RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKAR2A (Homo sapiens)

Ensembl gene IDs: ENSG00000114302

Ensembl transcript IDs: ENST00000265563.13, ENST00000296446.12, ENST00000419216.1, ENST00000437821.2, ENST00000438535.1, ENST00000454963.5, ENST00000457914.5

Found 435 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCCCAAATTTTCTGCTCTAACATGGGTCCCACGGACCTATCAGTCTaGTCTGGGGTGCTGACCTGCTGGGTCCTGAGCAGGGTCTTTCCC +
Preference number: 1 (lower is better)
Translates to: AQIFCSNMGPTDLSV*SGVLTCWVLSRVFP
Trigger: GGGAAAGACCCTGCTCAGGACCCAGCAGGTCAGCACCCCAGAGCAGACTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAATTTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR GCA 90 bp CACACTAAGAAGGCTCTGGGGTGTGGCACACCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGCCAAACATCTTCACCAGCTGTTCCT +
Preference number: 1 (lower is better)
Translates to: HTKKALGCGTPTARG*PDPRWSQTSSPAVP
Trigger: AGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCTTCTTAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
3UTR CCA 90 bp CTGGGGTGTGGCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCAGCTGTTCCTCATAGTGTGAGATGT +
Preference number: 1 (lower is better)
Translates to: LGCGTPTARGCPDPR*SQTSSPAVPHSVRC
Trigger: ACATCTCACACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
3UTR CCA 90 bp CATCTACCAGTTGCTTGGGTCCTAGATTTCATATGCTCCCACAGTTaGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTGGGCAAG +
Preference number: 1 (lower is better)
Translates to: HLPVAWVLDFICSHS*PFGTGRCLCPNVGK
Trigger: CTTGCCCACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACCCAAGCAACTGGTAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR TCA 90 bp CAATGTGGATACCTCAGCCCTGAGTTGAACTTGGCATGCCACCTTTaGTTCCCCATGCTGCAAAAAGAATTGGAACGCTGTCAGGTCCTG +
Preference number: 1 (lower is better)
Translates to: QCGYLSPELNLACHL*FPMLQKELERCQVL
Trigger: CAGGACCTGACAGCGTTCCAATTCTTTTTGCAGCATGGGGAATCAAAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGTATCCACATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR TCA 90 bp CAGGGCTTGCCTGATGTGGACAATGTGGATACCTCAGCCCTGAGTTaGACTTGGCATGCCACCTTTGATTCCCCATGCTGCAAAAAGAAT +
Preference number: 1 (lower is better)
Translates to: QGLPDVDNVDTSALS*TWHATFDSPCCKKN
Trigger: ATTCTTTTTGCAGCATGGGGAATCAAAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGTATCCACATTGTCCACATCAGGCAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR GCA 90 bp TCCCAAGATTTCCATCTACCAGTTGCTTGGGTCCTAGATTTCATATaGTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCA +
Preference number: 1 (lower is better)
Translates to: SQDFHLPVAWVLDFI*SHSWPFGTGRCLCP
Trigger: TGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACCCAAGCAACTGGTAGATGGAAATCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR TCA 90 bp AATGCTCTTCTTTCTGAATTAGAGGGTAGCTTGTACACTGTGACATaGCATGAAATGCTGTGTGCCCAGGGTGCTGCTGGGTGCCAACAG +
Preference number: 1 (lower is better)
Translates to: NALLSELEGSLYTVT*HEMLCAQGAAGCQQ
Trigger: CTGTTGGCACCCAGCAGCACCCTGGGCACACAGCATTTCATGTCATGTCACAGTGTACAAGCTACCCTCTAATTCAGAAAGAAGAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR GCA 90 bp TGCTGGGTGCCAACAGCACCTCTCACTGAATACGATATCACTGTGTaGAGAGAAAACGGGCAATCAGAGGATAAACATAACCTCTCCTGG +
Preference number: 1 (lower is better)
Translates to: CWVPTAPLTEYDITV*RENGQSEDKHNLSW
Trigger: CCAGGAGAGGTTATGTTTATCCTCTGATTGCCCGTTTTCTCTGCACACAGTGATATCGTATTCAGTGAGAGGTGCTGTTGGCACCCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CCA 90 bp ACGGCAGGAACAGTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTaGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGG +
Preference number: 1 (lower is better)
Translates to: TAGTVLSCLFSVCVL*LTRRFWCHTKKALG
Trigger: CCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAACTGTTCCTGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
3UTR CCA 90 bp GGAGGAGGCATCTGCTCAGTGTTCAAACAAAATCCTTACAAGTTCTaGGGCTGGACCTCTGTGTCACTCCTGAATCCCAATGTATCCGTT +
Preference number: 1 (lower is better)
Translates to: GGGICSVFKQNPYKF*GWTSVSLLNPNVSV
Trigger: AACGGATACATTGGGATTCAGGAGTGACACAGAGGTCCAGCCCCAGAACTTGTAAGGATTTTGTTTGAACACTGAGCAGATGCCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CCA 90 bp AGTTGCTTGGGTCCTAGATTTCATATGCTCCCACAGTTGGCCCTTTaGTACAGGCAGGTGTCTCTGTCCAAATGTGGGCAAGATCAAACT +
Preference number: 1 (lower is better)
Translates to: SCLGPRFHMLPQLAL*YRQVSLSKCGQDQT
Trigger: AGTTTGATCTTGCCCACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACCCAAGCAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR TCA 90 bp GCTGCCTGTTTTGGAAAGCTGCAATGTAGGCTACAGAGGGCAGTCTaGAAAGAGTCCTTCTGCTTTCGCTTCCTGGAGCTTAAGAAGAAA +
Preference number: 1 (lower is better)
Translates to: AACFGKLQCRLQRAV*KESFCFRFLELKKK
Trigger: TTTCTTCTTAAGCTCCAGGAAGCGAAAGCAGAAGGACTCTTTTCAGACTGCCCTCTGTAGCCTACATTGCAGCTTTCCAAAACAGGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR GCA 90 bp TCTTTCCCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTaGAGCTGTCAGCAGAAAGTACAATGCCACTGGGCTACATATGTC +
Preference number: 1 (lower is better)
Translates to: SFPKHHCGFGDSCNV*SCQQKVQCHWATYV
Trigger: GACATATGTAGCCCAGTGGCATTGTACTTTCTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR CCA 90 bp TTTGATTCCCCATGCTGCAAAAAGAATTGGAACGCTGTCAGGTCCTaGCACCGTGGTAATGGCTATATCCTATTTCACTCACACACGTCC +
Preference number: 1 (lower is better)
Translates to: FDSPCCKKNWNAVRS*HRGNGYILFHSHTS
Trigger: GGACGTGTGTGAGTGAAATAGGATATAGCCATTACCACGGTGCCAGGACCTGACAGCGTTCCAATTCTTTTTGCAGCATGGGGAATCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CCA 90 bp TCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTaGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCATCCAA +
Preference number: 1 (lower is better)
Translates to: SFREFNQEKRVGGIS*GPKGRLSGIFSTIQ
Trigger: TTGGATGGTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
3UTR CCA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTaGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTC +
Preference number: 1 (lower is better)
Translates to: HEPFLQRIQPREESG*HKLGAKRKALRNIL
Trigger: GAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
3UTR TCA 90 bp AAAACAGCAACTATCATTAAGTCAGGGGTGTCAAGGAGGACTCTGTaGAGGCAAAGACTAGACTGGGATGTGTGCGAGAGTGGGATAAGA +
Preference number: 1 (lower is better)
Translates to: KTATIIKSGVSRRTL*RQRLDWDVCESGIR
Trigger: TCTTATCCCACTCTCGCACACATCCCAGTCTAGTCTTTGCCTTCACAGAGTCCTCCTTGACACCCCTGACTTAATGATAGTTGCTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR GCA 90 bp TTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGAAAGTACAATaGCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCA +
Preference number: 1 (lower is better)
Translates to: FGDSCNVCSCQQKVQ*HWATYVHIIHHHFP
Trigger: TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCTGCTGACAGCTGCACACATTACAGCTGTCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR CCA 90 bp GGCATCTGCTCAGTGTTCAAACAAAATCCTTACAAGTTCTGGGGCTaGACCTCTGTGTCACTCCTGAATCCCAATGTATCCGTTACCTTT +
Preference number: 1 (lower is better)
Translates to: GICSVFKQNPYKFWG*TSVSLLNPNVSVTF
Trigger: AAAGGTAACGGATACATTGGGATTCAGGAGTGACACAGAGGTCCAGCCCCAGAACTTGTAAGGATTTTGTTTGAACACTGAGCAGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR TCA 90 bp AACAAAATCCTTACAAGTTCTGGGGCTGGACCTCTGTGTCACTCCTaGATCCCAATGTATCCGTTACCTTTACAAGAAACTGGTGTGGTT +
Preference number: 1 (lower is better)
Translates to: NKILTSSGAGPLCHS*IPMYPLPLQETGVV
Trigger: AACCACACCAGTTTCTTGTAAAGGTAACGGATACATTGGGATTCAGGAGTGACACAGAGGTCCAGCCCCAGAACTTGTAAGGATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR TCA 90 bp CATAACCTCTCCTGGCTGGAGAACCATTTCTTGCGACTTTGCTGCTaGATTCACTCATTAAACTGCTCAAAGGAAAAGCTCTACCCTGAT +
Preference number: 1 (lower is better)
Translates to: HNLSWLENHFLRLCC*IHSLNCSKEKLYPD
Trigger: ATCAGGGTAGAGCTTTTCCTTTGAGCAGTTTAATGAGTGAATTCAGCAGCAAAGTCGCAAGAAATGGTTCTCCAGCCAGGAGAGGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CCA 90 bp AAATTGTTGGAGAGACATGCCGTTTTGAACCAAAGATATAAAAACTaGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCA +
Preference number: 1 (lower is better)
Translates to: KLLERHAVLNQRYKN*VGVIFTSGLMNGPS
Trigger: TGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTCCAACAATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR TCA 90 bp TGGAGTCTTGCACTGTCACCCGGGGTGGAATACAATGGTGCAATCTCGGCTCACCTGGTCTTGAACCCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 2 (lower is better)
Translates to: WSLALSPGVEYNGAISAHLVLNP*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGGGTTCAAGACCAG...GTGAGCCGAGATTGCACCATTGTATTCCACCCCGGGTGACAGTGCAAGACTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CCA 90 bp CACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTCTGTTCAGCAATGGCAGCAGTaGCGGCAACGGCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: HSNGSSGGNGRNSSVMSVQQWQQ*RQRQEQ
Trigger: CTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTG...AACAGACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
3UTR-3UTR CCA 90 bp TGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCATCCACAGCAATGGCAGCAGTaGCGGCAACGGCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: WHKLGAKRKALRNILYHPQQWQQ*RQRQEQ
Trigger: CTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTG...TGGATGGTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR TCA 90 bp AGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATAGTGGAGGTGTGGGTTaGACCTCTGCCCATCCTTTA +
Preference number: 2 (lower is better)
Translates to: REESGWHKLGAKRKALRNSGGVG*TSAHPL
Trigger: TAAAGGATGGGCAGAGGTTCAACCCACACCTCCACT...ATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR GCA 90 bp TGGAGTCTTGCACTGTCACCCGGGGTGGAATACAATGGTGCAATCTCGGCTCACTTCAAGCGATTCTCCTaGCTGAGCCTCTCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: WSLALSPGVEYNGAISAHFKRFS*LSLSSS
Trigger: GCTACTTGAGAGGCTCAGGCAGGAGAATCGCTTGAA...GTGAGCCGAGATTGCACCATTGTATTCCACCCCGGGTGACAGTGCAAGACTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CCA 90 bp TCCCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGCAAAGTGGAGGTGTaGGTTGAACCTCTGCCCATC +
Preference number: 2 (lower is better)
Translates to: SLSITVGLETAVMCAAVSSKVEV*VEPLPI
Trigger: GATGGGCAGAGGTTCAACCCACACCTCCACTTTGCT...GCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR CAA 90 bp CTGCTGGGTCCTGAGCAGGGTCTTTCCCTAAGCATCACTGTGGGTTaGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGAAAGTACAAT +
Preference number: 2 (lower is better)
Translates to: LLGPEQGLSLSITVG*ETAVMCAAVSRKYN
Trigger: ATTGTACTTTCTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGAAAGACCCTGCTCAGGACCCAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR CAA 90 bp CCATCTACCAGTTGCTTGGGTCCTAGATTTCATATGCTCCCACAGTaGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTGGGCAA +
Preference number: 2 (lower is better)
Translates to: PSTSCLGPRFHMLPQ*ALWYRQVSLSKCGQ
Trigger: TTGCCCACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACCCAAGCAACTGGTAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR-3UTR CCA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCCTGACCAGAAGGTTTTaGTGTCACACTAAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSLTRRF*CHTKKA
Trigger: AGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAG...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR GCA 90 bp TGGAGTCTTGCACTGTCACCCGGGGTGGAATACAATGGTGCAATCTCGGCTCACTATACAACAGGTTTCTaGAGACCCTGTGGTAACTTC +
Preference number: 2 (lower is better)
Translates to: WSLALSPGVEYNGAISAHYTTGF*RPCGNF
Trigger: GAAGTTACCACAGGGTCTGCAGAAACCTGTTGTATA...GTGAGCCGAGATTGCACCATTGTATTCCACCCCGGGTGACAGTGCAAGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR TCA 90 bp GAGGCATCTGCTCAGTGTTCAAACAAAATCCTTACAAGTTCTGGGGCTGGACCTATAGGCATGAGCCATTaGGCCTGGCCTGAGAATTTT +
Preference number: 2 (lower is better)
Translates to: EASAQCSNKILTSSGAGPIGMSH*AWPENF
Trigger: AAAATTCTCAGGCCAGGCTCAATGGCTCATGCCTAT...AGGTCCAGCCCCAGAACTTGTAAGGATTTTGTTTGAACACTGAGCAGATGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CCA 90 bp TTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGTTTCTGCAGCAATGGCAGCAGTaGCGGCAACGGCAGGAACAG +
Preference number: 2 (lower is better)
Translates to: FPPLRTIRECLQLYNRFLQQWQQ*RQRQEQ
Trigger: CTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTG...CAGAAACCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR CCA 90 bp GGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGAGGAGCAAAGTGGAGGTGTaGGTTGAACCTCTGCCCATC +
Preference number: 2 (lower is better)
Translates to: GVIFTSGLMNGPSEAKWRSKVEV*VEPLPI
Trigger: GATGGGCAGAGGTTCAACCCACACCTCCACTTTGCT...CCTCCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
3UTR-3UTR CCA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCAACTGTGAACAAATGTaGACTTCCTCAAAGGACAAA +
Preference number: 2 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSNCEQM*TSSKDK
Trigger: TTTGTCCTTTGAGGAAGTCCACATTTGTTCACAGTT...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR CCA 90 bp TCCAGCATACTGCCATCAGCTAGTAGAGGCAACTGCAAACAAATGGTAGGAGTTGCCCAGGAAGGTATTTaGGCTGGACAAAGTGATAGC +
Preference number: 2 (lower is better)
Translates to: SSILPSASRGNCKQMVGVAQEGI*AGQSDS
Trigger: GCTATCACTTTGTCCAGCCCAAATACCTTCCTGGGC...AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGCTGATGGCAGTATGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR GCA 90 bp GAGGCATCTGCTCAGTGTTCAAACAAAATCCTTACAAGTTCTGGGGCTGGACCTGACAGCTGTAATGTGTaGAGCTGTCAGCAGAAAGTA +
Preference number: 2 (lower is better)
Translates to: EASAQCSNKILTSSGAGPDSCNV*SCQQKV
Trigger: TACTTTCTGCTGACAGCTGCACACATTACAGCTGTC...AGGTCCAGCCCCAGAACTTGTAAGGATTTTGTTTGAACACTGAGCAGATGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CAA 90 bp GAGGAATTACCAAGGTTGTGGTGGGTTATTTACTCTGGAAATATCTaGGTCACACTGTCCGTGGCAAAAGCGGAAAGCCTAGCTTATGTG +
Preference number: 2 (lower is better)
Translates to: EELPRLWWVIYSGNI*VTLSVAKAESLAYV
Trigger: CACATAAGCTAGGCTTTCCGCTTTTGCCACGGACAGTGTGACCAAGATATTTCCAGAGTAAATAACCCACCACAACCTTGGTAATTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR TCA 90 bp ATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTATGTGTTCTGTGGCTaGCCAGAAGGTTTTGGTGTC +
Preference number: 2 (lower is better)
Translates to: MSVFCMCSVADQKVLVSHYVFCG*PEGFGV
Trigger: GACACCAAAACCTTCTGGTCAGCCACAGAACACATA...GTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
3UTR-3UTR CCA 90 bp CCTGAATCCCAATGTATCCGTTACCTTTACAAGAAACTGGTGTGGTTCTTGTCTGCCCAGGAAGGTATTTaGGCTGGACAAAGTGATAGC +
Preference number: 2 (lower is better)
Translates to: PESQCIRYLYKKLVWFLSAQEGI*AGQSDS
Trigger: GCTATCACTTTGTCCAGCCCAAATACCTTCCTGGGC...AGACAAGAACCACACCAGTTTCTTGTAAAGGTAACGGATACATTGGGATTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CCA 90 bp CTACCAGTTTATTGGGCCCTAGTGAGTCCCAAGATTTCCATCTACCAGTTGCTTGTCTCTGTCCAAATGTaGGCAAGATCAAACTGCAAC +
Preference number: 2 (lower is better)
Translates to: LPVYWALVSPKISIYQLLVSVQM*ARSNCN
Trigger: GTTGCAGTTTGATCTTGCCCACATTTGGACAGAGAC...AAGCAACTGGTAGATGGAAATCTTGGGACTCACTAGGGCCCAATAAACTGGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR-3UTR TCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGTATGTGTTCTGTGGCTaGCCAGAAGGTTTTGGTGTC +
Preference number: 2 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKYVFCG*PEGFGV
Trigger: GACACCAAAACCTTCTGGTCAGCCACAGAACACATA...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
3UTR-3UTR CCA 90 bp AGAAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCTGACCAGAAGGTTTTaGTGTCACACTAAGAAGGCT +
Preference number: 2 (lower is better)
Translates to: RKYNATGLHMSISSTTISLTRRF*CHTKKA
Trigger: AGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAG...GGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR GCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCTGTGGGTTGAACCTCTaGCCATCCTTTAGTGCTGAC +
Preference number: 2 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTCGLNL*PSFSAD
Trigger: GTCAGCACTAAAGGATGGGCAGAGGTTCAACCCACA...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR CCA 90 bp CCTGAGCAGGATGACTTAAACCTGATCAATTCTACTCCAAAACAGCAACTATCAAATCCTTACAAGTTCTaGGGCTGGACCTCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: PEQDDLNLINSTPKQQLSNPYKF*GWTSVS
Trigger: TGACACAGAGGTCCAGCCCCAGAACTTGTAAGGATT...TGATAGTTGCTGTTTTGGAGTAGAATTGATCAGGTTTAAGTCATCCTGCTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR GCA 90 bp AAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCATGTAAAACCAAAGGCTaGAACTGTGAACAAATGTGG +
Preference number: 2 (lower is better)
Translates to: KVQCHWATYVHIIHHHFPCKTKG*NCEQMW
