RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKCA (Homo sapiens)

Ensembl gene IDs: ENSG00000154229

Ensembl transcript IDs: ENST00000284384.6, ENST00000413366.8, ENST00000578063.5, ENST00000583361.1

Found 696 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCCAGGCGGCCTAGACCTCCACAGGCCCTGGCAATCAGGCAGTaGTCAGGGGCAAGGACTTCCCAAAGCATCCCCCAGGGACCTCCT +
Preference number: 1 (lower is better)
Translates to: SARRPRPPQALAIRQ*SGARTSQSIPQGPP
Trigger: AGGAGGTCCCTGGGGGATGCTTTGGGAAGTCCTTGCCCCTGAGCACTGCCTGATTGCCAGGGCCTGTGGAGGTCTAGGCCGCCTGGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp GGGCAAGGACTTCCCAAAGCATCCCCCAGGGACCTCCTGCGTGGCTaGGGCAGTTCCACAGCGCACCCCTCGCCACCATCTCATTTCACA +
Preference number: 1 (lower is better)
Translates to: GQGLPKASPRDLLRG*GSSTAHPSPPSHFT
Trigger: TGTGAAATGAGATGGTGGCGAGGGGTGCGCTGTGGAACTGCCGCAGCCACGCAGGAGGTCCCTGGGGGATGCTTTGGGAAGTCCTTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp GACCTTCAATTGAAATGCCAAGAGACGGGCTGCCAGCCCACGGCCTaGAGCCTCAGGGAAAGGCCCTGCCACCGAGGAGTGGCCACCTTC +
Preference number: 1 (lower is better)
Translates to: DLQLKCQETGCQPTA*SLRERPCHRGVATF
Trigger: GAAGGTGGCCACTCCTCGGTGGCAGGGCCTTTCCCTGAGGCTGCAGGCCGTGGGCTGGCAGCCCGTCTCTTGGCATTTCAATTGAAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp GGGTCCCTAACCTCATGTGTTCCTCCGTGGGATCTTCCTCCTCTCTaGGGGGCCTCGTGGGGGTCTGTCCTGCTGCTGCTCCATTCTGGG +
Preference number: 1 (lower is better)
Translates to: GSLTSCVPPWDLPPL*GASWGSVLLLLHSG
Trigger: CCCAGAATGGAGCAGCAGCAGGACAGACCCCCACGAGGCCCCCCAGAGAGGAGGAAGATCCCACGGAGGAACACATGAGGTTAGGGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp AACCCAGCACCTGGTGACCTTCAATTGAAATGCCAAGAGACGGGCTaGCAGCCCACGGCCTGCAGCCTCAGGGAAAGGCCCTGCCACCGA +
Preference number: 1 (lower is better)
Translates to: NPAPGDLQLKCQETG*QPTACSLRERPCHR
Trigger: TCGGTGGCAGGGCCTTTCCCTGAGGCTGCAGGCCGTGGGCTGGCAGCCCGTCTCTTGGCATTTCAATTGAAGGTCACCAGGTGCTGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp GGACCAGGCGGGTCTGGGCACAGAGCCAAGGAAGCATCCTCCTCCTaGCAAAAGATGGCCACAGAGCCTCACGGAGCAAGGAAAGGGGTC +
Preference number: 1 (lower is better)
Translates to: GPGGSGHRAKEASSS*QKMATEPHGARKGV
Trigger: GACCCCTTTCCTTGCTCCGTGAGGCTCTGTGGCCATCTTTTGGCAGGAGGAGGATGCTTCCTTGGCTCTGTGCCCAGACCCGCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp CTGGCCGGGCCCGTTCCCTACCCCGTCTCTCCTTCTACTCAGGGTTaGCAGGACCACCTGGGCCTCTCACCTCAAAAAGCCTTTCATGGT +
Preference number: 1 (lower is better)
Translates to: LAGPVPYPVSPSTQG*QDHLGLSPQKAFHG
Trigger: ACCATGAAAGGCTTTTTGAGGTGAGAGGCCCAGGTGGTCCTGGCAACCCTGAGTAGAAGGAGAGACGGGGTAGGGAACGGGCCCGGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp GAGGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATaGGAAGCCGTTGACGGTGGCACCCCTTCCTCTCCCTCCTACTGC +
Preference number: 1 (lower is better)
Translates to: EGQQTETSICTNHLR*EAVDGGTPSSPSYC
Trigger: GCAGTAGGAGGGAGAGGAAGGGGTGCCACCGTCAACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp GGTCTGGGCACAGAGCCAAGGAAGCATCCTCCTCCTGCCAAAAGATaGCCACAGAGCCTCACGGAGCAAGGAAAGGGGTCCCAGAAACCC +
Preference number: 1 (lower is better)
Translates to: GLGTEPRKHPPPAKR*PQSLTEQGKGSQKP
Trigger: GGGTTTCTGGGACCCCTTTCCTTGCTCCGTGAGGCTCTGTGGCCATCTTTTGGCAGGAGGAGGATGCTTCCTTGGCTCTGTGCCCAGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp CTTGCATGGGGGTGTCTCACCAAAGCAGCGCGCTCCTCCCAAGACTaGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: LAWGCLTKAARSSQD*KGQCHNGWKKVRSL
Trigger: GAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGCGCTGCTTTGGTGAGACACCCCCATGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp TCTTGCCTGGATGTGGGCCTCTCATTAACCTTGGAGGGCGGCCCCTaGCAGCACTCCAGTGACTTCCTTTCAAACCCAGCACCTGGTGAC +
Preference number: 1 (lower is better)
Translates to: SCLDVGLSLTLEGGP*QHSSDFLSNPAPGD
Trigger: GTCACCAGGTGCTGGGTTTGAAAGGAAGTCACTGGAGTGCTGCCAGGGGCCGCCCTCCAAGGTTAATGAGAGGCCCACATCCAGGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp TCTGAATCTTCACCCAAGGTGAGAGACCTGGGGACCAGGCGGGTCTaGGCACAGAGCCAAGGAAGCATCCTCCTCCTGCCAAAAGATGGC +
Preference number: 1 (lower is better)
Translates to: SESSPKVRDLGTRRV*AQSQGSILLLPKDG
Trigger: GCCATCTTTTGGCAGGAGGAGGATGCTTCCTTGGCTCTGTGCCCAGACCCGCCTGGTCCCCAGGTCTCTCACCTTGGGTGAAGATTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp TGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTaGAAAGCACGTGCTGGTGCCTGCAGGGCACGGCTGTGTTGGTCT +
Preference number: 1 (lower is better)
Translates to: WKGQCHNGWKKVRSL*KARAGACRARLCWS
Trigger: AGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp TTCTCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTaGACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAACCAGAGCTG +
Preference number: 1 (lower is better)
Translates to: FSLFRLGQGSHANTS*TKTSGLALEAQPEL
Trigger: CAGCTCTGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR GCA 90 bp AGCAAACGACAGGTCGTTGCAGAGGCAGCAAGACAGCATGCTTCCTaGGTGTCCAGTACACACAGCAAGAGGGGAGTCTCCCCATCCCTC +
Preference number: 1 (lower is better)
Translates to: SKRQVVAEAARQHAS*VSSTHSKRGVSPSL
Trigger: GAGGGATGGGGAGACTCCCCTCTTGCTGTGTGTACTGGACACGCAGGAAGCATGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp ATGCTGGAGCAAACGACAGGTCGTTGCAGAGGCAGCAAGACAGCATaGTTCCTGCGTGTCCAGTACACACAGCAAGAGGGGAGTCTCCCC +
Preference number: 1 (lower is better)
Translates to: MLEQTTGRCRGSKTA*FLRVQYTQQEGSLP
Trigger: GGGGAGACTCCCCTCTTGCTGTGTGTACTGGACACGCAGGAAGCATGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp TGCTGGTGCCTGCAGGGCACGGCTGTGTTGGTCTCACGAAGTTTGTaGATGCTGGAGCAAACGACAGGTCGTTGCAGAGGCAGCAAGACA +
Preference number: 1 (lower is better)
Translates to: CWCLQGTAVLVSRSL*MLEQTTGRCRGSKT
Trigger: TGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp CGATGGGAAGCCGTTGACGGTGGCACCCCTTCCTCTCCCTCCTACTaGAGGCATATTTCTGGATGCACCCAAACCCTGTTCTTCTCTGGC +
Preference number: 1 (lower is better)
Translates to: RWEAVDGGTPSSPSY*RHISGCTQTLFFSG
Trigger: GCCAGAGAAGAACAGGGTTTGGGTGCATCCAGAAATATGCCTGCAGTAGGAGGGAGAGGAAGGGGTGCCACCGTCAACGGCTTCCCATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp CTGGCAAAACACTCTCTTGAGGGCCAGCAGACAGAAACTTCCATCTaGACCAACCACCTCCGATGGGAAGCCGTTGACGGTGGCACCCCT +
Preference number: 1 (lower is better)
Translates to: LAKHSLEGQQTETSI*TNHLRWEAVDGGTP
Trigger: AGGGGTGCCACCGTCAACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCCTCAAGAGAGTGTTTTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp GCCTGCAGGGCACGGCTGTGTTGGTCTCACGAAGTTTGTGCATGCTaGAGCAAACGACAGGTCGTTGCAGAGGCAGCAAGACAGCATGCT +
Preference number: 1 (lower is better)
Translates to: ACRARLCWSHEVCAC*SKRQVVAEAARQHA
Trigger: AGCATGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp CCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTaGTGCCTGCAGGGCACGGCTGTGTTGGTCTCACGAAGTTTGTGC +
Preference number: 1 (lower is better)
Translates to: PQWLEESPQPLKSTC*CLQGTAVLVSRSLC
Trigger: GCACAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp CAAAGCAGCGCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATaGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGC +
Preference number: 1 (lower is better)
Translates to: QSSALLPRLERPMPQ*LEESPQPLKSTCWC
Trigger: GCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGCGCTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp GACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTaGCGGTGGCACCCCTTCCTCTCCCTCCTACTGCAGGCATATTTC +
Preference number: 1 (lower is better)
Translates to: DRNFHLHQPPPMGSR*RWHPFLSLLLQAYF
Trigger: GAAATATGCCTGCAGTAGGAGGGAGAGGAAGGGGTGCCACCGTCAACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp AGTGGGCAAAATCCTTACAGGGCATCTCTGAATCTTCACCCAAGGTaGGAGACCTGGGGACCAGGCGGGTCTGGGCACAGAGCCAAGGAA +
Preference number: 1 (lower is better)
Translates to: SGQNPYRASLNLHPR*ETWGPGGSGHRAKE
Trigger: TTCCTTGGCTCTGTGCCCAGACCCGCCTGGTCCCCAGGTCTCTCACCTTGGGTGAAGATTCAGAGATGCCCTGTAAGGATTTTGCCCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp CAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTaGCTGCAGGGCACGGCTGTGTTGGTCTCACGAAGTTTGTGCATG +
Preference number: 1 (lower is better)
Translates to: QWLEESPQPLKSTCW*LQGTAVLVSRSLCM
Trigger: CATGCACAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp ATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTaGTGGTGCCTGCAGGGCACGGCTGTGTTGGTCTCACGAAGTTTG +
Preference number: 1 (lower is better)
Translates to: MPQWLEESPQPLKST*WCLQGTAVLVSRSL
Trigger: CAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp GGTGGCACCCCTTCCTCTCCCTCCTACTGCAGGCATATTTCTGGATaGACCCAAACCCTGTTCTTCTCTGGCTCCTTCCTGACTACAGCC +
Preference number: 1 (lower is better)
Translates to: GGTPSSPSYCRHISG*TQTLFFSGSFLTTA
Trigger: GGCTGTAGTCAGGAAGGAGCCAGAGAAGAACAGGGTTTGGGTGCATCCAGAAATATGCCTGCAGTAGGAGGGAGAGGAAGGGGTGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp GACTTTGGCTCCGAGAGGTGCTCAACAATCATTTGTTGGGCTGCATaGACCTTGGTCTTTCCGGCCAGGCTTCCAGAGCTCTTGGCCCCA +
Preference number: 1 (lower is better)
Translates to: DFGSERCSTIICWAA*TLVFPARLPELLAP
Trigger: TGGGGCCAAGAGCTCTGGAAGCCTGGCCGGAAAGACCAAGGTTCATGCAGCCCAACAAATGATTGTTGAGCACCTCTCGGAGCCAAAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp CACACACACACGCACACACAAAGGTCAGCCCAGGTGCTGCGGCAATaGCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGACACT +
Preference number: 1 (lower is better)
Translates to: HTHTHTQRSAQVLRQ*HVCTNVLGRLESDT
Trigger: AGTGTCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACCTGGGCTGACCTTTGTGTGTGCGTGTGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp CTGAACGTGATCCACTTTGAAGGGGGCGTTTCTCCCTCTTTCGCCTaGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGTCAG +
Preference number: 1 (lower is better)
Translates to: LNVIHFEGGVSPSFA*VREVTPTPAALKRQ
Trigger: CTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGAGAAACGCCCCCTTCAAAGTGGATCACGTTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR CCA 90 bp CTGTTTCTGTTTGTGGTAGAACCCGGCTACTCTGAGGACCTTGCATaGGGGTGTCTCACCAAAGCAGCGCGCTCCTCCCAAGACTGGAAA +
Preference number: 1 (lower is better)
Translates to: LFLFVVEPGYSEDLA*GCLTKAARSSQDWK
Trigger: TTTCCAGTCTTGGGAGGAGCGCGCTGCTTTGGTGAGACACCCCCATGCAAGGTCCTCAGAGTAGCCGGGTTCTACCACAAACAGAAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp TTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTaGTCAGGACACGAACCCAGATCATGCACTGACCTGCAGGGCTGC +
Preference number: 1 (lower is better)
Translates to: FYKPVPFPSDQRRST*SGHEPRSCTDLQGC
Trigger: GCAGCCCTGCAGGTCAGTGCATGATCTGGGTTCGTGTCCTGACCAGGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp AGGAGTGGCCACCTTCCAAGGGAAGATAATGCAGAGCCATTTGAATaGCCTGGTGTGGTCATAGCTCCATGGGTCCTGCGGGGATTCGGA +
Preference number: 1 (lower is better)
Translates to: RSGHLPREDNAEPFE*PGVVIAPWVLRGFG
Trigger: TCCGAATCCCCGCAGGACCCATGGAGCTATGACCACACCAGGCCATTCAAATGGCTCTGCATTATCTTCCCTTGGAAGGTGGCCACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp AAAGGGCAGACAGTGGCCCTGCATGGACCACACGAGGCCAGTGGATaGAAGGAAGGGAAGCACTGCCGGAGCAATAATTTTGACTCCTGT +
Preference number: 1 (lower is better)
Translates to: KGQTVALHGPHEASG*KEGKHCRSNNFDSC
Trigger: ACAGGAGTCAAAATTATTGCTCCGGCAGTGCTTCCCTTCCTTTCATCCACTGGCCTCGTGTGGTCCATGCAGGGCCACTGTCTGCCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp GTATTTCTGAGTTGCCCAGTGGGCAAAATCCTTACAGGGCATCTCTaGATCTTCACCCAAGGTGAGAGACCTGGGGACCAGGCGGGTCTG +
Preference number: 1 (lower is better)
Translates to: VFLSCPVGKILTGHL*IFTQGERPGDQAGL
Trigger: CAGACCCGCCTGGTCCCCAGGTCTCTCACCTTGGGTGAAGATTCAGAGATGCCCTGTAAGGATTTTGCCCACTGGGCAACTCAGAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp GCTCCGAGAGGTGCTCAACAATCATTTGTTGGGCTGCATGAACCTTaGTCTTTCCGGCCAGGCTTCCAGAGCTCTTGGCCCCATGGTTTT +
Preference number: 1 (lower is better)
Translates to: APRGAQQSFVGLHEP*SFRPGFQSSWPHGF
Trigger: AAAACCATGGGGCCAAGAGCTCTGGAAGCCTGGCCGGAAAGACCAAGGTTCATGCAGCCCAACAAATGATTGTTGAGCACCTCTCGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp GCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTaGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAGTGGGAGA +
Preference number: 1 (lower is better)
Translates to: ASVGQVPPELAVIPT*TPYPRSMGKSGSGR
Trigger: TCTCCCACTGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp AGCTACTTTCATTCTGTTTCTGTTTGTGGTAGAACCCGGCTACTCTaGGGACCTTGCATGGGGGTGTCTCACCAAAGCAGCGCGCTCCTC +
Preference number: 1 (lower is better)
Translates to: SYFHSVSVCGRTRLL*GPCMGVSHQSSALL
Trigger: GAGGAGCGCGCTGCTTTGGTGAGACACCCCCATGCAAGGTCCTCAGAGTAGCCGGGTTCTACCACAAACAGAAACAGAATGAAAGTAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp TTGGTCTCACGAAGTTTGTGCATGCTGGAGCAAACGACAGGTCGTTaGAGAGGCAGCAAGACAGCATGCTTCCTGCGTGTCCAGTACACA +
Preference number: 1 (lower is better)
Translates to: LVSRSLCMLEQTTGR*RGSKTACFLRVQYT
Trigger: TGTGTACTGGACACGCAGGAAGCATGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp CACATGACAACACTGCACCGGGCCCTGATTTTGACTGTTTCTCTCTaGGGGTTTGTTCTGATGTCTGTTGTCCCTCAGGCAGTGTGCTGG +
Preference number: 1 (lower is better)
Translates to: HMTTLHRALILTVSL*GFVLMSVVPQAVCW
Trigger: CCAGCACACTGCCTGAGGGACAACAGACATCAGAACAAACCCCCAGAGAGAAACAGTCAAAATCAGGGCCCGGTGCAGTGTTGTCATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp CAGCCAGCTGAGACAGTGAATGTGTTTCCTAGAGAAACAAACTTGTaGGTGTTGGGGTTGCAGGGAAGGCCTAAGCCTGCTGCCTGCTTT +
Preference number: 1 (lower is better)
Translates to: QPAETVNVFPRETNL*VLGLQGRPKPAACF
Trigger: AAAGCAGGCAGCAGGCTTAGGCCTTCCCTGCAACCCCAACACCCACAAGTTTGTTTCTCTAGGAAACACATTCACTGTCTCAGCTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp GGGTGGAGATGTTTCCTGGGACAGGCTCACTTTAACATCTCTGGTTaGGGGATTCCAATGCTGAAAAATCCACAGATGGAGGGTATGGAA +
Preference number: 1 (lower is better)
Translates to: GWRCFLGQAHFNISG*GIPMLKNPQMEGME
Trigger: TTCCATACCCTCCATCTGTGGATTTTTCAGCATTGGAATCCCCCAACCAGAGATGTTAAAGTGAGCCTGTCCCAGGAAACATCTCCACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp TCACTCTCTTGGCTTCCTGTTCTTGGATTCCAAAGACGTCTTGGGTaGAGATGTTTCCTGGGACAGGCTCACTTTAACATCTCTGGTTGG +
Preference number: 1 (lower is better)
Translates to: SLSWLPVLGFQRRLG*RCFLGQAHFNISGW
Trigger: CCAACCAGAGATGTTAAAGTGAGCCTGTCCCAGGAAACATCTCCACCCAAGACGTCTTTGGAATCCAAGAACAGGAAGCCAAGAGAGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp CACGTTTGCTGCTGCCTCTTATATCTTGGGAGATCGAAGTATTTCTaGGTTGCCCAGTGGGCAAAATCCTTACAGGGCATCTCTGAATCT +
Preference number: 1 (lower is better)
Translates to: HVCCCLLYLGRSKYF*VAQWAKSLQGISES
Trigger: AGATTCAGAGATGCCCTGTAAGGATTTTGCCCACTGGGCAACTCAGAAATACTTCGATCTCCCAAGATATAAGAGGCAGCAGCAAACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp CAGGGGTCAGAATCCTTCATACTGTTGACCTTCCCGAAGAATCCCTaGCACTACGGAATTAACACAATTGTGGTTGACCCCATTTCTAGA +
Preference number: 1 (lower is better)
Translates to: QGSESFILLTFPKNP*HYGINTIVVDPISR
Trigger: TCTAGAAATGGGGTCAACCACAATTGTGTTAATTCCGTAGTGTCAGGGATTCTTCGGGAAGGTCAACAGTATGAAGGATTCTGACCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp GATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTaGCCTTCCCGAAGAATCCCTGACACTACGGAATTAACACAATTG +
Preference number: 1 (lower is better)
Translates to: DHINGRHRGQNPSYC*PSRRIPDTTELTQL
Trigger: CAATTGTGTTAATTCCGTAGTGTCAGGGATTCTTCGGGAAGGTCAACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp GGTTATCTACATGACAGTCTTCCAACAATAACTGTCTTTGGCTGCTaGGATCTGGAAAGCCCTAACCATTACCCACATTCAACACTCAGC +
Preference number: 1 (lower is better)
Translates to: GYLHDSLPTITVFGC*DLESPNHYPHSTLS
Trigger: GCTGAGTGTTGAATGTGGGTAATGGTTAGGGCTTTCCAGATCTCAGCAGCCAAAGACAGTTATTGTTGGAAGACTGTCATGTAGATAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 90 bp AAATGGTGTTTGACGGTTGAATGGCCTCTACATTTTGTCAGTAGGTaGTTATACAGAAGGAAAAACCTCAACCTCCGTCTCTTCCTCCAA +
Preference number: 1 (lower is better)
Translates to: KWCLTVEWPLHFVSR*LYRRKNLNLRLFLQ
Trigger: TTGGAGGAAGAGACGGAGGTTGAGGTTTTTCCTTCTGTATAAGCACCTACTGACAAAATGTAGAGGCCATTCAACCGTCAAACACCATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp CAATGCAGTAATTTACACATCCGTCTCCTCTGCGATATAACCAAATaGTGTTTGACGGTTGAATGGCCTCTACATTTTGTCAGTAGGTGC +
Preference number: 1 (lower is better)
Translates to: QCSNLHIRLLCDITK*CLTVEWPLHFVSRC
Trigger: GCACCTACTGACAAAATGTAGAGGCCATTCAACCGTCAAACACCATTTGGTTATATCGCAGAGGAGACGGATGTGTAAATTACTGCATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp ATCCGTCTCCTCTGCGATATAACCAAATGGTGTTTGACGGTTGAATaGCCTCTACATTTTGTCAGTAGGTGCTTATACAGAAGGAAAAAC +
Preference number: 1 (lower is better)
Translates to: IRLLCDITKWCLTVE*PLHFVSRCLYRRKN
Trigger: GTTTTTCCTTCTGTATAAGCACCTACTGACAAAATGTAGAGGCCATTCAACCGTCAAACACCATTTGGTTATATCGCAGAGGAGACGGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 90 bp CCATCTTCCACTAAGATAATGTTCTTGGTTGTAAGAGAGAGACCCTaGACAGTTGATCACATTTGGACTAATAACCCTACAATTTTCAGG +
Preference number: 1 (lower is better)
Translates to: PSSTKIMFLVVRERP*TVDHIWTNNPTIFR
Trigger: CCTGAAAATTGTAGGGTTATTAGTCCAAATGTGATCAACTGTTCAGGGTCTCTCTCTTACAACCAAGAACATTATCTTAGTGGAAGATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 90 bp TATTCTTCCAGGAAGAATATCAACAAAAGTCTACAATCACAGGAATaGATACTCCTAAAGTTAAGCAGAGGTGACAAAGACACAGTCGTT +
Preference number: 1 (lower is better)
Translates to: YSSRKNINKSLQSQE*ILLKLSRGDKDTVV
Trigger: AACGACTGTGTCTTTGTCACCTCTGCTTAACTTTAGGAGTATCCATTCCTGTGATTGTAGACTTTTGTTGATATTCTTCCTGGAAGAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCCCCCAGGGACCTCCTaGGTGGCTGCGGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRPPGTS*VAAAVP
Trigger: TGGAACTGCCGCAGCCACGCAGGAGGTCCCTGGGGG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTGCCAAGAGACGGGCTaGCAGCCCACGGCCTGCAGC +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRCQETG*QPTACS
Trigger: GCTGCAGGCCGTGGGCTGGCAGCCCGTCTCTTGGCA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTTGGAGGGCGGCCCCTaGCAGCACTCCAGTGACTTC +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRLEGGP*QHSSDF
Trigger: GAAGTCACTGGAGTGCTGCCAGGGGCCGCCCTCCAA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGCACGTGCTGGTGCCTaGAGGGCACGGCTGTGTTGG +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGARAGA*RARLCW
Trigger: CCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp ACGTGCTGGTGCCTGCAGGGCACGGCTGTGTTGGTCTCACGAAGTTaGTGCATGCTGGAGCAAACGACAGGTCGTTGCAGAGGCAGCAAG +
Preference number: 2 (lower is better)
Translates to: TCWCLQGTAVLVSRS*CMLEQTTGRCRGSK
Trigger: CTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCCTCTGAAAAGCACGTaGTGGTGCCTGCAGGGCACG +
Preference number: 2 (lower is better)
Translates to: ALLPRLERPMPQWLEESPPLKST*WCLQGT
Trigger: CGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGTGGTCATAGCTCCATaGGTCCTGCGGGGATTCGGA +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRVVIAP*VLRGFG
Trigger: TCCGAATCCCCGCAGGACCCATGGAGCTATGACCAC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp CAGCCTCTGAAAAGCACGTGCTGGTGCCTGCAGGGCACGGCTGTGTaGGTCTCACGAAGTTTGTGCATGCTGGAGCAAACGACAGGTCGT +
Preference number: 2 (lower is better)
Translates to: QPLKSTCWCLQGTAV*VSRSLCMLEQTTGR
Trigger: ACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGAAATGGTTCTTTTCTaGCCGGGCCCGTTCCCTACC +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSREMVLF*PGPFPT
Trigger: GGTAGGGAACGGGCCCGGCCAGAAAAGAACCATTTC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACAGGGACCTCCTGCGTaGCTGCGGCAGTTCCACAGC +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAQGPPA*LRQFHS
Trigger: GCTGTGGAACTGCCGCAGCCACGCAGGAGGTCCCTG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACGTGGGGGTCTGTCCTaGTGCTGCTCCATTCTGGGC +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLARGGLS*CCSILG
Trigger: GCCCAGAATGGAGCAGCAGCAGGACAGACCCCCACG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTAGGGCACGGCTGTGTTaGTCTCACGAAGTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRRARLC*SHEVCA
Trigger: TGCACAAACTTCGTGAGACCAACACAGCCGTGCCCT...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp AGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTaGACGGTGGCACCCCTTCCTCTCCCTCCTACTGCAGGCATATTT +
Preference number: 2 (lower is better)
Translates to: RQKLPSAPTTSDGKP*TVAPLPLPPTAGIF
Trigger: AAATATGCCTGCAGTAGGAGGGAGAGGAAGGGGTGCCACCGTCAACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAAAGGTCAGCCCAGGTaGTGCGGCAATGCCACGTGT +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPKGQPR*CGNATC
Trigger: ACACGTGGCATTGCCGCAGCACCTGGGCTGACCTTT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCCCTTCTACTCAGGGTTaGCAGGACCACCTGGGCCTC +
Preference number: 2 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTPSTQG*QDHLGL
Trigger: GAGGCCCAGGTGGTCCTGGCAACCCTGAGTAGAAGG...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCATCTGGGCAGGGGGACTaGCCCTTTTGTCTCCTAGGC +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLASGQGD*PFCLLG
Trigger: GCCTAGGAGACAAAAGGGCCAGTCCCCCTGCCCAGA...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCCTCAGGCAGTGTGCTaGGCACCCCTGTCGGGGCAT +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCPQAVC*APLSGH
Trigger: ATGCCCCGACAGGGGTGCCCAGCACACTGCCTGAGG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp CGTGTGTACCAACGTACTAGGCAGACTGGAATCAGACACTTCCTGTaGTCCCCAAGAGGAAGAGTGGCGGAGGAACCAGGACGAAAGGTG +
Preference number: 2 (lower is better)
Translates to: RVYQRTRQTGIRHFL*SPRGRVAEEPGRKV
Trigger: CACCTTTCGTCCTGGTTCCTCCGCCACTCTTCCTCTTGGGGACAACAGGAAGTGTCTGATTCCAGTCTGCCTAGTACGTTGGTACACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp GTTGGTCTCACGAAGTTTGTGCATGCTGGAGCAAACGACAGGTCGTaGCAGAGGCAGCAAGACAGCATGCTTCCTGCGTGTCCAGTACAC +
Preference number: 2 (lower is better)
Translates to: VGLTKFVHAGANDRS*QRQQDSMLPACPVH
Trigger: GTGTACTGGACACGCAGGAAGCATGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAGGCATCCGGGTTTCCTaGTTCTACAGCTCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAGIRVS*FYSSRP
Trigger: AGGCCTGGAGCTGTAGAATCAGGAAACCCGGATGCC...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAAAGTCCGCAGCCTCTaGAAAGCACGTGCTGGTGCC +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAKVRSL*KARAGA
Trigger: GGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCACGAAGTTTGTGCATaGTGGAGCAAACGACAGGTC +
Preference number: 2 (lower is better)
Translates to: ALLPRLERPMPQWLEESPHEVCA*WSKRQV
Trigger: GACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGAAGTTTGTGCATGCTaGAGCAAACGACAGGTCGTT +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSREVCAC*SKRQVV
Trigger: AACGACCTGTCGTTTGCTCCAGCATGCACAAACTTC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATCTGAGGACCTTGCATaGGGGTGTCTCACCAAAGCA +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGSEDLA*GCLTKA
