RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRKAA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000162409

Ensembl transcript IDs: ENST00000371244.9, ENST00000610361.1

Found 283 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAACTGATTCTTTCCCTCTATCTGCCCATGAGCAACAAAAAGCCTaGTGTAACAATGTTCCAGCTCTAATTGTGCTGGACTGCATCTCC +
Preference number: 1 (lower is better)
Translates to: TTDSFPLSAHEQQKA*CNNVPALIVLDCIS
Trigger: GGAGATGCAGTCCAGCACAATTAGAGCTGGAACATTGTTACAGCAGGCTTTTTGTTGCTCATGGGCAGATAGAGGGAAAGAATCAGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 90 bp GAGCAATTGATCACTGCTGGATACTTGTATGGTGTTAAAGCTTTATaGAGAGCTTTCTGGTCCTGCTTCCTCATCTGGAAATGGCAAAAA +
Preference number: 1 (lower is better)
Translates to: EQLITAGYLYGVKAL*RAFWSCFLIWKWQK
Trigger: TTTTTGCCATTTCCAGATGAGGAAGCAGGACCAGAAAGCTCTTCATAAAGCTTTAACACCATACAAGTATCCAGCAGTGATCAATTGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 90 bp GACTGTTCTTCCCCAGAGGAAAGGTGGTTTCCTATAAAGAGCAATTaGTCACTGCTGGATACTTGTATGGTGTTAAAGCTTTATGAAGAG +
Preference number: 1 (lower is better)
Translates to: DCSSPEERWFPIKSN*SLLDTCMVLKLYEE
Trigger: CTCTTCATAAAGCTTTAACACCATACAAGTATCCAGCAGTGATCAATTGCTCTTTATAGGAAACCACCTTTCCTCTGGGGAAGAACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 90 bp TGCTGTAACAATGTTCCAGCTCTAATTGTGCTGGACTGCATCTCCTaGAATCTTCTAAAAACCAACCACCTAGATTCACAAAATAGCTGT +
Preference number: 1 (lower is better)
Translates to: CCNNVPALIVLDCIS*NLLKTNHLDSQNSC
Trigger: ACAGCTATTTTGTGAATCTAGGTGGTTGGTTTTTAGAAGATTTCAGGAGATGCAGTCCAGCACAATTAGAGCTGGAACATTGTTACAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 90 bp TCATCACTCCAAATTTGTAATGCTTTGCTTCATGCCAAATGGATGTaGTGTTTCACCGTGTTTGGTTTTCTGGATGATTTTTGCCATTTG +
Preference number: 1 (lower is better)
Translates to: SSLQICNALLHAKWM*CFTVFGFLDDFCHL
Trigger: CAAATGGCAAAAATCATCCAGAAAACCAAACACGGTGAAACATCACATCCATTTGGCATGAAGCAAAGCATTACAAATTTGGAGTGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 90 bp AAATGTTCAAAACATTGTACAACCACAGATATTTGTGAACAGTCTTaGGAGCTGTATTTTGGTACATTAAGGCAGCTTCAGCCAACATTT +
Preference number: 1 (lower is better)
Translates to: KCSKHCTTTDICEQS*ELYFGTLRQLQPTF
Trigger: AAATGTTGGCTGAAGCTGCCTTAATGTACCAAAATACAGCTCTCAAGACTGTTCACAAATATCTGTGGTTGTACAATGTTTTGAACATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACCCTCTATCTGCCCATaGGCAACAAAAAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLPSICP*ATKSLL
Trigger: CAGCAGGCTTTTTGTTGCTCATGGGCAGATAGAGGG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAAACCACCCTTACATTaGGATGGTTCGCCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLKPPLH*DGSPVW
Trigger: CCACACTGGCGAACCATCTCAATGTAAGGGTGGTTT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAAACCACCCTTACATTaGGATGGTTCGCCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIKPPLH*DGSPVW
Trigger: CCACACTGGCGAACCATCTCAATGTAAGGGTGGTTT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACCCTTACATTGAGATaGTTCGCCAGTGTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTLTLR*FASVVC
Trigger: ACACACCACACTGGCGAACCATCTCAATGTAAGGGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGGGAGTGGCTTCCAATaGAGAATTAGCATTATGAGC +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLGSGFQ*RISIMS
Trigger: GCTCATAATGCTAATTCTTCATTGGAAGCCACTCCC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTTTGGGGCTAACAACTaGTTCTTTCCCTCTATCTGC +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIFGANN*FFPSIC
Trigger: GCAGATAGAGGGAAAGAATCAGTTGTTAGCCCCAAA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAATTAGCATTATGAGCTaGACCAGGACCCTAACACCT +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLISIMS*TRTLTP
Trigger: AGGTGTTAGGGTCCTGGTGCAGCTCATAATGCTAAT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCATTAGCATTATGAGCTaGACCAGGACCCTAACACCT +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIISIMS*TRTLTP
Trigger: AGGTGTTAGGGTCCTGGTGCAGCTCATAATGCTAAT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTGTTCAAAGCTTCCCTaGCCTATCAGGTTCAACAGT +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHICSKLP*PIRFNS
