RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKAR2B (Homo sapiens)

Ensembl gene IDs: ENSG00000005249

Ensembl transcript IDs: ENST00000265717.5, ENST00000393613.6, ENST00000488792.1, ENST00000638571.1, ENST00000639737.2, ENST00000640162.1

Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AACCTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTaGGGGTTCGCTTCCACATGCCACATTGCTATCATGCTTTTCAAT +
Preference number: 1 (lower is better)
Translates to: NLLPYRTILSYYVMP*GFASTCHIAIMLFN
Trigger: ATTGAAAAGCATGATAGCAATGTGGCATGTGGAAGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR GCA 90 bp TTAAAAACCTATTGCCATACAGAACCATACTTTCTTACTATGTTATaGCCTGGGGGTTCGCTTCCACATGCCACATTGCTATCATGCTTT +
Preference number: 1 (lower is better)
Translates to: LKTYCHTEPYFLTML*PGGSLPHATLLSCF
Trigger: AAAGCATGATAGCAATGTGGCATGTGGAAGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAGGTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR TCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATTGGCTGCTGATCAATaGGATTGTGGGTTGGCAACC +
Preference number: 2 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVLAADQ*DCGLAT
Trigger: GGTTGCCAACCCACAATCTCATTGATCAGCAGCCAA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTCATCTGAGTTCTTTCTaGACTAATTTCAACTATGAG +
Preference number: 2 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAHLSSF*TNFNYE
Trigger: CTCATAGTTGAAATTAGTGCAGAAAGAACTCAGATG...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTGCCACATTGCTATCATaGTTTTCAATGAATTATGCA +
Preference number: 2 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAATLLS*FSMNYA
Trigger: TGCATAATTCATTGAAAAGCATGATAGCAATGTGGC...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR CCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTTCTACATTAAAGCAATaGCAAGGCCTAATGGTATAT +
Preference number: 2 (lower is better)
Translates to: LLPYRTILSYYVMPWGFASTLKQ*QGLMVY
Trigger: ATATACCATTAGGCCTTGCCATTGCTTTAATGTAGA...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR TCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTAACCCATATTGGCTGCTaGTCAATGAGATTGTGGGTT +
Preference number: 2 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVTHIGC*SMRLWV
Trigger: AACCCACAATCTCATTGATCAGCAGCCAATATGGGT...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTTGTAGCATGTTTAATTaGCAAGTGCCCTCTTACATG +
Preference number: 2 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLCSMFN*QVPSYM
Trigger: CATGTAAGAGGGCACTTGGCAATTAAACATGCTACA...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCATAGGACTGTATTATaGAGGCCTAGTGAAGAACAA +
Preference number: 2 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLHRTVL*RPSEEQ
Trigger: TTGTTCTTCACTAGGCCTGCATAATACAGTCCTATG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR CCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCAAACACATTCTCAGTaGACTAACCACTACTGTGTA +
Preference number: 2 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLQTHSQ*TNHYCV
Trigger: TACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATGTAGCATGTTTAATTaGCAAGTGCCCTCTTACATG +
Preference number: 2 (lower is better)
Translates to: FKTAYDILYHFTNRPRPACSMFN*QVPSYM
Trigger: CATGTAAGAGGGCACTTGGCAATTAAACATGCTACA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR CCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCAAACAAACCCATATTaGCTGCTGATCAATGAGATT +
Preference number: 2 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLQTNPY*LLINEI
Trigger: AATCTCATTGATCAGCAGCCAATATGGGTTTGTTTG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR CCA 72 bp CCATACAGAACCATACTTTCTTACTATGTTATGCCCTaGGGGTTCGCTTCCACATGCCACATTGCTATCATG +
Preference number: 3 (lower is better)
Translates to: PYRTILSYYVMP*GFASTCHIAIM
Trigger: CATGATAGCAATGTGGCATGTGGAAGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR GCA 72 bp TATTGCCATACAGAACCATACTTTCTTACTATGTTATaGCCTGGGGGTTCGCTTCCACATGCCACATTGCTA +
Preference number: 3 (lower is better)
Translates to: YCHTEPYFLTML*PGGSLPHATLL
Trigger: TAGCAATGTGGCATGTGGAAGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR GCA 72 bp TCTTACTATGTTATGCCCTGGGGGTTCGCTTCCACATaGCACATTGCTATCATGCTTTTCAATGAATTATGC +
Preference number: 3 (lower is better)
Translates to: SYYVMPWGFAST*HIAIMLFNELC
Trigger: GCATAATTCATTGAAAAGCATGATAGCAATGTGGCATGTGGAAGCGAACCCCCAGGGCATAACATAGTAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
3UTR-3UTR CAA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCACTACTGTGTAATTTaGTCACTACAGGTCTTGCTC +
Preference number: 3 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLHYCVI*SLQVLL
