Pregenerated sensors for PRKACB-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000271576Ensembl transcript IDs: ENST00000605506.1
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGAGCCGCCGCGTGGCGGGACGCAAGGAAAACCACCCGAGCCGCTaGACAGTATTCCGCGACTGCACTCCAGGGCACCGGGACCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: RSRRVAGRKENHPSR*TVFRDCTPGHRDRQ Trigger: CTGGCGGTCCCGGTGCCCTGGAGTGCAGTCGCGGAATACTGTTCAGCGGCTCGGGTGGTTTTCCTTGCGTCCCGCCACGCGGCGGCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 90 bp | TTCCTGTGGCCGATGCGGGGCAGATGCAGACCCAGAGGCCACCCTTaGGCGCGATCTCCAACCCGACGGTGCGGCTCCTCTCGGACCTGG | + |
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Preference number: 5 (lower is better) Translates to: FLWPMRGRCRPRGHP*ARSPTRRCGSSRTW Trigger: CCAGGTCCGAGAGGAGCCGCACCGTCGGGTTGGAGATCGCGCGCAAGGGTGGCCTCTGGGTCTGCATCTGCCCCGCATCGGCCACAGGAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 90 bp | CCGTGCCTAGGGACCAGGCTTTTCCTGTGGCCGATGCGGGGCAGATaGAGACCCAGAGGCCACCCTTGCGCGCGATCTCCAACCCGACGG | + |
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Preference number: 5 (lower is better) Translates to: PCLGTRLFLWPMRGR*RPRGHPCARSPTRR Trigger: CCGTCGGGTTGGAGATCGCGCGCAAGGGTGGCCTCTGGGTCTGCATCTGCCCCGCATCGGCCACAGGAAAAGCCTGGTCCCTAGGCACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS CCA 90 bp | GCGATCTCCAACCCGACGGTGCGGCTCCTCTCGGACCTGGAGCTGTaGGGAGAAGGCAGCCTTTTAGTGAGGAGCCGCCGCGTGGCGGGA | + |
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Preference number: 5 (lower is better) Translates to: AISNPTVRLLSDLEL*GEGSLLVRSRRVAG Trigger: TCCCGCCACGCGGCGGCTCCTCACTAAAAGGCTGCCTTCTCCCCACAGCTCCAGGTCCGAGAGGAGCCGCACCGTCGGGTTGGAGATCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 90 bp | TGCAGACCCAGAGGCCACCCTTGCGCGCGATCTCCAACCCGACGGTaGGGCTCCTCTCGGACCTGGAGCTGTGGGGAGAAGGCAGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: CRPRGHPCARSPTRR*GSSRTWSCGEKAAF Trigger: AAAGGCTGCCTTCTCCCCACAGCTCCAGGTCCGAGAGGAGCCGCACCGTCGGGTTGGAGATCGCGCGCAAGGGTGGCCTCTGGGTCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS TCA 90 bp | AACAGTATTCCGCGACTGCACTCCAGGGCACCGGGACCGCCAGGGTaGGGAGGGACTCTGCGTTCTGCAAAGCTAGCGGTTCCCACTCCA | + |
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Preference number: 5 (lower is better) Translates to: NSIPRLHSRAPGPPG*GGTLRSAKLAVPTP Trigger: TGGAGTGGGAACCGCTAGCTTTGCAGAACGCAGAGTCCCTCCTCACCCTGGCGGTCCCGGTGCCCTGGAGTGCAGTCGCGGAATACTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS TCA 90 bp | TATTACATCCACAACACAGAACCAAACGTGGTGATGACACTGTTGTaGCACTGTTGCATGCTGACACAAAACCTCACAGCATCTAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: YYIHNTEPNVVMTLL*HCCMLTQNLTASSP Trigger: TGGACTAGATGCTGTGAGGTTTTGTGTCAGCATGCAACAGTGTCACAACAGTGTCATCACCACGTTTGGTTCTGTGTTGTGGATGTAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 72 bp | CCGATGCGGGGCAGATGCAGACCCAGAGGCCACCCTTaGGCGCGATCTCCAACCCGACGGTGCGGCTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PMRGRCRPRGHP*ARSPTRRCGSS Trigger: AGAGGAGCCGCACCGTCGGGTTGGAGATCGCGCGCAAGGGTGGCCTCTGGGTCTGCATCTGCCCCGCATCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS CAA 90 bp | TTTCCTGTGGCCGATGCGGGGCAGATGCAGACCCAGAGGCCACCCTaGCGCGCGATCTCCAACCCGACGGTGCGGCTCCTCTCGGACCTG | + |
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Preference number: 6 (lower is better) Translates to: FPVADAGQMQTQRPP*RAISNPTVRLLSDL Trigger: CAGGTCCGAGAGGAGCCGCACCGTCGGGTTGGAGATCGCGCGCAAGGGTGGCCTCTGGGTCTGCATCTGCCCCGCATCGGCCACAGGAAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 72 bp | AGAGGCCACCCTTGCGCGCGATCTCCAACCCGACGGTaGGGCTCCTCTCGGACCTGGAGCTGTGGGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RGHPCARSPTRR*GSSRTWSCGEK Trigger: CTTCTCCCCACAGCTCCAGGTCCGAGAGGAGCCGCACCGTCGGGTTGGAGATCGCGCGCAAGGGTGGCCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS TCA 72 bp | CGCGTGGCGGGACGCAAGGAAAACCACCCGAGCCGCTaGACAGTATTCCGCGACTGCACTCCAGGGCACCGG | + |