Trigger: ACTGTTGAACCTGATAGGGCAGGGAAGCTTTGAACA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATGTTCAAAGCTTCCCTaGCCTATCAGGTTCAACAGT +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLCSKLP*PIRFNS
Trigger: ACTGTTGAACCTGATAGGGCAGGGAAGCTTTGAACA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCACCCTTACATTGAGATaGTTCGCCAGTGTGGTGTGT +
Preference number: 2 (lower is better)
Translates to: LKLSQIATRPPSQIGELFTLTLR*FASVVC
Trigger: ACACACCACACTGGCGAACCATCTCAATGTAAGGGT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGGGAGTGGCTTCCAATaGAGAATTAGCATTATGAGC +
Preference number: 2 (lower is better)
Translates to: LKLSQIATRPPSQIGELFGSGFQ*RISIMS
Trigger: GCTCATAATGCTAATTCTTCATTGGAAGCCACTCCC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCATCTGCAAAGCCATATaGTGTGACACAACGCAAACT +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIICKAI*CDTTQT
Trigger: AGTTTGCGTTGTGTCACATCATATGGCTTTGCAGAT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACTGGACTGCATCTCCTaGAATCTTCTAAAAACCAAC +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLLDCIS*NLLKTN
Trigger: GTTGGTTTTTAGAAGATTTCAGGAGATGCAGTCCAG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCAGAGTTTACAACACTaGAATGTGGAAATTTGGGGC +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIQSLQH*NVEIWG
Trigger: GCCCCAAATTTCCACATTTCAGTGTTGTAAACTCTG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACAGAGTTTACAACACTaGAATGTGGAAATTTGGGGC +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLQSLQH*NVEIWG
Trigger: GCCCCAAATTTCCACATTTCAGTGTTGTAAACTCTG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAAAGCAAGGAGGTGTTaGCAAACCACCCTTACATTG +
Preference number: 2 (lower is better)
Translates to: LKLSQIATRPPSQIGELFKARRC*QTTLTL
Trigger: CAATGTAAGGGTGGTTTGGCAACACCTCCTTGCTTT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGAGCAACAAAAAGCCTaGTGTAACAATGTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIEQQKA*CNNVPA
Trigger: AGCTGGAACATTGTTACAGCAGGCTTTTTGTTGCTC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATTCCCAAAAGAGGTATaGACCCATTTAGAGAACCCA +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLFPKEV*THLENP
Trigger: TGGGTTCTCTAAATGGGTCCATACCTCTTTTGGGAA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR CAA 90 bp GTAATGCTTTGCTTCATGCCAAATGGATGTGATGTTTCACCGTGTTaGGTTTTCTGGATGATTTTTGCCATTTGCATTCCTCCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: VMLCFMPNGCDVSPC*VFWMIFAICIPPAA
Trigger: AGCTGCTGGAGGAATGCAAATGGCAAAAATCATCCAGAAAACCAAACACGGTGAAACATCACATCCATTTGGCATGAAGCAAAGCATTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGTAAAAATTACCTTTTaGTGCCACAAGATGGCAGTC +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLVKITF*CHKMAV
Trigger: GACTGCCATCTTGTGGCACCAAAAGGTAATTTTTAC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGTAAAAATTACCTTTTaGTGCCACAAGATGGCAGTC +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIVKITF*CHKMAV
Trigger: GACTGCCATCTTGTGGCACCAAAAGGTAATTTTTAC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGAGCTAAAACATCACTaGATTCCTTCTGTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLELKHH*IPSVSL
Trigger: CAGAGAAACAGAAGGAATCCAGTGATGTTTTAGCTC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAAAGAACCCAAACTGTaGCCATTAGTTCTCCTAAAA +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLKEPKL*PLVLLK
Trigger: TTTTAGGAGAACTAATGGTCACAGTTTGGGTTCTTT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAAAATTACCTTTTGGTaGCACAAGATGGCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLKITFW*HKMAVF
Trigger: AAAGACTGCCATCTTGTGGCACCAAAAGGTAATTTT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACAACACTGAAATGTaGAAATTTGGGGCTAACAAC +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIYNTEM*KFGANN
Trigger: GTTGTTAGCCCCAAATTTCCACATTTCAGTGTTGTA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTCTAACATTCTCATTTaGTTCTTGGCAGAACATACA +
Preference number: 2 (lower is better)
Translates to: IEALLPCLHWRKLFLAHISNILI*FLAEHT