Trigger: GAGCAAGACCTGTAGTGACAAAATTACACAGTAGTG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTGCTCCTCGGCGAAGTTaGCCCCCTTGCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAAPRRS*PPCWGC
Trigger: GCACCCCCAGCAAGGGGGTCAACTTCGCCGAGGAGC...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTTCTCGATGCTCATCCTaGCTCCGGGGCGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFASRCSS*LRGGRR
Trigger: GCGCCTGCCGCCCCGGAGGCAGGATGAGCATCGAGA...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTGGCCGAAGCGCGCGGTaGCTTTGCGCTCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAGRSAR*LCARSP
Trigger: AGGAGAACGAGCGCAAAGGCACCGCGCGCTTCGGCC...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGGAGCGCCTACGGCGCTaGCGCGCTACCGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQERLRR*RATGCE
Trigger: CTCGCAGCCGGTAGCGCGCCAGCGCCGTAGGCGCTC...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTAGGCGGGTGAAGTGCTaGAGCGCGAACTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFARRVKC*SANSSR
Trigger: CCTGCTGGAGTTCGCGCTGCAGCACTTCACCCGCCT...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTTCCTCGGAGTCGGACTaGATGGGCTCCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFASSESD*MGSSAK
Trigger: CTTCGCCGAGGAGCCCATGCAGTCCGACTCCGAGGA...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGAGGTCCGCGGGCTGGTaGCTCAGCACCTCCACCGTG +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQRSAGW*LSTSTV
Trigger: CACGGTGGAGGTGCTGAGGCACCAGCCCGCGGACCT...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTTTGCGCTCGTTCTCCTaGTGCAGGCGGGTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFALRSFS*CRRVKC
Trigger: GCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAA...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTAGCATTGAACGCCCCTaGGTCCGCGGGCGCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLSIERP*VRGRRL
Trigger: GAGGCGGCGCCCGCGGACGCAGGGGCGTTCAATGCT...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAGAGCGCCTACGGCGCTaGCGCGCTACCGGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAERLRR*RATGCE
Trigger: CTCGCAGCCGGTAGCGCGCCAGCGCCGTAGGCGCTC...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGAGCAGGTCCGCGGGCTaGTGCCTCAGCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQSRSAG*CLSTST
Trigger: GGTGGAGGTGCTGAGGCACCAGCCCGCGGACCTGCT...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGGGCCGAAGCGCGCGGTaGCTTTGCGCTCGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQGRSAR*LCARSP
Trigger: AGGAGAACGAGCGCAAAGGCACCGCGCGCTTCGGCC...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTAGCAGGTCCGCGGGCTaGTGCCTCAGCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLSRSAG*CLSTST
Trigger: GGTGGAGGTGCTGAGGCACCAGCCCGCGGACCTGCT...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCAGGTCCTGCCCTCATaGCCGAAGCGCGCGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLQVLPS*PKRAVP
Trigger: AGGCACCGCGCGCTTCGGCCATGAGGGCAGGACCTG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATGCTCCTCGGCGAAGTTaGCCCCCTTGCTGGGGGTGC +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYAPRRS*PPCWGC
Trigger: GCACCCCCAGCAAGGGGGTCAACTTCGCCGAGGAGC...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATCTCGATGCTCATCCTaGCTCCGGGGCGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVSRCSS*LRGGRR
Trigger: GCGCCTGCCGCCCCGGAGGCAGGATGAGCATCGAGA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACCGCCGGGATCTCGATaGTCATCCTGCCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAPPGSR*SSCLRG
Trigger: GCCCCGGAGGCAGGATGAGCATCGAGATCCCGGCGG...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTACCGCCGGGATCTCGATaGTCATCCTGCCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVPPGSR*SSCLRG
Trigger: GCCCCGGAGGCAGGATGAGCATCGAGATCCCGGCGG...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGTGCAGGCGGGTGAAGTaGTGCAGCGCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQCRRVK*CSANSS
Trigger: GCTGGAGTTCGCGCTGCAGCACTTCACCCGCCTGCA...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTACCTGCTGCAGGCGGGTaGAGTGCTGCAGCGCGAACT +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVPAAGG*SAAART
Trigger: AGTTCGCGCTGCAGCACTTCACCCGCCTGCAGCAGG...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACCTGCTGCAGGCGGGTaGAGTGCTGCAGCGCGAACT +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAPAAGG*SAAART
Trigger: AGTTCGCGCTGCAGCACTTCACCCGCCTGCAGCAGG...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTAGCGCGCGGTGCCTTTaGGCTCGTTCTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLSARCL*ARSPAA
Trigger: TGCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCT...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTGGCGTGGGCAGAAGCTaGTCGAGGTTTGTTAGTTAC +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAGVGRS*SRFVSY