Trigger: TGCTTTGGTGAGACACCCCCATGCAAGGTCCTCAGA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGACAGTGGCCCTGCATaGACCACACGAGGCCAGTGG +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCDSGPA*TTRGQW
Trigger: CCACTGGCCTCGTGTGGTCCATGCAGGGCCACTGTC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACTGGGGTACACTGGATaGTCTGGCTCTGCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLALGYTG*SGSAQR
Trigger: TCTCTGGGCAGAGCCAGACCATCCAGTGTACCCCAG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGAACCTACTGGCCTCTaGGGTACACTGGATGGTCTG +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPEPTGL*GTLDGL
Trigger: CAGACCATCCAGTGTACCCCAGAGGCCAGTAGGTTC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GGAGTGCAGCTGCGTCAAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTAGGAAAGGGATCCCATaGAGTCATTCCTTGTTGTTC +
Preference number: 2 (lower is better)
Translates to: GVQLRQERGFVKQGQDSLRKGIP*SHSLLF
Trigger: GAACAACAAGGAATGACTTCATGGGATCCCTTTCCT...AAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTTGACGCAGCTGCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR TCA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGAGGCCCAACCAGAGCTaGAGTATTCACATAACACAG +
Preference number: 2 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTRPNQS*SIHITQ
Trigger: CTGTGTTATGTGAATACTTCAGCTCTGGTTGGGCCT...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR TCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGCCTGTCATTCAACGTaGACTAGAAATGGGAACCAA +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRACHST*TRNGNQ
Trigger: TTGGTTCCCATTTCTAGTTCACGTTGAATGACAGGC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGGCAAAACACTCTCTTaGGGGCCAGCAGACAGAAAC +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPGKTLS*GPADRN
Trigger: GTTTCTGTCTGCTGGCCCTCAAGAGAGTGTTTTGCC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACAGGTGCTGCGGCAATaGCACGTGTGTACCAACGTA +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAQVLRQ*HVCTNV
Trigger: TACGTTGGTACACACGTGGCATTGCCGCAGCACCTG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGAGACAGCATGCTTCCTaGGTGTCCAGTACACACAGC +
Preference number: 2 (lower is better)
Translates to: NATMAGRKSAASEKHVLVRQHAS*VSSTHS
Trigger: GCTGTGTGTACTGGACACGCAGGAAGCATGCTGTCT...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCAAACGACAGGTCGTTaGAGAGGCAGCAAGACAGCA +
Preference number: 2 (lower is better)
Translates to: NATMAGRKSAASEKHVLVQTTGR*RGSKTA
Trigger: TGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGACCTTCAATTGAAATaGCAAGAGACGGGCTGCCAG +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGDLQLK*QETGCQ
Trigger: CTGGCAGCCCGTCTCTTGGCATTTCAATTGAAGGTC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGACAAAGACGTCTTGGGTaGAGATGTTTCCTGGGACAG +
Preference number: 2 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRQRRLG*RCFLGQ
Trigger: CTGTCCCAGGAAACATCTCCACCCAAGACGTCTTTG...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCTGCTGGACCATGGTTaGGTTAGGATTTGTCAATGT +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRLLDHG*VRICQC
Trigger: ACATTGACAAATCCTAACCCAACCATGGTCCAGCAG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGACCTCCACAGGCCCTaGCAATCAGGCAGTGCTCAG +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCDLHRP*QSGSAQ
Trigger: CTGAGCACTGCCTGATTGCCAGGGCCTGTGGAGGTC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTAGAAAGCCTAATACGTaGCATCAGAAAGGGCAGACA +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRRKPNT*HQKGQT
Trigger: TGTCTGCCCTTTCTGATGCCACGTATTAGGCTTTCT...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGCCTCTGGGGTACACTaGATGGTCTGGCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCASGVH*MVWLCP
Trigger: TGGGCAGAGCCAGACCATCCAGTGTACCCCAGAGGC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp GTCTGCATCCTCCTTCCAGGAAGTCACCACACTCGCCTAAGGACTTaGGCTCCGAGAGGTGCTCAACAATCATTTGTTGGGCTGCATGAA +
Preference number: 2 (lower is better)
Translates to: VCILLPGSHHTRLRT*APRGAQQSFVGLHE
Trigger: TTCATGCAGCCCAACAAATGATTGTTGAGCACCTCTCGGAGCCAAAGTCCTTAGGCGAGTGTGGTGACTTCCTGGAAGGAGGATGCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp TGTTTTCTGAGGAGGAACAGACTGTGTCCCTGGCAAAACACTCTCTaGAGGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCC +
Preference number: 2 (lower is better)
Translates to: CFLRRNRLCPWQNTL*RASRQKLPSAPTTS
Trigger: GGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCCTCAAGAGAGTGTTTTGCCAGGGACACAGTCTGTTCCTCCTCAGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp CACTCCTTGTCAAATTGGTGTGTGGCCACTAACAACAGAGCACCCTaGTCCTTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACT +
Preference number: 2 (lower is better)
Translates to: HSLSNWCVATNNRAP*SFLVTVMPTAVPVT
Trigger: AGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAAGGACAAGGGTGCTCTGTTGTTAGTGGCCACACACCAATTTGACAAGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAAGGAGGGTACCAGATaGCAGATTCACCCAACACTC +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPKEGTR*QIHPTL
Trigger: GAGTGTTGGGTGAATCTGTCATCTGGTACCCTCCTT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATGGTTGTGTGTTCTGTaGACTTCAGGCAAACAGCCA +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGWLCVL*TSGKQP
Trigger: TGGCTGTTTGCCTGAAGTTCACAGAACACACAACCA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAAGAGTAACAGCCAGCTaGGACAGTGAATGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGRVTAS*DSECVS
Trigger: GGAAACACATTCACTGTCTCAGCTGGCTGTTACTCT...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCTTTGCCATATGGTCTaGGAGAGTAACAGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPLCHMV*ESNSQL
Trigger: CAGCTGGCTGTTACTCTCTCAGACCATATGGCAAAG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GAGCCTTCAGGAGGTATTCCAGAAGGCATTGTTATCAGGGGTGATGACAGCTCCGTGTATTACTGCCCCTaGAGACCTTCCAGTGGGACA +
Preference number: 2 (lower is better)
Translates to: EPSGGIPEGIVIRGDDSSVYYCP*RPSSGT
Trigger: TGTCCCACTGGAAGGTCTTCAGGGGCAGTAATACAC...GGAGCTGTCATCACCCCTGATAACAATGCCTTCTGGAATACCTCCTGAAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
3UTR-3UTR GCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGTCTCACGAAGTTTGTaGATGCTGGAGCAAACGACA +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGVSRSL*MLEQTT
Trigger: TGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGAC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAGTCCCTCAGGCAGTGTaGTGGGCACCCCTGTCGGGG +
Preference number: 2 (lower is better)
Translates to: HLISHNTHEGASTIEFYEVPQAV*WAPLSG
Trigger: CCCCGACAGGGGTGCCCAGCACACTGCCTGAGGGAC...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGACTGCGGATTTAGTGTaGAGCGGATGGTTTTGGTTT +
Preference number: 2 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTTADLV*SGWFWF
Trigger: AAACCAAAACCATCCGCTCCACACTAAATCCGCAGT...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CCA 90 bp AAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTTCTACCATGGTGCACACTTGTACCATCCACTaGCCGGCATCTTCATCAGCT +
Preference number: 2 (lower is better)
Translates to: KNGGLSSRAKTRFSTMVHTCTIH*PASSSA
Trigger: AGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGT...GTGCACCATGGTAGAAAAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGTACACTGGATGGTCTaGCTCTGCCCAGAGAACTAT +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPVHWMV*LCPENY
Trigger: ATAGTTCTCTGGGCAGAGCCAGACCATCCAGTGTAC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp ACGATTGTCTGGTGTGCCCAGCAGGGGAAACAGGCACTCCTACCCTaGTCGGGTTATAAAGAAACAGGAAATGGTGTGATGTGCACACAC +
Preference number: 2 (lower is better)
Translates to: TIVWCAQQGKQALLP*SGYKETGNGVMCTH
Trigger: GTGTGTGCACATCACACCATTTCCTGTTTCTTTATAACCCGACAAGGGTAGGAGTGCCTGTTTCCCCTGCTGGGCACACCAGACAATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GGAGTGCAGCTGCGTCAAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTCGTCGGTCTTTGTCTaGAGGTTTCAATTTGAATGT +
Preference number: 2 (lower is better)
Translates to: GVQLRQERGFVKQGQDSLSSVFV*RFQFEC
Trigger: ACATTCAAATTGAAACCTTCAGACAAAGACCGACGA...AAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTTGACGCAGCTGCACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR TCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGGGGGATTCCAATGCTaGAAAATCCACAGATGGAGG +
Preference number: 2 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTGGFQC*KIHRWR
Trigger: CCTCCATCTGTGGATTTTTCAGCATTGGAATCCCCC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAAATGTTTGGGAACAGTaGTTAGGTTTATCCCGGCCT +
Preference number: 2 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRNVWEQ*LGLSRP
Trigger: AGGCCGGGATAAACCTAATCACTGTTCCCAAACATT...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTATCCTTGATCTGAAATaGTTTCACACGCTTGTTCAG +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRILDLK*FHTLVQ
Trigger: CTGAACAAGCGTGTGAAATCATTTCAGATCAAGGAT...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTACCATAGAATTTTATaGACTGATTCTGAGGCGAGC +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRYHRIL*TDSEAS
Trigger: GCTCGCCTCAGAATCAGTTCATAAAATTCTATGGTA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAAACCCAGCACCTGGTaGCCTTCAATTGAAATGCCA +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPKPSTW*PSIEMP
Trigger: TGGCATTTCAATTGAAGGTCACCAGGTGCTGGGTTT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTCTCGATGTCTATGGTaGATAAAAGATGGCAGAAGA +
Preference number: 2 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRSRCLW*IKDGRR
Trigger: TCTTCTGCCATCTTTTATGCACCATAGACATCGAGA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAACAGAAACTTCCATCTaGACCAACCACCTCCGATGG +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLATETSI*TNHLRW
Trigger: CCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTACGATTGTCTGGTGTaGCCAGCAGGGGAAACAGGC +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCYDCLV*PAGETG
Trigger: GCCTGTTTCCCCTGCTGGGCACACCAGACAATCGTA...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GATGACTTTGTTGCCAGCAGGGCCAAGTTTGGCTTTCTCGAATTTCTGCCTGAGCGTCCCCTTCCGGAATaGGTACGTTGTAGTACTCAC +
Preference number: 2 (lower is better)
Translates to: DDFVASRAKFGFLEFLPERPLPE*VRCSTH
Trigger: GTGAGTACTACAACGTACCCATTCCGGAAGGGGACG...CTCAGGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTGGCAACAAAGTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCATTCCAAAGACGTCTTaGGTGGAGATGTTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPIPKTS*VEMFPG
Trigger: CCCAGGAAACATCTCCACCCAAGACGTCTTTGGAAT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCCCCTGCTCACTCTCTTaGCTTCCTGTTCTTGGATTC +
Preference number: 2 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTPCSLS*LPVLGF
Trigger: GAATCCAAGAACAGGAAGCCAAGAGAGTGAGCAGGG...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAGAGAAACAAACTTGTaGGTGTTGGGGTTGCAGGGA +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPRETNL*VLGLQG
Trigger: TCCCTGCAACCCCAACACCCACAAGTTTGTTTCTCT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGACACTCCTTGTCAAATTaGTGTGTGGCCACTAACAAC +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGHSLSN*CVATNN
Trigger: GTTGTTAGTGGCCACACACCAATTTGACAAGGAGTG...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp CCTGCTCACTCTCTTGGCTTCCTGTTCTTGGATTCCAAAGACGTCTaGGGTGGAGATGTTTCCTGGGACAGGCTCACTTTAACATCTCTG +
Preference number: 2 (lower is better)
Translates to: PAHSLGFLFLDSKDV*GGDVSWDRLTLTSL
Trigger: CAGAGATGTTAAAGTGAGCCTGTCCCAGGAAACATCTCCACCCAAGACGTCTTTGGAATCCAAGAACAGGAAGCCAAGAGAGTGAGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp CTCGAATTTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTTGCATCTCGTACTGTaGCATGGAGCTTTTCATCAG +
Preference number: 2 (lower is better)
Translates to: LEFLPEFHVSFLVPFRNGLHLVL*HGAFHQ
Trigger: CTGATGAAAAGCTCCATGTCACAGTACGAGATGCAA...CCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR TCA 90 bp TTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTACGTTGCTTCACATAAGGATCTaGAAGCCCGTTTGGATCCAT +
Preference number: 2 (lower is better)
Translates to: FCLSSMFPSSSPSGMGTLLHIRI*KPVWIH
Trigger: ATGGATCCAAACGGGCTTTCAGATCCTTATGTGAAG...CAACGTACCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR TCA 90 bp CACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAACCACCTTCTTCAGGATTTTaGTTGCATACAGTTCTTCTG +
Preference number: 2 (lower is better)
Translates to: HANTSCTKTSGLALEAQPPSSGF*LHTVLL
Trigger: CAGAAGAACTGTATGCAATCAAAATCCTGAAGAAGG...TGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR TCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGATTAACAAAACATCTTTaGGCTGTTAGGCATCCGGGT +
Preference number: 2 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRLTKHL*AVRHPG
Trigger: ACCCGGATGCCTAACAGCTCAAAGATGTTTTGTTAA...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAACCAGGACGAAAGGTaGCATGAAGAAACTAAGAGG +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPNQDER*HEETKR
Trigger: CCTCTTAGTTTCTTCATGTCACCTTTCGTCCTGGTT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp AACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAAAAGGACTCATTCCACTaGGGATTTAGTGTGGAGCGG +
Preference number: 2 (lower is better)
Translates to: NLYHPLAGIFISSETPKEKDSFH*GFSVER
Trigger: CCGCTCCACACTAAATCCGCAGTGGAATGAGTCCTT...TTCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR GCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCATCTATCTGATACAGTaGCCATGTGCAGGGAGGGAA +
Preference number: 2 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTIYLIQ*PCAGRE
Trigger: TTCCCTCCCTGCACATGGGCACTGTATCAGATAGAT...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGTCTACAGAATTAAACTaGACACTGAGCATGACGTAC +
Preference number: 2 (lower is better)
Translates to: ALLPRLERPMPQWLEESPSTELN*TLSMTY
Trigger: GTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGA...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTATGTCTCCTGCTAAGTaGAACCCAGGTGGGAACTGC +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCMSPAK*NPGGNC
Trigger: GCAGTTCCCACCTGGGTTCCACTTAGCAGGAGACAT...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAAAAATGACTGTCAGATaGTATCACCTTTCCGAGGCT +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGKMTVR*YHLSEA
Trigger: AGCCTCGGAAAGGTGATACCATCTGACAGTCATTTT...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp AACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAAATGACGCATTGCTTGTaGACGTTCATATCGCAGGTG +
Preference number: 2 (lower is better)
Translates to: NLYHPLAGIFISSETPKEMTHCL*TFISQV
Trigger: CACCTGCGATATGAACGTTCACAAGCAATGCGTCAT...TTCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR TCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGATCCCAGAGATTAAAATaGACATATGTACACACTGGC +
Preference number: 2 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRSQRLK*TYVHTG
Trigger: GCCAGTGTGTACATATGTTCATTTTAATCTCTGGGA...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAGGGGGTGGGTGTTGGTaGACAACACTGGTGAGTAGT +
Preference number: 2 (lower is better)
Translates to: SVEADARVSTSIKLLYIVGGGCW*TTLVSS
Trigger: ACTACTCACCAGTGTTGTTCACCAACACCCACCCCC...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAGGTCAGCCCAGGTGCTaGGGCAATGCCACGTGTGTA +
Preference number: 2 (lower is better)
Translates to: HLISHNTHEGASTIEFYEGQPRC*GNATCV
Trigger: TACACACGTGGCATTGCCGCAGCACCTGGGCTGACC...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGACAGCAGGGCCAAGTTTaGCTTTCTCGAATTTCTGCC +
Preference number: 2 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRQQGQV*LSRISA
Trigger: GGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTG...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAACTGAAAAGCACGTGCTaGTGCCTGCAGGGCACGGCT +
Preference number: 2 (lower is better)
Translates to: HLISHNTHEGASTIEFYELKSTC*CLQGTA
Trigger: AGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAG...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTACAGGTAACATTCCCTaGATCTGCTGCATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCTGNIP*ICCISP
Trigger: TGGGCTGATGCAGCAGATCCAGGGAATGTTACCTGT...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp CCTTCCCGAAGAATCCCTGACACTACGGAATTAACACAATTGTGGTaGACCCCATTTCTAGATGATGGCCTTCATCCATGTGTGCGTCAG +
Preference number: 2 (lower is better)
Translates to: PSRRIPDTTELTQLW*TPFLDDGLHPCVRQ
Trigger: CTGACGCACACATGGATGAAGGCCATCATCTAGAAATGGGGTCAACCACAATTGTGTTAATTCCGTAGTGTCAGGGATTCTTCGGGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATCATGGTTATCTACATaGCAGTCTTCCAACAATAAC +
Preference number: 2 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGSWLST*QSSNNN
Trigger: GTTATTGTTGGAAGACTGTCATGTAGATAACCATGA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAAATTGTACCCAAAATaGGGCAACAGTCTGCTTGCT +
Preference number: 2 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAKLYPK*GNSLLA
Trigger: AGCAAGCAGACTGTTGCCCCATTTTGGGTACAATTT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCTTCAACACTCAGCAATaGATAAAGCAGGTTCCACAT +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPFNTQQ*IKQVPH
Trigger: ATGTGGAACCTGCTTTATCCATTGCTGAGTGTTGAA...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTAACAGACTGTGTCCCTaGCAAAACACTCTCTTGAGG +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCNRLCP*QNTLLR
Trigger: CCTCAAGAGAGTGTTTTGCCAGGGACACAGTCTGTT...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp AGGCCAGTGGATGAAAGGAAGGGAAGCACTGCCGGAGCAATAATTTaGACTCCTGTGGTTTCTGATCTGCCTTTTGAATTAGTTCTTGCC +
Preference number: 2 (lower is better)
Translates to: RPVDERKGSTAGAII*TPVVSDLPFELVLA
Trigger: GGCAAGAACTAATTCAAAAGGCAGATCAGAAACCACAGGAGTCAAAATTATTGCTCCGGCAGTGCTTCCCTTCCTTTCATCCACTGGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGCTCTCTACAAGGACTaGCAGCTACTTTCATTCTGT +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCALYKD*QLLSFC
Trigger: ACAGAATGAAAGTAGCTGTCAGTCCTTGTAGAGAGC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGATCTCGTACTGTGACATaGAGCTTTTCATCAGCAACC +
Preference number: 2 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRSRTVT*SFSSAT
Trigger: GGTTGCTGATGAAAAGCTCCATGTCACAGTACGAGA...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTTTAACATCTCTGGTTaGGGGATTCCAATGCTGAAA +
Preference number: 2 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTFNISG*GIPMLK
Trigger: TTTCAGCATTGGAATCCCCCAACCAGAGATGTTAAA...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp TTTGCTGCTGCCTCTTATATCTTGGGAGATCGAAGTATTTCTGAGTaGCCCAGTGGGCAAAATCCTTACAGGGCATCTCTGAATCTTCAC +
Preference number: 2 (lower is better)
Translates to: FAAASYILGDRSISE*PSGQNPYRASLNLH
Trigger: GTGAAGATTCAGAGATGCCCTGTAAGGATTTTGCCCACTGGGCAACTCAGAAATACTTCGATCTCCCAAGATATAAGAGGCAGCAGCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp ATGAAACAGACGTCAATAGGCACGTTTGCTGCTGCCTCTTATATCTaGGGAGATCGAAGTATTTCTGAGTTGCCCAGTGGGCAAAATCCT +
Preference number: 2 (lower is better)
Translates to: MKQTSIGTFAAASYI*GDRSISELPSGQNP
Trigger: AGGATTTTGCCCACTGGGCAACTCAGAAATACTTCGATCTCCCAAGATATAAGAGGCAGCAGCAAACGTGCCTATTGACGTCTGTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCACAGATGGAGGGTATaGAAAGTATATCAAATTGTA +
Preference number: 2 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPHRWRV*KVYQIV
Trigger: TACAATTTGATATACTTTCCATACCCTCCATCTGTG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAACTGTCTTTGGCTGCTaGGATCTGGAAAGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: HLISHNTHEGASTIEFYETVFGC*DLESPN
Trigger: GTTAGGGCTTTCCAGATCTCAGCAGCCAAAGACAGT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR TCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTAAACAGGAAATGGTGTaGTGTGCACACACAAGAAAT +
Preference number: 2 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCKQEMV*CAHTRN
Trigger: ATTTCTTGTGTGTGCACATCACACCATTTCCTGTTT...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAGGGCAACAGTCTGCTTaGTTTCTAGGAAGGGTTAAC +
Preference number: 2 (lower is better)
Translates to: HLISHNTHEGASTIEFYEGQQSA*FLGRVN
Trigger: GTTAACCCTTCCTAGAAAGCAAGCAGACTGTTGCCC...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAAATGGGGCAACAGTCTaGTTGCTTTCTAGGAAGGGT +
Preference number: 2 (lower is better)
Translates to: HLISHNTHEGASTIEFYENGATV*LLSRKG
Trigger: ACCCTTCCTAGAAAGCAAGCAGACTGTTGCCCCATT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTTACTCACCTTCTTCTTaGTTAAGCAACTTGTACCAT +
Preference number: 2 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTYSPSS*LSNLYH
Trigger: ATGGTACAAGTTGCTTAACCAAGAAGAAGGTGAGTA...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAATTGGCTGCTGAGATCTaGAAAGCCCTAACCATTACC +
Preference number: 2 (lower is better)
Translates to: HLISHNTHEGASTIEFYELAAEI*KALTIT
Trigger: GGTAATGGTTAGGGCTTTCCAGATCTCAGCAGCCAA...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAATTGGCTTCCTGTTCTTaGATTCCAAAGACGTCTTGG +
Preference number: 2 (lower is better)
Translates to: HLISHNTHEGASTIEFYELASCS*IPKTSW
Trigger: CCAAGACGTCTTTGGAATCCAAGAACAGGAAGCCAA...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 90 bp AGTAATTTACACATCCGTCTCCTCTGCGATATAACCAAATGGTGTTaGACGGTTGAATGGCCTCTACATTTTGTCAGTAGGTGCTTATAC +
Preference number: 2 (lower is better)
Translates to: SNLHIRLLCDITKWC*TVEWPLHFVSRCLY
Trigger: GTATAAGCACCTACTGACAAAATGTAGAGGCCATTCAACCGTCAAACACCATTTGGTTATATCGCAGAGGAGACGGATGTGTAAATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp GGCAAGGACTTCCCAAAGCATCCCCCAGGGACCTCCTaGGTGGCTGCGGCAGTTCCACAGCGCACCCCTCGC +
Preference number: 3 (lower is better)
Translates to: GKDFPKHPPGTS*VAAAVPQRTPR
Trigger: GCGAGGGGTGCGCTGTGGAACTGCCGCAGCCACGCAGGAGGTCCCTGGGGGATGCTTTGGGAAGTCCTTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp ACCTCATGTGTTCCTCCGTGGGATCTTCCTCCTCTCTaGGGGGCCTCGTGGGGGTCTGTCCTGCTGCTGCTC +
Preference number: 3 (lower is better)
Translates to: TSCVPPWDLPPL*GASWGSVLLLL
Trigger: GAGCAGCAGCAGGACAGACCCCCACGAGGCCCCCCAGAGAGGAGGAAGATCCCACGGAGGAACACATGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp TTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTaGCGGTGGCACCCCTTCCTCTCCCTCCTACTGCAG +
Preference number: 3 (lower is better)
Translates to: FHLHQPPPMGSR*RWHPFLSLLLQ
Trigger: CTGCAGTAGGAGGGAGAGGAAGGGGTGCCACCGTCAACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp GGGTCTGGGCACAGAGCCAAGGAAGCATCCTCCTCCTaGCAAAAGATGGCCACAGAGCCTCACGGAGCAAGG +
Preference number: 3 (lower is better)
Translates to: GSGHRAKEASSS*QKMATEPHGAR
Trigger: CCTTGCTCCGTGAGGCTCTGTGGCCATCTTTTGGCAGGAGGAGGATGCTTCCTTGGCTCTGTGCCCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp CAATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTaGAAAGCACGTGCTGGTGCCTGCAGGGCACGGCTG +