Trigger: TGTATGTTCTGCCAAGAAGCAAATGAGAATGTTAGA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATCTAACATTCTCATTTaGTTCTTGGCAGAACATACA +
Preference number: 2 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLSNILI*FLAEHT
Trigger: TGTATGTTCTGCCAAGAAGCAAATGAGAATGTTAGA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR CAA 90 bp AACCTGAAAATTGTGGTTACCTGTTACATGACCACAGTCCTTCTGTaGAATACACTAGGCAGTATTTGTACAAATACTGTTAGAAAAACT +
Preference number: 2 (lower is better)
Translates to: NLKIVVTCYMTTVLL*NTLGSICTNTVRKT
Trigger: AGTTTTTCTAACAGTATTTGTACAAATACTGCCTAGTGTATTCAACAGAAGGACTGTGGTCATGTAACAGGTAACCACAATTTTCAGGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 72 bp GCAAAGCAAGGAGGTGTTGCCAAACCACCCTTACATTaGGATGGTTCGCCAGTGTGGTGTGTTAATCGTCTG +
Preference number: 3 (lower is better)
Translates to: AKQGGVAKPPLH*DGSPVWCVNRL
Trigger: CAGACGATTAACACACCACACTGGCGAACCATCTCAATGTAAGGGTGGTTTGGCAACACCTCCTTGCTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACAAACCACCCTTACATaGAGATGGTTCGCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLQTTLT*RWFASV
Trigger: CACACTGGCGAACCATCTCAATGTAAGGGTGGTTTG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR GCA 72 bp GATTTACCTACACCAAACAGCAAAGCAAGGAGGTGTTaGCAAACCACCCTTACATTGAGATGGTTCGCCAGT +
Preference number: 3 (lower is better)
Translates to: DLPTPNSKARRC*QTTLTLRWFAS
Trigger: ACTGGCGAACCATCTCAATGTAAGGGTGGTTTGGCAACACCTCCTTGCTTTGCTGTTTGGTGTAGGTAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCAAACCACCCTTACATaGAGATGGTTCGCCAGTGTG +
Preference number: 3 (lower is better)
Translates to: LKLSQIATRPPSQIGELFQTTLT*RWFASV
Trigger: CACACTGGCGAACCATCTCAATGTAAGGGTGGTTTG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR GCA 72 bp TCTTTCCCTCTATCTGCCCATGAGCAACAAAAAGCCTaGTGTAACAATGTTCCAGCTCTAATTGTGCTGGAC +
Preference number: 3 (lower is better)
Translates to: SFPLSAHEQQKA*CNNVPALIVLD
Trigger: GTCCAGCACAATTAGAGCTGGAACATTGTTACAGCAGGCTTTTTGTTGCTCATGGGCAGATAGAGGGAAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCAAAGCAAGGAGGTGTaGCCAAACCACCCTTACATT +
Preference number: 3 (lower is better)
Translates to: LKLSQIATRPPSQIGELFQSKEV*PNHPYI
Trigger: AATGTAAGGGTGGTTTGGCAACACCTCCTTGCTTTG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCACCACAGTCCTTCTGTaGAATACACTAGGCAGTATT +
Preference number: 3 (lower is better)
Translates to: IEALLPCLHWRKLFLAHITTVLL*NTLGSI
Trigger: AATACTGCCTAGTGTATTCAACAGAAGGACTGTGGT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACCACAGTCCTTCTGTaGAATACACTAGGCAGTATT +
Preference number: 3 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTTVLL*NTLGSI
Trigger: AATACTGCCTAGTGTATTCAACAGAAGGACTGTGGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR CCA 72 bp CCAAATGGATGTGATGTTTCACCGTGTTTGGTTTTCTaGATGATTTTTGCCATTTGCATTCCTCCAGCAGCT +
Preference number: 3 (lower is better)
Translates to: PNGCDVSPCLVF*MIFAICIPPAA
Trigger: AGCTGCTGGAGGAATGCAAATGGCAAAAATCATCCAGAAAACCAAACACGGTGAAACATCACATCCATTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGAACATACATTACTTTaGGCAAAGAGAAGCCTGTCA +
Preference number: 3 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLEHTLL*AKRSLS
Trigger: TGACAGGCTTCTCTTTGCCAAAAGTAATGTATGTTC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 72 bp ATCACTGCTGGATACTTGTATGGTGTTAAAGCTTTATaGAGAGCTTTCTGGTCCTGCTTCCTCATCTGGAAA +
Preference number: 3 (lower is better)
Translates to: ITAGYLYGVKAL*RAFWSCFLIWK
Trigger: TTTCCAGATGAGGAAGCAGGACCAGAAAGCTCTTCATAAAGCTTTAACACCATACAAGTATCCAGCAGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 72 bp TCCCCAGAGGAAAGGTGGTTTCCTATAAAGAGCAATTaGTCACTGCTGGATACTTGTATGGTGTTAAAGCTT +
Preference number: 3 (lower is better)
Translates to: SPEERWFPIKSN*SLLDTCMVLKL
Trigger: AAGCTTTAACACCATACAAGTATCCAGCAGTGATCAATTGCTCTTTATAGGAAACCACCTTTCCTCTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGTAATTTCAATAGCATaGTGTGCCCCTGGAAATAAT +
Preference number: 3 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIVISIA*CAPGNN
Trigger: ATTATTTCCAGGGGCACACAATGCTATTGAAATTAC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGTAATTTCAATAGCATaGTGTGCCCCTGGAAATAAT +