Trigger: GTAACTAACAAACCTCGAGCAGCTTCTGCCCACGCC...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATAGGCGGGTGAAGTGCTaGAGCGCGAACTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYRRVKC*SANSSR
Trigger: CCTGCTGGAGTTCGCGCTGCAGCACTTCACCCGCCT...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATGCAGGCGGGTGAAGTaGTGCAGCGCGAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVCRRVK*CSANSS
Trigger: GCTGGAGTTCGCGCTGCAGCACTTCACCCGCCTGCA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACGCTCGTTCTCCTGCTaGAGGCGGGTGAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPARSFSC*RRVKCC
Trigger: GCAGCACTTCACCCGCCTGCAGCAGGAGAACGAGCG...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAAGCGCGCGGTGCCTTTaGGCTCGTTCTCCTGCTGCA +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPASARCL*ARSPAA
Trigger: TGCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCT...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATCCTCGGAGTCGGACTaGATGGGCTCCTCGGCGAAG +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPASSESD*MGSSAK
Trigger: CTTCGCCGAGGAGCCCATGCAGTCCGACTCCGAGGA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTTTATTACTGGAGCATTaGACGCCCCTGCGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLLLLEH*TPLRPR
Trigger: CCGCGGACGCAGGGGCGTTCAATGCTCCAGTAATAA...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTATGGCATCTAATACTTaGGACATCTGCTCCGGATCC +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAMASNT*DICSGS
Trigger: GGATCCGGAGCAGATGTCTCAAGTATTAGATGCCAT...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATTGCGCTCGTTCTCCTaGTGCAGGCGGGTGAAGTGC +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVLRSFS*CRRVKC
Trigger: GCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTTCGAGCGATTTCTACTaGACCATTCTCTTCCACTTC +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFASSDFY*TILFHF
Trigger: GAAGTGGAAGAGAATGGTGCAGTAGAAATCGCTCGA...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAACAGTCCCAATGGCGTaGGCAGAAGCTGCTCGAGGT +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPATVPMA*AEAARG
Trigger: ACCTCGAGCAGCTTCTGCCCACGCCATTGGGACTGT...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGCTGAGGCACGCCTTGTaGATCGGTTTATTACTGGAG +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQLRHAL*IGLLLE
Trigger: CTCCAGTAATAAACCGATTCACAAGGCGTGCCTCAG...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTAATCTCCCTGAGCAATaGTTTGTTCTCCATCGTTGT +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFANLPEQ*FVLHRC
Trigger: ACAACGATGGAGAACAAATCATTGCTCAGGGAGATT...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGTACTATGTTATGCCCTaGGGGTTCGCTTCCACATGC +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQYYVMP*GFASTC
Trigger: GCATGTGGAAGCGAACCCCCAGGGCATAACATAGTA...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCTGAGGCACGCCTTGTaGATCGGTTTATTACTGGAG +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLLRHAL*IGLLLE
Trigger: CTCCAGTAATAAACCGATTCACAAGGCGTGCCTCAG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTTTGGCTGCTGATCAATaGGATTGTGGGTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLLAADQ*DCGLAT
Trigger: GGTTGCCAACCCACAATCTCATTGATCAGCAGCCAA...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTTACTATGTTATGCCCTaGGGGTTCGCTTCCACATGC +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLYYVMP*GFASTC
Trigger: GCATGTGGAAGCGAACCCCCAGGGCATAACATAGTA...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTACCATTGCTAAACATTTaGCAGTCCCAATGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVPLLNI*QSQWRG
Trigger: CCCACGCCATTGGGACTGTCAAATGTTTAGCAATGG...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATTGGCTGCTGATCAATaGGATTGTGGGTTGGCAACC +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPALAADQ*DCGLAT
Trigger: GGTTGCCAACCCACAATCTCATTGATCAGCAGCCAA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTCATCGTTGTATACTTTaGTGCCTATCACATCTACTA +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAHRCIL*CLSHLL
Trigger: TAGTAGATGTGATAGGCACCAAAGTATACAACGATG...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTTTTTGCTTCATGCAGTaGGTTCAACAATATCCATGT +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAFCFMQ*VQQYPC
Trigger: ACATGGATATTGTTGAACCCACTGCATGAAGCAAAA...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATCACCATCGTCACCTTaGTCAATTACATGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVSPSSP*SITCSP
Trigger: TGGGGAGCATGTAATTGATCAAGGTGACGATGGTGA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATCACCATCGTCACCTTaGTCAATTACATGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPASPSSP*SITCSP