Trigger: CCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACA...TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR CCA 90 bp CCATCATTATCTACAATAGAAATGACTCAAGCCCTAGCATGTAATCTCTTAGGGTTTTCTGCTCTAACATaGGTCCCACGGACCTATCAG +
Preference number: 2 (lower is better)
Translates to: PSLSTIEMTQALACNLLGFSALT*VPRTYQ
Trigger: CTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAA...CCCTAAGAGATTACATGCTAGGGCTTGAGTCATTTCTATTGTAGATAATGATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CAA 90 bp TTCCTCAAAGGACAAATGAGGAGACTGAAGGCTACATTTCCTCCTTaGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGTTTCTG +
Preference number: 2 (lower is better)
Translates to: FLKGQMRRLKATFPP*RTIRECLQLYNRFL
Trigger: CAGAAACCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGCCTTCAGTCTCCTCATTTGTCCTTTGAGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR GCA 90 bp GAAAAGAGTCCTTCTGCTTTCGCTTCCTGGAGCTTAAGAAGAAAAGAGGAATTAACCGTGCCTGGCCAATaGCAATTTTTGAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: EKSPSAFASWSLRRKEELTVPGQ*QFLKTD
Trigger: ATCTGTTTTCAAAAATTGGCATTGGCCAGGCACGGT...TAATTCCTCTTTTCTTCTTAAGCTCCAGGAAGCGAAAGCAGAAGGACTCTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CCA 90 bp CTGAAGGCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAAGTGGTCTAATGAATaGGCCTTCAGAAGCAAAGTG +
Preference number: 2 (lower is better)
Translates to: LKATFPPLRTIRECLQLYKWSNE*AFRSKV
Trigger: CACTTTGCTTCTGAAGGCCCATTCATTAGACCACTT...GTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGCCTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR CCA 90 bp CCTGAGCAGGATGACTTAAACCTGATCAATTCTACTCCAAAACAGCAACTATCAAACCTCAGAAAAATATaGGGTCACCACATGGGCTTT +
Preference number: 2 (lower is better)
Translates to: PEQDDLNLINSTPKQQLSNLRKI*GHHMGF
Trigger: AAAGCCCATGTGGTGACCCCATATTTTTCTGAGGTT...TGATAGTTGCTGTTTTGGAGTAGAATTGATCAGGTTTAAGTCATCCTGCTCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCAAAGTACAATGCCACTaGGCTACATATGTCCATATC +
Preference number: 2 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTKVQCH*ATYVHI
Trigger: GATATGGACATATGTAGCCCAGTGGCATTGTACTTT...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR CAA 90 bp TGGACTTTGTATCAGGCACTTAAATTGTTGGAGAGACATGCCGTTTaGAACCAAAGATATAAAAACTGGGTTGGAGTAATCTTTACAAGT +
Preference number: 2 (lower is better)
Translates to: WTLYQALKLLERHAV*NQRYKNWVGVIFTS
Trigger: ACTTGTAAAGATTACTCCAACCCAGTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTCCAACAATTTAAGTGCCTGATACAAAGTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR GCA 72 bp TTCTGCTCTAACATGGGTCCCACGGACCTATCAGTCTaGTCTGGGGTGCTGACCTGCTGGGTCCTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: FCSNMGPTDLSV*SGVLTCWVLSR
Trigger: CCTGCTCAGGACCCAGCAGGTCAGCACCCCAGAGCAGACTGATAGGTCCGTGGGACCCATGTTAGAGCAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR GCA 72 bp AAGGCTCTGGGGTGTGGCACACCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGCCAAACATCTTCACCA +
Preference number: 3 (lower is better)
Translates to: KALGCGTPTARG*PDPRWSQTSSP
Trigger: TGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
3UTR CCA 72 bp GGCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCAGCTGTTCCTCATAGT +
Preference number: 3 (lower is better)
Translates to: GTPTARGCPDPR*SQTSSPAVPHS
Trigger: ACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438535.1
3UTR GCA 72 bp CAACACATGCTCCTCTCCATGAGGCTCAACCGTCAGTaGAGGGCTTGCCTGATGTGGACAATGTGGATACCT +
Preference number: 3 (lower is better)
Translates to: QHMLLSMRLNRQ*RACLMWTMWIP
Trigger: AGGTATCCACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
3UTR-3UTR CAA 90 bp CCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGCCGTCAGTGCAGGGCTaGCCTGATGTGGACAATGTG +
Preference number: 3 (lower is better)
Translates to: PFLQRIQPREESGWHKLGPSVQG*PDVDNV
Trigger: CACATTGTCCACATCAGGCAAGCCCTGCACTGACGG...CCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
3UTR CCA 72 bp TTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTaGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: FLQRIQPREESG*HKLGAKRKALR
Trigger: CCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
3UTR CCA 72 bp GGTCCTAGATTTCATATGCTCCCACAGTTGGCCCTTTaGTACAGGCAGGTGTCTCTGTCCAAATGTGGGCAA +
Preference number: 3 (lower is better)
Translates to: GPRFHMLPQLAL*YRQVSLSKCGQ
Trigger: TTGCCCACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR GCA 72 bp AAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTaGAGCTGTCAGCAGAAAGTACAATGCCACTGGGCT +
Preference number: 3 (lower is better)
Translates to: KHHCGFGDSCNV*SCQQKVQCHWA
Trigger: AGCCCAGTGGCATTGTACTTTCTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR GCA 72 bp TTCCATCTACCAGTTGCTTGGGTCCTAGATTTCATATaGTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGT +
Preference number: 3 (lower is better)
Translates to: FHLPVAWVLDFI*SHSWPFGTGRC
Trigger: ACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACCCAAGCAACTGGTAGATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR CCA 72 bp GTTGCTTGGGTCCTAGATTTCATATGCTCCCACAGTTaGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAAT +
Preference number: 3 (lower is better)
Translates to: VAWVLDFICSHS*PFGTGRCLCPN
Trigger: ATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACCCAAGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR-3UTR CAA 90 bp CCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGCAGGCACTTAAATTGTaGGAGAGACATGCCGTTTTG +
Preference number: 3 (lower is better)
Translates to: PKHHCGFGDSCNVCSCQQQALKL*ERHAVL
Trigger: CAAAACGGCATGTCTCTCCAACAATTTAAGTGCCTG...CTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR TCA 72 bp TTTGGAAAGCTGCAATGTAGGCTACAGAGGGCAGTCTaGAAAGAGTCCTTCTGCTTTCGCTTCCTGGAGCTT +
Preference number: 3 (lower is better)
Translates to: FGKLQCRLQRAV*KESFCFRFLEL
Trigger: AAGCTCCAGGAAGCGAAAGCAGAAGGACTCTTTTCAGACTGCCCTCTGTAGCCTACATTGCAGCTTTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR TCA 72 bp ACTATCATTAAGTCAGGGGTGTCAAGGAGGACTCTGTaGAGGCAAAGACTAGACTGGGATGTGTGCGAGAGT +
Preference number: 3 (lower is better)
Translates to: TIIKSGVSRRTL*RQRLDWDVCES
Trigger: ACTCTCGCACACATCCCAGTCTAGTCTTTGCCTTCACAGAGTCCTCCTTGACACCCCTGACTTAATGATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR TCA 72 bp TACCTCAGCCCTGAGTTGAACTTGGCATGCCACCTTTaGTTCCCCATGCTGCAAAAAGAATTGGAACGCTGT +
Preference number: 3 (lower is better)
Translates to: YLSPELNLACHL*FPMLQKELERC
Trigger: ACAGCGTTCCAATTCTTTTTGCAGCATGGGGAATCAAAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CAA 90 bp TCCCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCTATCAGGCACTTAAATaGTTGGAGAGACATGCCGTT +
Preference number: 3 (lower is better)
Translates to: SLSITVGLETAVMCAAVSYQALK*LERHAV
Trigger: AACGGCATGTCTCTCCAACAATTTAAGTGCCTGATA...GCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR CAA 90 bp TCCCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCGAGCATGTTTATACTTaGGACTTTGTATCAGGCACT +
Preference number: 3 (lower is better)
Translates to: SLSITVGLETAVMCAAVSEHVYT*DFVSGT
Trigger: AGTGCCTGATACAAAGTCCAAAGTATAAACATGCTC...GCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR-3UTR CAA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGAAACTGGTGTGGTTCTaGTCTGCTAAGGGCAAGACC +
Preference number: 3 (lower is better)
Translates to: HEPFLQRIQPREESGWHKKLVWF*SAKGKT
Trigger: GGTCTTGCCCTTAGCAGACAAGAACCACACCAGTTT...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR GCA 72 bp AGCTGTAATGTGTGCAGCTGTCAGCAGAAAGTACAATaGCACTGGGCTACATATGTCCATATCATCCACCAC +
Preference number: 3 (lower is better)
Translates to: SCNVCSCQQKVQ*HWATYVHIIHH
Trigger: GTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCTGCTGACAGCTGCACACATTACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR GCA 72 bp CTTTCCAGCATACTGCCATCAGCTAGTAGAGGCAACTaGAAACAAATGGTAGGAGTTGCCCAGGAAGGTATT +
Preference number: 3 (lower is better)
Translates to: LSSILPSASRGN*KQMVGVAQEGI
Trigger: AATACCTTCCTGGGCAACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGCTGATGGCAGTATGCTGGAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR CCA 72 bp CCATGCTGCAAAAAGAATTGGAACGCTGTCAGGTCCTaGCACCGTGGTAATGGCTATATCCTATTTCACTCA +
Preference number: 3 (lower is better)
Translates to: PCCKKNWNAVRS*HRGNGYILFHS
Trigger: TGAGTGAAATAGGATATAGCCATTACCACGGTGCCAGGACCTGACAGCGTTCCAATTCTTTTTGCAGCATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CCA 72 bp ACGGGCAATCAGAGGATAAACATAACCTCTCCTGGCTaGAGAACCATTTCTTGCGACTTTGCTGCTGAATTC +
Preference number: 3 (lower is better)
Translates to: TGNQRINITSPG*RTISCDFAAEF
Trigger: GAATTCAGCAGCAAAGTCGCAAGAAATGGTTCTCCAGCCAGGAGAGGTTATGTTTATCCTCTGATTGCCCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CCA 72 bp AACACGGAATCTACCCTTTGCTCAAGGTGGGCTAAATaGTTTTACGCAAACCCCTCCATGAGGTTAGTGACA +
Preference number: 3 (lower is better)
Translates to: NTESTLCSRWAK*FYANPSMRLVT
Trigger: TGTCACTAACCTCATGGAGGGGTTTGCGTAAAACCATTTAGCCCACCTTGAGCAAAGGGTAGATTCCGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CAA 90 bp TCCCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCGAGAGACATGCCGTTTaGAACCAAAGATATAAAAAC +
Preference number: 3 (lower is better)
Translates to: SLSITVGLETAVMCAAVSERHAV*NQRYKN
Trigger: GTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTC...GCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR TCA 72 bp AACGTTTCCTGGCTCTCTACTAACAGTAAAATGTGCTaGGCCCAAATTTTCTGCTCTAACATGGGTCCCACG +
Preference number: 3 (lower is better)
Translates to: NVSWLSTNSKMC*AQIFCSNMGPT
Trigger: CGTGGGACCCATGTTAGAGCAGAAAATTTGGGCTCAGCACATTTTACTGTTAGTAGAGAGCCAGGAAACGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR TCA 72 bp CTTACAAGTTCTGGGGCTGGACCTCTGTGTCACTCCTaGATCCCAATGTATCCGTTACCTTTACAAGAAACT +
Preference number: 3 (lower is better)
Translates to: LTSSGAGPLCHS*IPMYPLPLQET
Trigger: AGTTTCTTGTAAAGGTAACGGATACATTGGGATTCAGGAGTGACACAGAGGTCCAGCCCCAGAACTTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR GCA 72 bp TCATCCACCACCATTTCCCACTGTAAAACCAAAGGCTaGAACTGTGAACAAATGTGGACTTCCTCAAAGGAC +
Preference number: 3 (lower is better)
Translates to: SSTTISHCKTKG*NCEQMWTSSKD
Trigger: GTCCTTTGAGGAAGTCCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACAGTGGGAAATGGTGGTGGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR CCA 72 bp AATGTGTGCAGCTGTCAGCAGAAAGTACAATGCCACTaGGCTACATATGTCCATATCATCCACCACCATTTC +
Preference number: 3 (lower is better)
Translates to: NVCSCQQKVQCH*ATYVHIIHHHF
Trigger: GAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCTGCTGACAGCTGCACACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
3UTR CCA 72 bp GGGCAGTCTGAAAAGAGTCCTTCTGCTTTCGCTTCCTaGAGCTTAAGAAGAAAAGAGGAATTACCAAGGTTG +
Preference number: 3 (lower is better)
Translates to: GQSEKSPSAFAS*SLRRKEELPRL
Trigger: CAACCTTGGTAATTCCTCTTTTCTTCTTAAGCTCCAGGAAGCGAAAGCAGAAGGACTCTTTTCAGACTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CCA 72 bp ATCTGCTCAGTGTTCAAACAAAATCCTTACAAGTTCTaGGGCTGGACCTCTGTGTCACTCCTGAATCCCAAT +
Preference number: 3 (lower is better)
Translates to: ICSVFKQNPYKF*GWTSVSLLNPN
Trigger: ATTGGGATTCAGGAGTGACACAGAGGTCCAGCCCCAGAACTTGTAAGGATTTTGTTTGAACACTGAGCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR TCA 72 bp TTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTaGCCAGAAGGTTTTGGTGTCACACTAAGAAGGCTC +
Preference number: 3 (lower is better)
Translates to: FCHVCFLYVFCG*PEGFGVTLRRL
Trigger: GAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
3UTR TCA 72 bp TCCTGGCTGGAGAACCATTTCTTGCGACTTTGCTGCTaGATTCACTCATTAAACTGCTCAAAGGAAAAGCTC +
Preference number: 3 (lower is better)
Translates to: SWLENHFLRLCC*IHSLNCSKEKL
Trigger: GAGCTTTTCCTTTGAGCAGTTTAATGAGTGAATTCAGCAGCAAAGTCGCAAGAAATGGTTCTCCAGCCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR GCA 72 bp CCAACAGCACCTCTCACTGAATACGATATCACTGTGTaGAGAGAAAACGGGCAATCAGAGGATAAACATAAC +
Preference number: 3 (lower is better)
Translates to: PTAPLTEYDITV*RENGQSEDKHN
Trigger: GTTATGTTTATCCTCTGATTGCCCGTTTTCTCTGCACACAGTGATATCGTATTCAGTGAGAGGTGCTGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CAA 90 bp CCATCATTATCTACAATAGAAATGACTCAAGCCCTAGCATGTAATCTCTTAGGGCAGGCACTTAAATTGTaGGAGAGACATGCCGTTTTG +
Preference number: 3 (lower is better)
Translates to: PSLSTIEMTQALACNLLGQALKL*ERHAVL
Trigger: CAAAACGGCATGTCTCTCCAACAATTTAAGTGCCTG...CCCTAAGAGATTACATGCTAGGGCTTGAGTCATTTCTATTGTAGATAATGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR-3UTR CAA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGATGAGCTCTAATTCATaGAAGAGAACACCACAAAAC +
Preference number: 3 (lower is better)
Translates to: HEPFLQRIQPREESGWHKMSSNS*KRTPQN
Trigger: GTTTTGTGGTGTTCTCTTCAATGAATTAGAGCTCAT...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
3UTR CCA 72 bp GAGAGACATGCCGTTTTGAACCAAAGATATAAAAACTaGGTTGGAGTAATCTTTACAAGTGGTCTAATGAAT +
Preference number: 3 (lower is better)
Translates to: ERHAVLNQRYKN*VGVIFTSGLMN
Trigger: ATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp TGGAGTCTTGCACTGTCACCCGGGGTGGAATACAATGGTGCAATCTCGGCTCACGGCTCTGGCGTGGGGTaGCGGCGGGCAGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: WSLALSPGVEYNGAISAHGSGVG*RRAGLR
Trigger: CCTCAGTCCTGCCCGCCGCCACCCCACGCCAGAGCC...GTGAGCCGAGATTGCACCATTGTATTCCACCCCGGGTGACAGTGCAAGACTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp AGGCTCTGGGGTGTGGCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTGGACAGCAATGGCAGCAGTaGCGGCAACGGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: RLWGVAHLLPEVAQIHAGQQWQQ*RQRQEQ
Trigger: CTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTG...TCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR GCA 90 bp GCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTGGAGCCAAACATCTTCACCCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: AHLLPEVAQIHAGAKHLHPTARG*PDPRWS
Trigger: GCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGG...GTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR CCA 90 bp CCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGACTCGCTGTCCCCTTTaGCGTCGGCGACACGGTCCG +
Preference number: 4 (lower is better)
Translates to: PLHEAQPSVQGLPDVDNVTRCPL*RRRHGP
Trigger: CGGACCGTGTCGCCGACGCCAAAGGGGACAGCGAGT...CACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
3UTR CAA 72 bp GAAGGCTCTGGGGTGTGGCACACCTACTGCCCGAGGTaGCCCAGATCCACGCTGGAGCCAAACATCTTCACC +
Preference number: 4 (lower is better)
Translates to: EGSGVWHTYCPR*PRSTLEPNIFT
Trigger: GGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR GCA 90 bp TGGCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTGGAGCCAAACATCTTCGTGTGGCACACCTACTaGCCGAGGTTGCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: WHTYCPRLPRSTLEPNIFVWHTY*PRLPRS
Trigger: GGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACAC...GAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR CCA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCACTCGCTGTCCCCTTTaGCGTCGGCGACACGGTCCG +
Preference number: 4 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSTRCPL*RRRHGP
Trigger: CGGACCGTGTCGCCGACGCCAAAGGGGACAGCGAGT...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AGGCTCTGGGGTGTGGCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTGGATGCCCAGATCCACGCTaGAGCCAAACATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RLWGVAHLLPEVAQIHAGCPDPR*SQTSSP
Trigger: TGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCA...TCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR CCA 90 bp GAAGGCTCTGGGGTGTGGCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTGAGCAAAGTGGAGGTGTaGGTTGAACCTCTGCCCATC +
Preference number: 4 (lower is better)
Translates to: EGSGVWHTYCPRLPRSTLSKVEV*VEPLPI
Trigger: GATGGGCAGAGGTTCAACCCACACCTCCACTTTGCT...CAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR TCA 90 bp AGAAGGCTCTGGGGTGTGGCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTAGATGTTCCTCTTCATaGTGTCCATGCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: RRLWGVAHLLPEVAQIHARCSSS*CPCRAP
Trigger: TGGGGCCCTGCATGGACATCATGAAGAGGAACATCT...AGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR GCA 90 bp AGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATCTCTTTGGCCGGCTCTaGGTTTCCGGGCCGCGCAAC +
Preference number: 4 (lower is better)
Translates to: REESGWHKLGAKRKALRNLFGRL*VSGPRN
Trigger: GTTGCGCGGCCCGGAAACGCAGAGCCGGCCAAAGAG...ATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp ATAACCACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTACGAGGTCAGGCGGCTaGTGTCGCAGCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: ITTAMAAVAATAGTVLSCTRSGG*CRSTST