Preference number: 3 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLVISIA*CAPGNN
Trigger: ATTATTTCCAGGGGCACACAATGCTATTGAAATTAC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 72 bp AATGTTCCAGCTCTAATTGTGCTGGACTGCATCTCCTaGAATCTTCTAAAAACCAACCACCTAGATTCACAA +
Preference number: 3 (lower is better)
Translates to: NVPALIVLDCIS*NLLKTNHLDSQ
Trigger: TTGTGAATCTAGGTGGTTGGTTTTTAGAAGATTTCAGGAGATGCAGTCCAGCACAATTAGAGCTGGAACATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 72 bp AAACATTGTACAACCACAGATATTTGTGAACAGTCTTaGGAGCTGTATTTTGGTACATTAAGGCAGCTTCAG +
Preference number: 3 (lower is better)
Translates to: KHCTTTDICEQS*ELYFGTLRQLQ
Trigger: CTGAAGCTGCCTTAATGTACCAAAATACAGCTCTCAAGACTGTTCACAAATATCTGTGGTTGTACAATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR TCA 72 bp AACAAGGGCTTTCAAACAGTTGCTCACACACATCTGTaGGGTAGGTTATTATCCACATTTTGTAAATCAAAA +
Preference number: 3 (lower is better)
Translates to: NKGFQTVAHTHL*GRLLSTFCKSK
Trigger: TTTTGATTTACAAAATGTGGATAATAACCTACCTCACAGATGTGTGTGAGCAACTGTTTGAAAGCCCTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACGCCCGTCGTGCTTCTaGTTCTCAGCCATCTTCGGC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLRPSCF*FSAIFG
Trigger: GCCGAAGATGGCTGAGAAGCAGAAGCACGACGGGCG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371244.9
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGCAGACAGAATCTGCTaGAAGAGCCGCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIADRIC*KSRLAS
Trigger: GGAAGCCAGGCGGCTCTTTCAGCAGATTCTGTCTGC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGGCATCCTTTCTGGATaGGGTTTCAGGCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIGILSG*GFRPGG
Trigger: TCCCCCAGGCCTGAAACCTCATCCAGAAAGGATGCC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGCAGACAGAATCTGCTaGAAGAGCCGCCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFADRIC*KSRLAS
Trigger: GGAAGCCAGGCGGCTCTTTCAGCAGATTCTGTCTGC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGGCATCCTTTCTGGATaGGGTTTCAGGCCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFGILSG*GFRPGG
Trigger: TCCCCCAGGCCTGAAACCTCATCCAGAAAGGATGCC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGGAACGCTGAGGTGTTaGGGAACCAGATCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIGTLRC*GTRSLL
Trigger: GAGCAGAGATCTGGTTCCTCAACACCTCAGCGTTCC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATCACCCAGGCTGGCATaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLSPRLA*SGMILA
Trigger: AGCCAAGATCATGCCACTGCATGCCAGCCTGGGTGA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACGTAGCAACCCTCCCTaGCCACCTCAGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLRSNPP*PPQKRS
Trigger: TGACCTTTTCTGAGGTGGGCAGGGAGGGTTGCTACG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCGTAGCAACCCTCCCTaGCCACCTCAGAAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIRSNPP*PPQKRS
Trigger: TGACCTTTTCTGAGGTGGGCAGGGAGGGTTGCTACG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAGCCTCCCGAGTAGCTaGGATTACAAGCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLSLPSS*DYKQPV
Trigger: GACAGGCTGCTTGTAATCCCAGCTACTCGGGAGGCT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGGAACGCTGAGGTGTTaGGGAACCAGATCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFGTLRC*GTRSLL
Trigger: GAGCAGAGATCTGGTTCCTCAACACCTCAGCGTTCC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGCAGAACAGGAACGCTaGGGTGTTGAGGAACCAGAT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLAEQER*GVEEPD
Trigger: ATCTGGTTCCTCAACACCTCAGCGTTCCTGTTCTGC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAATCCATGGTGTGACTaGCCAGGCGAGGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHINPWCD*PGEVKL
Trigger: CAGTTTCACCTCGCCTGGGCAGTCACACCATGGATT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTCACCCAGGCTGGCATaGAGTGGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSPRLA*SGMILA
Trigger: AGCCAAGATCATGCCACTGCATGCCAGCCTGGGTGA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGGTTACGTGACTTGCTaGTGCTTCAGCAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLGYVTC*CFSSQR