Trigger: TGGGGAGCATGTAATTGATCAAGGTGACGATGGTGA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTACAGCAGGATGTCTTTaGAAGCCTCTTGCAACCTAT +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLTAGCL*KPLATY
Trigger: ATAGGTTGCAAGAGGCTTGCAAAGACATCCTGCTGT...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTAGGGTTCGCTTCCACATaGCACATTGCTATCATGCTT +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVGFAST*HIAIML
Trigger: AAGCATGATAGCAATGTGGCATGTGGAAGCGAACCC...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTTTTCTTACTATGTTATaGCCTGGGGGTTCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLFLTML*PGGSLP
Trigger: TGGAAGCGAACCCCCAGGGCATAACATAGTAAGAAA...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTTTGATCATCAGTTTTTaGATGTATAATCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: LLPYRTILSYYVMPWGFALIISF*MYNPGL
Trigger: GAGTCCAGGATTATACATCCAAAAACTGATGATCAA...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAACCCATATTGGCTGCTaGTCAATGAGATTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPATHIGC*SMRLWV
Trigger: AACCCACAATCTCATTGATCAGCAGCCAATATGGGT...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTAACAGCAGGATGTCTTTaGAAGCCTCTTGCAACCTAT +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVTAGCL*KPLATY
Trigger: ATAGGTTGCAAGAGGCTTGCAAAGACATCCTGCTGT...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGTGTCACTACAGGTCTTaGTCCATACTTTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQCHYRS*SILLLH
Trigger: ATGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACA...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGTGTAGCATGTTTAATTaGCAAGTGCCCTCTTACATG +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQCSMFN*QVPSYM
Trigger: CATGTAAGAGGGCACTTGGCAATTAAACATGCTACA...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGCATAGGACTGTATTATaGAGGCCTAGTGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQHRTVL*RPSEEQ
Trigger: TTGTTCTTCACTAGGCCTGCATAATACAGTCCTATG...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATTTCTTACTATGTTATaGCCTGGGGGTTCGCTTCCA +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVFLTML*PGGSLP
Trigger: TGGAAGCGAACCCCCAGGGCATAACATAGTAAGAAA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTACATGCTCCCCATCTTTaGCCAATTTTTCAAACATGG +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVHAPHL*PIFQTW
Trigger: CCATGTTTGAAAAATTGGTCAAAGATGGGGAGCATG...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATCATGCTCCCCATCTTTaGCCAATTTTTCAAACATGG +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYHAPHL*PIFQTW
Trigger: CCATGTTTGAAAAATTGGTCAAAGATGGGGAGCATG...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATCACAATTATTCTCCTaGAGGTTACCCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPASQLFS*RLPCPN
Trigger: GTTTGGACAGGGTAACCTTCAGGAGAATAATTGTGA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATTCACAATTATTCTCCTaGAGGTTACCCTGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYSQLFS*RLPCPN
Trigger: GTTTGGACAGGGTAACCTTCAGGAGAATAATTGTGA...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGCGTTGTATACTTTGGTaGCTATCACATCTACTACTT +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQRCILW*LSHLLL
Trigger: AAGTAGTAGATGTGATAGGCACCAAAGTATACAACG...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGAGCCTTTCAAATGCTTaGACATCCATTGCTAAACAT +
Preference number: 4 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQSLSNA*TSIAKH
Trigger: ATGTTTAGCAATGGATGTGCAAGCATTTGAAAGGCT...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTACTTGCTCCATACTTTTaGTTCATGCAGTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVLAPYF*FMQWVQ
Trigger: TTGAACCCACTGCATGAAGCAAAAGTATGGAGCAAG...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATCTTGCTCCATACTTTTaGTTCATGCAGTGGGTTCAA +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYLAPYF*FMQWVQ
Trigger: TTGAACCCACTGCATGAAGCAAAAGTATGGAGCAAG...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCGTTGTATACTTTGGTaGCTATCACATCTACTACTT +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLRCILW*LSHLLL
Trigger: AAGTAGTAGATGTGATAGGCACCAAAGTATACAACG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCATACTTTTGCTTCATaGAGTGGGTTCAACAATATC +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLHTFAS*SGFNNI
Trigger: GATATTGTTGAACCCACTGCATGAAGCAAAAGTATG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATGTCACTACAGGTCTTaGTCCATACTTTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPACHYRS*SILLLH
Trigger: ATGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAGGACTGTATTATaGAGGCCTAGTGAAGAACAA +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAHRTVL*RPSEEQ
Trigger: TTGTTCTTCACTAGGCCTGCATAATACAGTCCTATG...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCATCGTTGTATACTTTaGTGCCTATCACATCTACTA +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLHRCIL*CLSHLL
