGTTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYQIICQ*PSVSPW
Trigger: CCATGGAGAAACACTAGGCCATTGACAAATGATCTG...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CCA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGGTTTGTAATTATTTGTaGAATGAAGGAAGACTTGGG +
Preference number: 4 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVVCNYL*NEGRLG
Trigger: CCCAAGTCTTCCTTCATTCCACAAATAATTACAAAC...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATTTTTGGTCTTCTGTTTaGTCTCACTTTTGGGATCGG +
Preference number: 4 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNFWSSV*SHFWDR
Trigger: CCGATCCCAAAAGTGAGAGCAAACAGAAGACCAAAA...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATTCATCCGGTCTCTGTTaGCATTGTTGTCAAATTTGG +
Preference number: 4 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNSSGLC*HCCQIW
Trigger: CCAAATTTGACAACAATGGCAACAGAGACCGGATGA...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR GCA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAAAATATACCGGAAAAATaGATGCTCTTTGATATCACG +
Preference number: 4 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVENIPEK*MLFDIT
Trigger: CGTGATATCAAAGAGCATGCATTTTTCCGGTATATT...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CCA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTTCAGAAAATCAAACATaGATGCAACTTGGCAATGAA +
Preference number: 4 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLSENQT*MQLGNE
Trigger: TTCATTGCCAAGTTGCATCCATGTTTGATTTTCTGA...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS GCA 90 bp TACCCACAGAGTCACCCGCCTTCCTCCCTGCCTCTGTACCCCAGGTaGAAACTCCCAGCCACAGGCGGGTGCCCAAGAGTCTTCCGCCTT +
Preference number: 5 (lower is better)
Translates to: YPQSHPPSSLPLYPR*KLPATGGCPRVFRL
Trigger: AAGGCGGAAGACTCTTGGGCACCCGCCTGTGGCTGGGAGTTTGCACCTGGGGTACAGAGGCAGGGAGGAAGGCGGGTGACTCTGTGGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498739.1
CDS-3UTR CAA 90 bp CGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTTGGGGCCGGGTCAGCCATCTaGCGCGCGGGGAGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: RKWKSTANIQLSTDWMVGAGSAI*RAGSRS
Trigger: GCTCCGGCTCCCCGCGCGCAAGATGGCTGACCCGGC...CCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTGCCGGGTCAGCCATCTaGCGCGCGGGGAGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAAGSAI*RAGSRS
Trigger: GCTCCGGCTCCCCGCGCGCAAGATGGCTGACCCGGC...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CAGGACACGGCAGGCGAGGAGGGGGAGTCACCTGCTGCCTTAATCCTCTCAGACGAGATGTCTGCTGCCTaGCTACAGAGCAGAAAGCAC +
Preference number: 5 (lower is better)
Translates to: QDTAGEEGESPAALILSDEMSAA*LQSRKH
Trigger: GTGCTTTCTGCTCTGTAGCAAGGCAGCAGACATCTC...GTCTGAGAGGATTAAGGCAGCAGGTGACTCCCCCTCCTCGCCTGCCGTGTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTCTGACCAGCCCCACCTaGGAAAGCCCTGCCCCGTTT +
Preference number: 5 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVLTSPT*ESPAPF
Trigger: AAACGGGGCAGGGCTTTCCAAGGTGGGGCTGGTCAG...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp TTTTGGTCCAAGTTCATGATGAAGAGTTTATCAGTGGGGGTCAGTTCCACAGGCTGCCGGAGGGCGCCTTaGCGGGCGAAGCGCACGGTG +
Preference number: 5 (lower is better)
Translates to: FWSKFMMKSLSVGVSSTGCRRAP*RAKRTV
Trigger: CACCGTGCGCTTCGCCCGCAAAGGCGCCCTCCGGCA...GCCTGTGGAACTGACCCCCACTGATAAACTCTTCATCATGAACTTGGACCAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CAGGACACGGCAGGCGAGGAGGGGGAGTCACCTGCTGCCTTAATCCTCTCAGACGCTAGAGTGACTGTGTaGTTTCAGAGAGTGGTGCCA +
Preference number: 5 (lower is better)
Translates to: QDTAGEEGESPAALILSDARVTV*FQRVVP
Trigger: TGGCACCACTCTCTGAAACAACACAGTCACTCTAGC...GTCTGAGAGGATTAAGGCAGCAGGTGACTCCCCCTCCTCGCCTGCCGTGTCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS CCA 90 bp GGGGGTCCTGGAGCCAAGAGAAACAACAGAAGGAGCCAGCGTCAGTaGAGCATGCCAACGGTTCATCCTACATCGAGAGGCACTGGAGAA +
Preference number: 5 (lower is better)
Translates to: GGPGAKRNNRRSQRQ*SMPTVHPTSRGTGE
Trigger: TTCTCCAGTGCCTCTCGATGTAGGATGAACCGTTGGCATGCTCCACTGACGCTGGCTCCTTCTGTTGTTTCTCTTGGCTCCAGGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGTCGGAGGCTGGACCCTaGTCAGCGCCAGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVSEAGP*SAPGQE
Trigger: CTCCTGCCCTGGCGCTGACAAGGGTCCAGCCTCCGA...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAATCGGAGGCTGGACCCTaGTCAGCGCCAGGGCAGGAG +
Preference number: 5 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQSEAGP*SAPGQE
Trigger: CTCCTGCCCTGGCGCTGACAAGGGTCCAGCCTCCGA...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTCACCGAAGGGTTTCCTaGGGCTTCAGGGAGCTCACA +
Preference number: 5 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVHRRVS*GFRELT
Trigger: TGTGAGCTCCCTGAAGCCCAAGGAAACCCTTCGGTG...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS GCA 90 bp CACCATATAGAGCTGCCCAAACTTTGCCAGGGCAGTGGGCGATGCTaGCTGGCAGAACACATGCCCAAGTTAGTTCTGGAGGATTCCTCC +
Preference number: 5 (lower is better)
Translates to: HHIELPKLCQGSGRC*LAEHMPKLVLEDSS
Trigger: GGAGGAATCCTCCAGAACTAACTTGGGCATGTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTATATGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS GCA 90 bp CAGTCCACCGAGATTTTCTACCACCATATAGAGCTGCCCAAACTTTaGCAGGGCAGTGGGCGATGCTGCCTGGCAGAACACATGCCCAAG +
Preference number: 5 (lower is better)
Translates to: QSTEIFYHHIELPKL*QGSGRCCLAEHMPK
Trigger: CTTGGGCATGTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTATATGGTGGTAGAAAATCTCGGTGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS-3UTR CAA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTCCAAGAAGGTCCTTGTaGCTATGGCCCTGTCCTCTC +
Preference number: 5 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVPRRSL*LWPCPL
Trigger: GAGAGGACAGGGCCATAGCAACAAGGACCTTCTTGG...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS GCA 90 bp TACCACCATATAGAGCTGCCCAAACTTTGCCAGGGCAGTGGGCGATaGTGCCTGGCAGAACACATGCCCAAGTTAGTTCTGGAGGATTCC +
Preference number: 5 (lower is better)
Translates to: YHHIELPKLCQGSGR*CLAEHMPKLVLEDS
Trigger: GGAATCCTCCAGAACTAACTTGGGCATGTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTATATGGTGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS GCA 90 bp CTGGAGCCAAGAGAAACAACAGAAGGAGCCAGCGTCAGTGGAGCATaGCAACGGTTCATCCTACATCGAGAGGCACTGGAGAACTCACCA +
Preference number: 5 (lower is better)
Translates to: LEPRETTEGASVSGA*QRFILHREALENSP
Trigger: TGGTGAGTTCTCCAGTGCCTCTCGATGTAGGATGAACCGTTGGCATGCTCCACTGACGCTGGCTCCTTCTGTTGTTTCTCTTGGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS CCA 90 bp GCTGGACCCTTGTCAGCGCCAGGGCAGGAGAATGTGACAAATTCATaGCACCGCTTGTGCACCACAAAGCAGCAAACTTGGCACTGGAAT +
Preference number: 5 (lower is better)
Translates to: AGPLSAPGQENVTNS*HRLCTTKQQTWHWN
Trigger: ATTCCAGTGCCAAGTTTGCTGCTTTGTGGTGCACAAGCGGTGCCATGAATTTGTCACATTCTCCTGCCCTGGCGCTGACAAGGGTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCGGAGGGCGCCTTaGCGGGCGAAGCGCACGGTG +
Preference number: 5 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVECRRAP*RAKRTV
Trigger: CACCGTGCGCTTCGCCCGCAAAGGCGCCCTCCGGCA...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGACAGCATGGGGCTCCTaGAACCGGCCGACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVTAWGS*NRPTCW
Trigger: CCAGCAAGTCGGCCGGTTCAAGGAGCCCCATGCTGT...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCGTGCCACAGAATGTCTaGGTTGTCACCCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLVPQNV*VVTPSQ
Trigger: CTGGGATGGGGTGACAACCAAGACATTCTGTGGCAC...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS CCA 90 bp GCGTCAGTGGAGCATGCCAACGGTTCATCCTACATCGAGAGGCACTaGAGAACTCACCAAGAACTGAACTTGGTCCCCAGAGGTCATTGT +
Preference number: 5 (lower is better)
Translates to: ASVEHANGSSYIERH*RTHQELNLVPRGHC