Trigger: CCTTTGGCTGCTGAAGCAGCAGCAAGTCACGTAACC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGCTGAAAGAGCCGCCTaGCTTCCATCTCTTCAACCC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFAERAA*LPSLQP
Trigger: GGGTTGAAGAGATGGAAGCCAGGCGGCTCTTTCAGC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAGGTGGCATCCTTTCTaGATGAGGTTTCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIRWHPF*MRFQAW
Trigger: CCAGGCCTGAAACCTCATCCAGAAAGGATGCCACCT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAGCCTCCCGAGTAGCTaGGATTACAAGCAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSLPSS*DYKQPV
Trigger: GACAGGCTGCTTGTAATCCCAGCTACTCGGGAGGCT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGCAGAACAGGAACGCTaGGGTGTTGAGGAACCAGAT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFAEQER*GVEEPD
Trigger: ATCTGGTTCCTCAACACCTCAGCGTTCCTGTTCTGC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGAGAGAGCCAGAAAGTaGATGGCTCTCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIERARK*MALCSC
Trigger: ACAACTGCAGAGAGCCATTCACTTTCTGGCTCTCTC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGAGAGAGCCAGAAAGTaGATGGCTCTCTGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLERARK*MALCSC
Trigger: ACAACTGCAGAGAGCCATTCACTTTCTGGCTCTCTC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCCCTCTATCTGCCCATaGGCAACAAAAAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFPSICP*ATKSLL
Trigger: CAGCAGGCTTTTTGTTGCTCATGGGCAGATAGAGGG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTGCTTTGGGGCTGTCTaGTATAAGAGGTGGCATCCT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHICFGAV*YKRWHP
Trigger: AGGATGCCACCTCTTATAGCAGACAGCCCCAAAGCA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAATCCATGGTGTGACTaGCCAGGCGAGGTGAAACTG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFNPWCD*PGEVKL
Trigger: CAGTTTCACCTCGCCTGGGCAGTCACACCATGGATT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACGTGACTTGCTGCTaGTTCAGCAGCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIYVTCC*FSSQRK
Trigger: CTTCCTTTGGCTGCTGAAGCAGCAGCAAGTCACGTA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGGTTACGTGACTTGCTaGTGCTTCAGCAGCCAAAGG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFGYVTC*CFSSQR
Trigger: CCTTTGGCTGCTGAAGCAGCAGCAAGTCACGTAACC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACTCCAATATTCAATTTaGCGAAGGTGCCGACGCCCA +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLLQYSI*RRCRRP
Trigger: TGGGCGTCGGCACCTTCGGCAAATTGAATATTGGAG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCATGAGGTTTCAGGCCTaGGGGAATATGCATGGCACT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIMRFQA*GNMHGT
Trigger: AGTGCCATGCATATTCCCCCAGGCCTGAAACCTCAT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR CAA 72 bp AGATTTACCTACACCAAACAGCAAAGCAAGGAGGTGTaGCCAAACCACCCTTACATTGAGATGGTTCGCCAG +
Preference number: 4 (lower is better)
Translates to: RFTYTKQQSKEV*PNHPYIEMVRQ
Trigger: CTGGCGAACCATCTCAATGTAAGGGTGGTTTGGCAACACCTCCTTGCTTTGCTGTTTGGTGTAGGTAAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGCATACAATCTGCCTaGGATGACTTCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFCIQSA*DDFRCC
Trigger: GCAGCACCTGAAGTCATCTCAGGCAGATTGTATGCA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTCATACGGTTTGCTCTaGCTTCGGATTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHISYGLL*LRIPRC
Trigger: GCATCTTGGAATCCGAAGTCAGAGCAAACCGTATGA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAAACCACCCTTACATTaGGATGGTTCGCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFKPPLH*DGSPVW
Trigger: CCACACTGGCGAACCATCTCAATGTAAGGGTGGTTT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTCAACCTGCAGCATATaGATCAGGAGAGTGGCGACA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSTCSI*IRRVAT
Trigger: TGTCGCCACTCTCCTGATGCATATGCTGCAGGTTGA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAAGATGATAAGCCACTaGAAGCTGGTCTTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIKMISH*KLVLRV