Trigger: GGTGGAGGTGCTGCGACAGCAGCCGCCTGACCTCGT...ACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTGGTTAT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTGGGCAACCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LPQLALWYRQVSLSKCGQPTARG*PDPRWS
Trigger: GCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGG...TTGCCCACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR GCA 90 bp GCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGTGGCACACCTACTaGCCGAGGTTGCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: APLHEAQPSVQGLPDVDNVWHTY*PRLPRS
Trigger: GGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACAC...ATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCGCTGTGTGCCCAGGGTaGTGCTGGGTGCCAACAGCA +
Preference number: 4 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSAVCPG*CWVPTA
Trigger: TGCTGTTGGCACCCAGCAGCACCCTGGGCACACAGC...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp TCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCACGTCGCGCCGCTCTTTaGCCGGCTCTGCGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: SFREFNQEKRVGGISWGPRRAAL*PALRFR
Trigger: CCGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACG...TGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp CACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTCTGTTGAAGGCTCTGGGGTGTaGCACACCTACTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: HSNGSSGGNGRNSSVMSVEGSGV*HTYCPR
Trigger: CCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCTTC...AACAGACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR GCA 90 bp TCCCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCCTCTTTGGCCGGCTCTaGGTTTCCGGGCCGCGCAAC +
Preference number: 4 (lower is better)
Translates to: SLSITVGLETAVMCAAVSLFGRL*VSGPRN
Trigger: GTTGCGCGGCCCGGAAACGCAGAGCCGGCCAAAGAG...GCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp GCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATAGGCTCAACCGTCAGTaGAGGGCTTGCCTGATGTGG +
Preference number: 4 (lower is better)
Translates to: APLHEAQPSVQGLPDVDNRLNRQ*RACLMW
Trigger: CCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCT...ATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCCAGGGTGCTGCTGGGTaGCAACAGCACCTCTCACTG +
Preference number: 4 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSQGAAG*QQHLSL
Trigger: CAGTGAGAGGTGCTGTTGGCACCCAGCAGCACCCTG...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp TGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCATCCAAGCCCCGGCGGGATCTaGATGTGGCTCATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: WHKLGAKRKALRNILYHPSPGGI*MWLMPA
Trigger: CGCCGGCATGAGCCACATCCAGATCCCGCCGGGGCT...TGGATGGTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp CCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGACATGCTCCTCTCCATaGGGCTCAACCGTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: PLHEAQPSVQGLPDVDNVTCSSP*GSTVSA
Trigger: TGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGT...CACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp CCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGAGCTCTCCAAAGTACTaGCCCTTATGGCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PLHEAQPSVQGLPDVDNVSSPKY*PLWQRA
Trigger: TGCCCGCTGCCATAAGGGGCAGTACTTTGGAGAGCT...CACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp CACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTCTGTTAGGCTCAACCGTCAGTaGAGGGCTTGCCTGATGTGG +
Preference number: 4 (lower is better)
Translates to: HSNGSSGGNGRNSSVMSVRLNRQ*RACLMW
Trigger: CCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCT...AACAGACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp TCTGGGGTGTGGCACACCTACTGCCCGAGGTTGCCCAGATCCACGCTGGAGCCACAGAAGCCTCTCGAATaGTTGTACATCCATAACCTG +
Preference number: 4 (lower is better)
Translates to: SGVWHTYCPRLPRSTLEPQKPLE*LYIHNL
Trigger: CAGGTTATGGATGTACAAGCATTCGAGAGGCTTCTG...TGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACACCCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR CCA 90 bp AAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCAGGCTCTGGCGTGGGGTaGCGGCGGGCAGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: KVQCHWATYVHIIHHHFPGSGVG*RRAGLR
Trigger: CCTCAGTCCTGCCCGCCGCCACCCCACGCCAGAGCC...TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGGGCTCTGGCGTGGGGTaGCGGCGGGCAGGACTGAGG +
Preference number: 4 (lower is better)
Translates to: HEPFLQRIQPREESGWHKGSGVG*RRAGLR
Trigger: CCTCAGTCCTGCCCGCCGCCACCCCACGCCAGAGCC...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp TCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAGAAGGCTCTGGGGTGTaGCACACCTACTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: SFREFNQEKRVGGISWGPEGSGV*HTYCPR
Trigger: CCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCTTC...TGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTCCTCGCGCAGGCGGGTaGAGTACTCCACTGCGAATT +
Preference number: 4 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCPRAGG*STPLRI
Trigger: AATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGG...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp GTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGCTCTTTGGCCGGCTCTaGGTTTCCGGGCCGCGCAAC +
Preference number: 4 (lower is better)
Translates to: VCVLWLTRRFWCHTKKALLFGRL*VSGPRN
Trigger: GTTGCGCGGCCCGGAAACGCAGAGCCGGCCAAAGAG...CAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGGGCGGGATCTGGATGTaGCTCATGCCGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: HEPFLQRIQPREESGWHKGGIWM*LMPAAA
Trigger: GGCCGCCGCCGGCATGAGCCACATCCAGATCCCGCC...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp TCCAGCATACTGCCATCAGCTAGTAGAGGCAACTGCAAACAAATGGTAGGAGTTAGCCCCGGCGGGATCTaGATGTGGCTCATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: SSILPSASRGNCKQMVGVSPGGI*MWLMPA
Trigger: CGCCGGCATGAGCCACATCCAGATCCCGCCGGGGCT...AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGCTGATGGCAGTATGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGACTCGCTGTCCCCTTTaGCGTCGGCGACACGGTCCG +
Preference number: 4 (lower is better)
Translates to: VCVLWLTRRFWCHTKKALTRCPL*RRRHGP
Trigger: CGGACCGTGTCGCCGACGCCAAAGGGGACAGCGAGT...CAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp ATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTGGGAAGTACTGCCCCTTATaGCAGCGGGCAATCTCGACC +
Preference number: 4 (lower is better)
Translates to: MLPQLALWYRQVSLSKCGKYCPL*QRAIST
Trigger: GGTCGAGATTGCCCGCTGCCATAAGGGGCAGTACTT...CCCACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CCA 90 bp CTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGGTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LSMRLNRQCRACLMWTMWCPDPR*SQTSSP
Trigger: TGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCA...CCACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp GATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCCTTTGTCCCCCAGACTaGAGTGCAGTGGCACGATCA +
Preference number: 4 (lower is better)
Translates to: DLFPTHAPLHEAQPSVQGLCPPD*SAVARS
Trigger: TGATCGTGCCACTGCACTCCAGTCTGGGGGACAAAG...GCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp GCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATAACGCTGTCAGGTCCTaGCACCGTGGTAATGGCTAT +
Preference number: 4 (lower is better)
Translates to: APLHEAQPSVQGLPDVDNNAVRS*HRGNGY
Trigger: ATAGCCATTACCACGGTGCCAGGACCTGACAGCGTT...ATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GGGCTACATATGTCCATATCATCCACCACCATTTCCCACTGTAAAACCAAAGGCTCTGGATGTGGCTCATaGCGGCGGCGGCCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GLHMSISSTTISHCKTKGSGCGS*RRRPKG
Trigger: TCCCTTCGGCCGCCGCCGGCATGAGCCACATCCAGA...GCCTTTGGTTTTACAGTGGGAAATGGTGGTGGATGATATGGACATATGTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACTCCCCCAGACTGGAGTaGAGTGGCACGATCATGGCT +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYSPRLE*SGTIMA
Trigger: AGCCATGATCGTGCCACTGCACTCCAGTCTGGGGGA...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCGATTCCCCATGCTACTaGCCGAGGTTGCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFDSPCY*PRLPRS
Trigger: GGATCTGGGCAACCTCGGGCAGTAGCATGGGGAATC...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS-3UTR GCA 90 bp TGGGTCCTAGATTTCATATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCCTTTGGTCACCTACTaGCCGAGGTTGCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: WVLDFICSHSWPFGTGRCPLVTY*PRLPRS
Trigger: GGATCTGGGCAACCTCGGGCAGTAGGTGACCAAAGG...ACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CCA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGAGCCCCGGCGGGATCTaGATGTGGCTCATGCCGGCG +
Preference number: 4 (lower is better)
Translates to: HEPFLQRIQPREESGWHKSPGGI*MWLMPA
Trigger: CGCCGGCATGAGCCACATCCAGATCCCGCCGGGGCT...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp GATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: DLFPTHAPLHEAQPSVQGCPDPR*SQTSSP
Trigger: TGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCA...GCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp CTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTGGGCAATGCCCAGATCCACGCTaGAGCCAAACATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: LPQLALWYRQVSLSKCGQCPDPR*SQTSSP
Trigger: TGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCA...TTGCCCACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CCA 90 bp TTCCACCTCAGCCTCCTAAGTATTTGGGACTACATGCATGCATCACCACACCTGCAGCAATGGCAGCAGTaGCGGCAACGGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: FHLSLLSIWDYMHASPHLQQWQQ*RQRQEQ
Trigger: CTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTG...CAGGTGTGGTGATGCATGCATGTAGTCCCAAATACTTAGGAGGCTGAGGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp ATAACCACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTGGATGTGTGCGAGAGTaGGATAAGAAGGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: ITTAMAAVAATAGTVLSCGCVRE*DKKAHP
Trigger: GGGATGGGCCTTCTTATCCCACTCTCGCACACATCC...ACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTGGTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp CTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGGCCTTTTCACCCTGAGTaGTTATGCGTTCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LSMRLNRQCRACLMWTMWPFHPE*LCVLHP
Trigger: AGGATGGAGAACGCATAATCACTCAGGGTGAAAAGG...CCACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TCCCACTGTAAAACCAAAGGCTGCAACTGTGAACAAATGTGGACTTCCTCAAAGCTGGTCTTGAACCCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: SHCKTKGCNCEQMWTSSKLVLNP*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGGGTTCAAGACCAG...CTTTGAGGAAGTCCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACAGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp CTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGCTACAGAGGGCAGTCTaGAAAGAGTCCTTCTGCTTT +
Preference number: 4 (lower is better)
Translates to: LLSMRLNRQCRACLMWTMLQRAV*KESFCF
Trigger: AAAGCAGAAGGACTCTTTTCAGACTGCCCTCTGTAG...CATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACACATGCTCCTCTCCATaGGGCTCAACCGTCAGTGCA +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYTCSSP*GSTVSA
Trigger: TGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGT...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCATTGGCATGCCACCTTTaGTTCCCCATGCTACTGCCC +
Preference number: 4 (lower is better)
Translates to: SFREFNQEKRVGGISWGPLACHL*FPMLLP
Trigger: GGGCAGTAGCATGGGGAATCAAAGGTGGCATGCCAA...TGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS-3UTR GCA 90 bp TGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTTCTGGATGTGGCTCATaGCGGCGGCGGCCGAAGGGA +
Preference number: 4 (lower is better)
Translates to: CLFSVCVLWLTRRFWCHTSGCGS*RRRPKG
Trigger: TCCCTTCGGCCGCCGCCGGCATGAGCCACATCCAGA...AGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGACGAGGTCAGGCGGCTaGTGTCGCAGCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: LFSVCVLWLTRRFWCHTKTRSGG*CRSTST
Trigger: GGTGGAGGTGCTGCGACAGCAGCCGCCTGACCTCGT...CTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGAGCTCTCCAAAGTACTaGCCCTTATGGCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PKHHCGFGDSCNVCSCQQSSPKY*PLWQRA
Trigger: TGCCCGCTGCCATAAGGGGCAGTACTTTGGAGAGCT...CTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CATATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTAGCTCTCCAAAGTACTaGCCCTTATGGCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: HMLPQLALWYRQVSLSKCSSPKY*PLWQRA
Trigger: TGCCCGCTGCCATAAGGGGCAGTACTTTGGAGAGCT...ACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR GCA 90 bp ATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACCTGGGAGGCGGAGGTTaGGGTGAGCCAAGACCGCAC +
Preference number: 4 (lower is better)
Translates to: MSVFCMCSVADQKVLVSHLGGGG*GEPRPH
Trigger: GTGCGGTCTTGGCTCACCGCAACCTCCGCCTCCCAG...GTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCGTCAGTGCAGGGCTTaGCTGATGTGGACAATGTGG +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYRQCRA*LMWTMW
Trigger: CCACATTGTCCACATCAGGCAAGCCCTGCACTGACG...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp TCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAGTACTGCCCCTTATaGCAGCGGGCAATCTCGACC +
Preference number: 4 (lower is better)
Translates to: SFREFNQEKRVGGISWGPKYCPL*QRAIST
Trigger: GGTCGAGATTGCCCGCTGCCATAAGGGGCAGTACTT...TGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp TACAGGCAGGTGTCTCTGTCCAAATGTGGGCAAGATCAAACTGCAACAAGGCGCACAAGGCGCTTCCTTTaGTCACCTACTGCCCGAGGT +
Preference number: 4 (lower is better)
Translates to: YRQVSLSKCGQDQTATRRTRRFL*SPTARG
Trigger: ACCTCGGGCAGTAGGTGACCAAAGGAAGCGCCTTGT...GCGCCTTGTTGCAGTTTGATCTTGCCCACATTTGGACAGAGACACCTGCCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
3UTR CAA 72 bp CCTGAGCAGGGTCTTTCCCTAAGCATCACTGTGGGTTaGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PEQGLSLSITVG*ETAVMCAAVSR
Trigger: TCTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGAAAGACCCTGCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp CACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGCATGCTCATCAGCTTTaGCTATCCTTTCAAACATGG +
Preference number: 4 (lower is better)
Translates to: HMLLSMRLNRQCRACLMWHAHQL*LSFQTW
Trigger: CCATGTTTGAAAGGATAGTCAAAGCTGATGAGCATG...CCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp CATATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTAGATGTTCCTCTTCATaGTGTCCATGCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: HMLPQLALWYRQVSLSKCRCSSS*CPCRAP
Trigger: TGGGGCCCTGCATGGACATCATGAAGAGGAACATCT...ACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR TCA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCGGAAAAGCTCTACCCTaGTTTCTGAGAGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSGKALP*FLRVYS
Trigger: GCTGTAGACTCTCAGAAATCAGGGTAGAGCTTTTCC...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GAAGAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCACGAGGTCAGGCGGCTaGTGTCGCAGCACCTCCACC +
Preference number: 4 (lower is better)
Translates to: EENTTKQLTKGSLSNTCSTRSGG*CRSTST
Trigger: GGTGGAGGTGCTGCGACAGCAGCCGCCTGACCTCGT...GGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTGGTGAAGTACTCCACTaGGAATTCGACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCGEVLH*EFDEVR
Trigger: CCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACC...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCGGTGAAGTACTCCACTaGGAATTCGACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFGEVLH*EFDEVR
Trigger: CCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACC...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp TCCCACTGTAAAACCAAAGGCTGCAACTGTGAACAAATGTGGACTTCCTCAAAGCCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SHCKTKGCNCEQMWTSSKPTARG*PDPRWS
Trigger: GCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGG...CTTTGAGGAAGTCCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACAGTGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp GTTGCCCAGATCCACGCTGGAGCCAAACATCTTCACCAGCTGTTCCTCATAGTGTGTGGGTTGAACCTCTaGCCATCCTTTAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: VAQIHAGAKHLHQLFLIVCGLNL*PSFSAD
Trigger: GTCAGCACTAAAGGATGGGCAGAGGTTCAACCCACA...CACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR GCA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTACGATCATGGCTCACTaGAGCTTCAGTCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCTIMAH*SFSLPG
Trigger: ACCTGGGAGACTGAAGCTGCAGTGAGCCATGATCGT...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp CTGAAGGCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACCGTCGCGCCGCTCTTTaGCCGGCTCTGCGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: LKATFPPLRTIRECLQLYRRAAL*PALRFR