Trigger: ACAATGACCTCTGGGGACCAAGTTCAGTTCTTGGTGAGTTCTCCAGTGCCTCTCGATGTAGGATGAACCGTTGGCATGCTCCACTGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS-3UTR CAA 90 bp CGCTCGGCATGTTACTTCCGGTGTTCACAACAAAGCTCGAATGCCTCCTCTTTAGGTGGCACAGGCACATaGAAGTACTCGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RSACYFRCSQQSSNASSLGGTGT*KYSPSS
Trigger: GGAGGAAGGCGAGTACTTCAATGTGCCTGTGCCACC...TAAAGAGGAGGCATTCGAGCTTTGTTGTGAACACCGGAAGTAACATGCCGAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACAGCATGGGGCTCCTaGAACCGGCCGACTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSTAWGS*NRPTCW
Trigger: CCAGCAAGTCGGCCGGTTCAAGGAGCCCCATGCTGT...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTCACAGAATGTCTTGGTaGTCACCCCATCCCAGATGT +
Preference number: 5 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVHRMSW*SPHPRC
Trigger: ACATCTGGGATGGGGTGACAACCAAGACATTCTGTG...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS TCA 90 bp ACGGTTCATCCTACATCGAGAGGCACTGGAGAACTCACCAAGAACTaGACTTGGTCCCCAGAGGTCATTGTACCTGTTGGGACCATCGCT +
Preference number: 5 (lower is better)
Translates to: TVHPTSRGTGELTKN*TWSPEVIVPVGTIA
Trigger: AGCGATGGTCCCAACAGGTACAATGACCTCTGGGGACCAAGTTCAGTTCTTGGTGAGTTCTCCAGTGCCTCTCGATGTAGGATGAACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS TCA 90 bp CTCTGTGATTCTACTTCCTGTGTCTTTTCCATCCCAGGACGCAGCTaGGGCAACAGCCCTTTCTTGGTCTTGTGGCAGAGGTGGGAAGAA +
Preference number: 5 (lower is better)
Translates to: LCDSTSCVFSIPGRS*GNSPFLVLWQRWEE
Trigger: TTCTTCCCACCTCTGCCACAAGACCAAGAAAGGGCTGTTGCCTCAGCTGCGTCCTGGGATGGAAAAGACACAGGAAGTAGAATCACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498058.1
CDS CCA 90 bp GATTTTCTACCACCATATAGAGCTGCCCAAACTTTGCCAGGGCAGTaGGCGATGCTGCCTGGCAGAACACATGCCCAAGTTAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: DFLPPYRAAQTLPGQ*AMLPGRTHAQVSSG
Trigger: TCCAGAACTAACTTGGGCATGTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTATATGGTGGTAGAAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGGGTGGCACAGGCACATaGAAGTACTCGCCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVGGTGT*KYSPSS
Trigger: GGAGGAAGGCGAGTACTTCAATGTGCCTGTGCCACC...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCGCTCCAGTATCCTCGTaGGCTCTGGCCAGGTCATCC +
Preference number: 5 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLAPVSS*ALARSS
Trigger: GGATGACCTGGCCAGAGCCAACGAGGATACTGGAGC...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCGTCCTTGCAAGCCTCTaGTCTTTCCTCATCATCACC +
Preference number: 5 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLVLASL*SFLIIT
Trigger: GGTGATGATGAGGAAAGACAAGAGGCTTGCAAGGAC...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS CCA 90 bp CCTGGAAGAGGACAGCAAACAGCAACATTAGCATCCCGTAGCTTCTaGGGCTCCAAATGGACAGTGGGGGAAGAGCTGGAATTTATGATG +
Preference number: 5 (lower is better)
Translates to: PGRGQQTATLASRSF*GSKWTVGEELEFMM
Trigger: CATCATAAATTCCAGCTCTTCCCCCACTGTCCATTTGGAGCCCCAGAAGCTACGGGATGCTAATGTTGCTGTTTGCTGTCCTCTTCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS-3UTR CAA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCTCATTCCACTCAGGGTaGAGGGAGCATTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLSFHSG*REHLMV
Trigger: AACCATCAAATGCTCCCTCAACCCTGAGTGGAATGA...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTGGAATGAAGGAAGACTaGGGATATGCCTCTATCCTT +
Preference number: 5 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVGMKED*GYASIL
Trigger: AAGGATAGAGGCATATCCCAAGTCTTCCTTCATTCC...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp ACTGACCTCCCATTAATCCCCCAAGAAGGTCCTTGTTGCTATGGCCCTGTCCTCGCCTCCTCTTTAATATaGTCTGTGCATCTCTCTCCC +
Preference number: 5 (lower is better)
Translates to: TDLPLIPQEGPCCYGPVLASSLI*SVHLSP
Trigger: GGGAGAGAGATGCACAGACAATATTAAAGAGGAGGC...GAGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGGATTAATGGGAGGTCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCACCTCTTCAGGGTCCTaGCAAGCCTCTTGTCTTTCC +
Preference number: 5 (lower is better)
Translates to: LQSRKHPALSGQDTQVFITSSGS*QASCLS
Trigger: GGAAAGACAAGAGGCTTGCAAGGACCCTGAAGAGGT...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS TCA 90 bp GCCTGCTCCTCAAATGTAGGGTCCACAAGCAAGAGAAAGAAGTACTaGGGTCCTCTCTGTGAGTCTCCTCTTAGAGCAAACAGTCTCCTG +
Preference number: 5 (lower is better)
Translates to: ACSSNVGSTSKRKKY*GPLCESPLRANSLL
Trigger: CAGGAGACTGTTTGCTCTAAGAGGAGACTCACAGAGAGGACCTCAGTACTTCTTTCTCTTGCTTGTGGACCCTACATTTGAGGAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS CCA 90 bp ATATTCCTGATGACTTCCTGGTCGGGAGGTGTTAGGACTGGTGGATaGCGGGTGAAAAATCGGTCGAAGTTTTCAGCATTTCGCCCACAA +
Preference number: 5 (lower is better)
Translates to: IFLMTSWSGGVRTGG*RVKNRSKFSAFRPQ
Trigger: TTGTGGGCGAAATGCTGAAAACTTCGACCGATTTTTCACCCGCCATCCACCAGTCCTAACACCTCCCGACCAGGAAGTCATCAGGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGACTTGAACCGGCCGACTaGCTGGATGTGATACATGAG +
Preference number: 5 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGLEPAD*LDVIHE
Trigger: CTCATGTATCACATCCAGCAAGTCGGCCGGTTCAAG...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCATTGGTCATCAGCCCTTaGCAGATGGCCACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSLVISP*QMATAS
Trigger: GGAAGCTGTGGCCATCTGCAAAGGGCTGATGACCAA...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCTTGGTCATCAGCCCTTaGCAGATGGCCACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLLVISP*QMATAS
Trigger: GGAAGCTGTGGCCATCTGCAAAGGGCTGATGACCAA...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGTTTGTCTTGTCCTGCTaGCTGTTAGCCTGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVFVLSC*LLACGV
Trigger: CACCCCACAGGCTAACAGCAAGCAGGACAAGACAAA...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGTCCCACCTGCCCTTTTaGTCTTGTCCTGCTTGCTGT +
Preference number: 5 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVSHLPF*SCPACC
Trigger: ACAGCAAGCAGGACAAGACAAAAAGGGCAGGTGGGA...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGACACAAAGCAGCAAACTaGGCACTGGAATCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGHKAAN*ALESLL
Trigger: AAGCAGGGATTCCAGTGCCAAGTTTGCTGCTTTGTG...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGATCTTAAACTTGTGTTaGCTGCGGGGGTCATCGGAG +
Preference number: 5 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVILNLC*LRGSSE
Trigger: CTCCGATGACCCCCGCAGCAAACACAAGTTTAAGAT...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGTTCATCACGCAGCGCTaGTGCACATTCATCATGCAG +
Preference number: 5 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVFITQR*CTFIMQ
Trigger: CTGCATGATGAATGTGCACAAGCGCTGCGTGATGAA...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTTTATCGGGTTGAGGGAGCATTaGATGGTTTTGGTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LQSRKHPALSGQDTQVFIGLREH*MVLVFC
Trigger: ACAGAAGACCAAAACCATCAAATGCTCCCTCAACCC...GATAAAAACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CACCCCAGGCTCAACGATGGAGTTTGCATTCACCTACACATTAATGACAAACTCTCTGAAAGCATGACCTaGCCAAAGCTGCCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: HPRLNDGVCIHLHINDKLSESMT*PKLPFP
Trigger: GGGGAAAGGCAGCTTTGGCAAGGTCATGCTTTCAGA...GAGTTTGTCATTAATGTGTAGGTGAATGCAAACTCCATCGTTGAGCCTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCGGGGGCTGGATCTCTTaGCGTTCAAGTTTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLGGWIS*RSSFSQ
Trigger: TTGGGAGAAACTTGAACGCAAAGAGATCCAGCCCCC...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATATACATACGCTTGGCTaGAAGTCTTACACCCCAGGC +
Preference number: 5 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHIHTLG*KSYTPG
Trigger: GCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTAT...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CCATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCCCCCAAGAAGGTCCTaGTTGCTATGGCCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: PCENSSTHPRRVINSTDLPPRRS*LLWPCP
Trigger: AGGACAGGGCCATAGCAACAAGGACCTTCTTGGGGG...GAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATTTGCTTTTATGGACTTaGTCCTGTGGGCAGATCCCC +