Preference number: 3 (lower is better)
Translates to: QCHNGWKKVRSL*KARAGACRARL
Trigger: CAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp TGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTaGTGGTGCCTGCAGGGCACGGCTGTGTTGGTCTCA +
Preference number: 3 (lower is better)
Translates to: WLEESPQPLKST*WCLQGTAVLVS
Trigger: TGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp CTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTaGTGCCTGCAGGGCACGGCTGTGTTGGTCTCACGA +
Preference number: 3 (lower is better)
Translates to: LEESPQPLKSTC*CLQGTAVLVSR
Trigger: TCGTGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp CAGACAGAAACTTCCATCTGCACCAACCACCTCCGATaGGAAGCCGTTGACGGTGGCACCCCTTCCTCTCCC +
Preference number: 3 (lower is better)
Translates to: QTETSICTNHLR*EAVDGGTPSSP
Trigger: GGGAGAGGAAGGGGTGCCACCGTCAACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp CAGGTCGTTGCAGAGGCAGCAAGACAGCATGCTTCCTaGGTGTCCAGTACACACAGCAAGAGGGGAGTCTCC +
Preference number: 3 (lower is better)
Translates to: QVVAEAARQHAS*VSSTHSKRGVS
Trigger: GGAGACTCCCCTCTTGCTGTGTGTACTGGACACGCAGGAAGCATGCTGTCTTGCTGCCTCTGCAACGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp CTGCAGGGCACGGCTGTGTTGGTCTCACGAAGTTTGTaGATGCTGGAGCAAACGACAGGTCGTTGCAGAGGC +
Preference number: 3 (lower is better)
Translates to: LQGTAVLVSRSL*MLEQTTGRCRG
Trigger: GCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp GAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTaGCTGCAGGGCACGGCTGTGTTGGTCTCACGAAGT +
Preference number: 3 (lower is better)
Translates to: EESPQPLKSTCW*LQGTAVLVSRS
Trigger: ACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp TTTGTGGTAGAACCCGGCTACTCTGAGGACCTTGCATaGGGGTGTCTCACCAAAGCAGCGCGCTCCTCCCAA +
Preference number: 3 (lower is better)
Translates to: FVVEPGYSEDLA*GCLTKAARSSQ
Trigger: TTGGGAGGAGCGCGCTGCTTTGGTGAGACACCCCCATGCAAGGTCCTCAGAGTAGCCGGGTTCTACCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp CCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTaGTCAGGACACGAACCCAGATCATGCACTGACCTG +
Preference number: 3 (lower is better)
Translates to: PVPFPSDQRRST*SGHEPRSCTDL
Trigger: CAGGTCAGTGCATGATCTGGGTTCGTGTCCTGACCAGGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp GCCAGAGAGGAAAATGGGCAGGAACCTACTGGCCTCTaGGGTACACTGGATGGTCTGGCTCTGCCCAGAGAA +
Preference number: 3 (lower is better)
Translates to: AREENGQEPTGL*GTLDGLALPRE
Trigger: TTCTCTGGGCAGAGCCAGACCATCCAGTGTACCCCAGAGGCCAGTAGGTTCCTGCCCATTTTCCTCTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAGTGTGGGGGTGGGTGTaGGTGAACAACACTGGTGAG +
Preference number: 3 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRVWGWV*VNNTGE
Trigger: CTCACCAGTGTTGTTCACCAACACCCACCCCCACAC...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp AATCCTTACAGGGCATCTCTGAATCTTCACCCAAGGTaGGAGACCTGGGGACCAGGCGGGTCTGGGCACAGA +
Preference number: 3 (lower is better)
Translates to: NPYRASLNLHPR*ETWGPGGSGHR
Trigger: TCTGTGCCCAGACCCGCCTGGTCCCCAGGTCTCTCACCTTGGGTGAAGATTCAGAGATGCCCTGTAAGGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp TTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTaGACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAA +
Preference number: 3 (lower is better)
Translates to: FRLGQGSHANTS*TKTSGLALEAQ
Trigger: TTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR GCA 72 bp ACGCACACACAAAGGTCAGCCCAGGTGCTGCGGCAATaGCACGTGTGTACCAACGTACTAGGCAGACTGGAA +
Preference number: 3 (lower is better)
Translates to: THTQRSAQVLRQ*HVCTNVLGRLE
Trigger: TTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACCTGGGCTGACCTTTGTGTGTGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp CAAACGACAGGTCGTTGCAGAGGCAGCAAGACAGCATaGTTCCTGCGTGTCCAGTACACACAGCAAGAGGGG +
Preference number: 3 (lower is better)
Translates to: QTTGRCRGSKTA*FLRVQYTQQEG
Trigger: CCCCTCTTGCTGTGTGTACTGGACACGCAGGAAGCATGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp AGGGCACGGCTGTGTTGGTCTCACGAAGTTTGTGCATaGTGGAGCAAACGACAGGTCGTTGCAGAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: RARLCWSHEVCA*WSKRQVVAEAA
Trigger: TGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAACACAGCCGTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp CACTCTCTTGAGGGCCAGCAGACAGAAACTTCCATCTaGACCAACCACCTCCGATGGGAAGCCGTTGACGGT +
Preference number: 3 (lower is better)
Translates to: HSLEGQQTETSI*TNHLRWEAVDG
Trigger: ACCGTCAACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCCTCAAGAGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp ATCCACTTTGAAGGGGGCGTTTCTCCCTCTTTCGCCTaGGTCAGGGAAGTCACGCCAACACCAGCTGCACTA +
Preference number: 3 (lower is better)
Translates to: IHFEGGVSPSFA*VREVTPTPAAL
Trigger: TAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGAGAAACGCCCCCTTCAAAGTGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR CCA 72 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATaGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACG +
Preference number: 3 (lower is better)
Translates to: ALLPRLERPMPQ*LEESPQPLKST
Trigger: CGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp GGGTGTCTCACCAAAGCAGCGCGCTCCTCCCAAGACTaGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTC +
Preference number: 3 (lower is better)
Translates to: GCLTKAARSSQD*KGQCHNGWKKV
Trigger: GACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGCGCTGCTTTGGTGAGACACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp CACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAACCACCAGCAGGGCCAAGTTaGGCTTTCTCGAATTTCTGC +
Preference number: 3 (lower is better)
Translates to: HANTSCTKTSGLALEAQPPAGPS*AFSNFC
Trigger: GCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTGG...TGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CAA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGGGACTGATGACTTTGTaGCCAGCAGGGCCAAGTTTG +
Preference number: 3 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTGLMTL*PAGPSL
Trigger: CAAACTTGGCCCTGCTGGCAACAAAGTCATCAGTCC...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CAA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCAGGGCACGGCTGTGTaGGTCTCACGAAGTTTGTGC +
Preference number: 3 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPQGTAV*VSRSLC
Trigger: GCACAAACTTCGTGAGACCAACACAGCCGTGCCCTG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp GCTGCCTGCTTTAAACAGGCAGGCTGTTTGGGGTGCTaGACAAGGGTCCCTAACCTCATGTGTTCCTCCGTG +
Preference number: 3 (lower is better)
Translates to: AACFKQAGCLGC*TRVPNLMCSSV
Trigger: CACGGAGGAACACATGAGGTTAGGGACCCTTGTTCAGCACCCCAAACAGCCTGCCTGTTTAAAGCAGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp ACTTCCTTTCAAACCCAGCACCTGGTGACCTTCAATTaGAATGCCAAGAGACGGGCTGCCAGCCCACGGCCT +
Preference number: 3 (lower is better)
Translates to: TSFQTQHLVTFN*NAKRRAASPRP
Trigger: AGGCCGTGGGCTGGCAGCCCGTCTCTTGGCATTTCAATTGAAGGTCACCAGGTGCTGGGTTTGAAAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp CGAAGTTTGTGCATGCTGGAGCAAACGACAGGTCGTTaGAGAGGCAGCAAGACAGCATGCTTCCTGCGTGTC +
Preference number: 3 (lower is better)
Translates to: RSLCMLEQTTGR*RGSKTACFLRV
Trigger: GACACGCAGGAAGCATGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp GCACGGCTGTGTTGGTCTCACGAAGTTTGTGCATGCTaGAGCAAACGACAGGTCGTTGCAGAGGCAGCAAGA +
Preference number: 3 (lower is better)
Translates to: ARLCWSHEVCAC*SKRQVVAEAAR
Trigger: TCTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAACACAGCCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp GGTGCTCAACAATCATTTGTTGGGCTGCATGAACCTTaGTCTTTCCGGCCAGGCTTCCAGAGCTCTTGGCCC +
Preference number: 3 (lower is better)
Translates to: GAQQSFVGLHEP*SFRPGFQSSWP
Trigger: GGGCCAAGAGCTCTGGAAGCCTGGCCGGAAAGACCAAGGTTCATGCAGCCCAACAAATGATTGTTGAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAGCAAACGACAGGTCGTaGCAGAGGCAGCAAGACAGC +
Preference number: 3 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAANDRS*QRQQDS
Trigger: GCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGC...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGCTACTCTGAGGACCTaGCATGGGGGTGTCTCACCA +
Preference number: 3 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTATLRT*HGGVSP
Trigger: TGGTGAGACACCCCCATGCAAGGTCCTCAGAGTAGC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp ACAGTGGCCCTGCATGGACCACACGAGGCCAGTGGATaGAAGGAAGGGAAGCACTGCCGGAGCAATAATTTT +
Preference number: 3 (lower is better)
Translates to: TVALHGPHEASG*KEGKHCRSNNF
Trigger: AAAATTATTGCTCCGGCAGTGCTTCCCTTCCTTTCATCCACTGGCCTCGTGTGGTCCATGCAGGGCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp AGTTGCCCAGTGGGCAAAATCCTTACAGGGCATCTCTaGATCTTCACCCAAGGTGAGAGACCTGGGGACCAG +
Preference number: 3 (lower is better)
Translates to: SCPVGKILTGHL*IFTQGERPGDQ
Trigger: CTGGTCCCCAGGTCTCTCACCTTGGGTGAAGATTCAGAGATGCCCTGTAAGGATTTTGCCCACTGGGCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp AGCACCCTTGTCCTTCCTGGTGACTGTCATGCCTACTaGTGTCCCGGTAACTCTCATGATCACACCCTTTGG +
Preference number: 3 (lower is better)
Translates to: STLVLPGDCHAY*CPGNSHDHTLW
Trigger: CCAAAGGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAAGGACAAGGGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp TCTGTCCTGCTGCTGCTCCATTCTGGGCAGGGGGACTaGCCCTTTTGTCTCCTAGGCTCTTTCTATAAACCA +
Preference number: 3 (lower is better)
Translates to: SVLLLLHSGQGD*PFCLLGSFYKP
Trigger: TGGTTTATAGAAAGAGCCTAGGAGACAAAAGGGCCAGTCCCCCTGCCCAGAATGGAGCAGCAGCAGGACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp CACCTTCCAAGGGAAGATAATGCAGAGCCATTTGAATaGCCTGGTGTGGTCATAGCTCCATGGGTCCTGCGG +
Preference number: 3 (lower is better)
Translates to: HLPREDNAEPFE*PGVVIAPWVLR
Trigger: CCGCAGGACCCATGGAGCTATGACCACACCAGGCCATTCAAATGGCTCTGCATTATCTTCCCTTGGAAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp GGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTaGACTCCATACCCTAGGAGCATGGGAAAATCTGGC +
Preference number: 3 (lower is better)
Translates to: GQVPPELAVIPT*TPYPRSMGKSG
Trigger: GCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTCCTTCTACTCAGGGTaGCCAGGACCACCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCSFYSG*PGPPGP
Trigger: AGGCCCAGGTGGTCCTGGCAACCCTGAGTAGAAGGA...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATGGCAAAACACTCTCTaGAGGGCCAGCAGACAGAAA +
Preference number: 3 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGWQNTL*RASRQK
Trigger: TTTCTGTCTGCTGGCCCTCAAGAGAGTGTTTTGCCA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp CAGCAGGGCCAAGTTTGGCTTTCTCGAATTTCTGCCTaGGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAA +
Preference number: 3 (lower is better)
Translates to: QQGQVWLSRISA*VPCFLPRPLPE
Trigger: TTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR TCA 72 bp CATTCTGTTTCTGTTTGTGGTAGAACCCGGCTACTCTaGGGACCTTGCATGGGGGTGTCTCACCAAAGCAGC +
Preference number: 3 (lower is better)
Translates to: HSVSVCGRTRLL*GPCMGVSHQSS
Trigger: GCTGCTTTGGTGAGACACCCCCATGCAAGGTCCTCAGAGTAGCCGGGTTCTACCACAAACAGAAACAGAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp GGAGGAACAGACTGTGTCCCTGGCAAAACACTCTCTTaGGGGCCAGCAGACAGAAACTTCCATCTGCACCAA +
Preference number: 3 (lower is better)
Translates to: GGTDCVPGKTLS*GPADRNFHLHQ
Trigger: TTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCCTCAAGAGAGTGTTTTGCCAGGGACACAGTCTGTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp AAAAACTCGCAGAGCATCAGTCGGCCAAGTTCCACCTaGACTTGCAGTCATTCCCACGTGGACTCCATACCC +
Preference number: 3 (lower is better)
Translates to: KNSQSISRPSST*TCSHSHVDSIP
Trigger: GGGTATGGAGTCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGCGAGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp ACACTGCACCGGGCCCTGATTTTGACTGTTTCTCTCTaGGGGTTTGTTCTGATGTCTGTTGTCCCTCAGGCA +
Preference number: 3 (lower is better)
Translates to: TLHRALILTVSL*GFVLMSVVPQA
Trigger: TGCCTGAGGGACAACAGACATCAGAACAAACCCCCAGAGAGAAACAGTCAAAATCAGGGCCCGGTGCAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp AGGGAAGTCACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGACTCGGTCAAGGTTGTaGGAAGGTTGTTTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: REVTPTPAALKRQVLLSRTRSRL*EGCFLS
Trigger: AGACAGGAAACAACCTTCCAACAACCTTGACCGAGT...CCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CAA 90 bp AGGGAAGTCACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGTTCACTCGGTCAAGGTaGTTGGAAGGTTGTTTCCTG +
Preference number: 3 (lower is better)
Translates to: REVTPTPAALKRQVLLSRFTRSR*LEGCFL
Trigger: CAGGAAACAACCTTCCAACAACCTTGACCGAGTGAA...CCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGACTTGGCTTCCTGTTCTaGGATTCCAAAGACGTCTTG +
Preference number: 3 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGLGFLF*DSKDVL
Trigger: CAAGACGTCTTTGGAATCCAAGAACAGGAAGCCAAG...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAGACGCAGTCGGTATTTaGAGGCCTCCCCCACCCCCA +
Preference number: 3 (lower is better)
Translates to: SVEADARVSTSIKLLYIVDAVGI*RPPPPP
Trigger: TGGGGGTGGGGGAGGCCTCAAAATACCGACTGCGTC...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCTTGGTCTCACGAAGTTaGTGCATGCTGGAGCAAACG +
Preference number: 3 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPLVSRS*CMLEQT
Trigger: CGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAA...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCCTAGAGAAACAAACTaGTGGGTGTTGGGGTTGCAG +
Preference number: 3 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPPRETN*WVLGLQ
Trigger: CTGCAACCCCAACACCCACAAGTTTGTTTCTCTAGG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCATCCCTGCTCACTCTCTaGGCTTCCTGTTCTTGGATT +
Preference number: 3 (lower is better)
Translates to: LQSFPRGLHTLGAWENLASLLTL*ASCSWI
Trigger: AATCCAAGAACAGGAAGCCAAGAGAGTGAGCAGGGA...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp CTGGATCTTCTAGCAGCAGAAACAGGTAACATTCCCTaGATCTGCTGCATCAGCCCAAATGGGAGGAGACAG +
Preference number: 3 (lower is better)
Translates to: LDLLAAETGNIP*ICCISPNGRRQ
Trigger: CTGTCTCCTCCCATTTGGGCTGATGCAGCAGATCCAGGGAATGTTACCTGTTTCTGCTGCTAGAAGATCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp AAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTTCTACCATGGTGCACGACAGTCGTCGGTCTTaGTCTGAAGGTTTCAATTTG +
Preference number: 3 (lower is better)
Translates to: KNGGLSSRAKTRFSTMVHDSRRS*SEGFNL
Trigger: CAAATTGAAACCTTCAGACAAAGACCGACGACTGTC...GTGCACCATGGTAGAAAAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR TCA 72 bp GAGATAATTTCTGTGCATACTGAACGTGATCCACTTTaGAGGGGGCGTTTCTCCCTCTTTCGCCTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: EIISVHTERDPL*RGRFSLFRLGQ
Trigger: CTGACCCAGGCGAAAGAGGGAGAAACGCCCCCTTCAAAGTGGATCACGTTCAGTATGCACAGAAATTATCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR GCA 72 bp TGTTTCCTAGAGAAACAAACTTGTGGGTGTTGGGGTTaGAGGGAAGGCCTAAGCCTGCTGCCTGCTTTAAAC +
Preference number: 3 (lower is better)
Translates to: CFLEKQTCGCWG*REGLSLLPALN
Trigger: GTTTAAAGCAGGCAGCAGGCTTAGGCCTTCCCTGCAACCCCAACACCCACAAGTTTGTTTCTCTAGGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp CTTCTAGCAGCAGAAACAGGTAACATTCCCTGGATCTaGTGCATCAGCCCAAATGGGAGGAGACAGGAATGT +
Preference number: 3 (lower is better)
Translates to: LLAAETGNIPWI*CISPNGRRQEC
Trigger: ACATTCCTGTCTCCTCCCATTTGGGCTGATGCAGCAGATCCAGGGAATGTTACCTGTTTCTGCTGCTAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp GAGACAGTGAATGTGTTTCCTAGAGAAACAAACTTGTaGGTGTTGGGGTTGCAGGGAAGGCCTAAGCCTGCT +
Preference number: 3 (lower is better)
Translates to: ETVNVFPRETNL*VLGLQGRPKPA
Trigger: AGCAGGCTTAGGCCTTCCCTGCAACCCCAACACCCACAAGTTTGTTTCTCTAGGAAACACATTCACTGTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTACGTTGGTACTCACCTTCTTCTaGGTTAAGCAACTTGTACCA +
Preference number: 3 (lower is better)
Translates to: FCLSSMFPSSSPSGMGTLVLTFF*VKQLVP
Trigger: TGGTACAAGTTGCTTAACCAAGAAGAAGGTGAGTAC...CAACGTACCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR TCA 72 bp AATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTaGCCTTCCCGAAGAATCCCTGACACTACGGAATTA +
Preference number: 3 (lower is better)
Translates to: NGRHRGQNPSYC*PSRRIPDTTEL
Trigger: TAATTCCGTAGTGTCAGGGATTCTTCGGGAAGGTCAACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp TGGCTTCCTGTTCTTGGATTCCAAAGACGTCTTGGGTaGAGATGTTTCCTGGGACAGGCTCACTTTAACATC +
Preference number: 3 (lower is better)
Translates to: WLPVLGFQRRLG*RCFLGQAHFNI
Trigger: GATGTTAAAGTGAGCCTGTCCCAGGAAACATCTCCACCCAAGACGTCTTTGGAATCCAAGAACAGGAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAAGGATTTGTCAATGTTaGGGAACAGTGATTAGGTTT +
Preference number: 3 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRRICQC*GTVIRF
Trigger: AAACCTAATCACTGTTCCCAAACATTGACAAATCCT...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAATGATTTCACACGCTaGTTCAGCAACGTCCTTAGA +
Preference number: 3 (lower is better)
Translates to: LQSFPRGLHTLGAWENLANDFTR*FSNVLR
Trigger: TCTAAGGACGTTGCTGAACAAGCGTGTGAAATCATT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGAGGAGACAGGAATGTaGACCGTCCAGTGTATTTCA +
Preference number: 3 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCEETGM*TVQCIS
Trigger: TGAAATACACTGGACGGTCAACATTCCTGTCTCCTC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGCCGGAGCAATAATTTaGACTCCTGTGGTTTCTGAT +
Preference number: 3 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCAGAII*TPVVSD
Trigger: ATCAGAAACCACAGGAGTCAAAATTATTGCTCCGGC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp CAAAACATCTTTGAGCTGTTAGGCATCCGGGTTTCCTaGTTCTACAGCTCCAGGCCTGTCATTCAACGTGAA +
Preference number: 3 (lower is better)
Translates to: QNIFELLGIRVS*FYSSRPVIQRE
Trigger: TTCACGTTGAATGACAGGCCTGGAGCTGTAGAATCAGGAAACCCGGATGCCTAACAGCTCAAAGATGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp TGCTGCCTCTTATATCTTGGGAGATCGAAGTATTTCTaGGTTGCCCAGTGGGCAAAATCCTTACAGGGCATC +
Preference number: 3 (lower is better)
Translates to: CCLLYLGRSKYF*VAQWAKSLQGI
Trigger: GATGCCCTGTAAGGATTTTGCCCACTGGGCAACTCAGAAATACTTCGATCTCCCAAGATATAAGAGGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp TGTTTCCTGGGACAGGCTCACTTTAACATCTCTGGTTaGGGGATTCCAATGCTGAAAAATCCACAGATGGAG +
Preference number: 3 (lower is better)
Translates to: CFLGQAHFNISG*GIPMLKNPQME
Trigger: CTCCATCTGTGGATTTTTCAGCATTGGAATCCCCCAACCAGAGATGTTAAAGTGAGCCTGTCCCAGGAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TTCTTGGTTAAGCAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGATGCTTGCTTTCATTCTaGGGATCAGGAATAAGTTTC +
Preference number: 3 (lower is better)
Translates to: FLVKQLVPSTGRHLHQLRCLLSF*GSGISF
Trigger: GAAACTTATTCCTGATCCCAAGAATGAAAGCAAGCA...TCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR TCA 72 bp GATTCTGAGGCGAGCCATTGCTCATGGTTATCTACATaGCAGTCTTCCAACAATAACTGTCTTTGGCTGCTG +
Preference number: 3 (lower is better)
Translates to: DSEASHCSWLST*QSSNNNCLWLL
Trigger: CAGCAGCCAAAGACAGTTATTGTTGGAAGACTGTCATGTAGATAACCATGAGCAATGGCTCGCCTCAGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp CAATACCCACGAAGGGGCCAGTACCATAGAATTTTATaGACTGATTCTGAGGCGAGCCATTGCTCATGGTTA +
Preference number: 3 (lower is better)
Translates to: QYPRRGQYHRIL*TDSEASHCSWL
Trigger: TAACCATGAGCAATGGCTCGCCTCAGAATCAGTTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp GAATCCTTCATACTGTTGACCTTCCCGAAGAATCCCTaGCACTACGGAATTAACACAATTGTGGTTGACCCC +
Preference number: 3 (lower is better)
Translates to: ESFILLTFPKNP*HYGINTIVVDP
Trigger: GGGGTCAACCACAATTGTGTTAATTCCGTAGTGTCAGGGATTCTTCGGGAAGGTCAACAGTATGAAGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAGATTCCAAAGACGTCTaGGGTGGAGATGTTTCCTGG +
Preference number: 3 (lower is better)
Translates to: HLISHNTHEGASTIEFYEDSKDV*GGDVSW
Trigger: CCAGGAAACATCTCCACCCAAGACGTCTTTGGAATC...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp AGGGAACCATATAACCCAACCCCAGTTTTAAGATACTaGAAACTTAGAGGCCACTGCTGTCATCAACGTGCA +
Preference number: 3 (lower is better)
Translates to: REPYNPTPVLRY*KLRGHCCHQRA
Trigger: TGCACGTTGATGACAGCAGTGGCCTCTAAGTTTTCAGTATCTTAAAACTGGGGTTGGGTTATATGGTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR TCA 72 bp GGAATTAACACAATTGTGGTTGACCCCATTTCTAGATaGTGGCCTTCATCCATGTGTGCGTCAGGTAACCTT +
Preference number: 3 (lower is better)
Translates to: GINTIVVDPISR*WPSSMCASGNL
Trigger: AAGGTTACCTGACGCACACATGGATGAAGGCCATCATCTAGAAATGGGGTCAACCACAATTGTGTTAATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp CGAAGAATCCCTGACACTACGGAATTAACACAATTGTaGTTGACCCCATTTCTAGATGATGGCCTTCATCCA +
Preference number: 3 (lower is better)
Translates to: RRIPDTTELTQL*LTPFLDDGLHP
Trigger: TGGATGAAGGCCATCATCTAGAAATGGGGTCAACCACAATTGTGTTAATTCCGTAGTGTCAGGGATTCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp TTCCTTAACTGGATGTTCAGCCTCACTGGACTTCAGTaGAAATTACAACGAATTGCCAAGGGTGAGATAGGA +
Preference number: 3 (lower is better)
Translates to: FLNWMFSLTGLQ*KLQRIAKGEIG
Trigger: TCCTATCTCACCCTTGGCAATTCGTTGTAATTTTCACTGAAGTCCAGTGAGGCTGAACATCCAGTTAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR GCA 72 bp GGTAACTATGAAACAGACGTCAATAGGCACGTTTGCTaGTGCCTCTTATATCTTGGGAGATCGAAGTATTTC +
Preference number: 3 (lower is better)
Translates to: GNYETDVNRHVC*CLLYLGRSKYF
Trigger: GAAATACTTCGATCTCCCAAGATATAAGAGGCAGCAGCAAACGTGCCTATTGACGTCTGTTTCATAGTTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp AGTGGTAACTATGAAACAGACGTCAATAGGCACGTTTaGTGCTGCCTCTTATATCTTGGGAGATCGAAGTAT +
Preference number: 3 (lower is better)
Translates to: SGNYETDVNRHV*CCLLYLGRSKY
Trigger: ATACTTCGATCTCCCAAGATATAAGAGGCAGCAGCAAACGTGCCTATTGACGTCTGTTTCATAGTTACCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp AACCTAGAGCCAGACGTAACTTCTACAGAATTAAACTaGACACTGAGCATGACGTACCATCTTCCACTAAGA +
Preference number: 3 (lower is better)
Translates to: NLEPDVTSTELN*TLSMTYHLPLR
Trigger: TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGTTACGTCTGGCTCTAGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAACTAAGATAATGTTCTaGGTTGTAAGAGAGAGACCC +
Preference number: 3 (lower is better)
Translates to: SVEADARVSTSIKLLYIVTKIMF*VVRERP
Trigger: GGGTCTCTCTCTTACAACCAAGAACATTATCTTAGT...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp GTCCCAGATTTCTACAGACAGTCGTCGGTCTTTGTCTaGAGGTTTCAATTTGAATGTAAAGGACTCATTCCA +
Preference number: 3 (lower is better)
Translates to: VPDFYRQSSVFV*RFQFECKGLIP
Trigger: TGGAATGAGTCCTTTACATTCAAATTGAAACCTTCAGACAAAGACCGACGACTGTCTGTAGAAATCTGGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR TCA 72 bp CTCACTTTAACATCTCTGGTTGGGGGATTCCAATGCTaGAAAATCCACAGATGGAGGGTATGGAAAGTATAT +
Preference number: 3 (lower is better)
Translates to: LTLTSLVGGFQC*KIHRWRVWKVY