Trigger: TAGTAGATGTGATAGGCACCAAAGTATACAACGATG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATCAAACACATTCTCAGTaGACTAACCACTACTGTGTA +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYQTHSQ*TNHYCV
Trigger: TACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTG...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR TCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATCTCCAGATTCTACAATaGAAAAAGAATCAGCCGAAT +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYLQILQ*KKNQPN
Trigger: ATTCGGCTGATTCTTTTTTCATTGTAGAATCTGGAG...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATATAATCCTGGACTCTaGATCATCTTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVYNPGL*IIFFFI
Trigger: GATGAAGAAGAAGATGATGCAGAGTCCAGGATTATA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATATAATCCTGGACTCTaGATCATCTTCTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAYNPGL*IIFFFI
Trigger: GATGAAGAAGAAGATGATGCAGAGTCCAGGATTATA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTCATCTGAGTTCTTTCTaGACTAATTTCAACTATGAG +
Preference number: 4 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLHLSSF*TNFNYE
Trigger: CTCATAGTTGAAATTAGTGCAGAAAGAACTCAGATG...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATTTTGCTTCATGCAGTaGGTTCAACAATATCCATGT +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAFCFMQ*VQQYPC
Trigger: ACATGGATATTGTTGAACCCACTGCATGAAGCAAAA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTACAAACAAACCCATATTaGCTGCTGATCAATGAGATT +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVQTNPY*LLINEI
Trigger: AATCTCATTGATCAGCAGCCAATATGGGTTTGTTTG...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATCAAACAAACCCATATTaGCTGCTGATCAATGAGATT +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYQTNPY*LLINEI
Trigger: AATCTCATTGATCAGCAGCCAATATGGGTTTGTTTG...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTACATCTGAGTTCTTTCTaGACTAATTTCAACTATGAG +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVHLSSF*TNFNYE
Trigger: CTCATAGTTGAAATTAGTGCAGAAAGAACTCAGATG...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATGCCACATTGCTATCATaGTTTTCAATGAATTATGCA +
Preference number: 4 (lower is better)
Translates to: HMIFYTISPIGQGQHITYATLLS*FSMNYA
Trigger: TGCATAATTCATTGAAAAGCATGATAGCAATGTGGC...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR GCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAGCCACATTGCTATCATaGTTTTCAATGAATTATGCA +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAATLLS*FSMNYA
Trigger: TGCATAATTCATTGAAAAGCATGATAGCAATGTGGC...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATTGATCATCAGTTTTTaGATGTATAATCCTGGACTC +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPALIISF*MYNPGL
Trigger: GAGTCCAGGATTATACATCCAAAAACTGATGATCAA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATCTACATTAAAGCAATaGCAAGGCCTAATGGTATAT +
Preference number: 4 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVSTLKQ*QGLMVY
Trigger: ATATACCATTAGGCCTTGCCATTGCTTTAATGTAGA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CCA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCATCTACATTAAAGCAATaGCAAGGCCTAATGGTATAT +
Preference number: 4 (lower is better)
Translates to: FKTAYDILYHFTNRPRPASTLKQ*QGLMVY
Trigger: ATATACCATTAGGCCTTGCCATTGCTTTAATGTAGA...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS TCA 90 bp CGAAGCGCGCGGTGCCTTTGCGCTCGTTCTCCTGCTGCAGGCGGGTaGAGTGCTGCAGCGCGAACTCCAGCAGGTCCGCGGGCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: RSARCLCARSPAAGG*SAAARTPAGPRAGA
Trigger: GGCACCAGCCCGCGGACCTGCTGGAGTTCGCGCTGCAGCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCTTCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 90 bp CCCTCATGGCCGAAGCGCGCGGTGCCTTTGCGCTCGTTCTCCTGCTaGAGGCGGGTGAAGTGCTGCAGCGCGAACTCCAGCAGGTCCGCG +
Preference number: 5 (lower is better)
Translates to: PSWPKRAVPLRSFSC*RRVKCCSANSSRSA
Trigger: CGCGGACCTGCTGGAGTTCGCGCTGCAGCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCTTCGGCCATGAGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGGGCTCCTCGGCGAAGTaGACCCCCTTGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQGSSAK*TPLLGV
Trigger: CACCCCCAGCAAGGGGGTCAACTTCGCCGAGGAGCC...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTAAGCGCGCGGTGCCTTaGCGCTCGTTCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLKRAVP*RSFSCC
Trigger: GCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCTT...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAGGCTCCTCGGCGAAGTaGACCCCCTTGCTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAGSSAK*TPLLGV