Trigger: GACCCTCAAGACCAGCTTGCAGTGGCTTATCATCTT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAAGATGATAAGCCACTaGAAGCTGGTCTTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLKMISH*KLVLRV
Trigger: GACCCTCAAGACCAGCTTGCAGTGGCTTATCATCTT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAGGCCTGGGGGAATATaGATGGCACTATCATCCATA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIRPGGI*MALSSI
Trigger: TATGGATGATAGTGCCATGCATATTCCCCCAGGCCT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAGGCCTGGGGGAATATaGATGGCACTATCATCCATA +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLRPGGI*MALSSI
Trigger: TATGGATGATAGTGCCATGCATATTCCCCCAGGCCT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAGAGCTTTCTGGTCCTaGTTCCTCATCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLRAFWS*FLIWKW
Trigger: CCATTTCCAGATGAGGAAGCAGGACCAGAAAGCTCT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACTGCAAACTGGCATTaGTATGCAAGGCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTANWH*YARLAV
Trigger: TACTGCCAGCCTTGCATAGCAATGCCAGTTTGCAGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTACGTGACTTGCTGCTaGTTCAGCAGCCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFYVTCC*FSSQRK
Trigger: CTTCCTTTGGCTGCTGAAGCAGCAGCAAGTCACGTA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGGGCTTTCAAACAGTTaGTCACACACATCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLGLSNS*SHTSVR
Trigger: CCTCACAGATGTGTGTGAGCAACTGTTTGAAAGCCC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCATGAGGTTTCAGGCCTaGGGGAATATGCATGGCACT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFMRFQA*GNMHGT
Trigger: AGTGCCATGCATATTCCCCCAGGCCTGAAACCTCAT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGTCTGCTATAAGAGGTaGCATCCTTTCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLVCYKR*HPFWMR
Trigger: CCTCATCCAGAAAGGATGCCACCTCTTATAGCAGAC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGAGCCAGAAAGTGAATaGCTCTCTGCAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIEPESE*LSAVVE
Trigger: TTCCACAACTGCAGAGAGCCATTCACTTTCTGGCTC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCACCCTTACATTGAGATaGTTCGCCAGTGTGGTGTGT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHITLTLR*FASVVC
Trigger: ACACACCACACTGGCGAACCATCTCAATGTAAGGGT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCACAAAGTGGTGTCTGTaGCAGGCATGTTCCAGGTTT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHITKWCL*QACSRF
Trigger: AAACCTGGAACATGCCTGCCACAGACACCACTTTGT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCAGGCTGGCATGCAGTaGCATGATCTTGGCTTATTG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFQAGMQ*HDLGLL
Trigger: CAATAAGCCAAGATCATGCCACTGCATGCCAGCCTG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACAATCTGCCTGAGATaGCTTCAGGTGCTGCATAAT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTICLR*LQVLHN
Trigger: ATTATGCAGCACCTGAAGTCATCTCAGGCAGATTGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACTGCAAGCTGGTCTTaGGGGTCACCACTATATAAA +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTASWS*GSPLYK
Trigger: TTTATATAGTGGTGACCCTCAAGACCAGCTTGCAGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTCATACGGTTTGCTCTaGCTTCGGATTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSYGLL*LRIPRC
Trigger: GCATCTTGGAATCCGAAGTCAGAGCAAACCGTATGA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCTTCTAGACCCAGCCTaGTTCTTATCAGGCTATGGA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFLLDPA*FLSGYG
Trigger: TCCATAGCCTGATAAGAATCAGGCTGGGTCTAGAAG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGATGACTTCAGGTGCTaGATAATTTGGAGATCCGCA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIDDFRC*IIWRSA
Trigger: TGCGGATCTCCAAATTATGCAGCACCTGAAGTCATC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCATCAAATGGGAGGGTaGCACAAAGAAGAGCATACA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIHQMGG*HKEEHT
Trigger: TGTATGCTCTTCTTTGTGGCACCCTCCCATTTGATG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCATCCAATGGACATCTTaGTTTGGGGCTGTCTGCTAT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIIQWTS*FGAVCY