Trigger: ATATACTTTCCATACCCTCCATCTGTGGATTTTTCAGCATTGGAATCCCCCAACCAGAGATGTTAAAGTGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp CTCTGCGATATAACCAAATGGTGTTTGACGGTTGAATaGCCTCTACATTTTGTCAGTAGGTGCTTATACAGA +
Preference number: 3 (lower is better)
Translates to: LCDITKWCLTVE*PLHFVSRCLYR
Trigger: TCTGTATAAGCACCTACTGACAAAATGTAGAGGCCATTCAACCGTCAAACACCATTTGGTTATATCGCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CCA 72 bp AATTTACACATCCGTCTCCTCTGCGATATAACCAAATaGTGTTTGACGGTTGAATGGCCTCTACATTTTGTC +
Preference number: 3 (lower is better)
Translates to: NLHIRLLCDITK*CLTVEWPLHFV
Trigger: GACAAAATGTAGAGGCCATTCAACCGTCAAACACCATTTGGTTATATCGCAGAGGAGACGGATGTGTAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR-3UTR CAA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAAGAGACCCTGAACAGTaGATCACATTTGGACTAATA +
Preference number: 3 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRRDPEQ*ITFGLI
Trigger: TATTAGTCCAAATGTGATCAACTGTTCAGGGTCTCT...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp TTCCTGATTCTACAGCTCCAGGCCTGTCATTCAACGTaGACTAGAAATGGGAACCAAAACCATATTCTTTTT +
Preference number: 3 (lower is better)
Translates to: FLILQLQACHST*TRNGNQNHILF
Trigger: AAAAAGAATATGGTTTTGGTTCCCATTTCTAGTTCACGTTGAATGACAGGCCTGGAGCTGTAGAATCAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp ACTAAGATAATGTTCTTGGTTGTAAGAGAGAGACCCTaGACAGTTGATCACATTTGGACTAATAACCCTACA +
Preference number: 3 (lower is better)
Translates to: TKIMFLVVRERP*TVDHIWTNNPT
Trigger: TGTAGGGTTATTAGTCCAAATGTGATCAACTGTTCAGGGTCTCTCTCTTACAACCAAGAACATTATCTTAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR TCA 72 bp AAACGTATTAAAATCCTTCTATTAACAAAACATCTTTaGGCTGTTAGGCATCCGGGTTTCCTGATTCTACAG +
Preference number: 3 (lower is better)
Translates to: KRIKILLLTKHL*AVRHPGFLILQ
Trigger: CTGTAGAATCAGGAAACCCGGATGCCTAACAGCTCAAAGATGTTTTGTTAATAGAAGGATTTTAATACGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR GCA 72 bp TCTTTTATGAAGAAAGAACAATCCGATGGAAATCTCTaGCGCATAGAATACTGCTTGTGGTTCCTTAAATTT +
Preference number: 3 (lower is better)
Translates to: SFMKKEQSDGNL*RIEYCLWFLKF
Trigger: AAATTTAAGGAACCACAAGCAGTATTCTATGCGGCAGAGATTTCCATCGGATTGTTCTTTCTTCATAAAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGCCTCAGCGCCCCTTTaGGGGCGAAGCGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGASAPL*GRSGWP
Trigger: TGGCCAACCGCTTCGCCCGCAAAGGGGCGCTGAGGC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCCCCCAACCACCTCTTaGCTCCGCCGGGGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVPPTTS*LRRGAA
Trigger: CGCAGCTCCCCGGCGGAGGCAAGAGGTGGTTGGGGG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCTCAGGGAAAGGCCCTaGCACCGAGGAGTGGCCACC +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPLRERP*HRGVAT
Trigger: GGTGGCCACTCCTCGGTGGCAGGGCCTTTCCCTGAG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGATGCCAGCCCACGGCCTaGAGCCTCAGGGAAAGGCCC +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRCQPTA*SLRERP
Trigger: GGGCCTTTCCCTGAGGCTGCAGGCCGTGGGCTGGCA...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp CTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTaGACGGTGGCACCCCTTCCTCTCCCTCCTACTGCA +
Preference number: 4 (lower is better)
Translates to: LPSAPTTSDGKP*TVAPLPLPPTA
Trigger: TGCAGTAGGAGGGAGAGGAAGGGGTGCCACCGTCAACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGACGGGGGTGCTCCAGCTaGCCCAGGCTAAGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGRGCSS*PRLSPP
Trigger: AGGAGGACTTAGCCTGGGTCAGCTGGAGCACCCCCG...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CTCGAATTTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGGCCTCAGCGCCCCTTTaGGGGCGAAGCGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LEFLPEFHVSFLVPFRNGASAPL*GRSGWP
Trigger: TGGCCAACCGCTTCGCCCGCAAAGGGGCGCTGAGGC...CCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp GGCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACGGAGAGTCGGGCTGGTaGTGCGCGGAGCGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GIVIRGDDSSMCITAPEDGESGW*CAERER
Trigger: CCGCTCCCGCTCCGCGCAGCACCAGCCCGACTCTCC...GTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp CTCGAATTTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTGCGGGCGAAGCGGTTaGCCACGTCCTGAGACGCCG +
Preference number: 4 (lower is better)
Translates to: LEFLPEFHVSFLVPFRNGCGRSG*PRPETP
Trigger: CGGCGTCTCAGGACGTGGCCAACCGCTTCGCCCGCA...CCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp ATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGTGGGACAAGATGCGGGGAGAGTCGGGCTaGTGCTGCGCGGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: MTAPCVLLPLKTFQWDKMRGESG*CCAERE
Trigger: CTCCCGCTCCGCGCAGCACCAGCCCGACTCTCCCCG...CATCTTGTCCCACTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGGGACCAGGCGGGTCTaGGCACAGAGCCAAGGAAGC +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGGTRRV*AQSQGS
Trigger: GCTTCCTTGGCTCTGTGCCCAGACCCGCCTGGTCCC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp AAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTTCTACCATGGTGCACCGGTTGGCCACGTCCTaGGACGCCGTGGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: KNGGLSSRAKTRFSTMVHRLATS*DAVESL
Trigger: CAACGACTCCACGGCGTCTCAGGACGTGGCCAACCG...GTGCACCATGGTAGAAAAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGGAGAGTCGGGCTGGTaGTGCGCGGAGCGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCGESGW*CAERER
Trigger: CCGCTCCCGCTCCGCGCAGCACCAGCCCGACTCTCC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GGCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCCCCCAACCACCTCTTaGCTCCGCCGGGGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: GIVIRGDDSSMCITAPEDPPTTS*LRRGAA
Trigger: CGCAGCTCCCCGGCGGAGGCAAGAGGTGGTTGGGGG...GTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp GCCCCTGAAGACCTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGACGCCGTGGAGTCGTTaGCCGGGAAAACGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: APEDLPVGQDAEVRDSHMTPWSR*PGKRQP
Trigger: TGGCTGACGTTTTCCCGGGCAACGACTCCACGGCGT...CATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAGGTCTTCAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp GCCCCTGAAGACCTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGCGTCCTGAGACGCCGTaGAGTCGTTGCCCGGGAAAA +
Preference number: 4 (lower is better)
Translates to: APEDLPVGQDAEVRDSHMRPETP*SRCPGK
Trigger: TTTTCCCGGGCAACGACTCCACGGCGTCTCAGGACG...CATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAGGTCTTCAGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGATCTTCCTCCTCTCTaGGGGGCCTCGTGGGGGTCT +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGDLPPL*GASWGS
Trigger: AGACCCCCACGAGGCCCCCCAGAGAGGAGGAAGATC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGCCTCTGGGGTACACTaGATGGTCTGGCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPASGVH*MVWLCP
Trigger: TGGGCAGAGCCAGACCATCCAGTGTACCCCAGAGGC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACGGTTGGCCACGTCCTaGGACGCCGTGGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLARLATS*DAVESL
Trigger: CAACGACTCCACGGCGTCTCAGGACGTGGCCAACCG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGGCATCCGGGTTTCCTaGTTCTACAGCTCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPGIRVS*FYSSRP
Trigger: AGGCCTGGAGCTGTAGAATCAGGAAACCCGGATGCC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAACCCAGATCATGCACTaGCCTGCAGGGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGTQIMH*PAGLQG
Trigger: TCCCTGCAGCCCTGCAGGTCAGTGCATGATCTGGGT...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCGGCCAAGTTCCACCTaGACTTGCAGTCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRRPSST*TCSHSH
Trigger: GTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGAGTGCAGCTGCGTCAAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTCGCGCGATGAATTTGTaGTCCTTCACCTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: GVQLRQERGFVKQGQDSLRAMNL*SFTSCT
Trigger: CGTGCACGAGGTGAAGGACCACAAATTCATCGCGCG...AAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTTGACGCAGCTGCACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCCCTCAGGCAGTGTGCTaGGCACCCCTGTCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTPQAVC*APLSGH
Trigger: ATGCCCCGACAGGGGTGCCCAGCACACTGCCTGAGG...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGTGGTCATAGCTCCATaGGTCCTGCGGGGATTCGGA +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPVVIAP*VLRGFG
Trigger: TCCGAATCCCCGCAGGACCCATGGAGCTATGACCAC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGACAGTGGCCCTGCATaGACCACACGAGGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVDSGPA*TTRGQW
Trigger: CCACTGGCCTCGTGTGGTCCATGCAGGGCCACTGTC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGTGGGCAGGAACCTACTaGCCTCTGGGGTACACTGGA +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPWAGTY*PLGYTG
Trigger: TCCAGTGTACCCCAGAGGCCAGTAGGTTCCTGCCCA...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGGGAAAATCTGGCAGTaGGAGATCAGGTCGGGGGTG +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPGKIWQ*EIRSGV
Trigger: CACCCCCGACCTGATCTCCCACTGCCAGATTTTCCC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGGATGATCCTGACACTCCTAACCTCAGGTaGTCCACCCGCCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LPVGQDAEVRDSHMDDPDTPNLR*STRLGL
Trigger: CAGGCCAAGGCGGGTGGATCACCTGAGGTTAGGAGT...GTCAGGATCATCCATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp TTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCGCCTCAGCGCCCCTTTaGGGGCGAAGCGGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LLSGVMTAPCVLLPLKTFASAPL*GRSGWP
Trigger: TGGCCAACCGCTTCGCCCGCAAAGGGGCGCTGAGGC...GAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGTGGTCCTTCACCTCGTaGACGTTCTTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPWSFTS*TFFCLS
Trigger: GCTGAGGCAGAAGAACGTGCACGAGGTGAAGGACCA...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CTCGAATTTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGACGATCTTGGCTCACTaGAGCCTCCGCCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LEFLPEFHVSFLVPFRNGTILAH*SLRLSG
Trigger: GCCTGAGAGGCGGAGGCTGCAGTGAGCCAAGATCGT...CCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCAAACGACAGGTCGTTaGAGAGGCAGCAAGACAGCA +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRQTTGR*RGSKTA
Trigger: TGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAAAAGCACGTGCTGGTaGCTGCAGGGCACGGCTGTG +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPKSTCW*LQGTAV
Trigger: CACAGCCGTGCCCTGCAGGCACCAGCACGTGCTTTT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCCCCCAGGGACCTCCTaGGTGGCTGCGGCAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCPPGTS*VAAAVP
Trigger: TGGAACTGCCGCAGCCACGCAGGAGGTCCCTGGGGG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGGCTCTCTGGAAGTCTaGATCCTCCTTCCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRGSLEV*ILLPGS
Trigger: ACTTCCTGGAAGGAGGATGCAGACTTCCAGAGAGCC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTATTCCCTGGATCTGCTaGATCAGCCCAAATGGGAGG +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRIPWIC*ISPNGR
Trigger: CCTCCCATTTGGGCTGATGCAGCAGATCCAGGGAAT...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCGTCCTGAGACGCCGTaGAGTCGTTGCCCGGGAAAA +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVRPETP*SRCPGK
Trigger: TTTTCCCGGGCAACGACTCCACGGCGTCTCAGGACG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTACGGGGAGAGTCGGGCTaGTGCTGCGCGGAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVRGESG*CCAERE
Trigger: CTCCCGCTCCGCGCAGCACCAGCCCGACTCTCCCCG...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAGCTGCTGCTCCATTCTaGGCAGGGGGACTGGCCCTT +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAAAAPF*AGGLAL
Trigger: AAGGGCCAGTCCCCCTGCCCAGAATGGAGCAGCAGC...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp TGCCTGCAGGGCACGGCTGTGTTGGTCTCACGAAGTTaGTGCATGCTGGAGCAAACGACAGGTCGTTGCAGA +
Preference number: 4 (lower is better)
Translates to: CLQGTAVLVSRS*CMLEQTTGRCR
Trigger: TCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAACACAGCCGTGCCCTGCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp GACTTCCTTTCAAACCCAGCACCTGGTGACCTTCAATaGAAATGCCAAGAGACGGGCTGCCAGCCCACGGCC +
Preference number: 4 (lower is better)
Translates to: DFLSNPAPGDLQ*KCQETGCQPTA
Trigger: GGCCGTGGGCTGGCAGCCCGTCTCTTGGCATTTCAATTGAAGGTCACCAGGTGCTGGGTTTGAAAGGAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp ATTAGTTCTTGCCTGGATGTGGGCCTCTCATTAACCTaGGAGGGCGGCCCCTGGCAGCACTCCAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: ISSCLDVGLSLT*EGGPWQHSSDF
Trigger: GAAGTCACTGGAGTGCTGCCAGGGGCCGCCCTCCAAGGTTAATGAGAGGCCCACATCCAGGCAAGAACTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCGGTTGGCCACGTCCTaGGACGCCGTGGAGTCGTTG +
Preference number: 4 (lower is better)
Translates to: LLSGVMTAPCVLLPLKTFRLATS*DAVESL
Trigger: CAACGACTCCACGGCGTCTCAGGACGTGGCCAACCG...GAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR TCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCAGAACCCGGCTACTCTaGGGACCTTGCATGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTRTRLL*GPCMGV
Trigger: CACCCCCATGCAAGGTCCTCAGAGTAGCCGGGTTCT...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGGCTGTTTGGGGTGCTaGACAAGGGTCCCTAACCTC +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPGCLGC*TRVPNL
Trigger: GAGGTTAGGGACCCTTGTTCAGCACCCCAAACAGCC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCACGCCGTGGAGTCGTTaGCCGGGAAAACGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTTPWSR*PGKRQP
Trigger: TGGCTGACGTTTTCCCGGGCAACGACTCCACGGCGT...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGAAAGGTCAGCCCAGGTaGTGCGGCAATGCCACGTGT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVKGQPR*CGNATC
Trigger: ACACGTGGCATTGCCGCAGCACCTGGGCTGACCTTT...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGCACGTGCTGGTGCCTaGAGGGCACGGCTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCARAGA*RARLCW
Trigger: CCAACACAGCCGTGCCCTGCAGGCACCAGCACGTGC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCACGAACCCAGATCATaGACTGACCTGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVHEPRS*TDLQGC
Trigger: GCAGCCCTGCAGGTCAGTGCATGATCTGGGTTCGTG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGACCTCCTGCGTGGCTaGGGCAGTTCCACAGCGCAC +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCDLLRG*GSSTAH
Trigger: GTGCGCTGTGGAACTGCCGCAGCCACGCAGGAGGTC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGACTGTCATGCCTACTaGTGTCCCGGTAACTCTCAT +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRDCHAY*CPGNSH
Trigger: ATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGAGTGATCGCAGAAGGTaGGGCTTCCGTAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPSDRRR*GFRKCG
Trigger: TCCACACTTACGGAAGCCCCACCTTCTGCGATCACT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAACCACGTCCCCTTCCGGAATaGGTACGTTGTAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: HANTSCTKTSGLALEAQPRPLPE*VRCSTH
Trigger: GTGAGTACTACAACGTACCCATTCCGGAAGGGGACG...TGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCGTCCCCTTCCGGAATaGGTACGTTGTAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPRPLPE*VRCSTH
Trigger: GTGAGTACTACAACGTACCCATTCCGGAAGGGGACG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGAGCCGATCCACTGTCTaGAAGCAGGAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVSRSTV*KQECSC
Trigger: GCAGCTGCACTCCTGCTTCCAGACAGTGGATCGGCT...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGTGGTGTGTGTGGGGGTaGGTGTTGGTGAACAACACT +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPWCVWG*VLVNNT
Trigger: AGTGTTGTTCACCAACACCCACCCCCACACACACCA...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCCTGAAAAGCACGTGCTaGTGCCTGCAGGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTLKSTC*CLQGTA
Trigger: AGCCGTGCCCTGCAGGCACCAGCACGTGCTTTTCAG...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCGCTCCTCCCAAGACTaGAAAGGCCAATGCCACAAT +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPRSSQD*KGQCHN
Trigger: ATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAGAAATGGTTCTTTTCTaGCCGGGCCCGTTCCCTACC +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIREMVLF*PGPFPT
Trigger: GGTAGGGAACGGGCCCGGCCAGAAAAGAACCATTTC...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGGAGCCAGGACCCCCTaGAGTCTCGATGTCTATGGT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVGARTP*SLDVYG
Trigger: ACCATAGACATCGAGACTCCAGGGGGTCCTGGCTCC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAAACAGGCAGGCTGTTTaGGGTGCTGAACAAGGGTCC +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGNRQAV*GAEQGS
Trigger: GGACCCTTGTTCAGCACCCCAAACAGCCTGCCTGTT...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAGACCTCCACAGGCCCTaGCAATCAGGCAGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLADLHRP*QSGSAQ
Trigger: CTGAGCACTGCCTGATTGCCAGGGCCTGTGGAGGTC...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGTGATTACGATTGTCTaGTGTGCCCAGCAGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRVITIV*CAQQGK
Trigger: TTTCCCCTGCTGGGCACACCAGACAATCGTAATCAC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp CTCGCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTaGCAGTCATTCCCACGTGGACTCCATACCCTAGGA +
Preference number: 4 (lower is better)
Translates to: LAEHQSAKFHLN*QSFPRGLHTLG
Trigger: TCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCGTAAGTGTGGATTTTaGACTTGTGCTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRRKCGF*TCACSW
Trigger: CCAGGAGCAAGCACAAGTTCAAAATCCACACTTACG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGGGGGATTCCAATGCTaGAAAATCCACAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPGGFQC*KIHRWR
Trigger: CCTCCATCTGTGGATTTTTCAGCATTGGAATCCCCC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCCTTGTCCTTCCTGGTaGCTGTCATGCCTACTGCTG +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPPCPSW*LSCLLL
Trigger: CAGCAGTAGGCATGACAGTCACCAGGAAGGACAAGG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCAGGTGGAGGTTGCAGTaGGCCGAGATTGTACCACCG +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTRWRLQ*AEIVPP
Trigger: CGGTGGTACAATCTCGGCTCACTGCAACCTCCACCT...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTCTTGGTTAAGCAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGATCGTGCACGTTCTTCTaGCTCAGCGCCCCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: FLVKQLVPSTGRHLHQLRSCTFF*LSAPLR
Trigger: CCGCAAAGGGGCGCTGAGGCAGAAGAACGTGCACGA...TCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp AAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTTCTACCATGGTGCACTGGTCCTTCACCTCGTaGACGTTCTTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KNGGLSSRAKTRFSTMVHWSFTS*TFFCLS
Trigger: GCTGAGGCAGAAGAACGTGCACGAGGTGAAGGACCA...GTGCACCATGGTAGAAAAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp CAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGATTGCCCAGGCTGCAGTaGAGTGGCACGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: QLVPSTGRHLHQLRNSKGLPRLQ*SGTILA
Trigger: AGCCAAGATCGTGCCACTGCACTGCAGCCTGGGCAA...TCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTGGTCATCAGTCCTTTaGAGACAGAAACAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRWSSVL*RQKQPP
Trigger: AGGAGGCTGTTTCTGTCTGCAAAGGACTGATGACCA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACTCCGGAAGAAGGCATaGTCTCTCACGTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLALRKKA*SLTSLS
Trigger: GGAGAGGGACGTGAGAGAGCATGCCTTCTTCCGGAG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCAGGTGCTGCGGCAATaGCACGTGTGTACCAACGTA +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVQVLRQ*HVCTNV
Trigger: TACGTTGGTACACACGTGGCATTGCCGCAGCACCTG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAAGACAGCATGCTTCCTaGGTGTCCAGTACACACAGC +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRRQHAS*VSSTHS
Trigger: GCTGTGTGTACTGGACACGCAGGAAGCATGCTGTCT...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGGCAGCAAGACAGCATaGTTCCTGCGTGTCCAGTAC +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVGSKTA*FLRVQY
Trigger: GTACTGGACACGCAGGAAGCATGCTGTCTTGCTGCC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTCTTGGTTAAGCAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGACGTCCTGAGACGCCGTaGAGTCGTTGCCCGGGAAAA +
Preference number: 4 (lower is better)
Translates to: FLVKQLVPSTGRHLHQLRRPETP*SRCPGK
Trigger: TTTTCCCGGGCAACGACTCCACGGCGTCTCAGGACG...TCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp AGGGAAGTCACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGAGTGATCGCAGAAGGTaGGGCTTCCGTAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: REVTPTPAALKRQVLLSRSDRRR*GFRKCG
Trigger: TCCACACTTACGGAAGCCCCACCTTCTGCGATCACT...CCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGCAGCAGGGCCAAGTTTaGCTTTCTCGAATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTQQGQV*LSRISA
Trigger: GGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTG...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGCACATTGGCAGCAGCTaGGGCAATCTTTGCAGACAA +
Preference number: 4 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTHIGSS*GNLCRQ
Trigger: TTGTCTGCAAAGATTGCCCCAGCTGCTGCCAATGTG...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCCCTGCTCACTCTCTTaGCTTCCTGTTCTTGGATTC +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPPCSLS*LPVLGF
Trigger: GAATCCAAGAACAGGAAGCCAAGAGAGTGAGCAGGG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAAGGCCAATGCCACAATaGCTGGAAGAAAGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRRPMPQ*LEESPQ
Trigger: CTGCGGACTTTCTTCCAGCCATTGTGGCATTGGCCT...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGGGCTGCATGAACCTTaGTCTTTCCGGCCAGGCTTC +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTGLHEP*SFRPGF
Trigger: GAAGCCTGGCCGGAAAGACCAAGGTTCATGCAGCCC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTAACAGACTGTGTCCCTaGCAAAACACTCTCTTGAGG +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRNRLCP*QNTLLR
Trigger: CCTCAAGAGAGTGTTTTGCCAGGGACACAGTCTGTT...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGCAGTCATTCCCACGTaGACTCCATACCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVAVIPT*TPYPRS
Trigger: GCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp CAACGTACTAGGCAGACTGGAATCAGACACTTCCTGTaGTCCCCAAGAGGAAGAGTGGCGGAGGAACCAGGA +
Preference number: 4 (lower is better)
Translates to: QRTRQTGIRHFL*SPRGRVAEEPG
Trigger: TCCTGGTTCCTCCGCCACTCTTCCTCTTGGGGACAACAGGAAGTGTCTGATTCCAGTCTGCCTAGTACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp ACGAAGTTTGTGCATGCTGGAGCAAACGACAGGTCGTaGCAGAGGCAGCAAGACAGCATGCTTCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: TKFVHAGANDRS*QRQQDSMLPAC
Trigger: ACACGCAGGAAGCATGCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGCTCCAGCATGCACAAACTTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp GGACTTTGGCTCCGAGAGGTGCTCAACAATCATTTGTaGGGCTGCATGAACCTTGGTCTTTCCGGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GLWLREVLNNHL*GCMNLGLSGQA
Trigger: AGCCTGGCCGGAAAGACCAAGGTTCATGCAGCCCAACAAATGATTGTTGAGCACCTCTCGGAGCCAAAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTTCCCAAACCCCCAGATaGAGTCGGTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTSQTPR*SRCSGC
Trigger: GCAGCCACTGCACCGACTTCATCTGGGGGTTTGGGA...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTCCCAAACCCCCAGATaGAGTCGGTGCAGTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCSQTPR*SRCSGC
Trigger: GCAGCCACTGCACCGACTTCATCTGGGGGTTTGGGA...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGTTTGTTCTCGCTGGTaGGTTTCATACTGCACTCTG +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPVCSRW*VSYCTL
Trigger: CAGAGTGCAGTATGAAACTCACCAGCGAGAACAAAC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGGGGGTGGGTGTTGGTaGACAACACTGGTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTGGGCW*TTLVSS
Trigger: ACTACTCACCAGTGTTGTTCACCAACACCCACCCCC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGTGGTTGTGTGTTCTGTaGACTTCAGGCAAACAGCCA +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPWLCVL*TSGKQP
Trigger: TGGCTGTTTGCCTGAAGTTCACAGAACACACAACCA...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGACTTTGCCATATGGTCTaGGAGAGTAACAGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGLCHMV*ESNSQL
Trigger: CAGCTGGCTGTTACTCTCTCAGACCATATGGCAAAG...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGACCCCATTTCTAGATaGTGGCCTTCATCCATGTGT +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPDPISR*WPSSMC
Trigger: ACACATGGATGAAGGCCATCATCTAGAAATGGGGTC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCCATCATGTGTTCCTTaGACATCCCAAAGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRPSCVP*TSQSQQ
Trigger: TTGCTGACTTTGGGATGTGCAAGGAACACATGATGG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAACAGAAACTTCCATCTaGACCAACCACCTCCGATGG +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRTETSI*TNHLRW
Trigger: CCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGT...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGAGGCACGTTTGCTGCTaGCTCTTATATCTTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPRHVCC*LLYLGR
Trigger: TCTCCCAAGATATAAGAGGCAGCAGCAAACGTGCCT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGAGTGCAGCTGCGTCAAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTCATGGCACCTCTTGTaGACCACAAAACAGCAAACT +
Preference number: 4 (lower is better)
Translates to: GVQLRQERGFVKQGQDSLSWHLL*TTKQQT
Trigger: AGTTTGCTGTTTTGTGGTCCACAAGAGGTGCCATGA...AAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTTGACGCAGCTGCACTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTCATGGCACCTCTTGTaGACCACAAAACAGCAAACT +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRSWHLL*TTKQQT
Trigger: AGTTTGCTGTTTTGTGGTCCACAAGAGGTGCCATGA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAACTTGTGCTTGCTCCTaGGGTCCTTCGGAGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QLVPSTGRHLHQLRNSKGTCACS*GPSESE
Trigger: CTCACTCTCCGAAGGACCCCAGGAGCAAGCACAAGT...TCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp CTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGGATGATCCTGACAGTGATCGCAGAAGGTaGGGCTTCCGTAAGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LPVGQDAEVRDSHMDDPDSDRRR*GFRKCG
Trigger: TCCACACTTACGGAAGCCCCACCTTCTGCGATCACT...GTCAGGATCATCCATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp AACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAAAGCCGATCCACTGTCTaGAAGCAGGAGTGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NLYHPLAGIFISSETPKESRSTV*KQECSC
Trigger: GCAGCTGCACTCCTGCTTCCAGACAGTGGATCGGCT...TTCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGACAAAGACGTCTTGGGTaGAGATGTTTCCTGGGACAG +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGQRRLG*RCFLGQ
Trigger: CTGTCCCAGGAAACATCTCCACCCAAGACGTCTTTG...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGATTCCAAAGACGTCTTaGGTGGAGATGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPIPKTS*VEMFPG
Trigger: CCCAGGAAACATCTCCACCCAAGACGTCTTTGGAAT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGACCACACGAGGCCAGTaGATGAAAGGAAGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVTTRGQ*MKGREA
Trigger: TGCTTCCCTTCCTTTCATCCACTGGCCTCGTGTGGT...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAAACCCTGTTCTTCTCTaGCTCCTTCCTGACTACAGC +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGNPVLL*LLPDYS
Trigger: GCTGTAGTCAGGAAGGAGCCAGAGAAGAACAGGGTT...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCAAGCTCCAGGGCATTaGAATCTTAGGAAATCGTCA +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRQAPGH*NLRKSS
Trigger: TGACGATTTCCTAAGATTCCAATGCCCTGGAGCTTG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp CTCCTTCCAGGAAGTCACCACACTCGCCTAAGGACTTaGGCTCCGAGAGGTGCTCAACAATCATTTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LLPGSHHTRLRT*APRGAQQSFVG
Trigger: CCCAACAAATGATTGTTGAGCACCTCTCGGAGCCAAAGTCCTTAGGCGAGTGTGGTGACTTCCTGGAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp AAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTTCTACCATGGTGCACGGGTCCTTCGGAGAGTaGGTAGGATCTCAAAAGGTA +
Preference number: 4 (lower is better)
Translates to: KNGGLSSRAKTRFSTMVHGSFGE*VGSQKV
Trigger: TACCTTTTGAGATCCTACTCACTCTCCGAAGGACCC...GTGCACCATGGTAGAAAAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAGAAGGTCCTGGTCGTaGCTCCATCCATCATGTGTT +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPRRSWS*LHPSCV
Trigger: AACACATGATGGATGGAGTCACGACCAGGACCTTCT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp AGGGAAGTCACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGAGGCCCAACCAGAGCTaGAGTATTCACATAACACAG +
Preference number: 4 (lower is better)
Translates to: REVTPTPAALKRQVLLSRRPNQS*SIHITQ
Trigger: CTGTGTTATGTGAATACTTCAGCTCTGGTTGGGCCT...CCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGCACAAACTGGGGGTTaGCATACGAGAACCCTTCAA +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPAQTGG*HTRTLQ
Trigger: TTGAAGGGTTCTCGTATGTCAACCCCCAGTTTGTGC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGCCTGTCATTCAACGTaGACTAGAAATGGGAACCAA +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPACHST*TRNGNQ
Trigger: TTGGTTCCCATTTCTAGTTCACGTTGAATGACAGGC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGAACCAGGACGAAAGGTaGCATGAAGAAACTAAGAGG +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPNQDER*HEETKR
Trigger: CCTCTTAGTTTCTTCATGTCACCTTTCGTCCTGGTT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCTGGTGACCTTCAATTaGAATGCCAAGAGACGGGCT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVLVTFN*NAKRRA
Trigger: AGCCCGTCTCTTGGCATTTCAATTGAAGGTCACCAG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCCTGCCCAGAGAACTATaGGCTACTTCAAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTLPREL*ATSRWG
Trigger: TCCCCACCTTGAAGTAGCTCATAGTTCTCTGGGCAG...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGAGGCAGGCAGATCATaGGGTCAGGGGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCEAGRS*GQGFKT
Trigger: GGTCTTGAACCCCTGACCTCATGATCTGCCTGCCTC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTGGTCCTTCACCTCGTaGACGTTCTTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ALLSGVMTAPCVLLPLKTWSFTS*TFFCLS
Trigger: GCTGAGGCAGAAGAACGTGCACGAGGTGAAGGACCA...GGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp TTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTACGTTGCACGCCAACACCAGCTaGACTAAAACGTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: FCLSSMFPSSSPSGMGTLHANTS*TKTSGL
Trigger: AAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTG...CAACGTACCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp AATCCGCCCCCTCTTCTCAGTGTGATCCATTCCGCAGAGGCTGGGGACATTGATAGCTGGGGCAATCTTTaGAGACAAACTTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NPPPLLSVIHSAEAGDIDSWGNL*RQTCRE
Trigger: TTCCCTGCAAGTTTGTCTGCAAAGATTGCCCCAGCT...ATCAATGTCCCCAGCCTCTGCGGAATGGATCACACTGAGAAGAGGGGGCGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCTCTGTAAGATGGGGTaGACAAACTGGGGGTTGACA +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVLCKMG*TNWGLT
Trigger: TGTCAACCCCCAGTTTGTGCACCCCATCTTACAGAG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCACGAAGTTTGTGCATaGTGGAGCAAACGACAGGTC +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVHEVCA*WSKRQV
Trigger: GACCTGTCGTTTGCTCCAGCATGCACAAACTTCGTG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAGGTCTGTCCTGCTGCTaGTCCATTCTGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVGLSCC*SILGRG
Trigger: CCCCCTGCCCAGAATGGAGCAGCAGCAGGACAGACC...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAGTCCCTCAGGCAGTGTaGTGGGCACCCCTGTCGGGG +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRVPQAV*WAPLSG
Trigger: CCCCGACAGGGGTGCCCAGCACACTGCCTGAGGGAC...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAACATTCCCTGGATCTaGTGCATCAGCCCAAATGGG +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPNIPWI*CISPNG
Trigger: CCCATTTGGGCTGATGCAGCAGATCCAGGGAATGTT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGATGCGGGCGAAGCGGTTaGCCACGTCCTGAGACGCCG +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRCGRSG*PRPETP
Trigger: CGGCGTCTCAGGACGTGGCCAACCGCTTCGCCCGCA...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGCGCGCGATGAATTTGTaGTCCTTCACCTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: LSGVMTAPCVLLPLKTFQRAMNL*SFTSCT
Trigger: CGTGCACGAGGTGAAGGACCACAAATTCATCGCGCG...CTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGACTGCGGATTTAGTGTaGAGCGGATGGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPTADLV*SGWFWF
Trigger: AAACCAAAACCATCCGCTCCACACTAAATCCGCAGT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GACGTAAGTGAACTGAGTGAATCCTCCCAGCAGTCCTATGCGGCAGTCTCTATTACTTGTGCTTGCTCCTaGGGTCATCAGTGTCGGGTC +
Preference number: 4 (lower is better)
Translates to: DVSELSESSQQSYAAVSITCACS*GHQCRV
Trigger: GACCCGACACTGATGACCCCAGGAGCAAGCACAAGT...AATAGAGACTGCCGCATAGGACTGCTGGGAGGATTCACTCAGTTCACTTACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCAGAAACAGCCTCCTTaGACAAGGATTTTGGATAGG +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPQKQPP*TRILDR
Trigger: CCTATCCAAAATCCTTGTCCAAGGAGGCTGTTTCTG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGCACTTTGGGCTTGAATaGTGGCTGGATCTCCCTGTT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVHFGLE*WLDLPV
Trigger: AACAGGGAGATCCAGCCACCATTCAAGCCCAAAGTG...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAGGGCACGGCTGTGTTaGTCTCACGAAGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLARARLC*SHEVCA
Trigger: TGCACAAACTTCGTGAGACCAACACAGCCGTGCCCT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAGATGGCAGAAGAAATaGTTCTTTTCTGGCCGGGCC +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPRWQKK*FFSGRA
Trigger: GGCCCGGCCAGAAAAGAACCATTTCTTCTGCCATCT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAAGAGAAACAAACTTGTaGGTGTTGGGGTTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRRETNL*VLGLQG
Trigger: TCCCTGCAACCCCAACACCCACAAGTTTGTTTCTCT...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCTGCATCAGCCCAAATaGGAGGAGACAGGAATGTTG +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPLHQPK*EETGML
Trigger: CAACATTCCTGTCTCCTCCCATTTGGGCTGATGCAG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCACAGGTAACATTCCCTaGATCTGCTGCATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPTGNIP*ICCISP
Trigger: TGGGCTGATGCAGCAGATCCAGGGAATGTTACCTGT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGAGGGCTGCCTCTGGATaGGGGACACTAAAAATGTCT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVRAASG*GTLKMS
Trigger: AGACATTTTTAGTGTCCCCCATCCAGAGGCAGCCCT...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp AATCCGCCCCCTCTTCTCAGTGTGATCCATTCCGCAGAGGCTGGGGACATTGATAGGAAAGGGATCCCATaGAGTCATTCCTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: NPPPLLSVIHSAEAGDIDRKGIP*SHSLLF
Trigger: GAACAACAAGGAATGACTTCATGGGATCCCTTTCCT...ATCAATGTCCCCAGCCTCTGCGGAATGGATCACACTGAGAAGAGGGGGCGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGAGAACGTGATCCACTTTaGAGGGGGCGTTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRERDPL*RGRFSL
Trigger: GAGGGAGAAACGCCCCCTTCAAAGTGGATCACGTTC...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGCTCACTGGACTTCAGTaGAAATTACAACGAATTGCC +
Preference number: 4 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTLTGLQ*KLQRIA
Trigger: GGCAATTCGTTGTAATTTTCACTGAAGTCCAGTGAG...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCAGAGTAACAGCCAGCTaGGACAGTGAATGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPRVTAS*DSECVS
Trigger: GGAAACACATTCACTGTCTCAGCTGGCTGTTACTCT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAACTGTCTTTGGCTGCTaGGATCTGGAAAGCCCTAAC +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLATVFGC*DLESPN
Trigger: GTTAGGGCTTTCCAGATCTCAGCAGCCAAAGACAGT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGACCGATGGGAAGCCGTTaGCGGTGGCACCCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRPMGSR*RWHPFL
Trigger: GAGGAAGGGGTGCCACCGTCAACGGCTTCCCATCGG...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAACCAACGTGAGAAAATaGCTGTCAGATGGTATCACC +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGTNVRK*LSDGIT
Trigger: GGTGATACCATCTGACAGTCATTTTCTCACGTTGGT...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATTCCCGAAGAATCCCTaGCACTACGGAATTAACACA +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGFPKNP*HYGINT
Trigger: TGTGTTAATTCCGTAGTGTCAGGGATTCTTCGGGAA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GGCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACGTGTATTACTGCCCCTaGAGACCTTCCAGTGGGACA +
Preference number: 4 (lower is better)
Translates to: GIVIRGDDSSMCITAPEDVYYCP*RPSSGT
Trigger: TGTCCCACTGGAAGGTCTTCAGGGGCAGTAATACAC...GTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTATCGTGCACGTTCTTCTaGCTCAGCGCCCCTTTGCGG +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVSCTFF*LSAPLR
Trigger: CCGCAAAGGGGCGCTGAGGCAGAAGAACGTGCACGA...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAAGGACTCATTCCACTaGGGATTTAGTGTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAKDSFH*GFSVER
Trigger: CCGCTCCACACTAAATCCGCAGTGGAATGAGTCCTT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGACATACAGTTCTTCTGTaGCCTTCCTGTCGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: QLVPSTGRHLHQLRNSKGHTVLL*PSCRQA
Trigger: TGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATG...TCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp AGGGAAGTCACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGTCCGATGGAAATCTCTaGCGCATAGAATACTGCTTG +
Preference number: 4 (lower is better)
Translates to: REVTPTPAALKRQVLLSRSDGNL*RIEYCL
Trigger: CAAGCAGTATTCTATGCGGCAGAGATTTCCATCGGA...CCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGATCCGATGGAAATCTCTaGCGCATAGAATACTGCTTG +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRSDGNL*RIEYCL
Trigger: CAAGCAGTATTCTATGCGGCAGAGATTTCCATCGGA...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AGGGAAGTCACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGCCATCATGTGTTCCTTaGACATCCCAAAGTCAGCAA +
Preference number: 4 (lower is better)
Translates to: REVTPTPAALKRQVLLSRPSCVP*TSQSQQ
Trigger: TTGCTGACTTTGGGATGTGCAAGGAACACATGATGG...CCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGCTTAAGCAATTCTCATaGCTCAGTAGCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTLKQFS*LSSSSS
Trigger: GCTACTTGAGCTACTGAGGCATGAGAATTGCTTAAG...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAGGTCAGCCCAGGTGCTaGGGCAATGCCACGTGTGTA +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVGQPRC*GNATCV
Trigger: TACACACGTGGCATTGCCGCAGCACCTGGGCTGACC...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGTCTCACGAAGTTTGTaGATGCTGGAGCAAACGACA +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVVSRSL*MLEQTT
Trigger: TGTCGTTTGCTCCAGCATGCACAAACTTCGTGAGAC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGACTGGAAAGGCCAATaGCACAATGGCTGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVDWKGQ*HNGWKK
Trigger: TTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAGACCTTCAATTGAAATaGCAAGAGACGGGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLADLQLK*QETGCQ
Trigger: CTGGCAGCCCGTCTCTTGGCATTTCAATTGAAGGTC...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCTCCAGTGGGACAAGATaGAGAGGTGAGGGACAGCCA +
Preference number: 4 (lower is better)
Translates to: LLSGVMTAPCVLLPLKTFSSGTR*RGEGQP
Trigger: TGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGA...GAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp CTCGAATTTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGCAGCAAACTTGGCACTaGAAGCCTTGTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LEFLPEFHVSFLVPFRNGQQTWH*KPCFPN
Trigger: GTTTGGGAAACAAGGCTTCCAGTGCCAAGTTTGCTG...CCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGGAAAGAACAATCCGATaGAAATCTCTGCCGCATAGA +
Preference number: 4 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTERTIR*KSLPHR
Trigger: TCTATGCGGCAGAGATTTCCATCGGATTGTTCTTTC...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAATGGGGTGCACAAACTaGGGGTTGACATACGAGAAC +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAMGCTN*GLTYEN
Trigger: GTTCTCGTATGTCAACCCCCAGTTTGTGCACCCCAT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGAAATTGTACCCAAAATaGGGCAACAGTCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPKLYPK*GNSLLA
Trigger: AGCAAGCAGACTGTTGCCCCATTTTGGGTACAATTT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCAAAGGAGGAGCACCTaGTCAGGACACGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCQRRST*SGHEPR
Trigger: TCTGGGTTCGTGTCCTGACCAGGTGCTCCTCCTTTG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTATCTGGGCAGGGGGACTaGCCCTTTTGTCTCCTAGGC +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVSGQGD*PFCLLG
Trigger: GCCTAGGAGACAAAAGGGCCAGTCCCCCTGCCCAGA...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAGCAGAGCCATTTGAATaGCCTGGTGTGGTCATAGCT +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAAEPFE*PGVVIA
Trigger: AGCTATGACCACACCAGGCCATTCAAATGGCTCTGC...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAAGAAAGCCTAATACGTaGCATCAGAAAGGGCAGACA +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGRKPNT*HQKGQT
Trigger: TGTCTGCCCTTTCTGATGCCACGTATTAGGCTTTCT...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGGCTTCCAGAGCTCTTaGCCCCATGGTTTTCTATCA +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTGFQSS*PHGFLS
Trigger: TGATAGAAAACCATGGGGCCAAGAGCTCTGGAAGCC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGTACACTGGATGGTCTaGCTCTGCCCAGAGAACTAT +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTVHWMV*LCPENY
Trigger: ATAGTTCTCTGGGCAGAGCCAGACCATCCAGTGTAC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGACACTCCTTGTCAAATTaGTGTGTGGCCACTAACAAC +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRHSLSN*CVATNN
Trigger: GTTGTTAGTGGCCACACACCAATTTGACAAGGAGTG...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGGTCCCAGAAACCCCTaGGAATCCTATTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCGPRNP*ESYSRA
Trigger: AGCCCTGGAATAGGATTCCCAGGGGTTTCTGGGACC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAATGACGCATTGCTTGTaGACGTTCATATCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAMTHCL*TFISQV
Trigger: CACCTGCGATATGAACGTTCACAAGCAATGCGTCAT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCCCCTGAAGACCTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGTCGTCGGTCTTTGTCTaGAGGTTTCAATTTGAATGT +
Preference number: 4 (lower is better)
Translates to: APEDLPVGQDAEVRDSHMSSVFV*RFQFEC
Trigger: ACATTCAAATTGAAACCTTCAGACAAAGACCGACGA...CATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAGGTCTTCAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR TCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGCTCTCTACAAGGACTaGCAGCTACTTTCATTCTGT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVALYKD*QLLSFC
Trigger: ACAGAATGAAAGTAGCTGTCAGTCCTTGTAGAGAGC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTCATGGTTATCTACATaGCAGTCTTCCAACAATAAC +
Preference number: 4 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRSWLST*QSSNNN
Trigger: GTTATTGTTGGAAGACTGTCATGTAGATAACCATGA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAAACCCAGCACCTGGTaGCCTTCAATTGAAATGCCA +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAKPSTW*PSIEMP
Trigger: TGGCATTTCAATTGAAGGTCACCAGGTGCTGGGTTT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATCAGTGTCTGTTTTGTaGTTACGATTGTCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGSVSVL*LRLSGV
Trigger: CACACCAGACAATCGTAATCACAAAACAGACACTGA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAGGAGACAGGAATGTTaGCCGTCCAGTGTATTTCAC +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLARRQEC*PSSVFH
Trigger: GTGAAATACACTGGACGGTCAACATTCCTGTCTCCT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGAATCCTTCATACTGTTaGCCTTCCCGAAGAATCCCT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVNPSYC*PSRRIP
Trigger: AGGGATTCTTCGGGAAGGTCAACAGTATGAAGGATT...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGTGGATTTTGAACTTGTaGTTGCTCCTGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVWILNL*LLLGSS
Trigger: TGATGACCCCAGGAGCAAGCACAAGTTCAAAATCCA...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAATGGGGCAACAGTCTaGTTGCTTTCTAGGAAGGGT +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLANGATV*LLSRKG
Trigger: ACCCTTCCTAGAAAGCAAGCAGACTGTTGCCCCATT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAACGTGGGGGTCTGTCCTaGTGCTGCTCCATTCTGGGC +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYERGGLS*CCSILG
Trigger: GCCCAGAATGGAGCAGCAGCAGGACAGACCCCCACG...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAGGCAGACAGTGGCCCTaGATGGACCACACGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEGRQWP*MDHTRP
Trigger: TGGCCTCGTGTGGTCCATGCAGGGCCACTGTCTGCC...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCTTTGGCTCCGAGAGGTaGTCAACAATCATTTGTTGG +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPFGSER*STIICW