Trigger: CACCCCCAGCAAGGGGGTCAACTTCGCCGAGGAGCC...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS TCA 90 bp AGTTTTTGTGCAATCCAAATGTCCATAACACGCAAATCTGTCCACTaGAAGCTGCAATCTCATCCTGGTGTGCGCACCACTCAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SFCAIQMSITRKSVH*KLQSHPGVRTTQLA
Trigger: TGCCAGCTGAGTGGTGCGCACACCAGGATGAGATTGCAGCTTTCAGTGGACAGATTTGCGTGTTATGGACATTTGGATTGCACAAAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393613.6
ENST00000638571.1
CDS-3UTR CAA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTAAAGCGCGCGGTGCCTTaGCGCTCGTTCTCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVKRAVP*RSFSCC
Trigger: GCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCTT...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTAACAGCAGGATGTCTTaGCAAGCCTCTTGCAACCTA +
Preference number: 5 (lower is better)
Translates to: LLPYRTILSYYVMPWGFANSRMS*QASCNL
Trigger: TAGGTTGCAAGAGGCTTGCAAAGACATCCTGCTGTT...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTTCCATTGCTAAACATTaGACAGTCCCAATGGCGTGG +
Preference number: 5 (lower is better)
Translates to: LLPYRTILSYYVMPWGFASIAKH*TVPMAW
Trigger: CCACGCCATTGGGACTGTCAAATGTTTAGCAATGGA...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGGAAGCTGCTCGAGGTTaGTTAGTTACCAGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQEAARG*LVTRAS
Trigger: GCTTGCCCTGGTAACTAACAAACCTCGAGCAGCTTC...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATTTATTACTGGAGCATaGAACGCCCCTGCGTCCGCG +
Preference number: 5 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVFITGA*NAPASA
Trigger: CGCGGACGCAGGGGCGTTCAATGCTCCAGTAATAAA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTCACTACTGTGTAATTTaGTCACTACAGGTCTTGCTC +
Preference number: 5 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAHYCVI*SLQVLL
Trigger: GAGCAAGACCTGTAGTGACAAAATTACACAGTAGTG...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTCTTCCACATGCCACATaGCTATCATGCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: LLPYRTILSYYVMPWGFALPHAT*LSCFSM
Trigger: CATTGAAAAGCATGATAGCAATGTGGCATGTGGAAG...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 90 bp TGTGTAATTTTGTCACTACAGGTCTTGCTCCATACTTTTGCTTCATaGAGTGGGTTCAACAATATCCATGTTCGTTCCAAACAGGGCAAC +
Preference number: 5 (lower is better)
Translates to: CVILSLQVLLHTFAS*SGFNNIHVRSKQGN
Trigger: GTTGCCCTGTTTGGAACGAACATGGATATTGTTGAACCCACTGCATGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAAAATTACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTGTCACCATCGTCACCTaGATCAATTACATGCTCCCC +
Preference number: 5 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLVTIVT*INYMLP
Trigger: GGGGAGCATGTAATTGATCAAGGTGACGATGGTGAC...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTGCTGCTCTGGGTGTATaGTACATTAAGGCCAGTTCG +
Preference number: 5 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLAALGV*YIKASS
Trigger: CGAACTGGCCTTAATGTACAATACACCCAGAGCAGC...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATGAAGCTGCTCGAGGTTaGTTAGTTACCAGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: HMIFYTISPIGQGQHITYEAARG*LVTRAS
Trigger: GCTTGCCCTGGTAACTAACAAACCTCGAGCAGCTTC...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 90 bp CCACTACTGTGTAATTTTGTCACTACAGGTCTTGCTCCATACTTTTaGTTCATGCAGTGGGTTCAACAATATCCATGTTCGTTCCAAACA +
Preference number: 5 (lower is better)
Translates to: PLLCNFVTTGLAPYF*FMQWVQQYPCSFQT
Trigger: TGTTTGGAACGAACATGGATATTGTTGAACCCACTGCATGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAAAATTACACAGTAGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS CCA 90 bp AATTTTGTCACTACAGGTCTTGCTCCATACTTTTGCTTCATGCAGTaGGTTCAACAATATCCATGTTCGTTCCAAACAGGGCAACTAACT +
Preference number: 5 (lower is better)
Translates to: NFVTTGLAPYFCFMQ*VQQYPCSFQTGQLT
Trigger: AGTTAGTTGCCCTGTTTGGAACGAACATGGATATTGTTGAACCCACTGCATGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAGTCACCATCGTCACCTaGATCAATTACATGCTCCCC +
Preference number: 5 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAVTIVT*INYMLP
Trigger: GGGGAGCATGTAATTGATCAAGGTGACGATGGTGAC...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATGCTGCTCTGGGTGTATaGTACATTAAGGCCAGTTCG +
Preference number: 5 (lower is better)
Translates to: HMIFYTISPIGQGQHITYAALGV*YIKASS
Trigger: CGAACTGGCCTTAATGTACAATACACCCAGAGCAGC...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGTCTTGCTCCATACTTTaGCTTCATGCAGTGGGTTCA +
Preference number: 5 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQSCSIL*LHAVGS
Trigger: TGAACCCACTGCATGAAGCAAAAGTATGGAGCAAGA...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CTATTGCCATACAGAACCATACTTTCTTACTATGTTATGCCCTGGGGGTTCGCTGTTAGCCAGATTGATTaGGTTATTCTAAATGGCCAA +
Preference number: 5 (lower is better)