Trigger: ATAGCAGACAGCCCCAAAGCAAGATGTCCATTGGAT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAAAGCAAGGAGGTGTTaGCAAACCACCCTTACATTG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIKARRC*QTTLTL
Trigger: CAATGTAAGGGTGGTTTGGCAACACCTCCTTGCTTT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAGAGCTTTCTGGTCCTaGTTCCTCATCTGGAAATGG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFRAFWS*FLIWKW
Trigger: CCATTTCCAGATGAGGAAGCAGGACCAGAAAGCTCT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAATGATCTTGGCTTATTaGAATCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLMILAY*NLCLPG
Trigger: ACCTGGGAGGCAGAGATTGCAATAAGCCAAGATCAT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCACTGCAAACTGGCATTaGTATGCAAGGCTGGCAGTA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFTANWH*YARLAV
Trigger: TACTGCCAGCCTTGCATAGCAATGCCAGTTTGCAGT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGGGCTTTCAAACAGTTaGTCACACACATCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFGLSNS*SHTSVR
Trigger: CCTCACAGATGTGTGTGAGCAACTGTTTGAAAGCCC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAGTTGCTCGTTTCAGTaGGTCAACCTGCAGCATATG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSCSFQ*VNLQHM
Trigger: CATATGCTGCAGGTTGACCCACTGAAACGAGCAACT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACGAGGTAGAACTCACTaGCTTGGTTCATTATTCTCC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLRGRTH*LGSLFS
Trigger: GGAGAATAATGAACCAAGCCAGTGAGTTCTACCTCG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGTCTGCTATAAGAGGTaGCATCCTTTCTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFVCYKR*HPFWMR
Trigger: CCTCATCCAGAAAGGATGCCACCTCTTATAGCAGAC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAATTCAGTGCATCCAATaGACATCTTGCTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLIQCIQ*TSCFGA
Trigger: AGCCCCAAAGCAAGATGTCCATTGGATGCACTGAAT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGAGCCAGAAAGTGAATaGCTCTCTGCAGTTGTGGAA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFEPESE*LSAVVE
Trigger: TTCCACAACTGCAGAGAGCCATTCACTTTCTGGCTC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACTCCCGTGTCTTCACTaGAGGAAATTATTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLLPCLH*RKLFLA
Trigger: GGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCACTGCAAGCTGGTCTTaGGGGTCACCACTATATAAA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFTASWS*GSPLYK
Trigger: TTTATATAGTGGTGACCCTCAAGACCAGCTTGCAGT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCTGGACTGCATCTCCTaGAATCTTCTAAAAACCAAC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHILDCIS*NLLKTN
Trigger: GTTGGTTTTTAGAAGATTTCAGGAGATGCAGTCCAG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTTTGGGGCTAACAACTaGTTCTTTCCCTCTATCTGC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFFGANN*FFPSIC
Trigger: GCAGATAGAGGGAAAGAATCAGTTGTTAGCCCCAAA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAAAACCAAGGTGTCATaGAACAAGTTGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIKTKVS*NKLQTQ
Trigger: CTGTGTCTGCAACTTGTTTCATGACACCTTGGTTTT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCCTGCATATTCTATTTaGGAAGGTAGCTGTTCCTAC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIPAYSI*EGSCSY
Trigger: GTAGGAACAGCTACCTTCTCAAATAGAATATGCAGG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCAGATGCAAACAACATaGTCATTTGTAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIQMQTT*SFVGGR
Trigger: TCTGCCTCCTACAAATGATCATGTTGTTTGCATCTG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGATGACTTCAGGTGCTaGATAATTTGGAGATCCGCA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFDDFRC*IIWRSA
Trigger: TGCGGATCTCCAAATTATGCAGCACCTGAAGTCATC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCTTAGTCGTATTCAGTaGATCCAATGGACATCTTGC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHILSRIQ*IQWTSC