Trigger: CCAACAAATGATTGTTGAGCACCTCTCGGAGCCAAA...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACAGCAAACTTGGCACTaGAAGCCTTGTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAQQTWH*KPCFPN
Trigger: GTTTGGGAAACAAGGCTTCCAGTGCCAAGTTTGCTG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGAAAGTAACAAATTCATaGCACCTCTTGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPKVTNS*HLLWTT
Trigger: TGTGGTCCACAAGAGGTGCCATGAATTTGTTACTTT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGGATGATCCTGACTCTCGTACTGTGACATaGAGCTTTTCATCAGCAACC +
Preference number: 4 (lower is better)
Translates to: LPVGQDAEVRDSHMDDPDSRTVT*SFSSAT
Trigger: GGTTGCTGATGAAAAGCTCCATGTCACAGTACGAGA...GTCAGGATCATCCATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp TTCTTGGTTAAGCAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAACTTGTACCATCCACTaGCCGGCATCTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: FLVKQLVPSTGRHLHQLRTCTIH*PASSSA
Trigger: AGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGT...TCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp GCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCACTTGTACCATCCACTaGCCGGCATCTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: ALLSGVMTAPCVLLPLKTTCTIH*PASSSA
Trigger: AGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGT...GGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp TTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCGTCCCCTTCCGGAATaGGTACGTTGTAGTACTCAC +
Preference number: 4 (lower is better)
Translates to: LLSGVMTAPCVLLPLKTFRPLPE*VRCSTH
Trigger: GTGAGTACTACAACGTACCCATTCCGGAAGGGGACG...GAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp CACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAACCAAGGCACATGGTTATCTaGTACATGTCACATCATAAG +
Preference number: 4 (lower is better)
Translates to: HANTSCTKTSGLALEAQPRHMVI*YMSHHK
Trigger: CTTATGATGTGACATGTACCAGATAACCATGTGCCT...TGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGACTTGGACAAGGATTTTaGATAGGAAACGTTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRLGQGF*IGNVVL
Trigger: GAGCACAACGTTTCCTATCCAAAATCCTTGTCCAAG...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGAAGTTTGTGCATGCTaGAGCAAACGACAGGTCGTT +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTEVCAC*SKRQVV
Trigger: AACGACCTGTCGTTTGCTCCAGCATGCACAAACTTC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCAATGCCACAATGGCTaGAAGAAAGTCCGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCQCHNG*KKVRSL
Trigger: GAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATTG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTCTGAGGACCTTGCATaGGGGTGTCTCACCAAAGCA +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCSEDLA*GCLTKA
Trigger: TGCTTTGGTGAGACACCCCCATGCAAGGTCCTCAGA...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGAACAATAACTGTCTTTaGCTGCTGAGATCTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPNNNCL*LLRSGK
Trigger: CTTTCCAGATCTCAGCAGCCAAAGACAGTTATTGTT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGATTGGAGGGCGGCCCCTaGCAGCACTCCAGTGACTTC +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRLEGGP*QHSSDF
Trigger: GAAGTCACTGGAGTGCTGCCAGGGGCCGCCCTCCAA...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGATGTTGTTAGCATTTaGGGGGTGTTTTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPDVVSI*GVFSEE
Trigger: CTCCTCAGAAAACACCCCCCAAATGCTAACAACATC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGTGTCAAATTGGTGTGTaGCCACTAACAACAGAGCAC +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVCQIGV*PLTTEH
Trigger: GTGCTCTGTTGTTAGTGGCCACACACCAATTTGACA...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAACACAAAATTTAGCTaGGTGTGGTGGCACGCACCT +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLANTKFS*VWWHAP
Trigger: AGGTGCGTGCCACCACACCCAGCTAAATTTTGTGTT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTGTAAGGCTGTTGGATaGCTGAGTGTGACCTCCACG +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCCKAVG*LSVTST
Trigger: CGTGGAGGTCACACTCAGCCATCCAACAGCCTTACA...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGAGCATGGGAAAATCTaGCAGTGGGAGATCAGGTCG +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCEHGKI*QWEIRS
Trigger: CGACCTGATCTCCCACTGCCAGATTTTCCCATGCTC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp ATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGTGGGACAAGATGAGCCTCCCAAGTAGCTaGGATTACAAGCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: MTAPCVLLPLKTFQWDKMSLPSS*DYKLSP
Trigger: TGGTGAGAGCTTGTAATCCCAGCTACTTGGGAGGCT...CATCTTGTCCCACTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR TCA 90 bp TTCTTGGTTAAGCAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGACGTAAGTGTGGATTTTaGACTTGTGCTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: FLVKQLVPSTGRHLHQLRRKCGF*TCACSW
Trigger: CCAGGAGCAAGCACAAGTTCAAAATCCACACTTACG...TCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp GACGTAAGTGAACTGAGTGAATCCTCCCAGCAGTCCTATGCGGCAGTCTCTATTCGTAAGTGTGGATTTTaGACTTGTGCTTGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: DVSELSESSQQSYAAVSIRKCGF*TCACSW
Trigger: CCAGGAGCAAGCACAAGTTCAAAATCCACACTTACG...AATAGAGACTGCCGCATAGGACTGCTGGGAGGATTCACTCAGTTCACTTACGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR TCA 90 bp TTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGATGACGCATTGCTTGTaGACGTTCATATCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSGVMTAPCVLLPLKTFQMTHCL*TFISQV
Trigger: CACCTGCGATATGAACGTTCACAAGCAATGCGTCAT...CTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACTTCACATAAGGATCTaGAAGCCCGTTTGGATCCAT +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLALHIRI*KPVWIH
Trigger: ATGGATCCAAACGGGCTTTCAGATCCTTATGTGAAG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GAAGACCTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGGATGATAGGAAAGGGATCCCATaGAGTCATTCCTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: EDLPVGQDAEVRDSHMDDRKGIP*SHSLLF
Trigger: GAACAACAAGGAATGACTTCATGGGATCCCTTTCCT...ATCATCCATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAGGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR TCA 90 bp CAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGATCTCGAATTTCTGCCTaGGTTCCATGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QLVPSTGRHLHQLRNSKGSRISA*VPCFLP
Trigger: AGGAAGGAAACATGGAACTCAGGCAGAAATTCGAGA...TCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGACCTTCTTCAGGATTTTaGTTGCATACAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRPSSGF*LHTVLL
Trigger: CAGAAGAACTGTATGCAATCAAAATCCTGAAGAAGG...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCTTCTGAATCCAACATaGCGTTATCTAACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: ALLPRLERPMPQWLEESPLLNPT*RYLTSD
Trigger: ATCTGAAGTTAGATAACGTCATGTTGGATTCAGAAG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTAGAAGGTCCTGGTCGTaGCTCCATCCATCATGTGTT +
Preference number: 4 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTRRSWS*LHPSCV
Trigger: AACACATGATGGATGGAGTCACGACCAGGACCTTCT...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCTGCTCCATGATAGACTaGAATAGCTCGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPCSMID*NSSSSS
Trigger: AGATGAAGACGAGCTATTTCAGTCTATCATGGAGCA...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCGGGCTGTCCTCGTGTaGAGAACTTGTCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCRAVLV*RTCQSS
Trigger: AGAACTTTGACAAGTTCTTCACACGAGGACAGCCCG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTTAGCAATAACCAGCTaGTCAGGTGGTGTTAAGACG +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTLAITS*SGGVKT
Trigger: CGTCTTAACACCACCTGATCAGCTGGTTATTGCTAA...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAATCCTTGATCTGAAATaGTTTCACACGCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRILDLK*FHTLVQ
Trigger: CTGAACAAGCGTGTGAAATCATTTCAGATCAAGGAT...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGGCTTATCCTTGATCTaGAATGATTTCACACGCTTG +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPGLSLI*NDFTRL
Trigger: CAAGCGTGTGAAATCATTTCAGATCAAGGATAAGCC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATCCCAGAGATTAAAATaGACATATGTACACACTGGC +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGSQRLK*TYVHTG
Trigger: GCCAGTGTGTACATATGTTCATTTTAATCTCTGGGA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGATACCATAGAATTTTATaGACTGATTCTGAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRYHRIL*TDSEAS
Trigger: GCTCGCCTCAGAATCAGTTCATAAAATTCTATGGTA...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAGATCGAAGTATTTCTaGGTTGCCCAGTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLARSKYF*VAQWAK
Trigger: TTTTGCCCACTGGGCAACTCAGAAATACTTCGATCT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGATGGTGTTTGACGGTTaGATGGCCTCTACATTTTGT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVMVFDG*MASTFC
Trigger: ACAAAATGTAGAGGCCATTCAACCGTCAAACACCAT...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGAAAGGACTCATTCCACTaGGGATTTAGTGTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRKDSFH*GFSVER
Trigger: CCGCTCCACACTAAATCCGCAGTGGAATGAGTCCTT...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp TTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCAAGGACTCATTCCACTaGGGATTTAGTGTGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LLSGVMTAPCVLLPLKTFKDSFH*GFSVER
Trigger: CCGCTCCACACTAAATCCGCAGTGGAATGAGTCCTT...GAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAACCTCTGAAAAGCACGTaGTGGTGCCTGCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEPLKST*WCLQGT
Trigger: CGTGCCCTGCAGGCACCAGCACGTGCTTTTCAGAGG...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGACCTTCTACTCAGGGTTaGCAGGACCACCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRPSTQG*QDHLGL
Trigger: GAGGCCCAGGTGGTCCTGGCAACCCTGAGTAGAAGG...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCAAGGAAGGGAAGCACTaGCGGAGCAATAATTTTGAC +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTKEGKH*RSNNFD
Trigger: GTCAAAATTATTGCTCCGGCAGTGCTTCCCTTCCTT...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCAAGGCATATTTCTGGATaGACCCAAACCCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLARHISG*TQTLFF
Trigger: GAAGAACAGGGTTTGGGTGCATCCAGAAATATGCCT...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp GAGCCTTCAGGAGGTATTCCAGAAGGCATTGTTATCAGGGGTGATGACAGCTCCCTCCACTCGAATTTCTaGCTGAGTTCCATGTTTCCT +
Preference number: 4 (lower is better)
Translates to: EPSGGIPEGIVIRGDDSSLHSNF*LSSMFP
Trigger: AGGAAACATGGAACTCAGGCAGAAATTCGAGTGGAG...GGAGCTGTCATCACCCCTGATAACAATGCCTTCTGGAATACCTCCTGAAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp GCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTGGCCTGGCAAACTTaGTGGGATTATAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: ALLSGVMTAPCVLLPLKTLAWQT*WDYRHE
Trigger: CTCATGCCTATAATCCCAGCAAGTTTGCCAGGCCAA...GGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp GGCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCAGCAAACTTGGCACTaGAAGCCTTGTTTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: GIVIRGDDSSMCITAPEDQQTWH*KPCFPN
Trigger: GTTTGGGAAACAAGGCTTCCAGTGCCAAGTTTGCTG...GTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCACAAAACAGCAAACTTaGCACTGGAAGCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPTKQQT*HWKPCF
Trigger: GAAACAAGGCTTCCAGTGCCAAGTTTGCTGTTTTGT...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTCTCGTACTGTGACATaGAGCTTTTCATCAGCAACC +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTSRTVT*SFSSAT
Trigger: GGTTGCTGATGAAAAGCTCCATGTCACAGTACGAGA...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp GAAGACCTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGGATGATACTGCGGATTTAGTGTaGAGCGGATGGTTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: EDLPVGQDAEVRDSHMDDTADLV*SGWFWF
Trigger: AAACCAAAACCATCCGCTCCACACTAAATCCGCAGT...ATCATCCATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAGGTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCAGCAGGGCCAAGTTTaGCTTTCTCGAATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCQQGQV*LSRISA
Trigger: GGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGACTCGGTCAAGGTTGTTaGAAGGTTGTTTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QLVPSTGRHLHQLRNSKGLGQGC*KVVSCL
Trigger: AAGACAGGAAACAACCTTCCAACAACCTTGACCGAG...TCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGAGTCTCGATGTCTATaGTGCATAAAAGATGGCAGA +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPESRCL*CIKDGR
Trigger: TCTGCCATCTTTTATGCACCATAGACATCGAGACTC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAACCAACCACCTCCGATaGGAAGCCGTTGACGGTGGC +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYETNHLR*EAVDGG
Trigger: GCCACCGTCAACGGCTTCCCATCGGAGGTGGTTGGT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp TTCCGGAATGGGTACGTTGTAGTACTCACCTTCTTCTaGGTTAAGCAACTTGTACCATCCACTGGCCGGCAT +
Preference number: 4 (lower is better)
Translates to: FRNGYVVVLTFF*VKQLVPSTGRH
Trigger: ATGCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGAAGAAGGTGAGTACTACAACGTACCCATTCCGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR CAA 72 bp TCTCTTGGCTTCCTGTTCTTGGATTCCAAAGACGTCTaGGGTGGAGATGTTTCCTGGGACAGGCTCACTTTA +
Preference number: 4 (lower is better)
Translates to: SLGFLFLDSKDV*GGDVSWDRLTL
Trigger: TAAAGTGAGCCTGTCCCAGGAAACATCTCCACCCAAGACGTCTTTGGAATCCAAGAACAGGAAGCCAAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp ACGTCAATAGGCACGTTTGCTGCTGCCTCTTATATCTaGGGAGATCGAAGTATTTCTGAGTTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: TSIGTFAAASYI*GDRSISELPSG
Trigger: CCCACTGGGCAACTCAGAAATACTTCGATCTCCCAAGATATAAGAGGCAGCAGCAAACGTGCCTATTGACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTATGACGCATTGCTTGTaGACGTTCATATCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTMTHCL*TFISQV
Trigger: CACCTGCGATATGAACGTTCACAAGCAATGCGTCAT...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp TTCTTGGTTAAGCAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGATTGCATCTCGTACTGTaGCATGGAGCTTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: FLVKQLVPSTGRHLHQLRLHLVL*HGAFHQ
Trigger: CTGATGAAAAGCTCCATGTCACAGTACGAGATGCAA...TCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp ATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGTGGGACAAGATGTTGCATCTCGTACTGTaGCATGGAGCTTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: MTAPCVLLPLKTFQWDKMLHLVL*HGAFHQ
Trigger: CTGATGAAAAGCTCCATGTCACAGTACGAGATGCAA...CATCTTGTCCCACTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR TCA 90 bp GGCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCACATAAGGATCTaGAAGCCCGTTTGGATCCAT +
Preference number: 4 (lower is better)
Translates to: GIVIRGDDSSMCITAPEDLHIRI*KPVWIH
Trigger: ATGGATCCAAACGGGCTTTCAGATCCTTATGTGAAG...GTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR TCA 90 bp TTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTACGTTGTCGTCGGTCTTTGTCTaGAGGTTTCAATTTGAATGT +
Preference number: 4 (lower is better)
Translates to: FCLSSMFPSSSPSGMGTLSSVFV*RFQFEC
Trigger: ACATTCAAATTGAAACCTTCAGACAAAGACCGACGA...CAACGTACCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGTCGTCGGTCTTTGTCTaGAGGTTTCAATTTGAATGT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVSSVFV*RFQFEC
Trigger: ACATTCAAATTGAAACCTTCAGACAAAGACCGACGA...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATTTGATATGTCCTTCTaGATCCAACATGACGTTATC +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGFDMSF*IQHDVI
Trigger: GATAACGTCATGTTGGATTCAGAAGGACATATCAAA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGACAAAGTCAGCAATTTTaGTATGTCCTTCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGQSQQF*YVLLNP
Trigger: TGGATTCAGAAGGACATATCAAAATTGCTGACTTTG...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAAAAGTCCGCAGCCTCTaGAAAGCACGTGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEKVRSL*KARAGA
Trigger: GGCACCAGCACGTGCTTTTCAGAGGCTGCGGACTTT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAAAAGCAGGTTCCACATaGCAACACTGCACCGGGCCC +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEKAGST*QHCTGP
Trigger: GGGCCCGGTGCAGTGTTGTCATGTGGAACCTGCTTT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGAAACAGGAAATGGTGTaGTGTGCACACACAAGAAAT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVKQEMV*CAHTRN
Trigger: ATTTCTTGTGTGTGCACATCACACCATTTCCTGTTT...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAAATCTTCACCCAAGGTaGGAGACCTGGGGACCAGGC +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRNLHPR*ETWGPG
Trigger: GCCTGGTCCCCAGGTCTCTCACCTTGGGTGAAGATT...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCTTGACACCTATTTTCTaGAAAGCCGAGTTCTGTCTA +
Preference number: 4 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPLTPIF*KAEFCL
Trigger: TAGACAGAACTCGGCTTTTCAGAAAATAGGTGTCAA...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCACTCGAATTTCTGCCTaGGTTCCATGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ALLSGVMTAPCVLLPLKTTRISA*VPCFLP
Trigger: AGGAAGGAAACATGGAACTCAGGCAGAAATTCGAGT...GGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp AACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAAAAACTTAGAGGCCACTaGTGTCATCAACGTGCACAT +
Preference number: 4 (lower is better)
Translates to: NLYHPLAGIFISSETPKEKLRGH*CHQRAH
Trigger: ATGTGCACGTTGATGACAGCAGTGGCCTCTAAGTTT...TTCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTGGGCAACAGTCTGCTTaGTTTCTAGGAAGGGTTAAC +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCGQQSA*FLGRVN
Trigger: GTTAACCCTTCCTAGAAAGCAAGCAGACTGTTGCCC...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAATGTGGGTGTTGGGGTTaGAGGGAAGGCCTAAGCCTG +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYECGCWG*REGLSL
Trigger: CAGGCTTAGGCCTTCCCTGCAACCCCAACACCCACA...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGTCATGGCACCTCTTGTaGACCACAAAACAGCAAACT +
Preference number: 4 (lower is better)
Translates to: LSGVMTAPCVLLPLKTFQSWHLL*TTKQQT
Trigger: AGTTTGCTGTTTTGTGGTCCACAAGAGGTGCCATGA...CTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp AACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAATCTCGTACTGTGACATaGAGCTTTTCATCAGCAACC +
Preference number: 4 (lower is better)
Translates to: NLYHPLAGIFISSETPKESRTVT*SFSSAT
Trigger: GGTTGCTGATGAAAAGCTCCATGTCACAGTACGAGA...TTCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGAAAGAACAATCCGATaGAAATCTCTGCCGCATAGA +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTERTIR*KSLPHR
Trigger: TCTATGCGGCAGAGATTTCCATCGGATTGTTCTTTC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTTCTACCATGGTGCACATAAGCGATTATCTCTaGGGCGATATAATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: KNGGLSSRAKTRFSTMVHISDYL*GDIIWS
Trigger: ACTCCAGATTATATCGCCCCAGAGATAATCGCTTAT...GTGCACCATGGTAGAAAAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp GATGACTTTGTTGCCAGCAGGGCCAAGTTTGGCTTTCTCGAATTTCTGCCTGAGACTAATTACACACATTaGCAGCAGCTGGGGCAATCT +
Preference number: 4 (lower is better)
Translates to: DDFVASRAKFGFLEFLPETNYTH*QQLGQS
Trigger: AGATTGCCCCAGCTGCTGCCAATGTGTGTAATTAGT...CTCAGGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTGGCAACAAAGTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp CTCGAATTTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGGATGTTCAGCCTCACTaGACTTCAGTGAAAATTACA +
Preference number: 4 (lower is better)
Translates to: LEFLPEFHVSFLVPFRNGDVQPH*TSVKIT
Trigger: TGTAATTTTCACTGAAGTCCAGTGAGGCTGAACATC...CCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGTCTACAGAATTAAACTaGACACTGAGCATGACGTAC +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVSTELN*TLSMTY
Trigger: GTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGA...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGTTTAACATCTCTGGTTaGGGGATTCCAATGCTGAAA +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVFNISG*GIPMLK
Trigger: TTTCAGCATTGGAATCCCCCAACCAGAGATGTTAAA...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGTTCAACACTCAGCAATaGATAAAGCAGGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVFNTQQ*IKQVPH
Trigger: ATGTGGAACCTGCTTTATCCATTGCTGAGTGTTGAA...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTTGGCTGCTGAGATCTaGAAAGCCCTAACCATTACC +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCLAAEI*KALTIT
Trigger: GGTAATGGTTAGGGCTTTCCAGATCTCAGCAGCCAA...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAAGCCAGAGAGGAAAATaGGCAGGAACCTACTGGCCT +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVSQRGK*AGTYWP
Trigger: AGGCCAGTAGGTTCCTGCCCATTTTCCTCTCTGGCT...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTTGCATCTCGTACTGTaGCATGGAGCTTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCLHLVL*HGAFHQ
Trigger: CTGATGAAAAGCTCCATGTCACAGTACGAGATGCAA...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAACACACACTTTGGGCTTaGATGGTGGCTGGATCTCCC +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEHTLWA*MVAGSP
Trigger: GGGAGATCCAGCCACCATTCAAGCCCAAAGTGTGTG...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAAAGGAGGGTACCAGATaGCAGATTCACCCAACACTC +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVKEGTR*QIHPTL
Trigger: GAGTGTTGGGTGAATCTGTCATCTGGTACCCTCCTT...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTCTCGATGTCTATGGTaGATAAAAGATGGCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTSRCLW*IKDGRR
Trigger: TCTTCTGCCATCTTTTATGCACCATAGACATCGAGA...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTATGGATGGTCTGGCTCTaGCCAGAGAACTATGAGCTA +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVWMVWL*PENYEL
Trigger: TAGCTCATAGTTCTCTGGGCAGAGCCAGACCATCCA...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGACGCGCGATGAATTTGTaGTCCTTCACCTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRRAMNL*SFTSCT
Trigger: CGTGCACGAGGTGAAGGACCACAAATTCATCGCGCG...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGACAAAACAGCAAACTTaGCACTGGAAGCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LSGVMTAPCVLLPLKTFQTKQQT*HWKPCF
Trigger: GAAACAAGGCTTCCAGTGCCAAGTTTGCTGTTTTGT...CTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp CAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAAAAGTAACAAATTCATaGCACCTCTTGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: QLVPSTGRHLHQLRNSKGKVTNS*HLLWTT
Trigger: TGTGGTCCACAAGAGGTGCCATGAATTTGTTACTTT...TCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAACTTGTGCTTGCTCCTaGGGTCATCAGTGTCGGGTC +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRTCACS*GHQCRV
Trigger: GACCCGACACTGATGACCCCAGGAGCAAGCACAAGT...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAGCTTGGCTGGGTGTTTaGTCATCAGTCCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVAWLGV*SSVLCR