Preference number: 5 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHLLLWT*SCGQIP
Trigger: GGGGATCTGCCCACAGGACAAAGTCCATAAAAGCAA...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CATGTGAAAACAGTAGCACTCATCCAAGGAGGGTTATTAATTCTACTGACCTCCAGCAGGCAGGGTGGCTaGCCCAAGATTTCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: HVKTVALIQGGLLILLTSSRQGG*PKISVG
Trigger: ACCCACTGAAATCTTGGGCAAGCCACCCTGCCTGCT...GGAGGTCAGTAGAATTAATAACCCTCCTTGGATGAGTGCTACTGTTTTCACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS TCA 90 bp GGAGCATTTGGAAAACATGAGGCACAGGCAAGAATACCTTGTGTGTaGATACCCGGCAGTCAGAGAGAATGGGCTACTTACAGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: GAFGKHEAQARIPCV*IPGSQREWATYSFW
Trigger: CCAAAAGCTGTAAGTAGCCCATTCTCTCTGACTGCCGGGTATTCACACACAAGGTATTCTTGCCTGTGCCTCATGTTTTCCAAATGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS TCA 90 bp TCTGTGAGTCTCCTCTTAGAGCAAACAGTCTCCTGTTTGAGGCTCTaGACCATCATTGGTGACACAGTCCACCGAGATTTTCTACCACCA +
Preference number: 5 (lower is better)
Translates to: SVSLLLEQTVSCLRL*TIIGDTVHRDFLPP
Trigger: TGGTGGTAGAAAATCTCGGTGGACTGTGTCACCAATGATGGTTCAGAGCCTCAAACAGGAGACTGTTTGCTCTAAGAGGAGACTCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS GCA 90 bp GGAAAGAGCTGGAATGGGCTGCCATATTGCTGGCAGAAACCTTCATaGCATGGCCAATTTATTGGCTCCAAGTCCAGTAAGTTTTCTTGG +
Preference number: 5 (lower is better)
Translates to: GKSWNGLPYCWQKPS*HGQFIGSKSSKFSW
Trigger: CCAAGAAAACTTACTGGACTTGGAGCCAATAAATTGGCCATGGCATGAAGGTTTCTGCCAGCAATATGGCAGCCCATTCCAGCTCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS GCA 90 bp CAGCTGGGAAAAGAAAATGGAAAGAGCTGGAATGGGCTGCCATATTaGTGGCAGAAACCTTCATGCCATGGCCAATTTATTGGCTCCAAG +
Preference number: 5 (lower is better)
Translates to: QLGKENGKSWNGLPY*WQKPSCHGQFIGSK
Trigger: CTTGGAGCCAATAAATTGGCCATGGCATGAAGGTTTCTGCCAGCAATATGGCAGCCCATTCCAGCTCTTTCCATTTTCTTTTCCCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS GCA 90 bp TGGCAGCACAGCTGGGAAAAGAAAATGGAAAGAGCTGGAATGGGCTaGCATATTGCTGGCAGAAACCTTCATGCCATGGCCAATTTATTG +
Preference number: 5 (lower is better)
Translates to: WQHSWEKKMERAGMG*HIAGRNLHAMANLL
Trigger: CAATAAATTGGCCATGGCATGAAGGTTTCTGCCAGCAATATGGCAGCCCATTCCAGCTCTTTCCATTTTCTTTTCCCAGCTGTGCTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS CCA 90 bp AATCGGTCAGTTTCATCCGGTCTCTGTTGCCATTGTTGTCAAATTTaGAGACAGTGTTGGTCGTCTTTTCTTCCGGGACCTTGGTTCCCT +
Preference number: 5 (lower is better)
Translates to: NRSVSSGLCCHCCQI*RQCWSSFLPGPWFP
Trigger: AGGGAACCAAGGTCCCGGAAGAAAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACTGACCGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS CCA 90 bp GAAAATCCTTCGAATTCTGATTGGTCAATATTCCTGATGACTTCCTaGTCGGGAGGTGTTAGGACTGGTGGATGGCGGGTGAAAAATCGG +
Preference number: 5 (lower is better)
Translates to: ENPSNSDWSIFLMTS*SGGVRTGGWRVKNR
Trigger: CCGATTTTTCACCCGCCATCCACCAGTCCTAACACCTCCCGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGAAGGATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACAAAGCGGGCGGTGAATTaGTGGTTCTTGACCTCATGC +
Preference number: 5 (lower is better)
Translates to: HVECQHVHRESWKTRIDTKRAVN*WFLTSC
Trigger: GCATGAGGTCAAGAACCACAAATTCACCGCCCGCTT...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCCACAAAGCAGCAAACTaGGCACTGGAATCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLHKAAN*ALESLL
Trigger: AAGCAGGGATTCCAGTGCCAAGTTTGCTGCTTTGTG...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAGGGTTGAGGGAGCATTaGATGGTTTTGGTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGGLREH*MVLVFC
Trigger: ACAGAAGACCAAAACCATCAAATGCTCCCTCAACCC...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCACAGAATGTCTTGGTaGTCACCCCATCCCAGATGT +
Preference number: 5 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAHRMSW*SPHPRC
Trigger: ACATCTGGGATGGGGTGACAACCAAGACATTCTGTG...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGTGTCTGGTGAACTCTTaGTCGAAGTTGGAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: KSPLRQAFHMLNASMCTVCLVNS*SKLEVS
Trigger: AGACACCTCCAACTTCGACAAAGAGTTCACCAGACA...CACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AACTCTGCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACACCCCTCAGGGAGCATTaGGAAAACATGAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: NSAHPRTILRKLSAKTVTPLREH*ENMRHR
Trigger: CCTGTGCCTCATGTTTTCCAAATGCTCCCTGAGGGG...TGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CAA 90 bp GCCTTGCTACAGAGCAGAAAGCACCCTGCACTTTCTGGACAGGACACCCAGGTTTCTTACTGCCTAAACTaGTCAGATAGAACTTCAAGT +
Preference number: 5 (lower is better)
Translates to: ALLQSRKHPALSGQDTQVSYCLN*SDRTSS
Trigger: ACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGA...AACCTGGGTGTCCTGTCCAGAAAGTGCAGGGTGCTTTCTGCTCTGTAGCAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGTTTACTAGCAATTGCTaGGGGCAAGTCTCACCAGGG +
Preference number: 5 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMFTSNC*GQVSPG
Trigger: CCCTGGTGAGACTTGCCCCAAGCAATTGCTAGTAAA...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAGTTTTGGTCTTCTGTTaGCTCTCACTTTTGGGATCG +
Preference number: 5 (lower is better)
Translates to: LRQAFHMLNASMCTVNPGVLVFC*LSLLGS
Trigger: CGATCCCAAAAGTGAGAGCAAACAGAAGACCAAAAC...TCCAGGATTCACGGTGCACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATGTTTTGGTCTTCTGTTaGCTCTCACTTTTGGGATCG +
Preference number: 5 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHVLVFC*LSLLGS
Trigger: CGATCCCAAAAGTGAGAGCAAACAGAAGACCAAAAC...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCATCATTCCACTCAGGGTaGAGGGAGCATTTGATGGTT +
Preference number: 5 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSSFHSG*REHLMV
Trigger: AACCATCAAATGCTCCCTCAACCCTGAGTGGAATGA...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATTCTGAAAGCATGACCTaGCCAAAGCTGCCTTTCCCC +
Preference number: 5 (lower is better)
Translates to: MLNASMCTVNPGRLELIHSESMT*PKLPFP
Trigger: GGGGAAAGGCAGCTTTGGCAAGGTCATGCTTTCAGA...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATCTTGAACCGGCCGACTaGCTGGATGTGATACATGAG +
Preference number: 5 (lower is better)
Translates to: MLNASMCTVNPGRLELIHLEPAD*LDVIHE
Trigger: CTCATGTATCACATCCAGCAAGTCGGCCGGTTCAAG...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGGTGCCACAGAATGTCTaGGTTGTCACCCCATCCCAG +
Preference number: 5 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQVPQNV*VVTPSQ
Trigger: CTGGGATGGGGTGACAACCAAGACATTCTGTGGCAC...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TCACAGTCTCTCGGACTGGAGGGACAACCCCATGGCTGTTTTATTACAAGACAAAAAGCAACCATACACTaGGATACAAGCCAAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SQSLGLEGQPHGCFITRQKATIH*DTSQAP
Trigger: TGGAGCTTGGCTTGTATCCAAGTGTATGGTTGCTTT...TTGTCTTGTAATAAAACAGCCATGGGGTTGTCCCTCCAGTCCGAGAGACTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CGGAAGTGGAAGAGTACCGCTAACATCCAATTATCCACAGATTGGATGGTTGGGGAACTGCAGGAGACTTaGCCTAAGCAGAAATCCAAA +
Preference number: 5 (lower is better)
Translates to: RKWKSTANIQLSTDWMVGELQET*PKQKSK
Trigger: TTTGGATTTCTGCTTAGGCAAAGTCTCCTGCAGTTC...CCCAACCATCCAATCTGTGGATAATTGGATGTTAGCGGTACTCTTCCACTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTCCAGGGAAGAAGGCCTaGTATTCCCTAGTGCCCTGC +
Preference number: 5 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLPGKKA*YSLVPC
Trigger: GCAGGGCACTAGGGAATACAAGGCCTTCTTCCCTGG...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATACCCACAGTCTAGAATaGGGTGTTTATCAGGCAGAA +
Preference number: 5 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHTHSLE*GVYQAE
Trigger: TTCTGCCTGATAAACACCCAATTCTAGACTGTGGGT...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS TCA 90 bp GTTCAAGTTTCTCCCAATCAATATACCGGAAAAATGCATGCTCTTTaGTATCACGTTCGCCTTCAGGTCCACAACCCAGACGTTTGCCTG +
Preference number: 5 (lower is better)