Trigger: CCGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACG...GTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGCCTTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGCGTCGCGCCGCTCTTTaGCCGGCTCTGCGTTTCCGG +
Preference number: 4 (lower is better)
Translates to: ATFPPLRTIRECLQLYNRRRAAL*PALRFR
Trigger: CCGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACG...CCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCGGCGGGATCTGGATGTaGCTCATGCCGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTGGIWM*LMPAAA
Trigger: GGCCGCCGCCGGCATGAGCCACATCCAGATCCCGCC...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp ATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACGAAGGCTCTGGGGTGTaGCACACCTACTGCCCGAGG +
Preference number: 4 (lower is better)
Translates to: MSVFCMCSVADQKVLVSHEGSGV*HTYCPR
Trigger: CCTCGGGCAGTAGGTGTGCCACACCCCAGAGCCTTC...GTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR CCA 90 bp ATAACCACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTGCCCAGGAAGGTATTTaGGCTGGACAAAGTGATAGC +
Preference number: 4 (lower is better)
Translates to: ITTAMAAVAATAGTVLSCAQEGI*AGQSDS
Trigger: GCTATCACTTTGTCCAGCCCAAATACCTTCCTGGGC...ACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTGGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp CACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTCTGTTAATCCTTACAAGTTCTaGGGCTGGACCTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: HSNGSSGGNGRNSSVMSVNPYKF*GWTSVS
Trigger: TGACACAGAGGTCCAGCCCCAGAACTTGTAAGGATT...AACAGACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp AAATTTTCTGCTCTAACATGGGTCCCACGGACCTATCAGTCTGCTCTGGGGTGCTTGCCCAGGATGGTTTaGAACTCCTGGGCTCAAGCA +
Preference number: 4 (lower is better)
Translates to: KFSALTWVPRTYQSALGCLPRMV*NSWAQA
Trigger: TGCTTGAGCCCAGGAGTTCCAAACCATCCTGGGCAA...GCACCCCAGAGCAGACTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCAGAGAAGAGAGTGGGTaGCATAAGCTGGGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFREESG*HKLGAK
Trigger: TTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCT...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp GATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTCTTTGCAAGCTTCCTaGAGTCTGCATCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: DLFPTHAPLHEAQPSVQGSLQAS*SLHLCS
Trigger: TGAACAGAGATGCAGACTTCAGGAAGCTTGCAAAGA...GCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCATCCACCAAAGGGAGCCTTCTaGGGTAGCAACAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: WHKLGAKRKALRNILYHPPKGAF*GSNNGS
Trigger: GCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGG...TGGATGGTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TTCCACCTCAGCCTCCTAAGTATTTGGGACTACATGCATGCATCACCACACCTGAGATGTTCCTCTTCATaGTGTCCATGCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: FHLSLLSIWDYMHASPHLRCSSS*CPCRAP
Trigger: TGGGGCCCTGCATGGACATCATGAAGAGGAACATCT...CAGGTGTGGTGATGCATGCATGTAGTCCCAAATACTTAGGAGGCTGAGGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp GTTGCCCAGATCCACGCTGGAGCCAAACATCTTCACCAGCTGTTCCTCATAGTGTATGTGTTCTGTGGCTaGCCAGAAGGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: VAQIHAGAKHLHQLFLIVYVFCG*PEGFGV
Trigger: GACACCAAAACCTTCTGGTCAGCCACAGAACACATA...CACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR TCA 90 bp GTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGCTGAGGTTGGGAGTTTaGGACCAGCCTGACCAACAC +
Preference number: 4 (lower is better)
Translates to: VCVLWLTRRFWCHTKKALLRLGV*DQPDQH
Trigger: GTGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCAG...CAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCAAGGAGGACTCTGTaGAGGCAAAGACTAGACTGG +
Preference number: 4 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFSRRTL*RQRLDW
Trigger: CCAGTCTAGTCTTTGCCTTCACAGAGTCCTCCTTGA...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp TTCCACCTCAGCCTCCTAAGTATTTGGGACTACATGCATGCATCACCACACCTGTGGATACCTCAGCCCTaGGTTGAACTTGGCATGCCA +
Preference number: 4 (lower is better)
Translates to: FHLSLLSIWDYMHASPHLWIPQP*VELGMP
Trigger: TGGCATGCCAAGTTCAACTCAGGGCTGAGGTATCCA...CAGGTGTGGTGATGCATGCATGTAGTCCCAAATACTTAGGAGGCTGAGGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATCCTTGGTCAATGACATaGTCATCAGCTTTGACTATC +
Preference number: 4 (lower is better)
Translates to: APLHEAQPSVQGLPDVDNPWSMT*SSALTI
Trigger: GATAGTCAAAGCTGATGAGCATGTCATTGACCAAGG...ATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTTGTGGGTTGAACCTCTaGCCATCCTTTAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCCGLNL*PSFSAD
Trigger: GTCAGCACTAAAGGATGGGCAGAGGTTCAACCCACA...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR GCA 90 bp CTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGGCTAGTAGAGGCAACTaGAAACAAATGGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: LLSMRLNRQCRACLMWTMASRGN*KQMVGV
Trigger: AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGC...CATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCTAGACTGGGATGTGTaGGAGAGTGGGATAAGAAGG +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYLDWDV*ESGIRR
Trigger: CCTTCTTATCCCACTCTCGCACACATCCCAGTCTAG...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTGTGTGCCCAGGGTGCTaGTGGGTGCCAACAGCACCT +
Preference number: 4 (lower is better)
Translates to: ENTTKQLTKGSLSNTCSSVCPGC*WVPTAP
Trigger: AGGTGCTGTTGGCACCCAGCAGCACCCTGGGCACAC...AGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GAAGAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCGCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: EENTTKQLTKGSLSNTCSATARG*PDPRWS
Trigger: GCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGC...GGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS-3UTR CCA 90 bp CCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGTATGGGGTCACCACATaGGCTTTCCCAGTGCTAGCT +
Preference number: 4 (lower is better)
Translates to: PFLQRIQPREESGWHKLGYGVTT*AFPVLA
Trigger: AGCTAGCACTGGGAAAGCCCATGTGGTGACCCCATA...CCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp CCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGTACAAGTTCTGGGGCTaGACCTCTGTGTCACTCCTG +
Preference number: 4 (lower is better)
Translates to: PFLQRIQPREESGWHKLGYKFWG*TSVSLL
Trigger: CAGGAGTGACACAGAGGTCCAGCCCCAGAACTTGTA...CCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp GAGGCATCTGCTCAGTGTTCAAACAAAATCCTTACAAGTTCTGGGGCTGGACCTCTCTGTTGCCCAGGATaGTTTGGAACTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: EASAQCSNKILTSSGAGPLCCPG*FGTPGL
Trigger: GAGCCCAGGAGTTCCAAACCATCCTGGGCAACAGAG...AGGTCCAGCCCCAGAACTTGTAAGGATTTTGTTTGAACACTGAGCAGATGCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp GGTCCTAGATTTCATATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCAGCTACCAGTTTATTaGGCCCTAGTGAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: GPRFHMLPQLALWYRQVSQLPVY*ALVSPK
Trigger: CTTGGGACTCACTAGGGCCCAATAAACTGGTAGCTG...AGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR TCA 90 bp GAAGAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCCCTCGCGCAGGCGGGTaGAGTACTCCACTGCGAATT +
Preference number: 4 (lower is better)
Translates to: EENTTKQLTKGSLSNTCSPRAGG*STPLRI
Trigger: AATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGG...GGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp CTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGGAAGTTCCCCGTTCTATaGCATAAAAGTTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LSMRLNRQCRACLMWTMWKFPVL*HKSCLH
Trigger: ATGGAGACAACTTTTATGTCATAGAACGGGGAACTT...CCACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp CCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGCCTTTTCACCCTGAGTaGTTATGCGTTCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: PKHHCGFGDSCNVCSCQQPFHPE*LCVLHP
Trigger: AGGATGGAGAACGCATAATCACTCAGGGTGAAAAGG...CTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp GATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCCCCACCATCCTTGTTTaGTTTAGTCCTGCTTCTAAT +
Preference number: 4 (lower is better)
Translates to: DLFPTHAPLHEAQPSVQGPTILV*FSPASN
Trigger: ATTAGAAGCAGGACTAAATCAAACAAGGATGGTGGG...GCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp CCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGTATGTGTTCTGTGGCTaGCCAGAAGGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: PKHHCGFGDSCNVCSCQQYVFCG*PEGFGV
Trigger: GACACCAAAACCTTCTGGTCAGCCACAGAACACATA...CTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCAGCTACTCAGGAGGTTaGGGCAGGAGAATCACTTTA +
Preference number: 4 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFSYSGG*GRRITL
Trigger: TAAAGTGATTCTCCTGCCTCAACCTCCTGAGTAGCT...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGAGCGATTCTCCTGCCTaGGCCTCTCAAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: HEPFLQRIQPREESGWHKSDSPA*ASQVAG
Trigger: CCCAGCTACTTGAGAGGCTCAGGCAGGAGAATCGCT...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACGGAAAAGCTCTACCCTaGTTTCTGAGAGTCTACAGC +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYGKALP*FLRVYS
Trigger: GCTGTAGACTCTCAGAAATCAGGGTAGAGCTTTTCC...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp CTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGGAAGCTTCCTGAAGTCTaGATCTCTGTTCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: LSMRLNRQCRACLMWTMWKLPEV*ISVHQF
Trigger: AAACTGATGAACAGAGATGCAGACTTCAGGAAGCTT...CCACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp GGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGAGGACGGACCTATCAGTCTaGTCTGGGGTGCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: GVIFTSGLMNGPSEAKWRTDLSV*SGVLTC
Trigger: GCAGGTCAGCACCCCAGAGCAGACTGATAGGTCCGT...CCTCCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AGAAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCACGGACCTATCAGTCTaGTCTGGGGTGCTGACCTGC +
Preference number: 4 (lower is better)
Translates to: RKYNATGLHMSISSTTISTDLSV*SGVLTC
Trigger: GCAGGTCAGCACCCCAGAGCAGACTGATAGGTCCGT...GGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp TCCCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCACAAATGGTAGGAGTTaGCCAGGAAGGTATTTGGGC +
Preference number: 4 (lower is better)
Translates to: SLSITVGLETAVMCAAVSTNGRS*PGRYLG
Trigger: GCCCAAATACCTTCCTGGGCAACTCCTACCATTTGT...GCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp ATAACCACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTCTGACCAGAAGGTTTTaGTGTCACACTAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: ITTAMAAVAATAGTVLSCLTRRF*CHTKKA
Trigger: AGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAG...ACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTGGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR CCA 90 bp CACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTCCATGAGGCCTATCAGTCTGCTCTaGGGTGCTGACCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: HKTVNKGISFQHMLLSMRPISLL*GADLLG
Trigger: ACCCAGCAGGTCAGCACCCCAGAGCAGACTGATAGG...CCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCATAACCTCTCCTGGCTaGAGAACCATTTCTTGCGAC +
Preference number: 4 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFITSPG*RTISCD
Trigger: GTCGCAAGAAATGGTTCTCCAGCCAGGAGAGGTTAT...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CAA 72 bp AGTTGCTTGGGTCCTAGATTTCATATGCTCCCACAGTaGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAA +
Preference number: 4 (lower is better)
Translates to: SCLGPRFHMLPQ*ALWYRQVSLSK
Trigger: TTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACCCAAGCAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR TCA 90 bp GGGCTACATATGTCCATATCATCCACCACCATTTCCCACTGTAAAACCAAAGGCCCAAAGGGAGCCTTCTaGGGTAGCAACAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: GLHMSISSTTISHCKTKGPKGAF*GSNNGS
Trigger: GCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGG...GCCTTTGGTTTTACAGTGGGAAATGGTGGTGGATGATATGGACATATGTAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp TCCAGCATACTGCCATCAGCTAGTAGAGGCAACTGCAAACAAATGGTAGGAGTTAGATGTTCCTCTTCATaGTGTCCATGCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: SSILPSASRGNCKQMVGVRCSSS*CPCRAP
Trigger: TGGGGCCCTGCATGGACATCATGAAGAGGAACATCT...AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGCTGATGGCAGTATGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp TGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCATCCATATGTGTTCTGTGGCTaGCCAGAAGGTTTTGGTGTC +
Preference number: 4 (lower is better)
Translates to: WHKLGAKRKALRNILYHPYVFCG*PEGFGV
Trigger: GACACCAAAACCTTCTGGTCAGCCACAGAACACATA...TGGATGGTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp CACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTCTGTTAACAGTAAAATGTGCTaGGCCCAAATTTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: HSNGSSGGNGRNSSVMSVNSKMC*AQIFCS
Trigger: AGAGCAGAAAATTTGGGCTCAGCACATTTTACTGTT...AACAGACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp CTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGCTGAGGTTGGGAGTTTaGGACCAGCCTGACCAACAC +
Preference number: 4 (lower is better)
Translates to: LFSVCVLWLTRRFWCHTKLRLGV*DQPDQH
Trigger: GTGTTGGTCAGGCTGGTCTCAAACTCCCAACCTCAG...CTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp GAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGTGGATACCTCAGCCCTaGGTTGAACTTGGCATGCCA +
Preference number: 4 (lower is better)
Translates to: EPFLQRIQPREESGWHKLWIPQP*VELGMP
Trigger: TGGCATGCCAAGTTCAACTCAGGGCTGAGGTATCCA...CAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTAACAGCACCTCTCACTaGATACGATATCACTGTGTG +
Preference number: 4 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCNSTSH*IRYHCV
Trigger: CACACAGTGATATCGTATTCAGTGAGAGGTGCTGTT...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGAGGAGCTCTCCAAAGTACTaGCCCTTATGGCAGCGGGCA +
Preference number: 4 (lower is better)
Translates to: GVIFTSGLMNGPSEAKWRSSPKY*PLWQRA
Trigger: TGCCCGCTGCCATAAGGGGCAGTACTTTGGAGAGCT...CCTCCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCTGTAAAACCAAAGGCTaGAACTGTGAACAAATGTGG +
Preference number: 4 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSCKTKG*NCEQMW
Trigger: CCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACA...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AAATTTTCTGCTCTAACATGGGTCCCACGGACCTATCAGTCTGCTCTGGGGTGCTTGGGACTACATGCATaGATCACCACACCTGACAAA +
Preference number: 4 (lower is better)
Translates to: KFSALTWVPRTYQSALGCLGLHA*ITTPDK
Trigger: TTTGTCAGGTGTGGTGATGCATGCATGTAGTCCCAA...GCACCCCAGAGCAGACTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AGAAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCGCAATCTCGGCTCACTaGAACCTCCACTCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: RKYNATGLHMSISSTTISAISAH*NLHSQV
Trigger: AACCTGGGAGTGGAGGTTGCAGTGAGCCGAGATTGC...GGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGCCATCCCTAGCAGACTaGAGGAGTGACTCTGGCATA +
Preference number: 4 (lower is better)
Translates to: EPFLQRIQPREESGWHKLPSLAD*RSDSGI
Trigger: TATGCCAGAGTCACTCCTGCAGTCTGCTAGGGATGG...CAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp ATAACCACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTTACGATATCACTGTGTaGAGAGAAAACGGGCAATCA +
Preference number: 4 (lower is better)
Translates to: ITTAMAAVAATAGTVLSCYDITV*RENGQS
Trigger: TGATTGCCCGTTTTCTCTGCACACAGTGATATCGTA...ACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTGGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp TTCCACCTCAGCCTCCTAAGTATTTGGGACTACATGCATGCATCACCACACCTGACGGAATCTACCCTTTaGTCAAGGTGGGCTAAATGG +
Preference number: 4 (lower is better)
Translates to: FHLSLLSIWDYMHASPHLTESTL*SRWAKW
Trigger: CCATTTAGCCCACCTTGAGCAAAGGGTAGATTCCGT...CAGGTGTGGTGATGCATGCATGTAGTCCCAAATACTTAGGAGGCTGAGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp AGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATAGGATGAATCACCCTTaGATCTGTATCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: REESGWHKLGAKRKALRNRMNHP*ICIFLF
Trigger: GAAGAGGAAGATACAGATCCAAGGGTGATTCATCCT...ATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp AGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATTCTCCATCATCTCCTTaGTCAATGACATGCTCATCA +
Preference number: 4 (lower is better)
Translates to: REESGWHKLGAKRKALRNSPSSP*SMTCSS
Trigger: TGATGAGCATGTCATTGACCAAGGAGATGATGGAGA...ATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp GTTGCCCAGATCCACGCTGGAGCCAAACATCTTCACCAGCTGTTCCTCATAGTGAAGTGGTCTAATGAATaGGCCTTCAGAAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: VAQIHAGAKHLHQLFLIVKWSNE*AFRSKV
Trigger: CACTTTGCTTCTGAAGGCCCATTCATTAGACCACTT...CACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR CCA 90 bp ATAACCACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTAACCTCAGAAAAATATaGGGTCACCACATGGGCTTT +