Trigger: TCTGCAAAGGACTGATGACCAAACACCCAGCCAAGC...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTATTTGGGCTTGAATGGTaGCTGGATCTCCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVFGLEW*LDLPVL
Trigger: GAGAACAGGGAGATCCAGCCACCATTCAAGCCCAAA...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTTTGGCTTCCTGTTCTTaGATTCCAAAGACGTCTTGG +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCLASCS*IPKTSW
Trigger: CCAAGACGTCTTTGGAATCCAAGAACAGGAAGCCAA...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCTGCTGGACCATGGTTaGGTTAGGATTTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCLLDHG*VRICQC
Trigger: ACATTGACAAATCCTAACCCAACCATGGTCCAGCAG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAGAACCTACTGGCCTCTaGGGTACACTGGATGGTCTG +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLREPTGL*GTLDGL
Trigger: CAGACCATCCAGTGTACCCCAGAGGCCAGTAGGTTC...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTGTTTGACGGTTGAATaGCCTCTACATTTTGTCAGT +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTCLTVE*PLHFVS
Trigger: ACTGACAAAATGTAGAGGCCATTCAACCGTCAAACA...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp AGGAAATTGAAGTCCGTGAGTTTCACTCGGTCAAGGTaGTTGGAAGGTTGTTTCCTGTCTTCAGAGGGACTG +
Preference number: 4 (lower is better)
Translates to: RKLKSVSFTRSR*LEGCFLSSEGL
Trigger: CAGTCCCTCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGACTTCAATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR CAA 72 bp GCCTCTTATATCTTGGGAGATCGAAGTATTTCTGAGTaGCCCAGTGGGCAAAATCCTTACAGGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: ASYILGDRSISE*PSGQNPYRASL
Trigger: CAGAGATGCCCTGTAAGGATTTTGCCCACTGGGCAACTCAGAAATACTTCGATCTCCCAAGATATAAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GATGACTTTGTTGCCAGCAGGGCCAAGTTTGGCTTTCTCGAATTTCTGCCTGAGCCTTCTTCAGGATTTTaGTTGCATACAGTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: DDFVASRAKFGFLEFLPEPSSGF*LHTVLL
Trigger: CAGAAGAACTGTATGCAATCAAAATCCTGAAGAAGG...CTCAGGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTGGCAACAAAGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGACCAGTTTTAAGATACTaGAAACTTAGAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRPVLRY*KLRGHC
Trigger: GCAGTGGCCTCTAAGTTTTCAGTATCTTAAAACTGG...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTCTTTGCAGACAAACTTaGAGGGAACCATATAACCCA +
Preference number: 4 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTLCRQT*REPYNP
Trigger: TGGGTTATATGGTTCCCTGCAAGTTTGTCTGCAAAG...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp GGAGGTATTCCAGAAGGCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTTGGATTTTGAACTTGTaGTTGCTCCTGGGGTCATCA +
Preference number: 4 (lower is better)
Translates to: GGIPEGIVIRGDDSSMCIWILNL*LLLGSS
Trigger: TGATGACCCCAGGAGCAAGCACAAGTTCAAAATCCA...AATACACATGGAGCTGTCATCACCCCTGATAACAATGCCTTCTGGAATACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR GCA 90 bp GCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCAAGCTCTCACCACCATaGCTGGCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: ALLSGVMTAPCVLLPLKTKLSPP*LANFCI
Trigger: AATACAAAAATTAGCCAGGCATGGTGGTGAGAGCTT...GGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTACAAAACAGCAAACTTaGCACTGGAAGCCTTGTTTC +
Preference number: 4 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTTKQQT*HWKPCF
Trigger: GAAACAAGGCTTCCAGTGCCAAGTTTGCTGTTTTGT...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CCA 90 bp TTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGAAAGTAACAAATTCATaGCACCTCTTGTGGACCACA +
Preference number: 4 (lower is better)
Translates to: LSGVMTAPCVLLPLKTFQKVTNS*HLLWTT
Trigger: TGTGGTCCACAAGAGGTGCCATGAATTTGTTACTTT...CTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGACTGCACTCTGTAAGATaGGGTGCACAAACTGGGGGT +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRLHSVR*GAQTGG
Trigger: ACCCCCAGTTTGTGCACCCCATCTTACAGAGTGCAG...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCTTTTTATCCCTAAGTaGACATCCAGGGCTAGAGAA +
Preference number: 4 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCLFIPK*TSRARE
Trigger: TTCTCTAGCCCTGGATGTCCACTTAGGGATAAAAAG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAATGTCTCCTGCTAAGTaGAACCCAGGTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEMSPAK*NPGGNC
Trigger: GCAGTTCCCACCTGGGTTCCACTTAGCAGGAGACAT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGTCCTCCAAACAAAGTTaGGGCTTATATGATGTTTTT +
Preference number: 4 (lower is better)
Translates to: NATMAGRKSAASEKHVLVSSKQS*GLYDVF
Trigger: AAAAACATCATATAAGCCCCAACTTTGTTTGGAGGA...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp AAATTGAAGTCCGTGAGTTTCACTCGGTCAAGGTTGTaGGAAGGTTGTTTCCTGTCTTCAGAGGGACTGATG +
Preference number: 4 (lower is better)
Translates to: KLKSVSFTRSRL*EGCFLSSEGLM
Trigger: CATCAGTCCCTCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGACTTCAATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
3UTR CAA 72 bp CACATCCGTCTCCTCTGCGATATAACCAAATGGTGTTaGACGGTTGAATGGCCTCTACATTTTGTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: HIRLLCDITKWC*TVEWPLHFVSR
Trigger: CCTACTGACAAAATGTAGAGGCCATTCAACCGTCAAACACCATTTGGTTATATCGCAGAGGAGACGGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp GATGACTTTGTTGCCAGCAGGGCCAAGTTTGGCTTTCTCGAATTTCTGCCTGAGCAAAGTCAGCAATTTTaGTATGTCCTTCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: DDFVASRAKFGFLEFLPEQSQQF*YVLLNP
Trigger: TGGATTCAGAAGGACATATCAAAATTGCTGACTTTG...CTCAGGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTGGCAACAAAGTCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAACTTACAGGGCATCTCTaGATCTTCACCCAAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYELTGHL*IFTQGE
Trigger: CTCACCTTGGGTGAAGATTCAGAGATGCCCTGTAAG...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGACATACAGTTCTTCTGTaGCCTTCCTGTCGGCAAGCA +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRHTVLL*PSCRQA
Trigger: TGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATG...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCATTAGAAACAAGAACCTaGACAAATAGAGCACAATTG +
Preference number: 4 (lower is better)
Translates to: LQSFPRGLHTLGAWENLALETRT*TNRAQL
Trigger: CAATTGTGCTCTATTTGTGCAGGTTCTTGTTTCTAA...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAACTTGTACCATCCACTaGCCGGCATCTTCATCAGCT +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRTCTIH*PASSSA
Trigger: AGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGT...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp TTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGTACTCACCTTCTTCTTaGTTAAGCAACTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: LSGVMTAPCVLLPLKTFQYSPSS*LSNLYH
Trigger: ATGGTACAAGTTGCTTAACCAAGAAGAAGGTGAGTA...CTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTACTCGGTCAAGGTTGTTaGAAGGTTGTTTCCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVLGQGC*KVVSCL
Trigger: AAGACAGGAAACAACCTTCCAACAACCTTGACCGAG...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAATCTTCACCATCAAATaGAGGCTGCCCGGCAAGCAT +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRIFTIK*RLPGKH
Trigger: ATGCTTGCCGGGCAGCCTCCATTTGATGGTGAAGAT...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCCACAGATGGAGGGTATaGAAAGTATATCAAATTGTA +
Preference number: 4 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTHRWRV*KVYQIV
Trigger: TACAATTTGATATACTTTCCATACCCTCCATCTGTG...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGATTCCAGGGCTGCCTCTaGATGGGGGACACTAAAAAT +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRFQGCL*MGDTKN
Trigger: ATTTTTAGTGTCCCCCATCCAGAGGCAGCCCTGGAA...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp TCCCGAAGAATCCCTGACACTACGGAATTAACACAATaGTGGTTGACCCCATTTCTAGATGATGGCCTTCAT +
Preference number: 4 (lower is better)
Translates to: SRRIPDTTELTQ*WLTPFLDDGLH
Trigger: ATGAAGGCCATCATCTAGAAATGGGGTCAACCACAATTGTGTTAATTCCGTAGTGTCAGGGATTCTTCGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTCTTCTGAATCCAACATaGCGTTATCTAACTTCAGAT +
Preference number: 4 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTLLNPT*RYLTSD
Trigger: ATCTGAAGTTAGATAACGTCATGTTGGATTCAGAAG...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR TCA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGATTTGATATGTCCTTCTaGATCCAACATGACGTTATC +
Preference number: 4 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRFDMSF*IQHDVI
Trigger: GATAACGTCATGTTGGATTCAGAAGGACATATCAAA...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAATCTATCTGATACAGTaGCCATGTGCAGGGAGGGAA +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEIYLIQ*PCAGRE
Trigger: TTCCCTCCCTGCACATGGGCACTGTATCAGATAGAT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp AGAATCCCTGACACTACGGAATTAACACAATTGTGGTaGACCCCATTTCTAGATGATGGCCTTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: RIPDTTELTQLW*TPFLDDGLHPC
Trigger: ACATGGATGAAGGCCATCATCTAGAAATGGGGTCAACCACAATTGTGTTAATTCCGTAGTGTCAGGGATTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAAGGAAAGGGATCCCATaGAGTCATTCCTTGTTGTTC +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYERKGIP*SHSLLF
Trigger: GAACAACAAGGAATGACTTCATGGGATCCCTTTCCT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGATCTCGAATTTCTGCCTaGGTTCCATGTTTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRSRISA*VPCFLP
Trigger: AGGAAGGAAACATGGAACTCAGGCAGAAATTCGAGA...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTATTATTAACTGTCACCTaGTCACATAAATGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SVEADARVSTSIKLLYIVLLTVT*SHKWEA
Trigger: TGCCTCCCATTTATGTGATCAGGTGACAGTTAATAA...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGACCATTCATCCTCAGCTaGCATAATTCTTGGCAGGAA +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRPFILS*HNSWQE
Trigger: TTCCTGCCAAGAATTATGGCAGCTGAGGATGAATGG...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAAATAGGCACGTTTGCTaGTGCCTCTTATATCTTGGG +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYENRHVC*CLLYLG
Trigger: CCCAAGATATAAGAGGCAGCAGCAAACGTGCCTATT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
3UTR CAA 72 bp TTTCCTGTGGTTTGGAAGTTTCTAAACCTTAAGCAGTaGTCCCCAGTGTCTATTAAAAACTCGCAGAGCATC +
Preference number: 4 (lower is better)
Translates to: FPVVWKFLNLKQ*SPVSIKNSQSI
Trigger: GATGCTCTGCGAGTTTTTAATAGACACTGGGGACAACTGCTTAAGGTTTAGAAACTTCCAAACCACAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR TCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGATTAACAAAACATCTTTaGGCTGTTAGGCATCCGGGT +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRLTKHL*AVRHPG
Trigger: ACCCGGATGCCTAACAGCTCAAAGATGTTTTGTTAA...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAAATCATTTGTTGGGCTaGATGAACCTTGGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRNHLLG*MNLGLS
Trigger: GGAAAGACCAAGGTTCATGCAGCCCAACAAATGATT...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAGAAGTATTTCTGAGTTaGCCAGTGGGCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEEVFLS*PVGKIL
Trigger: AAGGATTTTGCCCACTGGGCAACTCAGAAATACTTC...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAGTCAATAGGCACGTTTaGTGCTGCCTCTTATATCTT +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRVNRHV*CCLLYL
Trigger: AAGATATAAGAGGCAGCAGCAAACGTGCCTATTGAC...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAAAAATGACTGTCAGATaGTATCACCTTTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEKMTVR*YHLSEA
Trigger: AGCCTCGGAAAGGTGATACCATCTGACAGTCATTTT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAATAAGCGATTATCTCTaGGGCGATATAATCTGGAGT +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEISDYL*GDIIWS
Trigger: ACTCCAGATTATATCGCCCCAGAGATAATCGCTTAT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAATGCGATATAACCAAATaGTGTTTGACGGTTGAATGG +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYECDITK*CLTVEW
Trigger: CCATTCAACCGTCAAACACCATTTGGTTATATCGCA...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CCA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAATACTCACCTTCTTCTTaGTTAAGCAACTTGTACCAT +
Preference number: 4 (lower is better)
Translates to: HLISHNTHEGASTIEFYEYSPSS*LSNLYH
Trigger: ATGGTACAAGTTGCTTAACCAAGAAGAAGGTGAGTA...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR GCA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGACCCAGTATATTCAGTTaGTCTACTGGAATTAACAAA +
Preference number: 4 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRPSIFS*STGINK
Trigger: TTTGTTAATTCCAGTAGAGCAACTGAATATACTGGG...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CTCGAATTTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTGCCTCAGCGCCCCTTaGCGGGCGAAGCGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LEFLPEFHVSFLVPFRNGCLSAP*RAKRLA
Trigger: GGCCAACCGCTTCGCCCGCAAAGGGGCGCTGAGGCA...CCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGACGCAGTCGGTATTTaGAGGCCTCCCCCACCCCCA +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRDAVGI*RPPPPP
Trigger: TGGGGGTGGGGGAGGCCTCAAAATACCGACTGCGTC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTCCGATGGGAAGCCGTaGACGGTGGCACCCCTTCCT +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRSDGKP*TVAPLP
Trigger: AGGAAGGGGTGCCACCGTCAACGGCTTCCCATCGGA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTGCCTCAGCGCCCCTTaGCGGGCGAAGCGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTCLSAP*RAKRLA
Trigger: GGCCAACCGCTTCGCCCGCAAAGGGGCGCTGAGGCA...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GAAGACCTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGGATGATTGCCTCAGCGCCCCTTaGCGGGCGAAGCGGTTGGCC +
Preference number: 5 (lower is better)
Translates to: EDLPVGQDAEVRDSHMDDCLSAP*RAKRLA
Trigger: GGCCAACCGCTTCGCCCGCAAAGGGGCGCTGAGGCA...ATCATCCATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAGGTCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGACGCCGTGGAGTCGTaGCCCGGGAAAACGTCAGCC +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGDAVES*PGKTSA
Trigger: GGCTGACGTTTTCCCGGGCAACGACTCCACGGCGTC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCGGCCTCTCATTAACCTaGGAGGGCGGCCCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPGLSLT*EGGPWQ
Trigger: CTGCCAGGGGCCGCCCTCCAAGGTTAATGAGAGGCC...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGTGGGACAAGACGCCGTGGAGTCGTaGCCCGGGAAAACGTCAGCC +
Preference number: 5 (lower is better)
Translates to: GDDSSMCITAPEDLPVGQDAVES*PGKTSA
Trigger: GGCTGACGTTTTCCCGGGCAACGACTCCACGGCGTC...TTGTCCCACTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGTGTGGGGGTGGGTGTaGGTGAACAACACTGGTGAG +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPVWGWV*VNNTGE
Trigger: CTCACCAGTGTTGTTCACCAACACCCACCCCCACAC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTACTCGCCTAAGGACTTaGGCTCCGAGAGGTGCTCAA +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRTRLRT*APRGAQ
Trigger: TTGAGCACCTCTCGGAGCCAAAGTCCTTAGGCGAGT...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGAAGCGCGCGATGAATTaGTGGTCCTTCACCTCGTGC +
Preference number: 5 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTKRAMN*WSFTSC
Trigger: GCACGAGGTGAAGGACCACAAATTCATCGCGCGCTT...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GGAGTGCAGCTGCGTCAAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTTGGCACTGGAAGCCTaGTTTCCCAAACCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: GVQLRQERGFVKQGQDSLLALEA*FPKPPD
Trigger: ATCTGGGGGTTTGGGAAACAAGGCTTCCAGTGCCAA...AAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTTGACGCAGCTGCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGGAGGGACTGATGACTTaGTTGCCAGCAGGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTEGLMT*LPAGPS
Trigger: ACTTGGCCCTGCTGGCAACAAAGTCATCAGTCCCTC...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp CACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAACCACTAAAACGTCAGGTCTaGCTCTCGAGGCCCAACCAG +
Preference number: 5 (lower is better)
Translates to: HANTSCTKTSGLALEAQPLKRQV*LSRPNQ
Trigger: CTGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAG...TGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCCTTTGCCACACACTTaGGGCTTGAATGGTGGCTGG +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPPLPHT*GLNGGW
Trigger: CCAGCCACCATTCAAGCCCAAAGTGTGTGGCAAAGG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCCTGGTGACCTTCAATaGAAATGCCAAGAGACGGGC +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRPGDLQ*KCQETG
Trigger: GCCCGTCTCTTGGCATTTCAATTGAAGGTCACCAGG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAGAGGGACTGATGACTTaGTTGCCAGCAGGGCCAAGT +
Preference number: 5 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIREGLMT*LPAGPS
Trigger: ACTTGGCCCTGCTGGCAACAAAGTCATCAGTCCCTC...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGTGTGGATTTTGAACTaGTGCTTGCTCCTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRVWILN*CLLLGS
Trigger: TGACCCCAGGAGCAAGCACAAGTTCAAAATCCACAC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTTCCCTGCTCACTCTCTaGGCTTCCTGTTCTTGGATT +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRSLLTL*ASCSWI
Trigger: AATCCAAGAACAGGAAGCCAAGAGAGTGAGCAGGGA...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGCTACTCTGAGGACCTaGCATGGGGGTGTCTCACCA +
Preference number: 5 (lower is better)
Translates to: NATMAGRKSAASEKHVLVATLRT*HGGVSP
Trigger: TGGTGAGACACCCCCATGCAAGGTCCTCAGAGTAGC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCATCCTTCTACTCAGGGTaGCCAGGACCACCTGGGCCT +
Preference number: 5 (lower is better)
Translates to: LQSFPRGLHTLGAWENLASFYSG*PGPPGP
Trigger: AGGCCCAGGTGGTCCTGGCAACCCTGAGTAGAAGGA...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGGACTGATGACTTTGTaGCCAGCAGGGCCAAGTTTG +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGGLMTL*PAGPSL
Trigger: CAAACTTGGCCCTGCTGGCAACAAAGTCATCAGTCC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTATTTTGAACTTGTGCTaGCTCCTGGGGTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRILNLC*LLGSSV
Trigger: CACTGATGACCCCAGGAGCAAGCACAAGTTCAAAAT...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCCACACACTTTGGGCTaGAATGGTGGCTGGATCTCC +
Preference number: 5 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPPHTLG*NGGWIS
Trigger: GGAGATCCAGCCACCATTCAAGCCCAAAGTGTGTGG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGTGGCAAAACACTCTCTaGAGGGCCAGCAGACAGAAA +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPWQNTL*RASRQK
Trigger: TTTCTGTCTGCTGGCCCTCAAGAGAGTGTTTTGCCA...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp AAGAACGGGGGTTTGTCAAGCAGGGCCAAGACTCGCTTTTCTACCATGGTGCACGTGTGGATTTTGAACTaGTGCTTGCTCCTGGGGTCC +
Preference number: 5 (lower is better)
Translates to: KNGGLSSRAKTRFSTMVHVWILN*CLLLGS
Trigger: GGACCCCAGGAGCAAGCACAAGTTCAAAATCCACAC...GTGCACCATGGTAGAAAAGCGAGTCTTGGCCCTGCTTGACAAACCCCCGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGACTCGGTCAAGGTTGTaGGAAGGTTGTTTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPTRSRL*EGCFLS
Trigger: AGACAGGAAACAACCTTCCAACAACCTTGACCGAGT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCGTCAAGAACGGGGGTTaGTCAAGCAGGGCCAAGACT +
Preference number: 5 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTVKNGG*SSRAKT
Trigger: AGTCTTGGCCCTGCTTGACAAACCCCCGTTCTTGAC...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAACCATCCATCATGTGTTCCTaGCACATCCCAAAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: HANTSCTKTSGLALEAQPSIMCS*HIPKSA
Trigger: TGCTGACTTTGGGATGTGCAAGGAACACATGATGGA...TGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGATTGGTCATCAGTCCTTaGCAGACAGAAACAGCCTCC +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGLVISP*QTETAS
Trigger: GGAGGCTGTTTCTGTCTGCAAAGGACTGATGACCAA...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGATTCCAAAGACGTCTaGGGTGGAGATGTTTCCTGG +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGDSKDV*GGDVSW
Trigger: CCAGGAAACATCTCCACCCAAGACGTCTTTGGAATC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGTGCTGCGGCAATGCCACGTGTGTACCAACGTACTAGGCAGACTGGAATCAGAATCAGACACTTCCTGTaGTCCCCAAGAGGAAGAGTG +
Preference number: 5 (lower is better)
Translates to: GAAAMPRVYQRTRQTGIRIRHFL*SPRGRV
Trigger: CACTCTTCCTCTTGGGGACAACAGGAAGTGTCTGAT...TCTGATTCCAGTCTGCCTAGTACGTTGGTACACACGTGGCATTGCCGCAGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGAGGAGACAGGAATGTaGACCGTCCAGTGTATTTCA +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPEETGM*TVQCIS
Trigger: TGAAATACACTGGACGGTCAACATTCCTGTCTCCTC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAAAGTTCCACCTGAACTaGCAGTCATTCCCACGTGGA +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGKFHLN*QSFPRG
Trigger: TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTT...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGCGAAGTATTTCTGAGTaGCCCAGTGGGCAAAATCCT +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPRSISE*PSGQNP
Trigger: AGGATTTTGCCCACTGGGCAACTCAGAAATACTTCG...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS CCA 90 bp AAGTTCTCTGCTCCTTTGCCACACACTTTGGGCTTGAATGGTGGCTaGATCTCCCTGTTCTCCAGTTTTTCCCAGTCGATCCTCCGGAAG +
Preference number: 5 (lower is better)
Translates to: KFSAPLPHTLGLNGG*ISLFSSFSQSILRK
Trigger: CTTCCGGAGGATCGACTGGGAAAAACTGGAGAACAGGGAGATCCAGCCACCATTCAAGCCCAAAGTGTGTGGCAAAGGAGCAGAGAACTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTGACATTGATGACGCATaGCTTGTGAACGTTCATATC +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRDIDDA*LVNVHI
Trigger: GATATGAACGTTCACAAGCAATGCGTCATCAATGTC...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTCTTGGTTAAGCAACTaGTACCATCCACTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTSWLSN*YHPLAG
Trigger: GCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGA...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GAAGACCTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGGATGATTCTTGGTTAAGCAACTaGTACCATCCACTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: EDLPVGQDAEVRDSHMDDSWLSN*YHPLAG
Trigger: GCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGA...ATCATCCATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAGGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCACCAGCAGGGCCAAGTTaGGCTTTCTCGAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: LQSFPRGLHTLGAWENLAPAGPS*AFSNFC
Trigger: GCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTGG...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAGGACTGATGACTTTGTaGCCAGCAGGGCCAAGTTTG +
Preference number: 5 (lower is better)