Translates to: LLPYRTILSYYVMPWGFAVSQID*VILNGQ
Trigger: TTGGCCATTTAGAATAACCAAATCAATCTGGCTAAC...AGCGAACCCCCAGGGCATAACATAGTAAGAAAGTATGGTTCTGTATGGCAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAAACAGCAGGATGTCTTaGCAAGCCTCTTGCAACCTA +
Preference number: 5 (lower is better)
Translates to: FKTAYDILYHFTNRPRPANSRMS*QASCNL
Trigger: TAGGTTGCAAGAGGCTTGCAAAGACATCCTGCTGTT...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGTCCCTGAGCAATGATTaGTTCTCCATCGTTGTATAC +
Preference number: 5 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQSLSND*FSIVVY
Trigger: GTATACAACGATGGAGAACAAATCATTGCTCAGGGA...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATCCATTGCTAAACATTaGACAGTCCCAATGGCGTGG +
Preference number: 5 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVSIAKH*TVPMAW
Trigger: CCACGCCATTGGGACTGTCAAATGTTTAGCAATGGA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp ACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGATTTGTTCTCCATCGTaGTATACTTTGGTGCCTATC +
Preference number: 5 (lower is better)
Translates to: TQTHSQWTNHYCVILSLQICSPS*YTLVPI
Trigger: GATAGGCACCAAAGTATACAACGATGGAGAACAAAT...CTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp GCAATGGCAAGGCCTAATGGTATATATGGTAAGGTCAGAAATTCATTTTGTCTTTTGTCACTACAGGTCTaGCTCCATACTTTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: AMARPNGIYGKVRNSFCLLSLQV*LHTFAS
Trigger: TGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAA...AAGACAAAATGAATTTCTGACCTTACCATATATACCATTAGGCCTTGCCATTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTAGTCTTTGCAAGCCTCTaGCAACCTATTTCTTTGATC +
Preference number: 5 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVVFASL*QPISLI
Trigger: GATCAAAGAAATAGGTTGCAAGAGGCTTGCAAAGAC...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTACCATCGTTGTATACTTaGGTGCCTATCACATCTACT +
Preference number: 5 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVPSLYT*VPITST
Trigger: AGTAGATGTGATAGGCACCAAAGTATACAACGATGG...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATCCATCGTTGTATACTTaGGTGCCTATCACATCTACT +
Preference number: 5 (lower is better)
Translates to: HMIFYTISPIGQGQHITYPSLYT*VPITST
Trigger: AGTAGATGTGATAGGCACCAAAGTATACAACGATGG...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATCCCTGAGCAATGATTaGTTCTCCATCGTTGTATAC +
Preference number: 5 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVSLSND*FSIVVY
Trigger: GTATACAACGATGGAGAACAAATCATTGCTCAGGGA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTATTGTCACTACAGGTCTaGCTCCATACTTTTGCTTCA +
Preference number: 5 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVLSLQV*LHTFAS
Trigger: TGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAA...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp CATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCACATAACTTATCTTCCACATGCCACATaGCTATCATGCTTTTCAATG +
Preference number: 5 (lower is better)
Translates to: HMIFYTISPIGQGQHITYLPHAT*LSCFSM
Trigger: CATTGAAAAGCATGATAGCAATGTGGCATGTGGAAG...ATAAGTTATGTGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAACATGCTCCCCATCTTaGACCAATTTTTCAAACATG +
Preference number: 5 (lower is better)
Translates to: FKTAYDILYHFTNRPRPATCSPS*TNFSNM
Trigger: CATGTTTGAAAAATTGGTCAAAGATGGGGAGCATGT...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTCAACTATGAGTCTACATTAAAGCAATGGCAAGGCCTAATGGTATATATGGTAACATGCTCCCCATCTTaGACCAATTTTTCAAACATG +
Preference number: 5 (lower is better)
Translates to: FNYESTLKQWQGLMVYMVTCSPS*TNFSNM
Trigger: CATGTTTGAAAAATTGGTCAAAGATGGGGAGCATGT...TACCATATATACCATTAGGCCTTGCCATTGCTTTAATGTAGACTCATAGTTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS-3UTR CAA 90 bp TTTAAAACTGCATATGATATTTTATACCATTTCACCAATAGGCCAAGGCCAGCAATTTGTTCTCCATCGTaGTATACTTTGGTGCCTATC +
Preference number: 5 (lower is better)
Translates to: FKTAYDILYHFTNRPRPAICSPS*YTLVPI
Trigger: GATAGGCACCAAAGTATACAACGATGGAGAACAAAT...TGCTGGCCTTGGCCTATTGGTGAAATGGTATAAAATATCATATGCAGTTTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 72 bp GCTCCGTCAGTCCCGCCGGGATCTCGATGCTCATCCTaGCTCCGGGGCGGCAGGCGCCTGGGCGCCGCCCTC +
Preference number: 6 (lower is better)
Translates to: APSVPPGSRCSS*LRGGRRLGAAL
Trigger: GAGGGCGGCGCCCAGGCGCCTGCCGCCCCGGAGGCAGGATGAGCATCGAGATCCCGGCGGGACTGACGGAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 72 bp GCCGCCTCCTCCTCCTCCCCGTCCTCGGAGTCGGACTaGATGGGCTCCTCGGCGAAGTTGACCCCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: AASSSSPSSESD*MGSSAKLTPLL
Trigger: CAGCAAGGGGGTCAACTTCGCCGAGGAGCCCATGCAGTCCGACTCCGAGGACGGGGAGGAGGAGGAGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS TCA 72 bp CGGTGCCTTTGCGCTCGTTCTCCTGCTGCAGGCGGGTaGAGTGCTGCAGCGCGAACTCCAGCAGGTCCGCGG +