Preference number: 4 (lower is better)
Translates to: ITTAMAAVAATAGTVLSCNLRKI*GHHMGF
Trigger: AAAGCCCATGTGGTGACCCCATATTTTTCTGAGGTT...ACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTGGTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACTACAAGAAACTGGTGTaGTTCTTGTCTGCTAAGGGC +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYYKKLV*FLSAKG
Trigger: GCCCTTAGCAGACAAGAACCACACCAGTTTCTTGTA...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp CTACCAGTTTATTGGGCCCTAGTGAGTCCCAAGATTTCCATCTACCAGTTGCTTATATGCTCCCACAGTTaGCCCTTTGGTACAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPVYWALVSPKISIYQLLICSHS*PFGTGR
Trigger: CCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATAT...AAGCAACTGGTAGATGGAAATCTTGGGACTCACTAGGGCCCAATAAACTGGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR TCA 90 bp GATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCCCAACAGAGCGGGTTTaGTTATCTTTTGTTACTAAA +
Preference number: 4 (lower is better)
Translates to: DLFPTHAPLHEAQPSVQGPTERV*LSFVTK
Trigger: TTTAGTAACAAAAGATAATCAAACCCGCTCTGTTGG...GCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp CCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGCTGTTCCTCATAGTGTaGGATGTTCCTCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: PKHHCGFGDSCNVCSCQQLFLIV*DVPLHD
Trigger: ATCATGAAGAGGAACATCTCACACTATGAGGAACAG...CTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp AAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCAGTGGAGGTGTGGGTTaGACCTCTGCCCATCCTTTA +
Preference number: 4 (lower is better)
Translates to: KTVNKGISFQHMLLSMRLSGGVG*TSAHPL
Trigger: TAAAGGATGGGCAGAGGTTCAACCCACACCTCCACT...GAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGAGTGGAGGTGTGGGTTaGACCTCTGCCCATCCTTTA +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWSGGVG*TSAHPL
Trigger: TAAAGGATGGGCAGAGGTTCAACCCACACCTCCACT...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR TCA 90 bp CTTAAATTGTTGGAGAGACATGCCGTTTTGAACCAAAGATATAAAAACTGGGTTCTGGTCTTGAACCCCTaGCCTCGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: LKLLERHAVLNQRYKNWVLVLNP*PRDPPA
Trigger: GGCGGGCGGATCACGAGGTCAGGGGTTCAAGACCAG...AACCCAGTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTCCAACAATTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp AGAAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCACCTCAGCCCTGAGTTaGACTTGGCATGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: RKYNATGLHMSISSTTISTSALS*TWHATF
Trigger: AAAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGT...GGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp TCCCACTGTAAAACCAAAGGCTGCAACTGTGAACAAATGTGGACTTCCTCAAAGGGTGAAGTACTCCACTaGGAATTCGACGAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SHCKTKGCNCEQMWTSSKGEVLH*EFDEVR
Trigger: CCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACC...CTTTGAGGAAGTCCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACAGTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AAATTTTCTGCTCTAACATGGGTCCCACGGACCTATCAGTCTGCTCTGGGGTGCCCTTGGTCAATGACATaGTCATCAGCTTTGACTATC +
Preference number: 4 (lower is better)
Translates to: KFSALTWVPRTYQSALGCPWSMT*SSALTI
Trigger: GATAGTCAAAGCTGATGAGCATGTCATTGACCAAGG...GCACCCCAGAGCAGACTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CTTAAATTGTTGGAGAGACATGCCGTTTTGAACCAAAGATATAAAAACTGGGTTCTGGGAGGCGGAGGTTaGGGTGAGCCAAGACCGCAC +
Preference number: 4 (lower is better)
Translates to: LKLLERHAVLNQRYKNWVLGGGG*GEPRPH
Trigger: GTGCGGTCTTGGCTCACCGCAACCTCCGCCTCCCAG...AACCCAGTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTCCAACAATTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp TTCCACCTCAGCCTCCTAAGTATTTGGGACTACATGCATGCATCACCACACCTGTTGGGACTACATGCATaGATCACCACACCTGACAAA +
Preference number: 4 (lower is better)
Translates to: FHLSLLSIWDYMHASPHLLGLHA*ITTPDK
Trigger: TTTGTCAGGTGTGGTGATGCATGCATGTAGTCCCAA...CAGGTGTGGTGATGCATGCATGTAGTCCCAAATACTTAGGAGGCTGAGGTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGAGGGTCTCCCTCTGTTaGCCAGGATGGTTTGGAACT +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWRVSLC*PGWFGT
Trigger: AGTTCCAAACCATCCTGGGCAACAGAGGGAGACCCT...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTACCTTTGATTCCCCATaGTACTGCCCGAGGTTGCCC +
Preference number: 4 (lower is better)
Translates to: ENTTKQLTKGSLSNTCSSTFDSP*YCPRLP
Trigger: GGGCAACCTCGGGCAGTAGCATGGGGAATCAAAGGT...AGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS-3UTR CCA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCCTATCCTTTCAAACATaGCATCGAGAACTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSLSFQT*HRELEK
Trigger: TTTCTCAAGTTCTCGATGCCATGTTTGAAAGGATAG...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTTCTCCATCATCTCCTTaGTCAATGACATGCTCATCA +
Preference number: 4 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCSPSSP*SMTCSS
Trigger: TGATGAGCATGTCATTGACCAAGGAGATGATGGAGA...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGAAGTACTGCCCCTTATaGCAGCGGGCAATCTCGACC +
Preference number: 4 (lower is better)
Translates to: VGVIFTSGLMNGPSEAKWKYCPL*QRAIST
Trigger: GGTCGAGATTGCCCGCTGCCATAAGGGGCAGTACTT...CCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCCAGCAATGGCAGCAGTaGCGGCAACGGCAGGAACAG +
Preference number: 4 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTQQWQQ*RQRQEQ
Trigger: CTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTG...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGAGCAAAGTGGAGGTGTaGGTTGAACCTCTGCCCATC +
Preference number: 4 (lower is better)
Translates to: HEPFLQRIQPREESGWHKSKVEV*VEPLPI
Trigger: GATGGGCAGAGGTTCAACCCACACCTCCACTTTGCT...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp TCCAGCATACTGCCATCAGCTAGTAGAGGCAACTGCAAACAAATGGTAGGAGTTAGAATCACTTTAATCTaGGAGGCGGAGGTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: SSILPSASRGNCKQMVGVRITLI*EAEVAV
Trigger: CACCGCAACCTCCGCCTCCCAGATTAAAGTGATTCT...AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGCTGATGGCAGTATGCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AGAAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCAGACTGGAGTGCAGTaGCATGATCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: RKYNATGLHMSISSTTISQTGVQ*HDHSSL
Trigger: CAGTGAGCTGTGATCATGCCACTGCACTCCAGTCTG...GGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGAGGCAGACTGGAGTGCAGTaGCATGATCACAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GVIFTSGLMNGPSEAKWRQTGVQ*HDHSSL
Trigger: CAGTGAGCTGTGATCATGCCACTGCACTCCAGTCTG...CCTCCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp TCCAGCATACTGCCATCAGCTAGTAGAGGCAACTGCAAACAAATGGTAGGAGTTGTGGGTCACCGTGCCTaGCCAATGCCAATTTTTGAA +
Preference number: 4 (lower is better)
Translates to: SSILPSASRGNCKQMVGVVGHRA*PMPIFE
Trigger: TTCAAAAATTGGCATTGGCCAGGCACGGTGACCCAC...AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGCTGATGGCAGTATGCTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACTCATCAGTTTTAGGATaGATCACCCTTGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYSSVLG*ITLGSV
Trigger: TACAGATCCAAGGGTGATTCATCCTAAAACTGATGA...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGCCAAAGGGAGCCTTCTaGGGTAGCAACAATGGTAGC +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKPKGAF*GSNNGS
Trigger: GCTACCATTGTTGCTACCTCAGAAGGCTCCCTTTGG...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp GAAGAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCAGATGTTCCTCTTCATaGTGTCCATGCAGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EENTTKQLTKGSLSNTCSRCSSS*CPCRAP
Trigger: TGGGGCCCTGCATGGACATCATGAAGAGGAACATCT...GGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp CCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGCTGTTCCTCATAGTGTaGGATGTTCCTCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: PFLQRIQPREESGWHKLGLFLIV*DVPLHD
Trigger: ATCATGAAGAGGAACATCTCACACTATGAGGAACAG...CCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGAGTGGAGGTGTGGGTTaGACCTCTGCCCATCCTTTA +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKSGGVG*TSAHPL
Trigger: TAAAGGATGGGCAGAGGTTCAACCCACACCTCCACT...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR TCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCCATTGAGCCTGGCCTaGGAATTTTCTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYPLSLA*EFSLIS
Trigger: TGAAATTAAAGAAAATTCTCAGGCCAGGCTCAATGG...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp AAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCAGGATCCTGTATGCAGTaGGGGTCTGAACTGATGATC +
Preference number: 4 (lower is better)
Translates to: KVQCHWATYVHIIHHHFPGSCMQ*GSELMI
Trigger: GATCATCAGTTCAGACCCTCACTGCATACAGGATCC...TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp TCCAGCATACTGCCATCAGCTAGTAGAGGCAACTGCAAACAAATGGTAGGAGTTTTGGCATGCCACCTTTaGTTCCCCATGCTGCAAAAA +
Preference number: 4 (lower is better)
Translates to: SSILPSASRGNCKQMVGVLACHL*FPMLQK
Trigger: TTTTTGCAGCATGGGGAATCAAAGGTGGCATGCCAA...AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGCTGATGGCAGTATGCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp GAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTACCTCAGCCCTGAGTTaGACTTGGCATGCCACCTTT +
Preference number: 4 (lower is better)
Translates to: ENTTKQLTKGSLSNTCSSTSALS*TWHATF
Trigger: AAAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGT...AGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTCCCACCATCCTTGTTTaGTTTAGTCTGAGTGATTAT +
Preference number: 4 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCPTILV*FSLSDY
Trigger: ATAATCACTCAGACTAAATCAAACAAGGATGGTGGG...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296446.12
CDS-3UTR GCA 90 bp CTTAAATTGTTGGAGAGACATGCCGTTTTGAACCAAAGATATAAAAACTGGGTTCCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LKLLERHAVLNQRYKNWVPTARG*PDPRWS
Trigger: GCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGG...AACCCAGTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTCCAACAATTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGTGTGGGTTGAACCTCTaGCCATCCTTTAGTGCTGAC +
Preference number: 4 (lower is better)
Translates to: LFSVCVLWLTRRFWCHTKCGLNL*PSFSAD
Trigger: GTCAGCACTAAAGGATGGGCAGAGGTTCAACCCACA...CTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR GCA 90 bp TTCCACCTCAGCCTCCTAAGTATTTGGGACTACATGCATGCATCACCACACCTGGCTAGTAGAGGCAACTaGAAACAAATGGTAGGAGTT +
Preference number: 4 (lower is better)
Translates to: FHLSLLSIWDYMHASPHLASRGN*KQMVGV
Trigger: AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGC...CAGGTGTGGTGATGCATGCATGTAGTCCCAAATACTTAGGAGGCTGAGGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CCTGAGCAGGATGACTTAAACCTGATCAATTCTACTCCAAAACAGCAACTATCACGTCAGTGCAGGGCTTaGCTGATGTGGACAATGTGG +
Preference number: 4 (lower is better)
Translates to: PEQDDLNLINSTPKQQLSRQCRA*LMWTMW
Trigger: CCACATTGTCCACATCAGGCAAGCCCTGCACTGACG...TGATAGTTGCTGTTTTGGAGTAGAATTGATCAGGTTTAAGTCATCCTGCTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp TGTCTCTGTCCAAATGTGGGCAAGATCAAACTGCAACAAGGCGCTTCCTTTGGTGTCCTAGATTTCATATaGTCCCACAGTTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: CLCPNVGKIKLQQGASFGVLDFI*SHSWPF
Trigger: AAAGGGCCAACTGTGGGAGCATATGAAATCTAGGAC...ACCAAAGGAAGCGCCTTGTTGCAGTTTGATCTTGCCCACATTTGGACAGAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR GCA 90 bp GTACAGGCAGGTGTCTCTGTCCAAATGTGGGCAAGATCAAACTGCAACAAGGCGTTTCCATCTACCAGTTaGTTGGGTCCTAGATTTCAT +
Preference number: 4 (lower is better)
Translates to: VQAGVSVQMWARSNCNKAFPSTS*LGPRFH
Trigger: ATGAAATCTAGGACCCAAGCAACTGGTAGATGGAAA...CGCCTTGTTGCAGTTTGATCTTGCCCACATTTGGACAGAGACACCTGCCTGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CCA 90 bp GTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VGVIFTSGLMNGPSEAKWCPDPR*SQTSSP
Trigger: TGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCA...CCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR CCA 90 bp GTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGCTGACCAGAAGGTTTTaGTGTCACACTAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: VCVLWLTRRFWCHTKKALLTRRF*CHTKKA
Trigger: AGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAG...CAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR CCA 90 bp GGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGAGGGCCCAGGAAGGTATTTaGGCTGGACAAAGTGATAGC +
Preference number: 4 (lower is better)
Translates to: GVIFTSGLMNGPSEAKWRAQEGI*AGQSDS
Trigger: GCTATCACTTTGTCCAGCCCAAATACCTTCCTGGGC...CCTCCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACGAATTACCAAGGTTGTaGTGGGTTATTTACTCTGGA +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYELPRL*WVIYSG
Trigger: TCCAGAGTAAATAACCCACCACAACCTTGGTAATTC...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGAGAGAAGAGAGTGGGTaGCATAAGCTGGGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKREESG*HKLGAK
Trigger: TTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCT...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp TTATTGGGCCCTAGTGAGTCCCAAGATTTCCATCTACCAGTTGCTTGGGTCCTAGTCTCTGTCCAAATGTaGGCAAGATCAAACTGCAAC +
Preference number: 4 (lower is better)
Translates to: LLGPSESQDFHLPVAWVLVSVQM*ARSNCN
Trigger: GTTGCAGTTTGATCTTGCCCACATTTGGACAGAGAC...TAGGACCCAAGCAACTGGTAGATGGAAATCTTGGGACTCACTAGGGCCCAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR TCA 90 bp CCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGAAGTTCCCCGTTCTATaGCATAAAAGTTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: PFLQRIQPREESGWHKLGKFPVL*HKSCLH
Trigger: ATGGAGACAACTTTTATGTCATAGAACGGGGAACTT...CCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp AAATTTTCTGCTCTAACATGGGTCCCACGGACCTATCAGTCTGCTCTGGGGTGCCCAACAGAGCGGGTTTaGTTATCTTTTGTTACTAAA +
Preference number: 4 (lower is better)
Translates to: KFSALTWVPRTYQSALGCPTERV*LSFVTK
Trigger: TTTAGTAACAAAAGATAATCAAACCCGCTCTGTTGG...GCACCCCAGAGCAGACTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp CTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGCCTTTTCACCCTGAGTaGTTATGCGTTCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: LFSVCVLWLTRRFWCHTKPFHPE*LCVLHP
Trigger: AGGATGGAGAACGCATAATCACTCAGGGTGAAAAGG...CTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000438535.1
CDS-3UTR TCA 90 bp CAGCTACCAGTTTATTGGGCCCTAGTGAGTCCCAAGATTTCCATCTACCAGTTGCTGTTCCTCATAGTGTaGGATGTTCCTCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: QLPVYWALVSPKISIYQLLFLIV*DVPLHD
Trigger: ATCATGAAGAGGAACATCTCACACTATGAGGAACAG...CAACTGGTAGATGGAAATCTTGGGACTCACTAGGGCCCAATAAACTGGTAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR TCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGATAGGCATGAGCCATTaGGCCTGGCCTGAGAATTTT +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWIGMSH*AWPENF
Trigger: AAAATTCTCAGGCCAGGCTCAATGGCTCATGCCTAT...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp AAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCAAGCTACTCAGGAGGTTaGGGCAGGAGAATCACTTTA +
Preference number: 4 (lower is better)
Translates to: KVQCHWATYVHIIHHHFPSYSGG*GRRITL
Trigger: TAAAGTGATTCTCCTGCCTCAACCTCCTGAGTAGCT...TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTTATACCTTATTAGGATaGTCACTGGAATTCTACCAG +
Preference number: 4 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCYTLLG*SLEFYQ
Trigger: CTGGTAGAATTCCAGTGATCATCCTAATAAGGTATA...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp CACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTCCATGAGGCCTCTGTGTCACTCCTaGATCCCAATGTATCCGTTA +
Preference number: 4 (lower is better)
Translates to: HKTVNKGISFQHMLLSMRPLCHS*IPMYPL
Trigger: TAACGGATACATTGGGATTCAGGAGTGACACAGAGG...CCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGCTAGTTCTCCAAAACTaGCACGGTTGTCATATTGAC +
Preference number: 4 (lower is better)
Translates to: VCVLWLTRRFWCHTKKALLVLQN*HGCHID
Trigger: GTCAATATGACAACCGTGGCAGTTTTGGAGAACTAG...CAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CTTAAATTGTTGGAGAGACATGCCGTTTTGAACCAAAGATATAAAAACTGGGTTGTGTGGCACACCTACTaGCCGAGGTTGCCCAGATCC +
Preference number: 4 (lower is better)
Translates to: LKLLERHAVLNQRYKNWVVWHTY*PRLPRS
Trigger: GGATCTGGGCAACCTCGGGCAGTAGGTGTGCCACAC...AACCCAGTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTCCAACAATTTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp GAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGCAGCAGAAAGTACAATaGCACTGGGCTACATATGTC +
Preference number: 4 (lower is better)
Translates to: EPFLQRIQPREESGWHKLQQKVQ*HWATYV
Trigger: GACATATGTAGCCCAGTGGCATTGTACTTTCTGCTG...CAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp CACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCTTTCCAGCATACTaGCATCAGCTAGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: HKTVNKGISFQHMLLSMRLFPAY*HQLVEA