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Preference number: 6 (lower is better) Translates to: RVAGRKENHPSR*TVFRDCTPGHR Trigger: CCGGTGCCCTGGAGTGCAGTCGCGGAATACTGTTCAGCGGCTCGGGTGGTTTTCCTTGCGTCCCGCCACGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 72 bp | GGGACCAGGCTTTTCCTGTGGCCGATGCGGGGCAGATaGAGACCCAGAGGCCACCCTTGCGCGCGATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: GTRLFLWPMRGR*RPRGHPCARSP Trigger: TGGAGATCGCGCGCAAGGGTGGCCTCTGGGTCTGCATCTGCCCCGCATCGGCCACAGGAAAAGCCTGGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS CCA 72 bp | GAACCACGACCGTGCCTAGGGACCAGGCTTTTCCTGTaGCCGATGCGGGGCAGATGCAGACCCAGAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: EPRPCLGTRLFL*PMRGRCRPRGH Trigger: GTGGCCTCTGGGTCTGCATCTGCCCCGCATCGGCCACAGGAAAAGCCTGGTCCCTAGGCACGGTCGTGGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 72 bp | AATGTGCGAGAGAACGAAAAGCTCGAACCACGACCGTaGCTAGGGACCAGGCTTTTCCTGTGGCCGATGCGG | + |
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Preference number: 6 (lower is better) Translates to: NVRENEKLEPRP*LGTRLFLWPMR Trigger: CCGCATCGGCCACAGGAAAAGCCTGGTCCCTAGGCACGGTCGTGGTTCGAGCTTTTCGTTCTCTCGCACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS CCA 72 bp | TGTGACTGGGGCCTAATAACCCCGAGGACAACGTGGTaGGCTGAGCGAATACCTCAATGTGCGAGAGAACGA | + |
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Preference number: 6 (lower is better) Translates to: CDWGLITPRTTW*AERIPQCARER Trigger: TCGTTCTCTCGCACATTGAGGTATTCGCTCAGCCCACCACGTTGTCCTCGGGGTTATTAGGCCCCAGTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS CCA 72 bp | GCTTGTGACTGGGGCCTAATAACCCCGAGGACAACGTaGTGGGCTGAGCGAATACCTCAATGTGCGAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: ACDWGLITPRTT*WAERIPQCARE Trigger: TTCTCTCGCACATTGAGGTATTCGCTCAGCCCACCACGTTGTCCTCGGGGTTATTAGGCCCCAGTCACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS TCA 72 bp | CACAACACAGAACCAAACGTGGTGATGACACTGTTGTaGCACTGTTGCATGCTGACACAAAACCTCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: HNTEPNVVMTLL*HCCMLTQNLTA Trigger: TGCTGTGAGGTTTTGTGTCAGCATGCAACAGTGTCACAACAGTGTCATCACCACGTTTGGTTCTGTGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS CAA 72 bp | CAAATCCTGCTTCCACCAGATAATAGCTGTGTAACCTaGGGTAAGTCACTTCTTTGTGCCTTAATTTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QILLPPDNSCVT*GKSLLCALICS Trigger: GGAGCAAATTAAGGCACAAAGAAGTGACTTACCCAAGGTTACACAGCTATTATCTGGTGGAAGCAGGATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS TCA 72 bp | AACCACATCTCTCATAGGGTTCTTATGAGGAGCAAATaGGTTACTGCTTGTATAGAAGTTGTAATGCAGTAT | + |
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Preference number: 6 (lower is better) Translates to: NHISHRVLMRSK*VTACIEVVMQY Trigger: ATACTGCATTACAACTTCTATACAAGCAGTAACTCATTTGCTCCTCATAAGAACCCTATGAGAGATGTGGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 72 bp | ATTTCAAGTCAACAGGTATTCATAAAACACCTACTATaGCTGGTGCCTTGGGAACATAGAATAAATTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: ISSQQVFIKHLL*LVPWEHRINWE Trigger: TTCCCAATTTATTCTATGTTCCCAAGGCACCAGGCATAGTAGGTGTTTTATGAATACCTGTTGACTTGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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| CDS GCA 72 bp | CAATATAATACATTTCCTTGGGACGTATACTCACTATaGGTCTATCTCTTCAACTCAATGGGATTTCAAATG | + |
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Preference number: 6 (lower is better) Translates to: QYNTFPWDVYSL*VYLFNSMGFQM Trigger: CATTTGAAATCCCATTGAGTTGAAGAGATAGACGCATAGTGAGTATACGTCCCAAGGAAATGTATTATATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000605506.1 |
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