Translates to: VQVSPNQYTGKMHAL*YHVRLQVHNPDVCL
Trigger: CAGGCAAACGTCTGGGTTGTGGACCTGAAGGCGAACGTGATATCAAAGAGCATGCATTTTTCCGGTATATTGATTGGGAGAAACTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000466124.1
ENST00000643927.1
CDS CCA 90 bp GGGGGTAGGCAGAAGTTCAGCAATTGTATAGTGGAGAAGGGGACATaGGATATGATGAACTGGATGAAGGATTATAGTTTCACTAGCTGG +
Preference number: 5 (lower is better)
Translates to: GGRQKFSNCIVEKGT*DMMNWMKDYSFTSW
Trigger: CCAGCTAGTGAAACTATAATCCTTCATCCAGTTCATCATATCCCATGTCCCCTTCTCCACTATACAATTGCTGAACTTCTGCCTACCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487674.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGATCTTAAACTTGTGTTaGCTGCGGGGGTCATCGGAG +
Preference number: 5 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVILNLC*LRGSSE
Trigger: CTCCGATGACCCCCGCAGCAAACACAAGTTTAAGAT...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCCATTGTTGTCAAATTaGGAGACAGTGTTGGTCGTC +
Preference number: 5 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAPLLSN*ETVLVV
Trigger: GACGACCAACACTGTCTCCAAATTTGACAACAATGG...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATCCATTGTTGTCAAATTaGGAGACAGTGTTGGTCGTC +
Preference number: 5 (lower is better)
Translates to: GQPHGCFITRQPGKKALYPLLSN*ETVLVV
Trigger: GACGACCAACACTGTCTCCAAATTTGACAACAATGG...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AGAAAGACACAGGACCAAGATACGCCAGTCATTGGGTGGCTGATACCATCTCATTTCATCCGGTCTCTGTaGCCATTGTTGTCAAATTTG +
Preference number: 5 (lower is better)
Translates to: RKTQDQDTPVIGWLIPSHFIRSL*PLLSNL
Trigger: CAAATTTGACAACAATGGCAACAGAGACCGGATGAA...ATGAGATGGTATCAGCCACCCAATGACTGGCGTATCTTGGTCCTGTGTCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCCTGGAAGACTAGAATaGATACATACGCTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAPGRLE*IHTLGL
Trigger: CAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGG...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TCACAGTCCAAAAATGGATCTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAACAGGCAAGAATACCTaGTGTGTGAATACCCGGCAG +
Preference number: 5 (lower is better)
Translates to: SQSKNGSELCSPKNHSQKTGKNT*CVNTRQ
Trigger: CTGCCGGGTATTCACACACAAGGTATTCTTGCCTGT...TTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGGACTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCTTCGCCCACAAGCTTTaGGCTTATAAGGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECFAHKL*AYKGAG
Trigger: TCCAGCCCCCTTATAAGCCAAAAGCTTGTGGGCGAA...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GGACAACCCCATGGCTGTTTTATTACAAGACAACCAGGGAAGAAGGCCTTGTATGTTAAGGATCTCTCATaGCTGGGTTCACTCTCCTTT +
Preference number: 5 (lower is better)
Translates to: GQPHGCFITRQPGKKALYVKDLS*LGSLSF
Trigger: AAAGGAGAGTGAACCCAGCAATGAGAGATCCTTAAC...ATACAAGGCCTTCTTCCCTGGTTGTCTTGTAATAAAACAGCCATGGGGTTGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACATTGTATGTTGGCTaGGGGATAGAAATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GRLELIHTLGLKSYTPGSTLYVG*GIEMWW
Trigger: CCACCACATTTCTATCCCCAAGCCAACATACAATGT...TGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS TCA 90 bp CACTGGCTTTCTGAAGTTCAGAAATCCCAAAGGACAAAGATCCCATaGAGTCATTCCTGCTGGTCAAATCCCAATCCCAAATCTCTACTG +
Preference number: 5 (lower is better)
Translates to: HWLSEVQKSQRTKIP*SHSCWSNPNPKSLL
Trigger: CAGTAGAGATTTGGGATTGGGATTTGACCAGCAGGAATGACTTCATGGGATCTTTGTCCTTTGGGATTTCTGAACTTCAGAAAGCCAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321728.12
ENST00000482000.2
ENST00000498739.1
ENST00000643927.1
CDS GCA 90 bp TCTTTGCGTTCAAGTTTCTCCCAATCAATATACCGGAAAAATGCATaGTCTTTGATATCACGTTCGCCTTCAGGTCCACAACCCAGACGT +
Preference number: 5 (lower is better)
Translates to: SLRSSFSQSIYRKNA*SLISRSPSGPQPRR
Trigger: ACGTCTGGGTTGTGGACCTGAAGGCGAACGTGATATCAAAGAGCATGCATTTTTCCGGTATATTGATTGGGAGAAACTTGAACGCAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000466124.1
ENST00000643927.1
CDS-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCGTGTGGATCTTAAACTaGTGTTTGCTGCGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECVWILN*CLLRGS
Trigger: TGACCCCCGCAGCAAACACAAGTTTAAGATCCACAC...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATGTTTGCTCTCACTTTaGGGATCGGGAATCAGTTTC +
Preference number: 5 (lower is better)
Translates to: HVECQHVHRESWKTRIDTCLLSL*GSGISF
Trigger: GAAACTGATTCCCGATCCCAAAAGTGAGAGCAAACA...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TGGAAGACTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCTTCATCCGGTCTCTGTaGCCATTGTTGTCAAATTTG +
Preference number: 5 (lower is better)
Translates to: WKTRIDTYAWLEVLHPRLFIRSL*PLLSNL
Trigger: CAAATTTGACAACAATGGCAACAGAGACCGGATGAA...GAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAGTCTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGGAATCGAGCATCACGTaGTCAAGTTTTAGGTCACGG +
Preference number: 5 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVESSIT*SSFRSR
Trigger: CCGTGACCTAAAACTTGACAACGTGATGCTCGATTC...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GCTCACCCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGGGGGCTGGATCTCTTaGCGTTCAAGTTTCTCCCAA +
Preference number: 5 (lower is better)
Translates to: AHPRTILRKLSAKTVTIIGGWIS*RSSFSQ
Trigger: TTGGGAGAAACTTGAACGCAAAGAGATCCAGCCCCC...AATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGGGTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CAA 90 bp TTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGTTGGAGGTGTCTCTCTaGTCTCTAGCTTTTGGCTTA +
Preference number: 5 (lower is better)
Translates to: LNASMCTVNPGRLELIHTLEVSL*SLAFGL
Trigger: TAAGCCAAAAGCTAGAGACAAGAGAGACACCTCCAA...CGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000321728.12
CDS-3UTR CAA 90 bp CATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACACCTGGAAGACTAGAATaGATACATACGCTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: HVECQHVHRESWKTRIDTPGRLE*IHTLGL
Trigger: CAAGCCAAGCGTATGTATCAATTCTAGTCTTCCAGG...TGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTTCCGCAGCCGTCTTCTaGGTTAAATCAAAGCAGGTC +
Preference number: 5 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVSAAVF*VKSKQV
Trigger: GACCTGCTTTGATTTAACCAAGAAGACGGCTGCGGA...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTGGAGGAGTGGTGATTTaGATAAGAAAATCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLGGVVI*IRKSRA
Trigger: GGCTCTTGATTTTCTTATCAAAATCACCACTCCTCC...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAAGTTCCCTCCTTACTCTaGCCAAGTCTATGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEVPSLL*PSLCEG
Trigger: ACCCTCACATAGACTTGGCAAGAGTAAGGAGGGAAC...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAGAATTGATACATACGCTTGGCTTGAAGTCTTACACCCCAGGCTCAACGATGGGCTTTCATTTCACATaGTATGTTGGCTTGGGGATA +
Preference number: 5 (lower is better)
Translates to: LELIHTLGLKSYTPGSTMGFHFT*YVGLGI
Trigger: TATCCCCAAGCCAACATACAATGTGAAATGAAAGCC...CATCGTTGAGCCTGGGGTGTAAGACTTCAAGCCAAGCGTATGTATCAATTCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS TCA 90 bp GAGATGAAGAGATGGAAAGTACAGCAGTGTTCACTTACCGGTAAATaGTGCCCTTACTCTGTAAGAAGAACAGACCGATGGCAATTTCTG +
Preference number: 5 (lower is better)
Translates to: EMKRWKVQQCSLTGK*CPYSVRRTDRWQFL
Trigger: CAGAAATTGCCATCGGTCTGTTCTTCTTACAGAGTAAGGGCATCATTTACCGGTAAGTGAACACTGCTGTACTTTCCATCTCTTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS GCA 90 bp AATAGCTTCTCAAAGCCTCTGTTTAAATGTAGAGTAGATTGTGTCTaGTCACGTTCCATTGGCCAATGCTCCACATCAGTGGGAAGGAAA +
Preference number: 5 (lower is better)
Translates to: NSFSKPLFKCRVDCV*SRSIGQCSTSVGRK
Trigger: TTTCCTTCCCACTGATGTGGAGCATTGGCCAATGGAACGTGAGCAGACACAATCTACTCTACATTTAAACAGAGGCTTTGAGAAGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498058.1
CDS-3UTR CAA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTGTGTGGATCTTAAACTaGTGTTTGCTGCGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLVWILN*CLLRGS