Trigger: TGCCTCTACTAGCTGATGGCAGTATGCTGGAAAGAG...CCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp AGAAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCCTGTTTTGGAAAGCTaGAATGTAGGCTACAGAGGG +
Preference number: 4 (lower is better)
Translates to: RKYNATGLHMSISSTTISPVLES*NVGYRG
Trigger: CCCTCTGTAGCCTACATTGCAGCTTTCCAAAACAGG...GGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGTGGAGAACCATTTCTTaGGACTTTGCTGCTGAATTC +
Preference number: 4 (lower is better)
Translates to: VCVLWLTRRFWCHTKKALWRTIS*DFAAEF
Trigger: GAATTCAGCAGCAAAGTCGCAAGAAATGGTTCTCCA...CAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp GAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGAAATCTGCTAGGAACTaGAACTTCCAAGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: EPFLQRIQPREESGWHKLKSARN*NFQVLV
Trigger: GACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATTT...CAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCAAGTACTGCCCCTTATaGCAGCGGGCAATCTCGACC +
Preference number: 4 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTKYCPL*QRAIST
Trigger: GGTCGAGATTGCCCGCTGCCATAAGGGGCAGTACTT...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGAGCAAAGTGGAGGTGTaGGTTGAACCTCTGCCCATC +
Preference number: 4 (lower is better)
Translates to: ATFPPLRTIRECLQLYNRSKVEV*VEPLPI
Trigger: GATGGGCAGAGGTTCAACCCACACCTCCACTTTGCT...CCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GAGGCATCTGCTCAGTGTTCAAACAAAATCCTTACAAGTTCTGGGGCTGGACCTAAGTGGTCTAATGAATaGGCCTTCAGAAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: EASAQCSNKILTSSGAGPKWSNE*AFRSKV
Trigger: CACTTTGCTTCTGAAGGCCCATTCATTAGACCACTT...AGGTCCAGCCCCAGAACTTGTAAGGATTTTGTTTGAACACTGAGCAGATGCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACAACTGTGAACAAATGTaGACTTCCTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: SGWHKLGAKRKALRNILYNCEQM*TSSKDK
Trigger: TTTGTCCTTTGAGGAAGTCCACATTTGTTCACAGTT...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp AGATATAAAAACTGGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTCCTATCAGTCTGCTCTaGGGTGCTGACCTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: RYKNWVGVIFTSGLMNGPPISLL*GADLLG
Trigger: ACCCAGCAGGTCAGCACCCCAGAGCAGACTGATAGG...AGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTTTTCTGCTCTAACATaGGTCCCACGGACCTATCAG +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWFSALT*VPRTYQ
Trigger: CTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAA...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGGTGGGTCACCGTGCCTaGCCAATGCCAATTTTTGAA +
Preference number: 4 (lower is better)
Translates to: VGVIFTSGLMNGPSEAKWVGHRA*PMPIFE
Trigger: TTCAAAAATTGGCATTGGCCAGGCACGGTGACCCAC...CCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTCAAGGTGGGCTAAATaGTTTTACGCAAACCCCTCC +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWSRWAK*FYANPS
Trigger: GGAGGGGTTTGCGTAAAACCATTTAGCCCACCTTGA...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp GAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGCTGTTCCTCATAGTGTaGGATGTTCCTCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: EPFLQRIQPREESGWHKLLFLIV*DVPLHD
Trigger: ATCATGAAGAGGAACATCTCACACTATGAGGAACAG...CAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGATAGGCATGAGCCATTaGGCCTGGCCTGAGAATTTT +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKIGMSH*AWPENF
Trigger: AAAATTCTCAGGCCAGGCTCAATGGCTCATGCCTAT...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp TGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTTATGCAGTGAGGGTCTaGACTGATGATCCATATGTC +
Preference number: 4 (lower is better)
Translates to: CLFSVCVLWLTRRFWCHTYAVRV*TDDPYV
Trigger: GACATATGGATCATCAGTTCAGACCCTCACTGCATA...AGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp TCCCACTGTAAAACCAAAGGCTGCAACTGTGAACAAATGTGGACTTCCTCAAAGTTGTACACTGTGACATaGCATGAAATGCTGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SHCKTKGCNCEQMWTSSKLYTVT*HEMLCA
Trigger: GGCACACAGCATTTCATGTCATGTCACAGTGTACAA...CTTTGAGGAAGTCCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACAGTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGCTAGTTCTCCAAAACTaGCACGGTTGTCATATTGAC +
Preference number: 4 (lower is better)
Translates to: EPFLQRIQPREESGWHKLLVLQN*HGCHID
Trigger: GTCAATATGACAACCGTGGCAGTTTTGGAGAACTAG...CAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp CCTGAGCAGGATGACTTAAACCTGATCAATTCTACTCCAAAACAGCAACTATCATTCAAGCGATTCTCCTaGCTGAGCCTCTCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: PEQDDLNLINSTPKQQLSFKRFS*LSLSSS
Trigger: GCTACTTGAGAGGCTCAGGCAGGAGAATCGCTTGAA...TGATAGTTGCTGTTTTGGAGTAGAATTGATCAGGTTTAAGTCATCCTGCTCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp GCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGAGAATCACTTTAATCTaGGAGGCGGAGGTTGCGGTG +
Preference number: 4 (lower is better)
Translates to: ATFPPLRTIRECLQLYNRRITLI*EAEVAV
Trigger: CACCGCAACCTCCGCCTCCCAGATTAAAGTGATTCT...CCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCCGGGGTGGAATACAATaGTGCAATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTRGGIQ*CNLGSL
Trigger: CAGTGAGCCGAGATTGCACCATTGTATTCCACCCCG...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp TGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTACCCTTTGCTCAAGGTaGGCTAAATGGTTTTACGCA +
Preference number: 4 (lower is better)
Translates to: CLFSVCVLWLTRRFWCHTTLCSR*AKWFYA
Trigger: TGCGTAAAACCATTTAGCCCACCTTGAGCAAAGGGT...AGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp CTACCAGTTTATTGGGCCCTAGTGAGTCCCAAGATTTCCATCTACCAGTTGCTTCATCTACCAGTTGCTTaGGTCCTAGATTTCATATGC +
Preference number: 4 (lower is better)
Translates to: LPVYWALVSPKISIYQLLHLPVA*VLDFIC
Trigger: GCATATGAAATCTAGGACCCAAGCAACTGGTAGATG...AAGCAACTGGTAGATGGAAATCTTGGGACTCACTAGGGCCCAATAAACTGGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR TCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGTCTTTGCAAGCTTCCTaGAGTCTGCATCTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKSLQAS*SLHLCS
Trigger: TGAACAGAGATGCAGACTTCAGGAAGCTTGCAAAGA...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGCATGCTCATCAGCTTTaGCTATCCTTTCAAACATGG +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWHAHQL*LSFQTW
Trigger: CCATGTTTGAAAGGATAGTCAAAGCTGATGAGCATG...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp AAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCATTGCGACTTTGCTGCTaGATTCACTCATTAAACTGC +
Preference number: 4 (lower is better)
Translates to: KVQCHWATYVHIIHHHFPLRLCC*IHSLNC
Trigger: GCAGTTTAATGAGTGAATTCAGCAGCAAAGTCGCAA...TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp GGGCTACATATGTCCATATCATCCACCACCATTTCCCACTGTAAAACCAAAGGCCCACAGAGCAAGAATTaGTCACGTTTCAATCACTTA +
Preference number: 4 (lower is better)
Translates to: GLHMSISSTTISHCKTKGPQSKN*SRFNHL
Trigger: TAAGTGATTGAAACGTGATCAATTCTTGCTCTGTGG...GCCTTTGGTTTTACAGTGGGAAATGGTGGTGGATGATATGGACATATGTAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp TCCCACTGTAAAACCAAAGGCTGCAACTGTGAACAAATGTGGACTTCCTCAAAGCTAGTTCTCCAAAACTaGCACGGTTGTCATATTGAC +
Preference number: 4 (lower is better)
Translates to: SHCKTKGCNCEQMWTSSKLVLQN*HGCHID
Trigger: GTCAATATGACAACCGTGGCAGTTTTGGAGAACTAG...CTTTGAGGAAGTCCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACAGTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTATACAACAGGTTTCTaGAGACCCTGTGGTAACTTC +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWYTTGF*RPCGNF
Trigger: GAAGTTACCACAGGGTCTGCAGAAACCTGTTGTATA...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp GAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGTGTAAAACCAAAGGCTaGAACTGTGAACAAATGTGG +
Preference number: 4 (lower is better)
Translates to: EPFLQRIQPREESGWHKLCKTKG*NCEQMW
Trigger: CCACATTTGTTCACAGTTGCAGCCTTTGGTTTTACA...CAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGACAGCTGTAATGTGTaGAGCTGTCAGCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKDSCNV*SCQQKV
Trigger: TACTTTCTGCTGACAGCTGCACACATTACAGCTGTC...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CTGAAGGCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACCTCTTTCCAGCATACTaGCATCAGCTAGTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: LKATFPPLRTIRECLQLYLFPAY*HQLVEA
Trigger: TGCCTCTACTAGCTGATGGCAGTATGCTGGAAAGAG...GTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGACCGTGCCTGGCCAATaGCAATTTTTGAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWTVPGQ*QFLKTD
Trigger: ATCTGTTTTCAAAAATTGGCATTGGCCAGGCACGGT...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp TGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCATCCAATTCACTCATTAAACTaGTCAAAGGAAAAGCTCTAC +
Preference number: 4 (lower is better)
Translates to: WHKLGAKRKALRNILYHPIHSLN*SKEKLY
Trigger: GTAGAGCTTTTCCTTTGAGCAGTTTAATGAGTGAAT...TGGATGGTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp GTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGAAATCTGCTAGGAACTaGAACTTCCAAGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: VGVIFTSGLMNGPSEAKWKSARN*NFQVLV
Trigger: GACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATTT...CCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp ATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACAGGATGAATCACCCTTaGATCTGTATCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: MSVFCMCSVADQKVLVSHRMNHP*ICIFLF
Trigger: GAAGAGGAAGATACAGATCCAAGGGTGATTCATCCT...GTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCATCTCCATCATCTCCTTaGTCAATGACATGCTCATCA +
Preference number: 4 (lower is better)
Translates to: KVQCHWATYVHIIHHHFPSPSSP*SMTCSS
Trigger: TGATGAGCATGTCATTGACCAAGGAGATGATGGAGA...TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp CTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGTGGTCTAATGAATaGGCCTTCAGAAGCAAAGTG +
Preference number: 4 (lower is better)
Translates to: LFSVCVLWLTRRFWCHTKKWSNE*AFRSKV
Trigger: CACTTTGCTTCTGAAGGCCCATTCATTAGACCACTT...CTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR CCA 90 bp TCCAGCATACTGCCATCAGCTAGTAGAGGCAACTGCAAACAAATGGTAGGAGTTCCAGAAAACGTTTCCTaGCTCTCTACTAACAGTAAA +
Preference number: 4 (lower is better)
Translates to: SSILPSASRGNCKQMVGVPENVS*LSTNSK
Trigger: TTTACTGTTAGTAGAGAGCCAGGAAACGTTTTCTGG...AACTCCTACCATTTGTTTGCAGTTGCCTCTACTAGCTGATGGCAGTATGCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGGCTACACAACAACTCTaGAGTAGAAGGAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWATQQL*SRRKEL
Trigger: GAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGC...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGACTCTGGAAATATCTTaGTCACACTGTCCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKTLEIS*SHCPWQ
Trigger: TTGCCACGGACAGTGTGACCAAGATATTTCCAGAGT...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp GGGCTACATATGTCCATATCATCCACCACCATTTCCCACTGTAAAACCAAAGGCACCTTTACAAGAAACTaGTGTGGTTCTTGTCTGCTA +
Preference number: 4 (lower is better)
Translates to: GLHMSISSTTISHCKTKGTFTRN*CGSCLL
Trigger: TAGCAGACAAGAACCACACCAGTTTCTTGTAAAGGT...GCCTTTGGTTTTACAGTGGGAAATGGTGGTGGATGATATGGACATATGTAGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGTCATCAGTTTTAGGATaGATCACCCTTGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: HEPFLQRIQPREESGWHKSSVLG*ITLGSV
Trigger: TACAGATCCAAGGGTGATTCATCCTAAAACTGATGA...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGCTGTTCCTCATAGTGTaGGATGTTCCTCTTCATGAT +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKLFLIV*DVPLHD
Trigger: ATCATGAAGAGGAACATCTCACACTATGAGGAACAG...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR TCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCAGCAGACTGCAGGAGTaGCTCTGGCATAGAATTCAT +
Preference number: 4 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTSRLQE*LWHRIH
Trigger: ATGAATTCTATGCCAGAGTCACTCCTGCAGTCTGCT...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp CTGAAGGCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACCAGCAGAAAGTACAATaGCACTGGGCTACATATGTC +
Preference number: 4 (lower is better)
Translates to: LKATFPPLRTIRECLQLYQQKVQ*HWATYV
Trigger: GACATATGTAGCCCAGTGGCATTGTACTTTCTGCTG...GTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGCCTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCACAAATGGTAGGAGTTaGCCAGGAAGGTATTTGGGC +
Preference number: 4 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTTNGRS*PGRYLG
Trigger: GCCCAAATACCTTCCTGGGCAACTCCTACCATTTGT...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCTTTGATTCCCCATGCTaGAAAAAGAATTGGAACGCT +
Preference number: 4 (lower is better)
Translates to: KTVNKGISFQHMLLSMRLFDSPC*KKNWNA
Trigger: AGCGTTCCAATTCTTTTTGCAGCATGGGGAATCAAA...GAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp TGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTACCTTTGATTCCCCATaGTGCAAAAAGAATTGGAAC +
Preference number: 4 (lower is better)
Translates to: CLFSVCVLWLTRRFWCHTTFDSP*CKKNWN
Trigger: GTTCCAATTCTTTTTGCAGCATGGGGAATCAAAGGT...AGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp GAAAAGAGTCCTTCTGCTTTCGCTTCCTGGAGCTTAAGAAGAAAAGAGGAATTAAAATCTGCTAGGAACTaGAACTTCCAAGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: EKSPSAFASWSLRRKEELKSARN*NFQVLV
Trigger: GACGAGGACTTGGAAGTTCCAGTTCCTAGCAGATTT...TAATTCCTCTTTTCTTCTTAAGCTCCAGGAAGCGAAAGCAGAAGGACTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp CTGAAGGCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACCTGACCAGAAGGTTTTaGTGTCACACTAAGAAGGCT +
Preference number: 4 (lower is better)
Translates to: LKATFPPLRTIRECLQLYLTRRF*CHTKKA
Trigger: AGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAG...GTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGCCTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCAAAAGTACAATGCCACTaGGCTACATATGTCCATATC +
Preference number: 4 (lower is better)
Translates to: KVQCHWATYVHIIHHHFPKVQCH*ATYVHI
Trigger: GATATGGACATATGTAGCCCAGTGGCATTGTACTTT...TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTTCTGTCATGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGCCAGAAAACGTTTCCTaGCTCTCTACTAACAGTAAA +
Preference number: 4 (lower is better)
Translates to: VLSCLFSVCVLWLTRRFWPENVS*LSTNSK
Trigger: TTTACTGTTAGTAGAGAGCCAGGAAACGTTTTCTGG...CCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACATGACAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTACACAACAACTCTaGAGTAGAAGGAAAGAACTC +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKATQQL*SRRKEL
Trigger: GAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGC...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp GTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGTCTGCTTTCGCTTCCTaGAGCTTAAGAAGAAAAGAG +
Preference number: 4 (lower is better)
Translates to: VGVIFTSGLMNGPSEAKWSAFAS*SLRRKE
Trigger: CTCTTTTCTTCTTAAGCTCCAGGAAGCGAAAGCAGA...CCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGTCATCAGTTTTAGGATaGATCACCCTTGGATCTGTA +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKSSVLG*ITLGSV
Trigger: TACAGATCCAAGGGTGATTCATCCTAAAACTGATGA...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp CCTGAGCAGGATGACTTAAACCTGATCAATTCTACTCCAAAACAGCAACTATCACATGCTCATCAGCTTTaGCTATCCTTTCAAACATGG +
Preference number: 4 (lower is better)
Translates to: PEQDDLNLINSTPKQQLSHAHQL*LSFQTW
Trigger: CCATGTTTGAAAGGATAGTCAAAGCTGATGAGCATG...TGATAGTTGCTGTTTTGGAGTAGAATTGATCAGGTTTAAGTCATCCTGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp GAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTAACAGTAAAATGTGCTaGGCCCAAATTTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ENTTKQLTKGSLSNTCSSNSKMC*AQIFCS
Trigger: AGAGCAGAAAATTTGGGCTCAGCACATTTTACTGTT...AGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp AAGCTACACAACAACTCTGGAGTAGAAGGAAAGAACTCTCTTTATAGTACAACCGACAGCTGTAATGTGTaGAGCTGTCAGCAGAAAGTA +
Preference number: 4 (lower is better)
Translates to: KLHNNSGVEGKNSLYSTTDSCNV*SCQQKV
Trigger: TACTTTCTGCTGACAGCTGCACACATTACAGCTGTC...GGTTGTACTATAAAGAGAGTTCTTTCCTTCTACTCCAGAGTTGTTGTGTAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CTGAAGGCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACACCGTGCCTGGCCAATaGCAATTTTTGAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: LKATFPPLRTIRECLQLYTVPGQ*QFLKTD
Trigger: ATCTGTTTTCAAAAATTGGCATTGGCCAGGCACGGT...GTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGCCTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CCATCATTATCTACAATAGAAATGACTCAAGCCCTAGCATGTAATCTCTTAGGGCAGGGAGGAGGCATCTaGTCAGTGTTCAAACAAAAT +
Preference number: 4 (lower is better)
Translates to: PSLSTIEMTQALACNLLGQGGGI*SVFKQN