Preference number: 6 (lower is better)
Translates to: RCLCARSPAAGG*SAAARTPAGPR
Trigger: CCGCGGACCTGCTGGAGTTCGCGCTGCAGCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAAAGGCACCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 72 bp TTGCGCTCGTTCTCCTGCTGCAGGCGGGTGAAGTGCTaGAGCGCGAACTCCAGCAGGTCCGCGGGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: LRSFSCCRRVKC*SANSSRSAGWC
Trigger: GCACCAGCCCGCGGACCTGCTGGAGTTCGCGCTGCAGCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 72 bp CCGAAGCGCGCGGTGCCTTTGCGCTCGTTCTCCTGCTaGAGGCGGGTGAAGTGCTGCAGCGCGAACTCCAGC +
Preference number: 6 (lower is better)
Translates to: PKRAVPLRSFSC*RRVKCCSANSS
Trigger: GCTGGAGTTCGCGCTGCAGCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCTTCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 72 bp TGGCCGAAGCGCGCGGTGCCTTTGCGCTCGTTCTCCTaGTGCAGGCGGGTGAAGTGCTGCAGCGCGAACTCC +
Preference number: 6 (lower is better)
Translates to: WPKRAVPLRSFS*CRRVKCCSANS
Trigger: GGAGTTCGCGCTGCAGCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCTTCGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS CAA 72 bp CAGGTCCTGCCCTCATGGCCGAAGCGCGCGGTGCCTTaGCGCTCGTTCTCCTGCTGCAGGCGGGTGAAGTGC +
Preference number: 6 (lower is better)
Translates to: QVLPSWPKRAVP*RSFSCCRRVKC
Trigger: GCACTTCACCCGCCTGCAGCAGGAGAACGAGCGCAAAGGCACCGCGCGCTTCGGCCATGAGGGCAGGACCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 72 bp AATCTGTCCACTGAAAGCTGCAATCTCATCCTGGTGTaGGCACCACTCAGCTGGCAAGCCTACCATCTGCCC +
Preference number: 6 (lower is better)
Translates to: NLSTESCNLILV*APLSWQAYHLP
Trigger: GGGCAGATGGTAGGCTTGCCAGCTGAGTGGTGCGCACACCAGGATGAGATTGCAGCTTTCAGTGGACAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393613.6
ENST00000638571.1
CDS CCA 72 bp ACGCAAATCTGTCCACTGAAAGCTGCAATCTCATCCTaGTGTGCGCACCACTCAGCTGGCAAGCCTACCATC +
Preference number: 6 (lower is better)
Translates to: TQICPLKAAISS*CAHHSAGKPTI
Trigger: GATGGTAGGCTTGCCAGCTGAGTGGTGCGCACACCAGGATGAGATTGCAGCTTTCAGTGGACAGATTTGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393613.6
ENST00000638571.1
CDS CAA 72 bp GGAGAGGTAGCAGTGATTGTAGCTGCTCTGGGTGTATaGTACATTAAGGCCAGTTCGCCGAAACTCCCACGA +
Preference number: 6 (lower is better)
Translates to: GEVAVIVAALGV*YIKASSPKLPR
Trigger: TCGTGGGAGTTTCGGCGAACTGGCCTTAATGTACAATACACCCAGAGCAGCTACAATCACTGCTACCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265717.5
ENST00000488792.1
ENST00000639737.2
ENST00000640162.1
CDS TCA 72 bp GCAATCCAAATGTCCATAACACGCAAATCTGTCCACTaGAAGCTGCAATCTCATCCTGGTGTGCGCACCACT +
Preference number: 6 (lower is better)
Translates to: AIQMSITRKSVH*KLQSHPGVRTT
Trigger: AGTGGTGCGCACACCAGGATGAGATTGCAGCTTTCAGTGGACAGATTTGCGTGTTATGGACATTTGGATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393613.6
ENST00000638571.1
CDS GCA 72 bp GTCCAGGTTATTCTTGAAAATCCCATAGGAAGCCACTaGTGGAGACTGTCACATAGCCCTACAAGAAGTCCA +
Preference number: 6 (lower is better)
Translates to: VQVILENPIGSH*WRLSHSPTRSP
Trigger: TGGACTTCTTGTAGGGCTATGTGACAGTCTCCAGCAGTGGCTTCCTATGGGATTTTCAAGAATAACCTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000488792.1
ENST00000640162.1
CDS CCA 72 bp ACTACAGGTCTTGCTCCATACTTTTGCTTCATGCAGTaGGTTCAACAATATCCATGTTCGTTCCAAACAGGG +
Preference number: 6 (lower is better)
Translates to: TTGLAPYFCFMQ*VQQYPCSFQTG
Trigger: CCCTGTTTGGAACGAACATGGATATTGTTGAACCCACTGCATGAAGCAAAAGTATGGAGCAAGACCTGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS CAA 90 bp TCTACACAAACACATTCTCAGTGGACTAACCACTACTGTGTAATTTaGTCACTACAGGTCTTGCTCCATACTTTTGCTTCATGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: STQTHSQWTNHYCVI*SLQVLLHTFASCSG
Trigger: CCCACTGCATGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS CAA 90 bp TCTCAGTGGACTAACCACTACTGTGTAATTTTGTCACTACAGGTCTaGCTCCATACTTTTGCTTCATGCAGTGGGTTCAACAATATCCAT +
Preference number: 6 (lower is better)
Translates to: SQWTNHYCVILSLQV*LHTFASCSGFNNIH
Trigger: ATGGATATTGTTGAACCCACTGCATGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS GCA 72 bp TGTAATTTTGTCACTACAGGTCTTGCTCCATACTTTTaGTTCATGCAGTGGGTTCAACAATATCCATGTTCG +
Preference number: 6 (lower is better)
Translates to: CNFVTTGLAPYF*FMQWVQQYPCS
Trigger: CGAACATGGATATTGTTGAACCCACTGCATGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAAAATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2
CDS CAA 72 bp ACACATTCTCAGTGGACTAACCACTACTGTGTAATTTaGTCACTACAGGTCTTGCTCCATACTTTTGCTTCA +
Preference number: 6 (lower is better)
Translates to: THSQWTNHYCVI*SLQVLLHTFAS
Trigger: TGAAGCAAAAGTATGGAGCAAGACCTGTAGTGACAAAATTACACAGTAGTGGTTAGTCCACTGAGAATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265717.5
ENST00000639737.2