Trigger: TGACCCCCGCAGCAAACACAAGTTTAAGATCCACAC...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTTTCATCACGCAGCGCTaGTGCACATTCATCATGCAG +
Preference number: 5 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLFITQR*CTFIMQ
Trigger: CTGCATGATGAATGTGCACAAGCGCTGCGTGATGAA...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATTGTTTGCTCTCACTTTaGGGATCGGGAATCAGTTTC +
Preference number: 5 (lower is better)
Translates to: MLNASMCTVNPGRLELIHCLLSL*GSGISF
Trigger: GAAACTGATTCCCGATCCCAAAAGTGAGAGCAAACA...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGAATTTGGAGACAGTGTaGGTCGTCTTTTCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQNLETV*VVFSSG
Trigger: CCCGGAAGAAAAGACGACCAACACTGTCTCCAAATT...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCGAATCGAGCATCACGTaGTCAAGTTTTAGGTCACGG +
Preference number: 5 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECESSIT*SSFRSR
Trigger: CCGTGACCTAAAACTTGACAACGTGATGCTCGATTC...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGAATCGAAGTTGGTCATCAGCCCTTaGCAGATGGCCACAGCTTCC +
Preference number: 5 (lower is better)
Translates to: RTILRKLSAKTVTIIESKLVISP*QMATAS
Trigger: GGAAGCTGTGGCCATCTGCAAAGGGCTGATGACCAA...CTTCGATTCAATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CAA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTAAAAATGCATGCTCTTaGATATCACGTTCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAKNACS*ISRSPS
Trigger: TGAAGGCGAACGTGATATCAAAGAGCATGCATTTTT...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp ATGTTGAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATAACTCTTTGTCGAAGTaGGAGGTGTCTCTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: MLNASMCTVNPGRLELIHNSLSK*EVSLLS
Trigger: AGACAAGAGAGACACCTCCAACTTCGACAAAGAGTT...ATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGTCTGGTGAACTCTTaGTCGAAGTTGGAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVECLVNS*SKLEVS
Trigger: AGACACCTCCAACTTCGACAAAGAGTTCACCAGACA...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CCAATCCCCACAAGTCACACTTTAGCATCCTTTAATTATCTTGATTGCACTTATCCACAGATTGGATGGTaGGGGGTGAATATGGCAGTG +
Preference number: 5 (lower is better)
Translates to: PIPTSHTLASFNYLDCTYPQIGW*GVNMAV
Trigger: CACTGCCATATTCACCCCCAACCATCCAATCTGTGG...ATAAGTGCAATCAAGATAATTAAAGGATGCTAAAGTGTGACTTGTGGGGATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAACCCTTTTCAAGTAGTTaGGGGATGAGGGTGAGCAAA +
Preference number: 5 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVEPFSSS*GMRVSK
Trigger: TTTGCTCACCCTCATCCCCAAACTACTTGAAAAGGG...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp TACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGCATGTGTCTCTAAACTTGACTTaGGGCTCCAGTATCCTCGTT +
Preference number: 5 (lower is better)
Translates to: YKEKPSKTSFPHVECQHVSLNLT*GSSILV
Trigger: AACGAGGATACTGGAGCCCAAAGTCAAGTTTAGAGA...CACATGCTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp ATGGAATTGATTCCCATTGATCCTAAAGGTCTCCCAAATGGGCCACTGTCCCTTAAAAGGCAGGTATATTaGGAGCTAGAAGACACAAAG +
Preference number: 5 (lower is better)
Translates to: MELIPIDPKGLPNGPLSLKRQVY*ELEDTK
Trigger: CTTTGTGTCTTCTAGCTCCAAATATACCTGCCTTTT...AAGGGACAGTGGCCCATTTGGGAGACCTTTAGGATCAATGGGAATCAATTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATTGGAGGTGTCTCTCTaGTCTCTCTGCCAAATGGAA +
Preference number: 5 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVELEVSL*SLCQME
Trigger: TTCCATTTGGCAGAGAGACAAGAGAGACACCTCCAA...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCGGTCTCTGTTGCCATaGTTGTCAAATTTGGAGACA +
Preference number: 5 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECRSLLP*LSNLET
Trigger: TGTCTCCAAATTTGACAACAATGGCAACAGAGACCG...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTAACTCTTTGTCGAAGTaGGAGGTGTCTCTCTTGTCT +
Preference number: 5 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVNSLSK*EVSLLS
Trigger: AGACAAGAGAGACACCTCCAACTTCGACAAAGAGTT...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGAATCGAAGGTTCCAGTAGACACATaGACGTCTACCCCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: RTILRKLSAKTVTIIESKVPVDT*TSTPQG
Trigger: TCCCTGAGGGGTAGACGTCAATGTGTCTACTGGAAC...CTTCGATTCAATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CAA 90 bp GAATGCCAGCATGTGCACCGTGAATCCTGGAAGACTAGAATTGATACATACGCTCAAAGCAGGTCGTCATaGTGGTTAATAACATTTGAA +
Preference number: 5 (lower is better)
Translates to: ECQHVHRESWKTRIDTYAQSRSS*WLITFE
Trigger: TTCAAATGTTATTAACCACAATGACGACCTGCTTTG...AGCGTATGTATCAATTCTAGTCTTCCAGGATTCACGGTGCACATGCTGGCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATTGGTCCAGACAGGACTaGCTTTTATGGACTTTGTCC +
Preference number: 5 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHWSRQD*LLWTLS
Trigger: GGACAAAGTCCATAAAAGCAAGTCCTGTCTGGACCA...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATGGGCTGCAGCCAAAGTaGCCTCAGATTATAAAGGCC +
Preference number: 5 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNGLQPK*PQIIKA
Trigger: GGCCTTTATAATCTGAGGCAACTTTGGCTGCAGCCC...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATCTCTGTTGCCATTGTaGTCAAATTTGGAGACAGTG +
Preference number: 5 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVESLLPL*SNLETV
Trigger: CACTGTCTCCAAATTTGACAACAATGGCAACAGAGA...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTTCTCTGTTGCCATTGTaGTCAAATTTGGAGACAGTG +
Preference number: 5 (lower is better)
Translates to: LASYTYKEKPSKTSFPHVSLLPL*SNLETV
Trigger: CACTGTCTCCAAATTTGACAACAATGGCAACAGAGA...AACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCGTGTTCCATGATGGATaGGAAGAGTTCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECVFHDG*EEFIFI
Trigger: GATGAAGATGAACTCTTCCAATCCATCATGGAACAC...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp TACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCCAGGTGTTCCATGATGGATaGGAAGAGTTCATCTTCATC +
Preference number: 5 (lower is better)
Translates to: YTYKEKPSKTSFPHVECQVFHDG*EEFIFI
Trigger: GATGAAGATGAACTCTTCCAATCCATCATGGAACAC...CTGGCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CCAAAAATGGATCTGAACTCTGCTCACCCAAGAACCATTCTCAGAAAGTTGTCAAAAAATGCATGCTCTTaGATATCACGTTCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: PKMDLNSAHPRTILRKLSKNACS*ISRSPS
Trigger: TGAAGGCGAACGTGATATCAAAGAGCATGCATTTTT...TGACAACTTTCTGAGAATGGTTCTTGGGTGAGCAGAGTTCAGATCCATTTTTGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CAA 90 bp AGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGAATCGAAGGGCTACTTACAGCTTTaGGCTTATAAGGGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: RTILRKLSAKTVTIIESKGYLQL*AYKGAG
Trigger: TCCAGCCCCCTTATAAGCCAAAAGCTGTAAGTAGCC...CTTCGATTCAATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCTGGGTTCACTCTCCTTaGCAAAAGACCTTTTACAAG +
Preference number: 5 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECWVHSP*QKTFYK
Trigger: CTTGTAAAAGGTCTTTTGCAAAGGAGAGTGAACCCA...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS TCA 90 bp CAAGGACACCATATGCTTGGCAATGCTCAGAATTCAATACAATATTaGACTAGGTGTAGGACATTAAAGAACCCATGGATGGTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: QGHHMLGNAQNSIQY*TRCRTLKNPWMVSY
Trigger: ATAGCTGACCATCCATGGGTTCTTTAATGTCCTACACCTAGTTCAATATTGTATTGAATTCTGAGCATTGCCAAGCATATGGTGTCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487674.1
CDS CCA 90 bp ATAGGCATCGTCGTTTCCATCTTTATAGAGACTAAGCTGGGCCAATaGAAAATGTCCATCTTAGTAACCAGTGATTTTGTGCATATGTGT +
Preference number: 5 (lower is better)
Translates to: IGIVVSIFIETKLGQ*KMSILVTSDFVHMC
Trigger: ACACATATGCACAAAATCACTGGTTACTAAGATGGACATTTTCCATTGGCCCAGCTTAGTCTCTATAAAGATGGAAACGACGATGCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS-3UTR CAA 90 bp AGGAATACAACCATCTTTGTTTCAAGAAACGGTGTCTTTTTCAGAGCACTTAATAATTTGGAGACAGTGTaGGTCGTCTTTTCTTCCGGG +