Trigger: ATTTTGTTTGAACACTGAGCAGATGCCTCCTCCCTG...CCCTAAGAGATTACATGCTAGGGCTTGAGTCATTTCTATTGTAGATAATGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CCA 90 bp GCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGAGGATGAATCACCCTTaGATCTGTATCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ATFPPLRTIRECLQLYNRRMNHP*ICIFLF
Trigger: GAAGAGGAAGATACAGATCCAAGGGTGATTCATCCT...CCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AGAAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCTATCCTTTCAAACATaGCATCGAGAACTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: RKYNATGLHMSISSTTISLSFQT*HRELEK
Trigger: TTTCTCAAGTTCTCGATGCCATGTTTGAAAGGATAG...GGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp CACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTATCCTTTCAAACATaGCATCGAGAACTTGAGAAA +
Preference number: 4 (lower is better)
Translates to: HKTVNKGISFQHMLLSMRLSFQT*HRELEK
Trigger: TTTCTCAAGTTCTCGATGCCATGTTTGAAAGGATAG...CCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CCA 90 bp CTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAACTGTGAACAAATGTaGACTTCCTCAAAGGACAAA +
Preference number: 4 (lower is better)
Translates to: LFSVCVLWLTRRFWCHTKNCEQM*TSSKDK
Trigger: TTTGTCCTTTGAGGAAGTCCACATTTGTTCACAGTT...CTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AGATATAAAAACTGGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTTTTCTGCTCTAACATaGGTCCCACGGACCTATCAG +
Preference number: 4 (lower is better)
Translates to: RYKNWVGVIFTSGLMNGPFSALT*VPRTYQ
Trigger: CTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAA...AGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp CCTGAGCAGGATGACTTAAACCTGATCAATTCTACTCCAAAACAGCAACTATCAAAACATAACCTCTCCTaGCTGGAGAACCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: PEQDDLNLINSTPKQQLSKHNLS*LENHFL
Trigger: CAAGAAATGGTTCTCCAGCCAGGAGAGGTTATGTTT...TGATAGTTGCTGTTTTGGAGTAGAATTGATCAGGTTTAAGTCATCCTGCTCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGCCAACAGAGCGGGTTTaGTTATCTTTTGTTACTAAA +
Preference number: 4 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKPTERV*LSFVTK
Trigger: TTTAGTAACAAAAGATAATCAAACCCGCTCTGTTGG...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp GAAAAGAGTCCTTCTGCTTTCGCTTCCTGGAGCTTAAGAAGAAAAGAGGAATTACTCTACCCTGATTTCTaGGAGTCTACAGCAATATAT +
Preference number: 4 (lower is better)
Translates to: EKSPSAFASWSLRRKEELLYPDF*ESTAIY
Trigger: ATATATTGCTGTAGACTCTCAGAAATCAGGGTAGAG...TAATTCCTCTTTTCTTCTTAAGCTCCAGGAAGCGAAAGCAGAAGGACTCTTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR GCA 90 bp GCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGAAGCTTCCTGAAGTCTaGATCTCTGTTCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: ATFPPLRTIRECLQLYNRKLPEV*ISVHQF
Trigger: AAACTGATGAACAGAGATGCAGACTTCAGGAAGCTT...CCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp TTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGTTTCTGTATACAACAGGTTTCTaGAGACCCTGTGGTAACTTC +
Preference number: 4 (lower is better)
Translates to: FPPLRTIRECLQLYNRFLYTTGF*RPCGNF
Trigger: GAAGTTACCACAGGGTCTGCAGAAACCTGTTGTATA...CAGAAACCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp CATGAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGATTCACTCATTAAACTaGTCAAAGGAAAAGCTCTAC +
Preference number: 4 (lower is better)
Translates to: HEPFLQRIQPREESGWHKIHSLN*SKEKLY
Trigger: GTAGAGCTTTTCCTTTGAGCAGTTTAATGAGTGAAT...CTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR TCA 90 bp TTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGTTTCTGCCATTGAGCCTGGCCTaGGAATTTTCTTTAATTTCA +
Preference number: 4 (lower is better)
Translates to: FPPLRTIRECLQLYNRFLPLSLA*EFSLIS
Trigger: TGAAATTAAAGAAAATTCTCAGGCCAGGCTCAATGG...CAGAAACCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR TCA 90 bp ATTGAAGAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCCTCTACCCTGATTTCTaGGAGTCTACAGCAATATAT +
Preference number: 4 (lower is better)
Translates to: IEENTTKQLTKGSLSNTCLYPDF*ESTAIY
Trigger: ATATATTGCTGTAGACTCTCAGAAATCAGGGTAGAG...GCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTCTTCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR GCA 90 bp AGATATAAAAACTGGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTCCTTGGTCAATGACATaGTCATCAGCTTTGACTATC +
Preference number: 4 (lower is better)
Translates to: RYKNWVGVIFTSGLMNGPPWSMT*SSALTI
Trigger: GATAGTCAAAGCTGATGAGCATGTCATTGACCAAGG...AGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp TTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGTTTCTGTTGAAGGTGACTGTGTaGGCCATCATTATCTACAAT +
Preference number: 4 (lower is better)
Translates to: FPPLRTIRECLQLYNRFLLKVTV*AIIIYN
Trigger: ATTGTAGATAATGATGGCCCACACAGTCACCTTCAA...CAGAAACCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR TCA 90 bp AGATATAAAAACTGGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTAAGTTCCCCGTTCTATaGCATAAAAGTTGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: RYKNWVGVIFTSGLMNGPKFPVL*HKSCLH
Trigger: ATGGAGACAACTTTTATGTCATAGAACGGGGAACTT...AGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR GCA 90 bp AGATATAAAAACTGGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTAAGCTTCCTGAAGTCTaGATCTCTGTTCATCAGTTT +
Preference number: 4 (lower is better)
Translates to: RYKNWVGVIFTSGLMNGPKLPEV*ISVHQF
Trigger: AAACTGATGAACAGAGATGCAGACTTCAGGAAGCTT...AGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp AGATATAAAAACTGGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTAAAGTACAATGCCACTaGGCTACATATGTCCATATC +
Preference number: 4 (lower is better)
Translates to: RYKNWVGVIFTSGLMNGPKVQCH*ATYVHI
Trigger: GATATGGACATATGTAGCCCAGTGGCATTGTACTTT...AGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CCA 90 bp CCATCATTATCTACAATAGAAATGACTCAAGCCCTAGCATGTAATCTCTTAGGGTTACCAAGGTTGTGGTaGGTTATTTACTCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: PSLSTIEMTQALACNLLGLPRLW*VIYSGN
Trigger: ATTTCCAGAGTAAATAACCCACCACAACCTTGGTAA...CCCTAAGAGATTACATGCTAGGGCTTGAGTCATTTCTATTGTAGATAATGATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
3UTR CAA 72 bp TATCAGGCACTTAAATTGTTGGAGAGACATGCCGTTTaGAACCAAAGATATAAAAACTGGGTTGGAGTAATC +
Preference number: 4 (lower is better)
Translates to: YQALKLLERHAV*NQRYKNWVGVI
Trigger: GATTACTCCAACCCAGTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTCCAACAATTTAAGTGCCTGATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS TCA 90 bp CGGCGGGCAGGACTGAGGCTGGGGCGCGGGCCTCGCGCAGGCGGGTaGAGTACTCCACTGCGAATTCGACGAGGTCAGGCGGCTGCTGTC +
Preference number: 5 (lower is better)
Translates to: RRAGLRLGRGPRAGG*STPLRIRRGQAAAV
Trigger: GACAGCAGCCGCCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGGCCCGCGCCCCAGCCTCAGTCCTGCCCGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000419216.1
ENST00000454963.5
CDS-3UTR CAA 90 bp CTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGACGTCGCGCCGCTCTTaGGCCGGCTCTGCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: LLSMRLNRQCRACLMWTMTSRRS*AGSAFP
Trigger: CGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACGT...CATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp CAGGAAGGTATTTGGGCTGGACAAAGTGATAGCAACCCTCCAGACCCTGGCTCCGAAGGGATAGACGGGTaGGGCCGCCGGCGGCCACTG +
Preference number: 5 (lower is better)
Translates to: QEGIWAGQSDSNPPDPGSEGIDG*GRRRPL
Trigger: CAGTGGCCGCCGGCGGCCCAACCCGTCTATCCCTTC...GGAGCCAGGGTCTGGAGGGTTGCTATCACTTTGTCCAGCCCAAATACCTTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp TCCCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCGAAGGGATAGACGGGTaGGGCCGCCGGCGGCCACTG +
Preference number: 5 (lower is better)
Translates to: SLSITVGLETAVMCAAVSEGIDG*GRRRPL
Trigger: CAGTGGCCGCCGGCGGCCCAACCCGTCTATCCCTTC...GCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp GTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGGGGTGTACGTCGCGCCGCTCTTaGGCCGGCTCTGCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: VLWLTRRFWCHTKKALGCTSRRS*AGSAFP
Trigger: CGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACGT...ACACCCCAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp CCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGGACTCGCTGTCCCCTTaGGCGTCGGCGACACGGTCC +
Preference number: 5 (lower is better)
Translates to: PKHHCGFGDSCNVCSCQQDSLSP*ASATRS
Trigger: GGACCGTGTCGCCGACGCCAAAGGGGACAGCGAGTC...CTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp TCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAGACTCGCTGTCCCCTTaGGCGTCGGCGACACGGTCC +
Preference number: 5 (lower is better)
Translates to: SFREFNQEKRVGGISWGPDSLSP*ASATRS
Trigger: GGACCGTGTCGCCGACGCCAAAGGGGACAGCGAGTC...TGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp ATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTGGGACCTACTGCCCGAGGTaGCCCAGATCCACGCTGGAG +
Preference number: 5 (lower is better)
Translates to: MLPQLALWYRQVSLSKCGTYCPR*PRSTLE
Trigger: CTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGT...CCCACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CAA 90 bp CCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGACGTCGCGCCGCTCTTaGGCCGGCTCTGCGTTTCCG +
Preference number: 5 (lower is better)
Translates to: PFLQRIQPREESGWHKLGTSRRS*AGSAFP
Trigger: CGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACGT...CCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp CACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGCTTGGCATGCCACCTTaGATTCCCCATGCTACTGCC +
Preference number: 5 (lower is better)
Translates to: HMLLSMRLNRQCRACLMWLGMPP*IPHATA
Trigger: GGCAGTAGCATGGGGAATCAAAGGTGGCATGCCAAG...CCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS-3UTR CAA 90 bp TGGAGTCTTGCACTGTCACCCGGGGTGGAATACAATGGTGCAATCTCGGCTCACCAGCTCACTGTTGCCTaGACCTCCTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: WSLALSPGVEYNGAISAHQLTVA*TSWAQV
Trigger: CACTTGAGCCCAGGAGGTCAAGGCAACAGTGAGCTG...GTGAGCCGAGATTGCACCATTGTATTCCACCCCGGGTGACAGTGCAAGACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACTGCTACTGCCCGAGGTaGCCCAGATCCACGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SGWHKLGAKRKALRNILYCYCPR*PRSTLE
Trigger: CTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGCA...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS TCA 90 bp CAGGGCTTGCCTGATGTGGACAATGTGGATACCTCAGCCCTGAGTTaGACTTGGCATGCCACCTTTGATTCCCCATGCTACTGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: QGLPDVDNVDTSALS*TWHATFDSPCYCPR
Trigger: CCTCGGGCAGTAGCATGGGGAATCAAAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGTATCCACATTGTCCACATCAGGCAAGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS-3UTR CAA 90 bp CCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGGAGGCAGCTCTGGGTTaGTTGGTGACCAGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: PKHHCGFGDSCNVCSCQQEAALG*LVTRAS
Trigger: GCTTGCCCTGGTCACCAACAAACCCAGAGCTGCCTC...CTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp TGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCATCCAACCTACTGCCCGAGGTaGCCCAGATCCACGCTGGAG +
Preference number: 5 (lower is better)
Translates to: WHKLGAKRKALRNILYHPTYCPR*PRSTLE
Trigger: CTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGT...TGGATGGTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp AGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATCCGTCAGTGCAGGGCTaGCCTGATGTGGACAATGTG +
Preference number: 5 (lower is better)
Translates to: REESGWHKLGAKRKALRNPSVQG*PDVDNV
Trigger: CACATTGTCCACATCAGGCAAGCCCTGCACTGACGG...ATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTTCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS GCA 90 bp TTGGTACAGGCAGGTGTCTCTGTCCAAATGTGGGCAAGATCAAACTaGAACAAGGCGCTTCCTTTGGTCACCTACTGCCCGAGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: LVQAGVSVQMWARSN*NKALPLVTYCPRLP
Trigger: GGGCAACCTCGGGCAGTAGGTGACCAAAGGAAGCGCCTTGTTGCAGTTTGATCTTGCCCACATTTGGACAGAGACACCTGCCTGTACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS CCA 90 bp CGCTTCCTTTGGTCACCTACTGCCCGAGGTTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCAGCTGTTCCTCATAGTGTGAGATGT +
Preference number: 5 (lower is better)
Translates to: RFLWSPTARGCPDPR*SQTSSPAVPHSVRC
Trigger: ACATCTCACACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGACCAAAGGAAGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CAA 90 bp CTAGATTTCATATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTGAGGCAGCTCTGGGTTaGTTGGTGACCAGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: LDFICSHSWPFGTGRCLCEAALG*LVTRAS
Trigger: GCTTGCCCTGGTCACCAACAAACCCAGAGCTGCCTC...ACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CAA 90 bp CACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGTACTCTGGAAATATCTaGGTCACACTGTCCGTGGCA +
Preference number: 5 (lower is better)
Translates to: HMLLSMRLNRQCRACLMWYSGNI*VTLSVA
Trigger: TGCCACGGACAGTGTGACCAAGATATTTCCAGAGTA...CCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp GCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATCTTGGCATGCCACCTTaGATTCCCCATGCTGCAAAA +
Preference number: 5 (lower is better)
Translates to: APLHEAQPSVQGLPDVDNLGMPP*IPHAAK
Trigger: TTTTGCAGCATGGGGAATCAAAGGTGGCATGCCAAG...ATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp AGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTCTACCCGTCAGTGCAGGGCTaGCCTGATGTGGACAATGTG +
Preference number: 5 (lower is better)
Translates to: SGWHKLGAKRKALRNILYPSVQG*PDVDNV
Trigger: CACATTGTCCACATCAGGCAAGCCCTGCACTGACGG...GTAGAGAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp GGTCCTAGATTTCATATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTAACAAGGCGCTTCCTTaGGTCACCTACTGCCCGAGG +
Preference number: 5 (lower is better)
Translates to: GPRFHMLPQLALWYRQVSNKALP*VTYCPR
Trigger: CCTCGGGCAGTAGGTGACCAAAGGAAGCGCCTTGTT...AGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATGAAATCTAGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CAA 90 bp CATATGCTCCCACAGTTGGCCCTTTGGTACAGGCAGGTGTCTCTGTCCAAATGTCCCACAGTTGGCCCTTaGGTACAGGCAGGTGTCTCT +
Preference number: 5 (lower is better)
Translates to: HMLPQLALWYRQVSLSKCPTVGP*VQAGVS
Trigger: AGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGG...ACATTTGGACAGAGACACCTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS CCA 90 bp CCTTTGATTCCCCATGCTACTGCCCGAGGTTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCAGCTGTTCCTCATAGTGTGAGATGT +
Preference number: 5 (lower is better)
Translates to: PLIPHATARGCPDPR*SQTSSPAVPHSVRC
Trigger: ACATCTCACACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGCATGGGGAATCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS-3UTR CAA 90 bp CCTGAGCAGGATGACTTAAACCTGATCAATTCTACTCCAAAACAGCAACTATCAGACTCGCTGTCCCCTTaGGCGTCGGCGACACGGTCC +
Preference number: 5 (lower is better)
Translates to: PEQDDLNLINSTPKQQLSDSLSP*ASATRS
Trigger: GGACCGTGTCGCCGACGCCAAAGGGGACAGCGAGTC...TGATAGTTGCTGTTTTGGAGTAGAATTGATCAGGTTTAAGTCATCCTGCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp TGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTACCTACTGCCCGAGGTaGCCCAGATCCACGCTGGAG +
Preference number: 5 (lower is better)
Translates to: CLFSVCVLWLTRRFWCHTTYCPR*PRSTLE
Trigger: CTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGT...AGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR CAA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCTACCTCAGCCCTGAGTaGAACTTGGCATGCCACCTT +
Preference number: 5 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFYLSPE*NLACHL
Trigger: AAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGTA...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp GTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGACCTACTGCCCGAGGTaGCCCAGATCCACGCTGGAG +
Preference number: 5 (lower is better)
Translates to: VGVIFTSGLMNGPSEAKWTYCPR*PRSTLE
Trigger: CTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGT...CCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
CDS-3UTR CAA 90 bp CCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGACAATGTGGAGGAATTACCAAGGTaGTGGTGGGTTATTTACTCT +
Preference number: 5 (lower is better)
Translates to: PLHEAQPSVQGLPDVDNVEELPR*WWVIYS
Trigger: AGAGTAAATAACCCACCACAACCTTGGTAATTCCTC...CACATTGTCCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp ACCAGTTTATTGGGCCCTAGTGAGTCCCAAGATTTCCATCTACCAGTTGCTTGGCATATGCTCCCACAGTaGGCCCTTTGGTACAGGCAG +
Preference number: 5 (lower is better)
Translates to: TSLLGPSESQDFHLPVAWHMLPQ*ALWYRQ
Trigger: CTGCCTGTACCAAAGGGCCAACTGTGGGAGCATATG...CCAAGCAACTGGTAGATGGAAATCTTGGGACTCACTAGGGCCCAATAAACTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS CCA 90 bp TCTCCAAAGTACTGCCCCTTATGGCAGCGGGCAATCTCGACCTCCTaGTTCCCACCATCCTTGTTTGATTTAGTCCTGCTTCTAATCAAG +