Translates to: QLVPSTGRHLHQLRNSKGGLMTL*PAGPSL
Trigger: CAAACTTGGCCCTGCTGGCAACAAAGTCATCAGTCC...TCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp AACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAAGTCAAGAACGGGGGTTaGTCAAGCAGGGCCAAGACT +
Preference number: 5 (lower is better)
Translates to: NLYHPLAGIFISSETPKEVKNGG*SSRAKT
Trigger: AGTCTTGGCCCTGCTTGACAAACCCCCGTTCTTGAC...TTCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCACCGGGCCCTGATTTaGACTGTTTCTCTCTGGGGG +
Preference number: 5 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCHRALI*TVSLWG
Trigger: CCCCCAGAGAGAAACAGTCAAAATCAGGGCCCGGTG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGAATCCTTCATACTGTaGACCTTCCCGAAGAATCCC +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGESFIL*TFPKNP
Trigger: GGGATTCTTCGGGAAGGTCAACAGTATGAAGGATTC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTAAGCGCGCGATGAATTaGTGGTCCTTCACCTCGTGC +
Preference number: 5 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCKRAMN*WSFTSC
Trigger: GCACGAGGTGAAGGACCACAAATTCATCGCGCGCTT...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp ATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGTGGGACAAGATGTTGGCACTGGAAGCCTaGTTTCCCAAACCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: MTAPCVLLPLKTFQWDKMLALEA*FPKPPD
Trigger: ATCTGGGGGTTTGGGAAACAAGGCTTCCAGTGCCAA...CATCTTGTCCCACTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGACAGTCGTCGGTCTTaGTCTGAAGGTTTCAATTTG +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGDSRRS*SEGFNL
Trigger: CAAATTGAAACCTTCAGACAAAGACCGACGACTGTC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp AACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAATCTTGGTTAAGCAACTaGTACCATCCACTGGCCGGC +
Preference number: 5 (lower is better)
Translates to: NLYHPLAGIFISSETPKESWLSN*YHPLAG
Trigger: GCCGGCCAGTGGATGGTACAAGTTGCTTAACCAAGA...TTCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGGTACTCACCTTCTTCTaGGTTAAGCAACTTGTACCA +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPVLTFF*VKQLVP
Trigger: TGGTACAAGTTGCTTAACCAAGAAGAAGGTGAGTAC...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GATGACTTTGTTGCCAGCAGGGCCAAGTTTGGCTTTCTCGAATTTCTGCCTGAGCCAGCAGGGCCAAGTTaGGCTTTCTCGAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: DDFVASRAKFGFLEFLPEPAGPS*AFSNFC
Trigger: GCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTGG...CTCAGGCAGAAATTCGAGAAAGCCAAACTTGGCCCTGCTGGCAACAAAGTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp TTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTACGTTGACTCGGTCAAGGTTGTaGGAAGGTTGTTTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: FCLSSMFPSSSPSGMGTLTRSRL*EGCFLS
Trigger: AGACAGGAAACAACCTTCCAACAACCTTGACCGAGT...CAACGTACCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp CTCGAATTTCTGCCTGAGTTCCATGTTTCCTTCCTCGTCCCCTTCCGGAATGGGTTCACTCGGTCAAGGTaGTTGGAAGGTTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: LEFLPEFHVSFLVPFRNGFTRSR*LEGCFL
Trigger: CAGGAAACAACCTTCCAACAACCTTGACCGAGTGAA...CCCATTCCGGAAGGGGACGAGGAAGGAAACATGGAACTCAGGCAGAAATTCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GGGCCAGCAGACAGAAACTTCCATCTGCACCAACCACCTCCGATGGGAAGCCGTCGCATAGAATACTGCTaGTGGTTCCTTAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: GPADRNFHLHQPPPMGSRRIEYC*WFLKFS
Trigger: GGAAAATTTAAGGAACCACAAGCAGTATTCTATGCG...ACGGCTTCCCATCGGAGGTGGTTGGTGCAGATGGAAGTTTCTGTCTGCTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCATGCACAAACTGGGGGTaGACATACGAGAACCCTTCA +
Preference number: 5 (lower is better)
Translates to: LQSFPRGLHTLGAWENLACTNWG*TYENPS
Trigger: TGAAGGGTTCTCGTATGTCAACCCCCAGTTTGTGCA...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCTTGGCTTCCTGTTCTaGGATTCCAAAGACGTCTTG +
Preference number: 5 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPLGFLF*DSKDVL
Trigger: CAAGACGTCTTTGGAATCCAAGAACAGGAAGCCAAG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CTAGGCTCTTTCTATAAACCAGTCCCTTTCCCCTCGGATCAAAGGAGGAGCACCTTGGTCTCACGAAGTTaGTGCATGCTGGAGCAAACG +
Preference number: 5 (lower is better)
Translates to: LGSFYKPVPFPSDQRRSTLVSRS*CMLEQT
Trigger: CGTTTGCTCCAGCATGCACAAACTTCGTGAGACCAA...GGTGCTCCTCCTTTGATCCGAGGGGAAAGGGACTGGTTTATAGAAAGAGCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCACAAAACAGCAAACTaGGCACTGGAAGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPHKTAN*ALEALF
Trigger: AAACAAGGCTTCCAGTGCCAAGTTTGCTGTTTTGTG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CACGCCAACACCAGCTGCACTAAAACGTCAGGTCTTGCTCTCGAGGCCCAACCACGCATAGAATACTGCTaGTGGTTCCTTAAATTTTCC +
Preference number: 5 (lower is better)
Translates to: HANTSCTKTSGLALEAQPRIEYC*WFLKFS
Trigger: GGAAAATTTAAGGAACCACAAGCAGTATTCTATGCG...TGGTTGGGCCTCGAGAGCAAGACCTGACGTTTTAGTGCAGCTGGTGTTGGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GACGTAAGTGAACTGAGTGAATCCTCCCAGCAGTCCTATGCGGCAGTCTCTATTGTGTGGATTTTGAACTaGTGCTTGCTCCTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: DVSELSESSQQSYAAVSIVWILN*CLLLGS
Trigger: TGACCCCAGGAGCAAGCACAAGTTCAAAATCCACAC...AATAGAGACTGCCGCATAGGACTGCTGGGAGGATTCACTCAGTTCACTTACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAGGGCTGGGGAGGTGTTaGTTCTCGCTGGTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SVEADARVSTSIKLLYIVGLGRC*FSLVSF
Trigger: GAAACTCACCAGCGAGAACAAACACCTCCCCAGCCC...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGAGAGACCCTGAACAGTaGATCACATTTGGACTAATA +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPRDPEQ*ITFGLI
Trigger: TATTAGTCCAAATGTGATCAACTGTTCAGGGTCTCT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTACAGGGCACGGCTGTGTaGGTCTCACGAAGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: SVEADARVSTSIKLLYIVQGTAV*VSRSLC
Trigger: GCACAAACTTCGTGAGACCAACACAGCCGTGCCCTG...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp AATGCCACAATGGCTGGAAGAAAGTCCGCAGCCTCTGAAAAGCACGTGCTGGTGGTGCTCAACAATCATTaGTTGGGCTGCATGAACCTT +
Preference number: 5 (lower is better)
Translates to: NATMAGRKSAASEKHVLVVLNNH*LGCMNL
Trigger: AAGGTTCATGCAGCCCAACAAATGATTGTTGAGCAC...CACCAGCACGTGCTTTTCAGAGGCTGCGGACTTTCTTCCAGCCATTGTGGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTAACAACAGAGCACCCTaGTCCTTCCTGGTGACTGTC +
Preference number: 5 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCNNRAP*SFLVTV
Trigger: GACAGTCACCAGGAAGGACAAGGGTGCTCTGTTGTT...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGACGGAATTAACACAATaGTGGTTGACCCCATTTCTA +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPTELTQ*WLTPFL
Trigger: TAGAAATGGGGTCAACCACAATTGTGTTAATTCCGT...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGAGCTGCCTCTTATATCTaGGGAGATCGAAGTATTTCT +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGAASYI*GDRSIS
Trigger: AGAAATACTTCGATCTCCCAAGATATAAGAGGCAGC...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS CCA 90 bp TCGGGTCCCTTATCCGCACCCGGACAAGAAAAAGTAACAAATTCATaGCACCTCTTGTGGACCACAAAACAGCAAACTTGGCACTGGAAG +
Preference number: 5 (lower is better)
Translates to: SGPLSAPGQEKVTNS*HLLWTTKQQTWHWK
Trigger: CTTCCAGTGCCAAGTTTGCTGTTTTGTGGTCCACAAGAGGTGCCATGAATTTGTTACTTTTTCTTGTCCGGGTGCGGATAAGGGACCCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284384.6
ENST00000413366.8
ENST00000578063.5
CDS-3UTR CAA 90 bp GAAGACCTTCCAGTGGGACAAGATGCAGAGGTGAGGGACAGCCATATGGATGATGACAGTCGTCGGTCTTaGTCTGAAGGTTTCAATTTG +
Preference number: 5 (lower is better)
Translates to: EDLPVGQDAEVRDSHMDDDSRRS*SEGFNL
Trigger: CAAATTGAAACCTTCAGACAAAGACCGACGACTGTC...ATCATCCATATGGCTGTCCCTCACCTCTGCATCTTGTCCCACTGGAAGGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp TCCCTCTTTCGCCTGGGTCAGGGAAGTCACGCCAACACCAGCTGCACTAAAACGCTTAAATTTTCCTACTaGCTGAATGTGGTACATGAG +
Preference number: 5 (lower is better)
Translates to: SLFRLGQGSHANTSCTKTLKFSY*LNVVHE
Trigger: CTCATGTACCACATTCAGCAAGTAGGAAAATTTAAG...CGTTTTAGTGCAGCTGGTGTTGGCGTGACTTCCCTGACCCAGGCGAAAGAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGACCAAAGTCAGCAATTTaGATATGTCCTTCTGAATCC +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGPKSAI*ICPSES
Trigger: GGATTCAGAAGGACATATCAAAATTGCTGACTTTGG...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp ATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGTGGGACAAGATGATTTTGAACTTGTGCTaGCTCCTGGGGTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: MTAPCVLLPLKTFQWDKMILNLC*LLGSSV
Trigger: CACTGATGACCCCAGGAGCAAGCACAAGTTCAAAAT...CATCTTGTCCCACTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTCCTAGAGAAACAAACTaGTGGGTGTTGGGGTTGCAG +
Preference number: 5 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCPRETN*WVLGLQ
Trigger: CTGCAACCCCAACACCCACAAGTTTGTTTCTCTAGG...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCGCTCCTCCCAAGACTGGAAAGGCCAATGCCACAATGGCTGGAAGAAAGTCCGTTAACACAATTGTGGTaGACCCCATTTCTAGATGAT +
Preference number: 5 (lower is better)
Translates to: ALLPRLERPMPQWLEESPLTQLW*TPFLDD
Trigger: ATCATCTAGAAATGGGGTCAACCACAATTGTGTTAA...CGGACTTTCTTCCAGCCATTGTGGCATTGGCCTTTCCAGTCTTGGGAGGAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GCAGAGCATCAGTCGGCCAAGTTCCACCTGAACTTGCAGTCATTCCCACGTGGACTAAACCTTAAGCAGTaGTCCCCAGTGTCTATTAAA +
Preference number: 5 (lower is better)
Translates to: AEHQSAKFHLNLQSFPRGLNLKQ*SPVSIK
Trigger: TTTAATAGACACTGGGGACAACTGCTTAAGGTTTAG...TCCACGTGGGAATGACTGCAAGTTCAGGTGGAACTTGGCCGACTGATGCTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CAACTTGTACCATCCACTGGCCGGCATCTTCATCAGCTCCGAAACTCCAAAGGAAACACCATGAGGAAATaGAAGTCCGTGAGTTTCACT +
Preference number: 5 (lower is better)
Translates to: QLVPSTGRHLHQLRNSKGNTMRK*KSVSFT
Trigger: AGTGAAACTCACGGACTTCAATTTCCTCATGGTGTT...TCCTTTGGAGTTTCGGAGCTGATGAAGATGCCGGCCAGTGGATGGTACAAGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAGCAAACGACAGGTCGTaGCAGAGGCAGCAAGACAGC +
Preference number: 5 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRANDRS*QRQQDS
Trigger: GCTGTCTTGCTGCCTCTGCAACGACCTGTCGTTTGC...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGACACAAAACAGCAAACTaGGCACTGGAAGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRHKTAN*ALEALF
Trigger: AAACAAGGCTTCCAGTGCCAAGTTTGCTGTTTTGTG...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp TTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCACAAAACAGCAAACTaGGCACTGGAAGCCTTGTTT +
Preference number: 5 (lower is better)
Translates to: LLSGVMTAPCVLLPLKTFHKTAN*ALEALF
Trigger: AAACAAGGCTTCCAGTGCCAAGTTTGCTGTTTTGTG...GAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp TTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTTCCAGGACATTGATGACGCATaGCTTGTGAACGTTCATATC +
Preference number: 5 (lower is better)
Translates to: LSGVMTAPCVLLPLKTFQDIDDA*LVNVHI
Trigger: GATATGAACGTTCACAAGCAATGCGTCATCAATGTC...CTGGAAGGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCATGCTTGCTTTCATTCTaGGGATCAGGAATAAGTTTC +
Preference number: 5 (lower is better)
Translates to: LQSFPRGLHTLGAWENLACLLSF*GSGISF
Trigger: GAAACTTATTCCTGATCCCAAGAATGAAAGCAAGCA...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTGACAGTCGTCGGTCTTaGTCTGAAGGTTTCAATTTG +
Preference number: 5 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTDSRRS*SEGFNL
Trigger: CAAATTGAAACCTTCAGACAAAGACCGACGACTGTC...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp TTCCTGGTGACTGTCATGCCTACTGCTGTCCCGGTAACTCTCATGATCACACCCCTTAAATTTTCCTACTaGCTGAATGTGGTACATGAG +
Preference number: 5 (lower is better)
Translates to: FLVTVMPTAVPVTLMITPLKFSY*LNVVHE
Trigger: CTCATGTACCACATTCAGCAAGTAGGAAAATTTAAG...GGGTGTGATCATGAGAGTTACCGGGACAGCAGTAGGCATGACAGTCACCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAAAGTTCTCTGCTCCTTaGCCACACACTTTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SVEADARVSTSIKLLYIVKFSAP*PHTLGL
Trigger: CAAGCCCAAAGTGTGTGGCAAAGGAGCAGAGAACTT...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAGGGGGACTGGCCCTTTaGTCTCCTAGGCTCTTTCTA +
Preference number: 5 (lower is better)
Translates to: HLISHNTHEGASTIEFYEGGLAL*SPRLFL
Trigger: TAGAAAGAGCCTAGGAGACAAAAGGGCCAGTCCCCC...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAATTGGCACTGGAAGCCTaGTTTCCCAAACCCCCAGAT +
Preference number: 5 (lower is better)
Translates to: HLISHNTHEGASTIEFYELALEA*FPKPPD
Trigger: ATCTGGGGGTTTGGGAAACAAGGCTTCCAGTGCCAA...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGAGACATTGATGACGCATaGCTTGTGAACGTTCATATC +
Preference number: 5 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRDIDDA*LVNVHI
Trigger: GATATGAACGTTCACAAGCAATGCGTCATCAATGTC...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp GCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTACTGCCCCTGAAGACCTGCTTGCTTTCATTCTaGGGATCAGGAATAAGTTTC +
Preference number: 5 (lower is better)
Translates to: ALLSGVMTAPCVLLPLKTCLLSF*GSGISF
Trigger: GAAACTTATTCCTGATCCCAAGAATGAAAGCAAGCA...GGTCTTCAGGGGCAGTAATACACATGGAGCTGTCATCACCCCTGATAACAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGAGTACTCACCTTCTTCTaGGTTAAGCAACTTGTACCA +
Preference number: 5 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRVLTFF*VKQLVP
Trigger: TGGTACAAGTTGCTTAACCAAGAAGAAGGTGAGTAC...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp TTGCAGTCATTCCCACGTGGACTCCATACCCTAGGAGCATGGGAAAATCTGGCATCCTTCTTCAGGATTTaGATTGCATACAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: LQSFPRGLHTLGAWENLASFFRI*IAYSSS
Trigger: AGAAGAACTGTATGCAATCAAAATCCTGAAGAAGGA...TGCCAGATTTTCCCATGCTCCTAGGGTATGGAGTCCACGTGGGAATGACTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CTGTCACCTGATCACATAAATGGGAGGCACAGGGGTCAGAATCCTTCATACTGTATAACCAAATGGTGTTaGACGGTTGAATGGCCTCTA +
Preference number: 5 (lower is better)
Translates to: LSPDHINGRHRGQNPSYCITKWC*TVEWPL
Trigger: TAGAGGCCATTCAACCGTCAAACACCATTTGGTTAT...ACAGTATGAAGGATTCTGACCCCTGTGCCTCCCATTTATGTGATCAGGTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GGAGGTATTCCAGAAGGCATTGTTATCAGGGGTGATGACAGCTCCATGTGTATTGTACTCACCTTCTTCTaGGTTAAGCAACTTGTACCA +
Preference number: 5 (lower is better)
Translates to: GGIPEGIVIRGDDSSMCIVLTFF*VKQLVP
Trigger: TGGTACAAGTTGCTTAACCAAGAAGAAGGTGAGTAC...AATACACATGGAGCTGTCATCACCCCTGATAACAATGCCTTCTGGAATACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578063.5
CDS-3UTR CAA 90 bp TGCATACAGTTCTTCTGTGCCCTTCCTGTCGGCAAGCATCACCTTTCCAAAACTCCAAAGTCAGCAATTTaGATATGTCCTTCTGAATCC +
Preference number: 5 (lower is better)
Translates to: CIQFFCALPVGKHHLSKTPKSAI*ICPSES
Trigger: GGATTCAGAAGGACATATCAAAATTGCTGACTTTGG...AGTTTTGGAAAGGTGATGCTTGCCGACAGGAAGGGCACAGAAGAACTGTATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAATTCACTCGGTCAAGGTaGTTGGAAGGTTGTTTCCTG +
Preference number: 5 (lower is better)
Translates to: HLISHNTHEGASTIEFYEFTRSR*LEGCFL
Trigger: CAGGAAACAACCTTCCAACAACCTTGACCGAGTGAA...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp GTCCGTGAGTTTCACTCGGTCAAGGTTGTTGGAAGGTTGTTTCCTGTCTTCAGATCCTTCTTCAGGATTTaGATTGCATACAGTTCTTCT +
Preference number: 5 (lower is better)
Translates to: VREFHSVKVVGRLFPVFRSFFRI*IAYSSS
Trigger: AGAAGAACTGTATGCAATCAAAATCCTGAAGAAGGA...TCTGAAGACAGGAAACAACCTTCCAACAACCTTGACCGAGTGAAACTCACGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000284384.6
CDS-3UTR CAA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGATCCATCATGTGTTCCTaGCACATCCCAAAGTCAGCA +
Preference number: 5 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRSIMCS*HIPKSA
Trigger: TGCTGACTTTGGGATGTGCAAGGAACACATGATGGA...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAATTTCGCAACACTCCTaGTCAAATTGGTGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: HLISHNTHEGASTIEFYEISQHS*SNWCVA
Trigger: GGCCACACACCAATTTGACAAGGAGTGTTGCGAAAT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAGCCGGAGCAATAATTTaGACTCCTGTGGTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: HLISHNTHEGASTIEFYEAGAII*TPVVSD
Trigger: ATCAGAAACCACAGGAGTCAAAATTATTGCTCCGGC...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp TCGGTAGAGGCTGATGCTAGAGTCAGCACTTCCATTAAGTTACTGTACATCGTAAATGGCCTCTACATTTaGTCAGTAGGTGCTTATACA +
Preference number: 5 (lower is better)
Translates to: SVEADARVSTSIKLLYIVNGLYI*SVGAYT
Trigger: TGTATAAGCACCTACTGACAAAATGTAGAGGCCATT...TACGATGTACAGTAACTTAATGGAAGTGCTGACTCTAGCATCAGCCTCTACCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp CATCTCATTTCACACAATACCCACGAAGGGGCCAGTACCATAGAATTTTATGAAAACACCATGAGGAAATaGAAGTCCGTGAGTTTCACT +
Preference number: 5 (lower is better)
Translates to: HLISHNTHEGASTIEFYENTMRK*KSVSFT
Trigger: AGTGAAACTCACGGACTTCAATTTCCTCATGGTGTT...TTCATAAAATTCTATGGTACTGGCCCCTTCGTGGGTATTGTGTGAAATGAGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAAATGATTTCACACGCTaGTTCAGCAACGTCCTTAGA +
Preference number: 5 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRNDFTR*FSNVLR
Trigger: TCTAAGGACGTTGCTGAACAAGCGTGTGAAATCATT...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS-3UTR CAA 90 bp ACTTCTACAGAATTAAACTGGACACTGAGCATGACGTACCATCTTCCACTAAGAAGGATTTGTCAATGTTaGGGAACAGTGATTAGGTTT +
Preference number: 5 (lower is better)
Translates to: TSTELNWTLSMTYHLPLRRICQC*GTVIRF
Trigger: AAACCTAATCACTGTTCCCAAACATTGACAAATCCT...TCTTAGTGGAAGATGGTACGTCATGCTCAGTGTCCAGTTTAATTCTGTAGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS TCA 72 bp AGCGCCCCTTTGCGGGCGAAGCGGTTGGCCACGTCCTaGGACGCCGTGGAGTCGTTGCCCGGGAAAACGTCA +
Preference number: 6 (lower is better)
Translates to: SAPLRAKRLATS*DAVESLPGKTS
Trigger: TGACGTTTTCCCGGGCAACGACTCCACGGCGTCTCAGGACGTGGCCAACCGCTTCGCCCGCAAAGGGGCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000413366.8
ENST00000578063.5
ENST00000583361.1
CDS CCA 72 bp TGCGGGCGAAGCGGTTGGCCACGTCCTGAGACGCCGTaGAGTCGTTGCCCGGGAAAACGTCAGCCATGGTCC +
Preference number: 6 (lower is better)
Translates to: CGRSGWPRPETP*SRCPGKRQPWS
Trigger: GGACCATGGCTGACGTTTTCCCGGGCAACGACTCCACGGCGTCTCAGGACGTGGCCAACCGCTTCGCCCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000413366.8
ENST00000578063.5
ENST00000583361.1
CDS CAA 72 bp TGCCACTGTTTGCTCGGCAACTTGGCACTGGAAGCCTaGTTTCCCAAACCCCCAGATGAAGTCGGTGCAGTG +
Preference number: 6 (lower is better)
Translates to: CHCLLGNLALEA*FPKPPDEVGAV
Trigger: CACTGCACCGACTTCATCTGGGGGTTTGGGAAACAAGGCTTCCAGTGCCAAGTTGCCGAGCAAACAGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583361.1
CDS GCA 72 bp CATTTTGGTCCTTTTTGGTGGCCTTCAGAGGCAAGCTaGCACTGTTTGCTCGGCAACTTGGCACTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: HFGPFWWPSEAS*HCLLGNLALEA
Trigger: GGCTTCCAGTGCCAAGTTGCCGAGCAAACAGTGGCAGCTTGCCTCTGAAGGCCACCAAAAAGGACCAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583361.1
CDS CCA 72 bp CTCTGCTCCTTTGCCACACACTTTGGGCTTGAATGGTaGCTGGATCTCCCTGTTCTCCAGTTTTTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: LCSFATHFGLEW*LDLPVLQFFPV
Trigger: GACTGGGAAAAACTGGAGAACAGGGAGATCCAGCCACCATTCAAGCCCAAAGTGTGTGGCAAAGGAGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS CAA 72 bp GTGGACCACAAAACAGCAAACTTGGCACTGGAAGCCTaGTTTCCCAAACCCCCAGATGAAGTCGGTGCAGTG +
Preference number: 6 (lower is better)
Translates to: VDHKTANLALEA*FPKPPDEVGAV
Trigger: CACTGCACCGACTTCATCTGGGGGTTTGGGAAACAAGGCTTCCAGTGCCAAGTTTGCTGTTTTGTGGTCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284384.6
ENST00000413366.8
ENST00000578063.5
CDS TCA 72 bp CCGCAGAGGCTGGGGACATTGATGACGCATTGCTTGTaGACGTTCATATCGCAGGTGTCACATTTCATCCCT +
Preference number: 6 (lower is better)
Translates to: PQRLGTLMTHCL*TFISQVSHFIP
Trigger: AGGGATGAAATGTGACACCTGCGATATGAACGTTCACAAGCAATGCGTCATCAATGTCCCCAGCCTCTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284384.6
ENST00000413366.8
ENST00000578063.5
CDS TCA 72 bp GCTGATCAGGTGGTGTTAAGACGGGCTGTCCTCGTGTaGAGAACTTGTCAAAGTTCTCTGCTCCTTTGCCAC +
Preference number: 6 (lower is better)
Translates to: ADQVVLRRAVLV*RTCQSSLLLCH
Trigger: GTGGCAAAGGAGCAGAGAACTTTGACAAGTTCTTCACACGAGGACAGCCCGTCTTAACACCACCTGATCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS CCA 72 bp GTTCTCTGCTCCTTTGCCACACACTTTGGGCTTGAATaGTGGCTGGATCTCCCTGTTCTCCAGTTTTTCCCA +
Preference number: 6 (lower is better)
Translates to: VLCSFATHFGLE*WLDLPVLQFFP
Trigger: TGGGAAAAACTGGAGAACAGGGAGATCCAGCCACCATTCAAGCCCAAAGTGTGTGGCAAAGGAGCAGAGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS CAA 90 bp CTCAGTGTGATCCATTCCGCAGAGGCTGGGGACATTGATGACGCATaGCTTGTGAACGTTCATATCGCAGGTGTCACATTTCATCCCTTG +
Preference number: 6 (lower is better)
Translates to: LSVIHSAEAGDIDDA*LVNVHIAGVTFHPL
Trigger: CAAGGGATGAAATGTGACACCTGCGATATGAACGTTCACAAGCAATGCGTCATCAATGTCCCCAGCCTCTGCGGAATGGATCACACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284384.6
ENST00000413366.8
ENST00000578063.5
CDS GCA 72 bp GCTGGTGAGTTTCATACTGCACTCTGTAAGATGGGGTaGACAAACTGGGGGTTGACATACGAGAACCCTTCA +
Preference number: 6 (lower is better)
Translates to: AGEFHTALCKMG*TNWGLTYENPS
Trigger: TGAAGGGTTCTCGTATGTCAACCCCCAGTTTGTGCACCCCATCTTACAGAGTGCAGTATGAAACTCACCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS CAA 72 bp GGTGGTGTTAAGACGGGCTGTCCTCGTGTGAAGAACTaGTCAAAGTTCTCTGCTCCTTTGCCACACACTTTG +
Preference number: 6 (lower is better)
Translates to: GGVKTGCPRVKN*SKFSAPLPHTL
Trigger: CAAAGTGTGTGGCAAAGGAGCAGAGAACTTTGACAAGTTCTTCACACGAGGACAGCCCGTCTTAACACCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS CAA 72 bp ATCCATTCCGCAGAGGCTGGGGACATTGATGACGCATaGCTTGTGAACGTTCATATCGCAGGTGTCACATTT +
Preference number: 6 (lower is better)
Translates to: IHSAEAGDIDDA*LVNVHIAGVTF
Trigger: AAATGTGACACCTGCGATATGAACGTTCACAAGCAATGCGTCATCAATGTCCCCAGCCTCTGCGGAATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284384.6
ENST00000413366.8
ENST00000578063.5
CDS TCA 72 bp TCAAAATCAGACTGGTCTATGTTAGCAATAACCAGCTaGTCAGGTGGTGTTAAGACGGGCTGTCCTCGTGTG +
Preference number: 6 (lower is better)
Translates to: SKSDWSMLAITS*SGGVKTGCPRV
Trigger: CACACGAGGACAGCCCGTCTTAACACCACCTGATCAGCTGGTTATTGCTAACATAGACCAGTCTGATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000413366.8
CDS CAA 72 bp TTGGTTGCCATTTCCATGCAAACATTTTGGTCCTTTTaGGTGGCCTTCAGAGGCAAGCTGCCACTGTTTGCT +
Preference number: 6 (lower is better)
Translates to: LVAISMQTFWSF*VAFRGKLPLFA
Trigger: AGCAAACAGTGGCAGCTTGCCTCTGAAGGCCACCAAAAAGGACCAAAATGTTTGCATGGAAATGGCAACCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583361.1
CDS CCA 72 bp TTATCCGCACCCGGACAAGAAAAAGTAACAAATTCATaGCACCTCTTGTGGACCACAAAACAGCAAACTTGG +
Preference number: 6 (lower is better)
Translates to: LSAPGQEKVTNS*HLLWTTKQQTW
Trigger: CCAAGTTTGCTGTTTTGTGGTCCACAAGAGGTGCCATGAATTTGTTACTTTTTCTTGTCCGGGTGCGGATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284384.6
ENST00000413366.8
ENST00000578063.5