Preference number: 5 (lower is better)
Translates to: RNTTIFVSRNGVFFRALNNLETV*VVFSSG
Trigger: CCCGGAAGAAAAGACGACCAACACTGTCTCCAAATT...ATTAAGTGCTCTGAAAAAGACACCGTTTCTTGAAACAAAGATGGTTGTATTCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATAAAAATGCATGCTCTTaGATATCACGTTCGCCTTCA +
Preference number: 5 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHKNACS*ISRSPS
Trigger: TGAAGGCGAACGTGATATCAAAGAGCATGCATTTTT...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp GCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATCAGACACAGTAGTTTaGACATTGTCTGTTCATTTG +
Preference number: 5 (lower is better)
Translates to: ASYTYKEKPSKTSFPHVESDTVV*TLSVHL
Trigger: CAAATGAACAGACAATGTCAAAACTACTGTGTCTGA...TTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCGTTGAGATCATTTCTTaGAGGTTGATAGCATCTGAA +
Preference number: 5 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECVEIIS*RLIASE
Trigger: TTCAGATGCTATCAACCTCAAAGAAATGATCTCAAC...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATGTTGAATGCGGCAAAACAATGGAATaGATTCCCATTGATCCTAAA +
Preference number: 5 (lower is better)
Translates to: SYTYKEKPSKTSFPHVECGKTME*IPIDPK
Trigger: TTTAGGATCAATGGGAATCAATTCCATTGTTTTGCC...GCATTCAACATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp TCCTTCTCTTACTGCCTAAACTTGTCAGATAGAACTTCAAGTTTGCTTCACCTTATGCCTCTATCCTTTTaGCAACTTATAATTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SFSYCLNLSDRTSSLLHLMPLSF*QLIIVP
Trigger: GGGGACAATTATAAGTTGCAAAAAGGATAGAGGCAT...AAGGTGAAGCAAACTTGAAGTTCTATCTGACAAGTTTAGGCAGTAAGAGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS CCA 90 bp TTTAAAAATTCAGAGTTAACAAAGGAAAATCCTTCGAATTCTGATTaGTCAATATTCCTGATGACTTCCTGGTCGGGAGGTGTTAGGACT +
Preference number: 5 (lower is better)
Translates to: FKNSELTKENPSNSD*SIFLMTSWSGGVRT
Trigger: AGTCCTAACACCTCCCGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGAAGGATTTTCCTTTGTTAACTCTGAATTTTTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS-3UTR CAA 90 bp AAACTAGCAAGCTACACATACAAAGAAAAGCCCTCTAAGACAAGCTTTCCACATTCAGACACAGTAGTTTaGACATTGTCTGTTCATTTG +
Preference number: 5 (lower is better)
Translates to: KLASYTYKEKPSKTSFPHSDTVV*TLSVHL
Trigger: CAAATGAACAGACAATGTCAAAACTACTGTGTCTGA...ATGTGGAAAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTGTAGCTTGCTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS-3UTR CAA 90 bp CCAAGAACCATTCTCAGAAAGTTGTCAGCTAAGACAGTTACAATAATTGAATCGACCATTCTCAGAAAGTaGTCAGCTAAGACAGTTACA +
Preference number: 5 (lower is better)
Translates to: PRTILRKLSAKTVTIIESTILRK*SAKTVT
Trigger: TGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGT...CGATTCAATTATTGTAACTGTCTTAGCTGACAACTTTCTGAGAATGGTTCTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS GCA 72 bp AGTCACCCGCCTTCCTCCCTGCCTCTGTACCCCAGGTaGAAACTCCCAGCCACAGGCGGGTGCCCAAGAGTC +
Preference number: 6 (lower is better)
Translates to: SHPPSSLPLYPR*KLPATGGCPRV
Trigger: GACTCTTGGGCACCCGCCTGTGGCTGGGAGTTTGCACCTGGGGTACAGAGGCAGGGAGGAAGGCGGGTGACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498739.1
CDS GCA 72 bp GAGCTGCCCAAACTTTGCCAGGGCAGTGGGCGATGCTaGCTGGCAGAACACATGCCCAAGTTAGTTCTGGAG +
Preference number: 6 (lower is better)
Translates to: ELPKLCQGSGRC*LAEHMPKLVLE
Trigger: CTCCAGAACTAACTTGGGCATGTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS CCA 72 bp CCACCATATAGAGCTGCCCAAACTTTGCCAGGGCAGTaGGCGATGCTGCCTGGCAGAACACATGCCCAAGTT +
Preference number: 6 (lower is better)
Translates to: PPYRAAQTLPGQ*AMLPGRTHAQV
Trigger: AACTTGGGCATGTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTATATGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS CAA 72 bp GTGGGGCTGGAGTACGTGTGGATCTTAAACTTGTGTTaGCTGCGGGGGTCATCGGAGGCTGGACCCTTGTCA +
Preference number: 6 (lower is better)
Translates to: VGLEYVWILNLC*LRGSSEAGPLS
Trigger: TGACAAGGGTCCAGCCTCCGATGACCCCCGCAGCAAACACAAGTTTAAGATCCACACGTACTCCAGCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000643927.1
ENST00000647422.1
CDS TCA 72 bp CCTGGTCGGGAGGTGTTAGGACTGGTGGATGGCGGGTaGAAAATCGGTCGAAGTTTTCAGCATTTCGCCCAC +
Preference number: 6 (lower is better)
Translates to: PGREVLGLVDGG*KIGRSFQHFAH
Trigger: GTGGGCGAAATGCTGAAAACTTCGACCGATTTTTCACCCGCCATCCACCAGTCCTAACACCTCCCGACCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS GCA 72 bp ATAGAGCTGCCCAAACTTTGCCAGGGCAGTGGGCGATaGTGCCTGGCAGAACACATGCCCAAGTTAGTTCTG +
Preference number: 6 (lower is better)
Translates to: IELPKLCQGSGR*CLAEHMPKLVL
Trigger: CAGAACTAACTTGGGCATGTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS GCA 72 bp TGCAGATTTCCATCCAATCCTTGGCACTGGAATCCCTaGTTCCCGAAGCCCCAGATGAAGTCGGTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: CRFPSNPWHWNP*FPKPQMKSVQW
Trigger: CCACTGCACCGACTTCATCTGGGGCTTCGGGAAGCAGGGATTCCAGTGCCAAGGATTGGATGGAAATCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS CCA 72 bp CTGCCGCAGTTCTTCATTGGCCTCACTTCCTTCTGGTaGCACAGGCACATTGAAGTACTCGCCTTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: LPQFFIGLTSFW*HRHIEVLAFLL
Trigger: CAGGAGGAAGGCGAGTACTTCAATGTGCCTGTGCCACCAGAAGGAAGTGAGGCCAATGAAGAACTGCGGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000498739.1
ENST00000643927.1
CDS CAA 72 bp AACTCACCAAGAACTGAACTTGGTCCCCAGAGGTCATaGTACCTGTTGGGACCATCGCTGGAGCCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: NSPRTELGPQRS*YLLGPSLEPCA
Trigger: GGCACAGGGCTCCAGCGATGGTCCCAACAGGTACAATGACCTCTGGGGACCAAGTTCAGTTCTTGGTGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS CAA 90 bp ACAGTCCACCGAGATTTTCTACCACCATATAGAGCTGCCCAAACTTaGCCAGGGCAGTGGGCGATGCTGCCTGGCAGAACACATGCCCAA +
Preference number: 6 (lower is better)
Translates to: TVHRDFLPPYRAAQT*PGQWAMLPGRTHAQ
Trigger: TTGGGCATGTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTATATGGTGGTAGAAAATCTCGGTGGACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS GCA 72 bp GAGATTTTCTACCACCATATAGAGCTGCCCAAACTTTaGCAGGGCAGTGGGCGATGCTGCCTGGCAGAACAC +
Preference number: 6 (lower is better)
Translates to: EIFYHHIELPKL*QGSGRCCLAEH
Trigger: GTGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTATATGGTGGTAGAAAATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS GCA 72 bp AGAGAAACAACAGAAGGAGCCAGCGTCAGTGGAGCATaGCAACGGTTCATCCTACATCGAGAGGCACTGGAG +
Preference number: 6 (lower is better)
Translates to: RETTEGASVSGA*QRFILHREALE
Trigger: CTCCAGTGCCTCTCGATGTAGGATGAACCGTTGGCATGCTCCACTGACGCTGGCTCCTTCTGTTGTTTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS CAA 72 bp CGAGATTTTCTACCACCATATAGAGCTGCCCAAACTTaGCCAGGGCAGTGGGCGATGCTGCCTGGCAGAACA +
Preference number: 6 (lower is better)
Translates to: RDFLPPYRAAQT*PGQWAMLPGRT
Trigger: TGTTCTGCCAGGCAGCATCGCCCACTGCCCTGGCAAAGTTTGGGCAGCTCTATATGGTGGTAGAAAATCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS CAA 90 bp TCATCCTACATCGAGAGGCACTGGAGAACTCACCAAGAACTGAACTaGGTCCCCAGAGGTCATTGTACCTGTTGGGACCATCGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: SSYIERHWRTHQELN*VPRGHCTCWDHRWS
Trigger: GCTCCAGCGATGGTCCCAACAGGTACAATGACCTCTGGGGACCAAGTTCAGTTCTTGGTGAGTTCTCCAGTGCCTCTCGATGTAGGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS TCA 72 bp GTGTTGGTCGTCTTTTCTTCCGGGACCTTGGTTCCCTaGCTGATCTTGGCCCTCTCAAATTTCTGCCGCAGT +
Preference number: 6 (lower is better)
Translates to: VLVVFSSGTLVP*LILALSNFCRS
Trigger: ACTGCGGCAGAAATTTGAGAGGGCCAAGATCAGTCAGGGAACCAAGGTCCCGGAAGAAAAGACGACCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS GCA 72 bp CCACACAGGCTGGGAACATTCATCACGCAGCGCTTGTaGACATTCATCATGCAGGTGTCACATTTCATCCCC +
Preference number: 6 (lower is better)
Translates to: PHRLGTFITQRL*TFIMQVSHFIP
Trigger: GGGGATGAAATGTGACACCTGCATGATGAATGTGCACAAGCGCTGCGTGATGAATGTTCCCAGCCTGTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321728.12
ENST00000486868.1
ENST00000643927.1
ENST00000647422.1