Preference number: 5 (lower is better)
Translates to: SPKYCPLWQRAISTS*FPPSLFDLVLLLIK
Trigger: CTTGATTAGAAGCAGGACTAAATCAAACAAGGATGGTGGGAACCAGGAGGTCGAGATTGCCCGCTGCCATAAGGGGCAGTACTTTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp GAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTGAGGCAGCTCTGGGTTaGTTGGTGACCAGGGCAAGC +
Preference number: 5 (lower is better)
Translates to: ENTTKQLTKGSLSNTCSSEAALG*LVTRAS
Trigger: GCTTGCCCTGGTCACCAACAAACCCAGAGCTGCCTC...AGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp GATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTATCAGGCACTTAAATaGTTGGAGAGACATGCCGTT +
Preference number: 5 (lower is better)
Translates to: DLFPTHAPLHEAQPSVQGYQALK*LERHAV
Trigger: AACGGCATGTCTCTCCAACAATTTAAGTGCCTGATA...GCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCAGCATCACTGTGGGTTaGGAGACAGCTGTAATGTGT +
Preference number: 5 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFSITVG*ETAVMC
Trigger: ACACATTACAGCTGTCTCCAAACCCACAGTGATGCT...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp TGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTCAGCTCACTGTTGCCTaGACCTCCTGGGCTCAAGTG +
Preference number: 5 (lower is better)
Translates to: CLFSVCVLWLTRRFWCHTQLTVA*TSWAQV
Trigger: CACTTGAGCCCAGGAGGTCAAGGCAACAGTGAGCTG...AGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp CACATGCTCCTCTCCATGAGGCTCAACCGTCAGTGCAGGGCTTGCCTGATGTGGTGTATCTTGGCAAGATaGGTTTACAAGTTCATGACA +
Preference number: 5 (lower is better)
Translates to: HMLLSMRLNRQCRACLMWCILAR*VYKFMT
Trigger: TGTCATGAACTTGTAAACCAATCTTGCCAAGATACA...CCACATCAGGCAAGCCCTGCACTGACGGTTGAGCCTCATGGAGAGGAGCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp GTTGCCCAGATCCACGCTGGAGCCAAACATCTTCACCAGCTGTTCCTCATAGTGAAGCCTCTCGAATGCTaGTACATCCATAACCTGCTT +
Preference number: 5 (lower is better)
Translates to: VAQIHAGAKHLHQLFLIVKPLEC*YIHNLL
Trigger: AAGCAGGTTATGGATGTACAAGCATTCGAGAGGCTT...CACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000438535.1
CDS-3UTR CAA 90 bp TTCCACCTCAGCCTCCTAAGTATTTGGGACTACATGCATGCATCACCACACCTGCATGGCATCGAGAACTaGAGAAAGCTGTTCCTGATC +
Preference number: 5 (lower is better)
Translates to: FHLSLLSIWDYMHASPHLHGIEN*RKLFLI
Trigger: GATCAGGAACAGCTTTCTCAAGTTCTCGATGCCATG...CAGGTGTGGTGATGCATGCATGTAGTCCCAAATACTTAGGAGGCTGAGGTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp CCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGCATGGCATCGAGAACTaGAGAAAGCTGTTCCTGATC +
Preference number: 5 (lower is better)
Translates to: PFLQRIQPREESGWHKLGHGIEN*RKLFLI
Trigger: GATCAGGAACAGCTTTCTCAAGTTCTCGATGCCATG...CCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp TCTCTGTCCAAATGTGGGCAAGATCAAACTGCAACAAGGCGCTTCCTTTGGTCATCAGCTACCAGTTTATaGGGCCCTAGTGAGTCCCAA +
Preference number: 5 (lower is better)
Translates to: SLSKCGQDQTATRRFLWSSATSL*GPSESQ
Trigger: TTGGGACTCACTAGGGCCCAATAAACTGGTAGCTGA...TGACCAAAGGAAGCGCCTTGTTGCAGTTTGATCTTGCCCACATTTGGACAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CAA 90 bp ATAACCACAGCAATGGCAGCAGTGGCGGCAACGGCAGGAACAGTTCTGTCATGTACATGCTCATCAGCTTaGACTATCCTTTCAAACATG +
Preference number: 5 (lower is better)
Translates to: ITTAMAAVAATAGTVLSCTCSSA*TILSNM
Trigger: CATGTTTGAAAGGATAGTCAAAGCTGATGAGCATGT...ACATGACAGAACTGTTCCTGCCGTTGCCGCCACTGCTGCCATTGCTGTGGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp GGGCTACATATGTCCATATCATCCACCACCATTTCCCACTGTAAAACCAAAGGCAAACTGGTGTGGTTCTaGTCTGCTAAGGGCAAGACC +
Preference number: 5 (lower is better)
Translates to: GLHMSISSTTISHCKTKGKLVWF*SAKGKT
Trigger: GGTCTTGCCCTTAGCAGACAAGAACCACACCAGTTT...GCCTTTGGTTTTACAGTGGGAAATGGTGGTGGATGATATGGACATATGTAGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp TGTCTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTTACCTCAGCCCTGAGTaGAACTTGGCATGCCACCTT +
Preference number: 5 (lower is better)
Translates to: CLFSVCVLWLTRRFWCHTYLSPE*NLACHL
Trigger: AAGGTGGCATGCCAAGTTCAACTCAGGGCTGAGGTA...AGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp AAATTTTCTGCTCTAACATGGGTCCCACGGACCTATCAGTCTGCTCTGGGGTGCCCATTTCTTGCGACTTaGCTGCTGAATTCACTCATT +
Preference number: 5 (lower is better)
Translates to: KFSALTWVPRTYQSALGCPFLAT*LLNSLI
Trigger: AATGAGTGAATTCAGCAGCAAAGTCGCAAGAAATGG...GCACCCCAGAGCAGACTGATAGGTCCGTGGGACCCATGTTAGAGCAGAAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp GTGTCTCTGTCCAAATGTGGGCAAGATCAAACTGCAACAAGGCGCTTCCTTTGGCCATCTACCAGTTGCTaGGGTCCTAGATTTCATATG +
Preference number: 5 (lower is better)
Translates to: VSLSKCGQDQTATRRFLWPSTSC*GPRFHM
Trigger: CATATGAAATCTAGGACCCAAGCAACTGGTAGATGG...CCAAAGGAAGCGCCTTGTTGCAGTTTGATCTTGCCCACATTTGGACAGAGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS-3UTR CAA 90 bp TCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGGGGGCCAGAGCATGTTTATACTTaGGACTTTGTATCAGGCACT +
Preference number: 5 (lower is better)
Translates to: SFREFNQEKRVGGISWGPEHVYT*DFVSGT
Trigger: AGTGCCTGATACAAAGTCCAAAGTATAAACATGCTC...TGGCCCCCAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp CCTAAGCATCACTGTGGGTTTGGAGACAGCTGTAATGTGTGCAGCTGTCAGCAGGAGCATGTTTATACTTaGGACTTTGTATCAGGCACT +
Preference number: 5 (lower is better)
Translates to: PKHHCGFGDSCNVCSCQQEHVYT*DFVSGT
Trigger: AGTGCCTGATACAAAGTCCAAAGTATAAACATGCTC...CTGCTGACAGCTGCACACATTACAGCTGTCTCCAAACCCACAGTGATGCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp AAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTCCATGAGGCTCCAGCTACTCAGGAGGTaGAGGCAGGAGAATCACTTT +
Preference number: 5 (lower is better)
Translates to: KTVNKGISFQHMLLSMRLQLLRR*RQENHF
Trigger: AAAGTGATTCTCCTGCCTCAACCTCCTGAGTAGCTG...GAGCCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp AAGAGAGTGGGTGGCATAAGCTGGGGGCCAAAAGGAAGGCTCTCAGGAATATTCGAGAGACATGCCGTTTaGAACCAAAGATATAAAAAC +
Preference number: 5 (lower is better)
Translates to: KRVGGISWGPKGRLSGIFERHAV*NQRYKN
Trigger: GTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTC...GAATATTCCTGAGAGCCTTCCTTTTGGCCCCCAGCTTATGCCACCCACTCTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp TTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGCAGCTACTCAGGAGGTaGAGGCAGGAGAATCACTTT +
Preference number: 5 (lower is better)
Translates to: FSVCVLWLTRRFWCHTKKQLLRR*RQENHF
Trigger: AAAGTGATTCTCCTGCCTCAACCTCCTGAGTAGCTG...CTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp AGATATAAAAACTGGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTGTTGCCCAGGATGGTTaGGAACTCCTGGGCTCAAGC +
Preference number: 5 (lower is better)
Translates to: RYKNWVGVIFTSGLMNGPVAQDG*ELLGSS
Trigger: GCTTGAGCCCAGGAGTTCCAAACCATCCTGGGCAAC...AGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp GTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGAAGGCTCTGACATGCTCATCAGCTTaGACTATCCTTTCAAACATG +
Preference number: 5 (lower is better)
Translates to: VCVLWLTRRFWCHTKKALTCSSA*TILSNM
Trigger: CATGTTTGAAAGGATAGTCAAAGCTGATGAGCATGT...CAGAGCCTTCTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp CTGTTTTCTGTATGTGTTCTGTGGCTGACCAGAAGGTTTTGGTGTCACACTAAGCAGGCACTTAAATTGTaGGAGAGACATGCCGTTTTG +
Preference number: 5 (lower is better)
Translates to: LFSVCVLWLTRRFWCHTKQALKL*ERHAVL
Trigger: CAAAACGGCATGTCTCTCCAACAATTTAAGTGCCTG...CTTAGTGTGACACCAAAACCTTCTGGTCAGCCACAGAACACATACAGAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp TTCCACCTCAGCCTCCTAAGTATTTGGGACTACATGCATGCATCACCACACCTGAAAAGAACATCAACCTaGTTTATGGCAAACAGTGAC +
Preference number: 5 (lower is better)
Translates to: FHLSLLSIWDYMHASPHLKRTST*FMANSD
Trigger: GTCACTGTTTGCCATAAACAAGGTTGATGTTCTTTT...CAGGTGTGGTGATGCATGCATGTAGTCCCAAATACTTAGGAGGCTGAGGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp CTGAAGGCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACCATGGCATCGAGAACTaGAGAAAGCTGTTCCTGATC +
Preference number: 5 (lower is better)
Translates to: LKATFPPLRTIRECLQLYHGIEN*RKLFLI
Trigger: GATCAGGAACAGCTTTCTCAAGTTCTCGATGCCATG...GTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGCCTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp AAAGTACAATGCCACTGGGCTACATATGTCCATATCATCCACCACCATTTCCCAGCTACATTTCCTCCTTaGAGAACCATTAGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: KVQCHWATYVHIIHHHFPATFPP*RTIREC
Trigger: ACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGC...TGGGAAATGGTGGTGGATGATATGGACATATGTAGCCCAGTGGCATTGTACTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp GCTACATTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGATGCTGCAAAAAGAATaGGAACGCTGTCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: ATFPPLRTIRECLQLYNRMLQKE*ERCQVL
Trigger: CAGGACCTGACAGCGTTCCAATTCTTTTTGCAGCAT...CCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000265563.13
CDS-3UTR CAA 90 bp GGGCTACATATGTCCATATCATCCACCACCATTTCCCACTGTAAAACCAAAGGCGAGAGACATGCCGTTTaGAACCAAAGATATAAAAAC +
Preference number: 5 (lower is better)
Translates to: GLHMSISSTTISHCKTKGERHAV*NQRYKN
Trigger: GTTTTTATATCTTTGGTTCAAAACGGCATGTCTCTC...GCCTTTGGTTTTACAGTGGGAAATGGTGGTGGATGATATGGACATATGTAGCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp GTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTCAGAAGCAAAGTGGGCTACATTTCCTCCTTaGAGAACCATTAGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: VGVIFTSGLMNGPSEAKWATFPP*RTIREC
Trigger: ACACTCTCTAATGGTTCTCAAAGGAGGAAATGTAGC...CCACTTTGCTTCTGAAGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp TTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGTTTCTGAGCATCACTGTGGGTTaGGAGACAGCTGTAATGTGT +
Preference number: 5 (lower is better)
Translates to: FPPLRTIRECLQLYNRFLSITVG*ETAVMC
Trigger: ACACATTACAGCTGTCTCCAAACCCACAGTGATGCT...CAGAAACCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp GAACCTTTCCTTCAGAGAATTCAACCAAGAGAAGAGAGTGGGTGGCATAAGCTGATGAGCTCTAATTCATaGAAGAGAACACCACAAAAC +
Preference number: 5 (lower is better)
Translates to: EPFLQRIQPREESGWHKLMSSNS*KRTPQN
Trigger: GTTTTGTGGTGTTCTCTTCAATGAATTAGAGCTCAT...CAGCTTATGCCACCCACTCTCTTCTCTTGGTTGAATTCTCTGAAGGAAAGGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp GAGAACACCACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTACATGCTCATCAGCTTaGACTATCCTTTCAAACATG +
Preference number: 5 (lower is better)
Translates to: ENTTKQLTKGSLSNTCSSTCSSA*TILSNM
Trigger: CATGTTTGAAAGGATAGTCAAAGCTGATGAGCATGT...AGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTGGTGTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp TTTCCTCCTTTGAGAACCATTAGAGAGTGTCTACAGTTATACAACAGGTTTCTGCAGGCACTTAAATTGTaGGAGAGACATGCCGTTTTG +
Preference number: 5 (lower is better)
Translates to: FPPLRTIRECLQLYNRFLQALKL*ERHAVL
Trigger: CAAAACGGCATGTCTCTCCAACAATTTAAGTGCCTG...CAGAAACCTGTTGTATAACTGTAGACACTCTCTAATGGTTCTCAAAGGAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS-3UTR CAA 90 bp CACAAAACAGTTAACAAAGGGATCTCTTTCCAACACATGCTCCTCTCCATGAGGATGAGCTCTAATTCATaGAAGAGAACACCACAAAAC +
Preference number: 5 (lower is better)
Translates to: HKTVNKGISFQHMLLSMRMSSNS*KRTPQN
Trigger: GTTTTGTGGTGTTCTCTTCAATGAATTAGAGCTCAT...CCTCATGGAGAGGAGCATGTGTTGGAAAGAGATCCCTTTGTTAACTGTTTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000454963.5
CDS-3UTR CAA 90 bp AGATATAAAAACTGGGTTGGAGTAATCTTTACAAGTGGTCTAATGAATGGGCCTTATCAGGCACTTAAATaGTTGGAGAGACATGCCGTT +
Preference number: 5 (lower is better)
Translates to: RYKNWVGVIFTSGLMNGPYQALK*LERHAV
Trigger: AACGGCATGTCTCTCCAACAATTTAAGTGCCTGATA...AGGCCCATTCATTAGACCACTTGTAAAGATTACTCCAACCCAGTTTTTATATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265563.13
ENST00000296446.12
CDS CCA 72 bp TCCGGGCCGCGCAACCCTACGCTACCACGGCCGACCTaGCACCGCCGCCGCTGTCACTGGGCAGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: SGPRNPTLPRPT*HRRRCHWAAAA
Trigger: GGCGGCGGCTGCCCAGTGACAGCGGCGGCGGTGCCAGGTCGGCCGTGGTAGCGTAGGGTTGCGCGGCCCGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000419216.1
CDS GCA 72 bp GCCCCGGCTCACGTCGCGCCGCTCTTTGGCCGGCTCTaGGTTTCCGGGCCGCGCAACCCTACGCTACCACGG +
Preference number: 6 (lower is better)
Translates to: APAHVAPLFGRL*VSGPRNPTLPR
Trigger: CCGTGGTAGCGTAGGGTTGCGCGGCCCGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACGTGAGCCGGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000419216.1
ENST00000454963.5
CDS CCA 72 bp TTCGCGCACGGCCCCGGCTCACGTCGCGCCGCTCTTTaGCCGGCTCTGCGTTTCCGGGCCGCGCAACCCTAC +
Preference number: 6 (lower is better)
Translates to: FAHGPGSRRAAL*PALRFRAAQPY
Trigger: GTAGGGTTGCGCGGCCCGGAAACGCAGAGCCGGCCAAAGAGCGGCGCGACGTGAGCCGGGGCCGTGCGCGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000419216.1
ENST00000454963.5
CDS CCA 72 bp CCAAGTCCTCGTCCTCCTCCGACTCGCTGTCCCCTTTaGCGTCGGCGACACGGTCCGGGCCGGGTTCTGGCG +
Preference number: 6 (lower is better)
Translates to: PSPRPPPTRCPL*RRRHGPGRVLA
Trigger: CGCCAGAACCCGGCCCGGACCGTGTCGCCGACGCCAAAGGGGACAGCGAGTCGGAGGAGGACGAGGACTTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000419216.1
ENST00000454963.5
CDS TCA 72 bp GGACTGAGGCTGGGGCGCGGGCCTCGCGCAGGCGGGTaGAGTACTCCACTGCGAATTCGACGAGGTCAGGCG +
Preference number: 6 (lower is better)
Translates to: GLRLGRGPRAGG*STPLRIRRGQA
Trigger: CGCCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGGCCCGCGCCCCAGCCTCAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000419216.1
ENST00000454963.5
CDS GCA 72 bp GGCGCGGGCCTCGCGCAGGCGGGTGAAGTACTCCACTaGGAATTCGACGAGGTCAGGCGGCTGCTGTCGCAG +
Preference number: 6 (lower is better)
Translates to: GAGLAQAGEVLH*EFDEVRRLLSQ
Trigger: CTGCGACAGCAGCCGCCTGACCTCGTCGAATTCGCAGTGGAGTACTTCACCCGCCTGCGCGAGGCCCGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000419216.1
ENST00000454963.5
CDS CAA 72 bp TCCAAGTCCTCGTCCTCCTCCGACTCGCTGTCCCCTTaGGCGTCGGCGACACGGTCCGGGCCGGGTTCTGGC +
Preference number: 6 (lower is better)
Translates to: SKSSSSSDSLSP*ASATRSGPGSG
Trigger: GCCAGAACCCGGCCCGGACCGTGTCGCCGACGCCAAAGGGGACAGCGAGTCGGAGGAGGACGAGGACTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000419216.1
ENST00000454963.5
CDS GCA 72 bp ACAAGGCGCTTCCTTTGGTCACCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGCCAAACATCTTCACCA +
Preference number: 6 (lower is better)
Translates to: TRRFLWSPTARG*PDPRWSQTSSP
Trigger: TGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGACCAAAGGAAGCGCCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS CCA 72 bp CCCCATGCTACTGCCCGAGGTTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCAGCTGTTCCTCATAGT +
Preference number: 6 (lower is better)
Translates to: PHATARGCPDPR*SQTSSPAVPHS
Trigger: ACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS GCA 72 bp ATGCCACCTTTGATTCCCCATGCTACTGCCCGAGGTTaGCCAGATCCACGCTGGAGCCAAACATCTTCACCA +
Preference number: 6 (lower is better)
Translates to: MPPLIPHATARG*PDPRWSQTSSP
Trigger: TGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGCATGGGGAATCAAAGGTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000454963.5
CDS CCA 72 bp TGGTCACCTACTGCCCGAGGTTGCCCAGATCCACGCTaGAGCCAAACATCTTCACCAGCTGTTCCTCATAGT +
Preference number: 6 (lower is better)
Translates to: WSPTARGCPDPR*SQTSSPAVPHS
Trigger: ACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCCAGCGTGGATCTGGGCAACCTCGGGCAGTAGGTGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS GCA 72 bp GCAGGTGTCTCTGTCCAAATGTGGGCAAGATCAAACTaGAACAAGGCGCTTCCTTTGGTCACCTACTGCCCG +
Preference number: 6 (lower is better)
Translates to: AGVSVQMWARSN*NKALPLVTYCP
Trigger: CGGGCAGTAGGTGACCAAAGGAAGCGCCTTGTTGCAGTTTGATCTTGCCCACATTTGGACAGAGACACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457914.5
CDS TCA 72 bp GGAGCCAAACATCTTCACCAGCTGTTCCTCATAGTGTaGGATGTTCCTCTTCATGATGTCCATGCAGGGCCC +
Preference number: 6 (lower is better)
Translates to: GAKHLHQLFLIV*DVPLHDVHAGP
Trigger: GGGCCCTGCATGGACATCATGAAGAGGAACATCTCACACTATGAGGAACAGCTGGTGAAGATGTTTGGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000438535.1
ENST00000454963.5
ENST00000457914.5
CDS CAA 90 bp AGGGAGCCTTCTGAGGTAGCAACAATGGTAGCAGCTCTCGGGGTGTaGTACATCAGAGCTAGTTCTCCAAAACTGCCACGGTTGTCATAT +
Preference number: 6 (lower is better)
Translates to: REPSEVATMVAALGV*YIRASSPKLPRLSY
Trigger: ATATGACAACCGTGGCAGTTTTGGAGAACTAGCTCTGATGTACAACACCCCGAGAGCTGCTACCATTGTTGCTACCTCAGAAGGCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000437821.2
ENST00000454963.5
CDS GCA 72 bp TCGGGGTGTTGTACATCAGAGCTAGTTCTCCAAAACTaGCACGGTTGTCATATTGACCAACAGAGCGGGTTT +
Preference number: 6 (lower is better)
Translates to: SGCCTSELVLQN*HGCHIDQQSGF
Trigger: AAACCCGCTCTGTTGGTCAATATGACAACCGTGGCAGTTTTGGAGAACTAGCTCTGATGTACAACACCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265563.13
ENST00000296446.12
ENST00000437821.2
ENST00000454963.5