CDS CCA 72 bp GGTGGCACAGGCACATTGAAGTACTCGCCTTCCTCCTaGCTCAGTAACTTAAACCAGCCATCAACACTGGCT +
Preference number: 6 (lower is better)
Translates to: GGTGTLKYSPSS*LSNLNQPSTLA
Trigger: AGCCAGTGTTGATGGCTGGTTTAAGTTACTGAGCCAGGAGGAAGGCGAGTACTTCAATGTGCCTGTGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000498739.1
ENST00000643927.1
CDS CCA 72 bp TTTCTGCCGCAGTTCTTCATTGGCCTCACTTCCTTCTaGTGGCACAGGCACATTGAAGTACTCGCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: FLPQFFIGLTSF*WHRHIEVLAFL
Trigger: GAGGAAGGCGAGTACTTCAATGTGCCTGTGCCACCAGAAGGAAGTGAGGCCAATGAAGAACTGCGGCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000498739.1
ENST00000643927.1
CDS CCA 72 bp GAGCATGCCAACGGTTCATCCTACATCGAGAGGCACTaGAGAACTCACCAAGAACTGAACTTGGTCCCCAGA +
Preference number: 6 (lower is better)
Translates to: EHANGSSYIERH*RTHQELNLVPR
Trigger: TCTGGGGACCAAGTTCAGTTCTTGGTGAGTTCTCCAGTGCCTCTCGATGTAGGATGAACCGTTGGCATGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS CAA 72 bp GTGGGGGTCAGTTCCACAGGCTGTCTGGTGAACTCTTaGTCGAAGTTGGAGGTGTCTCTCTTGTCTCTAGCT +
Preference number: 6 (lower is better)
Translates to: VGVSSTGCLVNS*SKLEVSLLSLA
Trigger: AGCTAGAGACAAGAGAGACACCTCCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGGAACTGACCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000321728.12
CDS CAA 90 bp CGCAGTTCTTCATTGGCCTCACTTCCTTCTGGTGGCACAGGCACATaGAAGTACTCGCCTTCCTCCTGGCTCAGTAACTTAAACCAGCCA +
Preference number: 6 (lower is better)
Translates to: RSSSLASLPSGGTGT*KYSPSSWLSNLNQP
Trigger: TGGCTGGTTTAAGTTACTGAGCCAGGAGGAAGGCGAGTACTTCAATGTGCCTGTGCCACCAGAAGGAAGTGAGGCCAATGAAGAACTGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000498739.1
ENST00000643927.1
CDS TCA 72 bp TGGTCGTCTTTTCTTCCGGGACCTTGGTTCCCTGACTaGTCTTGGCCCTCTCAAATTTCTGCCGCAGTTCTT +
Preference number: 6 (lower is better)
Translates to: WSSFLPGPWFPD*SWPSQISAAVL
Trigger: AAGAACTGCGGCAGAAATTTGAGAGGGCCAAGATCAGTCAGGGAACCAAGGTCCCGGAAGAAAAGACGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS GCA 72 bp GAGAGCATCTGTATCTTTGCTGGAAATCGAGAAGGGTaGTATCCACACAGCAGGGACTTCCAGGGATTCCAG +
Preference number: 6 (lower is better)
Translates to: ESICIFAGNREG*YPHSRDFQGFQ
Trigger: CTGGAATCCCTGGAAGTCCCTGCTGTGTGGATAGCACCCTTCTCGATTTCCAGCAAAGATACAGATGCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482000.2
CDS CCA 72 bp TCTGCTCACGTTCCATTGGCCAATGCTCCACATCAGTaGGAAGGAAAGTGTGTCCCTTCAGATGAAGTCGGT +
Preference number: 6 (lower is better)
Translates to: SAHVPLANAPHQ*EGKCVPSDEVG
Trigger: ACCGACTTCATCTGAAGGGACACACTTTCCTTCCCACTGATGTGGAGCATTGGCCAATGGAACGTGAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498058.1
CDS CCA 72 bp TCGAATTCTGATTGGTCAATATTCCTGATGACTTCCTaGTCGGGAGGTGTTAGGACTGGTGGATGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: SNSDWSIFLMTS*SGGVRTGGWRV
Trigger: CACCCGCCATCCACCAGTCCTAACACCTCCCGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS CAA 72 bp GTGCCACACAGGCTGGGAACATTCATCACGCAGCGCTaGTGCACATTCATCATGCAGGTGTCACATTTCATC +
Preference number: 6 (lower is better)
Translates to: VPHRLGTFITQR*CTFIMQVSHFI
Trigger: GATGAAATGTGACACCTGCATGATGAATGTGCACAAGCGCTGCGTGATGAATGTTCCCAGCCTGTGTGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321728.12
ENST00000486868.1
ENST00000643927.1
ENST00000647422.1
CDS CAA 72 bp TCATTGGCCTCACTTCCTTCTGGTGGCACAGGCACATaGAAGTACTCGCCTTCCTCCTGGCTCAGTAACTTA +
Preference number: 6 (lower is better)
Translates to: SLASLPSGGTGT*KYSPSSWLSNL
Trigger: TAAGTTACTGAGCCAGGAGGAAGGCGAGTACTTCAATGTGCCTGTGCCACCAGAAGGAAGTGAGGCCAATGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000498739.1
ENST00000643927.1
CDS CAA 72 bp ATCGAGAGGCACTGGAGAACTCACCAAGAACTGAACTaGGTCCCCAGAGGTCATTGTACCTGTTGGGACCAT +
Preference number: 6 (lower is better)
Translates to: IERHWRTHQELN*VPRGHCTCWDH
Trigger: ATGGTCCCAACAGGTACAATGACCTCTGGGGACCAAGTTCAGTTCTTGGTGAGTTCTCCAGTGCCTCTCGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486868.1
CDS CAA 90 bp GGCTGCCATATTGCTGGCAGAAACCTTCATGCCATGGCCAATTTATaGGCTCCAAGTCCAGTAAGTTTTCTTGGCTTCTCCCTCTGCTCC +
Preference number: 6 (lower is better)
Translates to: GCHIAGRNLHAMANL*APSPVSFLGFSLCS
Trigger: GGAGCAGAGGGAGAAGCCAAGAAAACTTACTGGACTTGGAGCCAATAAATTGGCCATGGCATGAAGGTTTCTGCCAGCAATATGGCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS TCA 72 bp GAAAGTACAGATGGATTCAAAGGGTGGTTTAGAGGGTaGTGGGGTTGCCTTAAGGACAAACTGGGGGTAGGC +
Preference number: 6 (lower is better)
Translates to: ESTDGFKGWFRG*WGCLKDKLGVG
Trigger: GCCTACCCCCAGTTTGTCCTTAAGGCAACCCCATCACCCTCTAAACCACCCTTTGAATCCATCTGTACTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487674.1
CDS CCA 72 bp ATGACTTCCTGGTCGGGAGGTGTTAGGACTGGTGGATaGCGGGTGAAAAATCGGTCGAAGTTTTCAGCATTT +
Preference number: 6 (lower is better)
Translates to: MTSWSGGVRTGG*RVKNRSKFSAF
Trigger: AAATGCTGAAAACTTCGACCGATTTTTCACCCGCCATCCACCAGTCCTAACACCTCCCGACCAGGAAGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS CAA 72 bp ACCCGGCAGTCAGAGAGAATGGGCTACTTACAGCTTTaGGCTTATAAGGGGGCTGGATCTCTTTGCGTTCAA +
Preference number: 6 (lower is better)
Translates to: TRQSERMGYLQL*AYKGAGSLCVQ
Trigger: TTGAACGCAAAGAGATCCAGCCCCCTTATAAGCCAAAAGCTGTAAGTAGCCCATTCTCTCTGACTGCCGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS CAA 90 bp TGTGTGAATACCCGGCAGTCAGAGAGAATGGGCTACTTACAGCTTTaGGCTTATAAGGGGGCTGGATCTCTTTGCGTTCAAGTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: CVNTRQSERMGYLQL*AYKGAGSLCVQVSP
Trigger: GGGAGAAACTTGAACGCAAAGAGATCCAGCCCCCTTATAAGCCAAAAGCTGTAAGTAGCCCATTCTCTCTGACTGCCGGGTATTCACACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS TCA 72 bp GGAAAACATGAGGCACAGGCAAGAATACCTTGTGTGTaGATACCCGGCAGTCAGAGAGAATGGGCTACTTAC +
Preference number: 6 (lower is better)
Translates to: GKHEAQARIPCV*IPGSQREWATY
Trigger: GTAAGTAGCCCATTCTCTCTGACTGCCGGGTATTCACACACAAGGTATTCTTGCCTGTGCCTCATGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS GCA 72 bp TGGAATGGGCTGCCATATTGCTGGCAGAAACCTTCATaGCATGGCCAATTTATTGGCTCCAAGTCCAGTAAG +
Preference number: 6 (lower is better)
Translates to: WNGLPYCWQKPS*HGQFIGSKSSK
Trigger: CTTACTGGACTTGGAGCCAATAAATTGGCCATGGCATGAAGGTTTCTGCCAGCAATATGGCAGCCCATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS CCA 72 bp ACAGCAGGGACTTCCAGGGATTCCAGCCATCAACACTaGCTTTCTGAAGTTCAGAAATCCCAAAGGACAAAG +
Preference number: 6 (lower is better)
Translates to: TAGTSRDSSHQH*LSEVQKSQRTK
Trigger: CTTTGTCCTTTGGGATTTCTGAACTTCAGAAAGCCAGTGTTGATGGCTGGAATCCCTGGAAGTCCCTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482000.2
CDS CAA 90 bp AAATCGGTCAGTTTCATCCGGTCTCTGTTGCCATTGTTGTCAAATTaGGAGACAGTGTTGGTCGTCTTTTCTTCCGGGACCTTGGTTCCC +
Preference number: 6 (lower is better)
Translates to: KSVSFIRSLLPLLSN*ETVLVVFSSGTLVP
Trigger: GGGAACCAAGGTCCCGGAAGAAAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACTGACCGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS CAA 90 bp AGTTTATCAGTGGGGGTCAGTTCCACAGGCTGTCTGGTGAACTCTTaGTCGAAGTTGGAGGTGTCTCTCTTGTCTCTAGCTTTTGGCTTA +
Preference number: 6 (lower is better)
Translates to: SLSVGVSSTGCLVNS*SKLEVSLLSLAFGL
Trigger: TAAGCCAAAAGCTAGAGACAAGAGAGACACCTCCAACTTCGACAAAGAGTTCACCAGACAGCCTGTGGAACTGACCCCCACTGATAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000321728.12
CDS TCA 72 bp CTCCTCTTAGAGCAAACAGTCTCCTGTTTGAGGCTCTaGACCATCATTGGTGACACAGTCCACCGAGATTTT +
Preference number: 6 (lower is better)
Translates to: LLLEQTVSCLRL*TIIGDTVHRDF
Trigger: AAAATCTCGGTGGACTGTGTCACCAATGATGGTTCAGAGCCTCAAACAGGAGACTGTTTGCTCTAAGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS CCA 72 bp GTTTCATCCGGTCTCTGTTGCCATTGTTGTCAAATTTaGAGACAGTGTTGGTCGTCTTTTCTTCCGGGACCT +
Preference number: 6 (lower is better)
Translates to: VSSGLCCHCCQI*RQCWSSFLPGP
Trigger: AGGTCCCGGAAGAAAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS CCA 72 bp CCTTTCTTGGTCTTGTGGCAGAGGTGGGAAGAACAATaGCTAAACCACACAATAGCTTCTCAAAGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: PFLVLWQRWEEQ*LNHTIASQSLC
Trigger: ACAGAGGCTTTGAGAAGCTATTGTGTGGTTTAGCCATTGTTCTTCCCACCTCTGCCACAAGACCAAGAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498058.1
CDS CCA 72 bp TTTTTGAGGAGAAGAGAAAGGATTCAGGTAGTGGACTaGAGAGGAGTTGTCCAAAGATCTCAGCAGGGTCTC +
Preference number: 6 (lower is better)
Translates to: FLRRRERIQVVD*RGVVQRSQQGL
Trigger: GAGACCCTGCTGAGATCTTTGGACAACTCCTCTCCAGTCCACTACCTGAATCCTTTCTCTTCTCCTCAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS CCA 72 bp GAAAATGGAAAGAGCTGGAATGGGCTGCCATATTGCTaGCAGAAACCTTCATGCCATGGCCAATTTATTGGC +
Preference number: 6 (lower is better)
Translates to: ENGKSWNGLPYC*QKPSCHGQFIG
Trigger: GCCAATAAATTGGCCATGGCATGAAGGTTTCTGCCAGCAATATGGCAGCCCATTCCAGCTCTTTCCATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS CAA 72 bp AGTTTCATCCGGTCTCTGTTGCCATTGTTGTCAAATTaGGAGACAGTGTTGGTCGTCTTTTCTTCCGGGACC +
Preference number: 6 (lower is better)
Translates to: SFIRSLLPLLSN*ETVLVVFSSGT
Trigger: GGTCCCGGAAGAAAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS CAA 90 bp AGGAAGTTAAAATCGGTCAGTTTCATCCGGTCTCTGTTGCCATTGTaGTCAAATTTGGAGACAGTGTTGGTCGTCTTTTCTTCCGGGACC +
Preference number: 6 (lower is better)
Translates to: RKLKSVSFIRSLLPL*SNLETVLVVFSSGT
Trigger: GGTCCCGGAAGAAAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACTGACCGATTTTAACTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS CAA 90 bp CGTTCAAGTTTCTCCCAATCAATATACCGGAAAAATGCATGCTCTTaGATATCACGTTCGCCTTCAGGTCCACAACCCAGACGTTTGCCT +
Preference number: 6 (lower is better)
Translates to: RSSFSQSIYRKNACS*ISRSPSGPQPRRLP
Trigger: AGGCAAACGTCTGGGTTGTGGACCTGAAGGCGAACGTGATATCAAAGAGCATGCATTTTTCCGGTATATTGATTGGGAGAAACTTGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000466124.1
ENST00000643927.1
CDS TCA 72 bp TCAAATGTAGGGTCCACAAGCAAGAGAAAGAAGTACTaGGGTCCTCTCTGTGAGTCTCCTCTTAGAGCAAAC +
Preference number: 6 (lower is better)
Translates to: SNVGSTSKRKKY*GPLCESPLRAN
Trigger: GTTTGCTCTAAGAGGAGACTCACAGAGAGGACCTCAGTACTTCTTTCTCTTGCTTGTGGACCCTACATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS TCA 72 bp TTGCTTCAGCTAATGACTGTTCTGAAAATGCAGCTCTaGCTGTGCCACTTGAATGCTGAAAGCCCTTCAGTG +
Preference number: 6 (lower is better)
Translates to: LLQLMTVLKMQL*LCHLNAESPSV
Trigger: CACTGAAGGGCTTTCAGCATTCAAGTGGCACAGTCAGAGCTGCATTTTCAGAACAGTCATTAGCTGAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472066.1
CDS CAA 72 bp ATTGCTGGCAGAAACCTTCATGCCATGGCCAATTTATaGGCTCCAAGTCCAGTAAGTTTTCTTGGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: IAGRNLHAMANL*APSPVSFLGFS
Trigger: GGAGAAGCCAAGAAAACTTACTGGACTTGGAGCCAATAAATTGGCCATGGCATGAAGGTTTCTGCCAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645517.1
CDS TCA 72 bp ATTCCTGCTGGTCAAATCCCAATCCCAAATCTCTACTaGCAGTCTTCTGTCTTTGTCCGATTCTTTCAGCTG +
Preference number: 6 (lower is better)
Translates to: IPAGQIPIPNLY*QSSVFVRFFQL
Trigger: CAGCTGAAAGAATCGGACAAAGACAGAAGACTGTCAGTAGAGATTTGGGATTGGGATTTGACCAGCAGGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000321728.12
ENST00000482000.2
ENST00000498739.1
ENST00000643927.1
CDS TCA 72 bp AGATGGAAAGTACAGCAGTGTTCACTTACCGGTAAATaGTGCCCTTACTCTGTAAGAAGAACAGACCGATGG +
Preference number: 6 (lower is better)
Translates to: RWKVQQCSLTGK*CPYSVRRTDRW
Trigger: CCATCGGTCTGTTCTTCTTACAGAGTAAGGGCATCATTTACCGGTAAGTGAACACTGCTGTACTTTCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463752.1
CDS CAA 72 bp TTCTCCCAATCAATATACCGGAAAAATGCATGCTCTTaGATATCACGTTCGCCTTCAGGTCCACAACCCAGA +
Preference number: 6 (lower is better)
Translates to: FSQSIYRKNACS*ISRSPSGPQPR
Trigger: TCTGGGTTGTGGACCTGAAGGCGAACGTGATATCAAAGAGCATGCATTTTTCCGGTATATTGATTGGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000466124.1
ENST00000643927.1
CDS CAA 90 bp ATTAGGAAGTTAAAATCGGTCAGTTTCATCCGGTCTCTGTTGCCATaGTTGTCAAATTTGGAGACAGTGTTGGTCGTCTTTTCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: IRKLKSVSFIRSLLP*LSNLETVLVVFSSG
Trigger: CCCGGAAGAAAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACTGACCGATTTTAACTTCCTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS GCA 72 bp CACAAGCTTTTGGCTTATAAGGGGGCTGGATCTCTTTaGGTTCAAGTTTCTCCCAATCAATATACCGGAAAA +
Preference number: 6 (lower is better)
Translates to: HKLLAYKGAGSL*VQVSPNQYTGK
Trigger: TTTTCCGGTATATTGATTGGGAGAAACTTGAACGCAAAGAGATCCAGCCCCCTTATAAGCCAAAAGCTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS CAA 72 bp AAATCGGTCAGTTTCATCCGGTCTCTGTTGCCATTGTaGTCAAATTTGGAGACAGTGTTGGTCGTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: KSVSFIRSLLPL*SNLETVLVVFS
Trigger: AGAAAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACTGACCGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS CAA 72 bp AGGAAGTTAAAATCGGTCAGTTTCATCCGGTCTCTGTaGCCATTGTTGTCAAATTTGGAGACAGTGTTGGTC +
Preference number: 6 (lower is better)
Translates to: RKLKSVSFIRSL*PLLSNLETVLV
Trigger: GACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACTGACCGATTTTAACTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS CAA 90 bp AGCACCATTAGGAAGTTAAAATCGGTCAGTTTCATCCGGTCTCTGTaGCCATTGTTGTCAAATTTGGAGACAGTGTTGGTCGTCTTTTCT +
Preference number: 6 (lower is better)
Translates to: STIRKLKSVSFIRSL*PLLSNLETVLVVFS
Trigger: AGAAAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACTGACCGATTTTAACTTCCTAATGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS GCA 72 bp TCAAGTTTCTCCCAATCAATATACCGGAAAAATGCATaGTCTTTGATATCACGTTCGCCTTCAGGTCCACAA +
Preference number: 6 (lower is better)
Translates to: SSFSQSIYRKNA*SLISRSPSGPQ
Trigger: TTGTGGACCTGAAGGCGAACGTGATATCAAAGAGCATGCATTTTTCCGGTATATTGATTGGGAGAAACTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321728.12
ENST00000466124.1
ENST00000643927.1
CDS GCA 72 bp TTACAGCTTTTGGCTTATAAGGGGGCTGGATCTCTTTaGGTTCAAGTTTCTCCCAATCAATATACCGGAAAA +
Preference number: 6 (lower is better)
Translates to: LQLLAYKGAGSL*VQVSPNQYTGK
Trigger: TTTTCCGGTATATTGATTGGGAGAAACTTGAACGCAAAGAGATCCAGCCCCCTTATAAGCCAAAAGCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS CCA 72 bp TCAGAGTTAACAAAGGAAAATCCTTCGAATTCTGATTaGTCAATATTCCTGATGACTTCCTGGTCGGGAGGT +
Preference number: 6 (lower is better)
Translates to: SELTKENPSNSD*SIFLMTSWSGG
Trigger: ACCTCCCGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGAAGGATTTTCCTTTGTTAACTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1
CDS CAA 72 bp TTAAAATCGGTCAGTTTCATCCGGTCTCTGTTGCCATaGTTGTCAAATTTGGAGACAGTGTTGGTCGTCTTT +
Preference number: 6 (lower is better)
Translates to: LKSVSFIRSLLP*LSNLETVLVVF
Trigger: AAAGACGACCAACACTGTCTCCAAATTTGACAACAATGGCAACAGAGACCGGATGAAACTGACCGATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321728.12
ENST00000643927.1
CDS CCA 72 bp GTCGTTTCCATCTTTATAGAGACTAAGCTGGGCCAATaGAAAATGTCCATCTTAGTAACCAGTGATTTTGTG +
Preference number: 6 (lower is better)
Translates to: VVSIFIETKLGQ*KMSILVTSDFV
Trigger: CACAAAATCACTGGTTACTAAGATGGACATTTTCCATTGGCCCAGCTTAGTCTCTATAAAGATGGAAACGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000466124.1
CDS CCA 72 bp CAGAAGTTCAGCAATTGTATAGTGGAGAAGGGGACATaGGATATGATGAACTGGATGAAGGATTATAGTTTC +
Preference number: 6 (lower is better)
Translates to: QKFSNCIVEKGT*DMMNWMKDYSF
Trigger: GAAACTATAATCCTTCATCCAGTTCATCATATCCCATGTCCCCTTCTCCACTATACAATTGCTGAACTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487674.1
CDS TCA 72 bp AAATTCAGAGTTAACAAAGGAAAATCCTTCGAATTCTaGTTGGTCAATATTCCTGATGACTTCCTGGTCGGG +
Preference number: 6 (lower is better)
Translates to: KFRVNKGKSFEF*LVNIPDDFLVG
Trigger: CCCGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGAAGGATTTTCCTTTGTTAACTCTGAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643927.1