Trigger: GCAAGATGTCCATTGGATGCACTGAATACGACTAAG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACTTAGTCGTATTCAGTaGATCCAATGGACATCTTGC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLLSRIQ*IQWTSC
Trigger: GCAAGATGTCCATTGGATGCACTGAATACGACTAAG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAAACTGAAGACAATGTaGTTCCGGTCAAAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFKLKTM*FRSKSQ
Trigger: CTGGCTCTTTGACCGGAAGCACATTGTCTTCAGTTT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCATTAGCATTATGAGCTaGACCAGGACCCTAACACCT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFISIMS*TRTLTP
Trigger: AGGTGTTAGGGTCCTGGTGCAGCTCATAATGCTAAT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGTTCAAAGCTTCCCTaGCCTATCAGGTTCAACAGT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFCSKLP*PIRFNS
Trigger: ACTGTTGAACCTGATAGGGCAGGGAAGCTTTGAACA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGAGCAACAAAAAGCCTaGTGTAACAATGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLEQQKA*CNNVPA
Trigger: AGCTGGAACATTGTTACAGCAGGCTTTTTGTTGCTC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGCCTACTTCCCTCCCTaGATATTCTATTTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFAYFPP*IFYLRR
Trigger: CCTTCTCAAATAGAATATGCAGGGAGGGAAGTAGGC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGTGACCTGTTCTTTGTaGTATTACTGTTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIVTCSL*YYCSVA
Trigger: TGCCACTGAACAGTAATAGCACAAAGAACAGGTCAC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAAACTGGCATTGCTATaGAAGGCTGGCAGTAAACAT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLKLALL*KAGSKH
Trigger: ATGTTTACTGCCAGCCTTGCATAGCAATGCCAGTTT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACATCATAGTCACAACTaGAAACTGGCATTGCTATGC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLHHSHN*KLALLC
Trigger: GCATAGCAATGCCAGTTTGCAGTTGTGACTATGATG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAGGTGCTGCATAATTTaGAGATCCGCAACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIRCCII*RSATSS
Trigger: AGAACTAGTTGCGGATCTCCAAATTATGCAGCACCT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCATTCAGTGCATCCAATaGACATCTTGCTTTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFIQCIQ*TSCFGA
Trigger: AGCCCCAAAGCAAGATGTCCATTGGATGCACTGAAT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGGCTCTCTGCAGTTGTaGAATCAAAACTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIGSLQL*NQNLIL
Trigger: CAAGATCAAGTTTTGATTCCACAACTGCAGAGAGCC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTGGCGACAGAACGATTaGGATATTCTGGGATATAAA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIWRQND*DILGYK
Trigger: TTTATATCCCAGAATATCTCAATCGTTCTGTCGCCA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCATCTGCAAAGCCATATaGTGTGACACAACGCAAACT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFICKAI*CDTTQT
Trigger: AGTTTGCGTTGTGTCACATCATATGGCTTTGCAGAT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCTGGACTGCATCTCCTaGAATCTTCTAAAAACCAAC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFLDCIS*NLLKTN
Trigger: GTTGGTTTTTAGAAGATTTCAGGAGATGCAGTCCAG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCAGAGTTTACAACACTaGAATGTGGAAATTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFQSLQH*NVEIWG
Trigger: GCCCCAAATTTCCACATTTCAGTGTTGTAAACTCTG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAGCATTCACTCACGATaGACATGTCTGCAAGTTAAA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHISIHSR*TCLQVK
Trigger: TTTAACTTGCAGACATGTTCATCGTGAGTGAATGCT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAAAACCAAGGTGTCATaGAACAAGTTGCAGACACAG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFKTKVS*NKLQTQ
Trigger: CTGTGTCTGCAACTTGTTTCATGACACCTTGGTTTT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTCAAGTATATACCTCTaGCATGCCTCACCAAATCAA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHISSIYL*HASPNQ
Trigger: TTGATTTGGTGAGGCATGTCAGAGGTATATACTTGA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCCTATAAAGAGCAATTaGTCACTGCTGGATACTTGT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIPIKSN*SLLDTC
Trigger: ACAAGTATCCAGCAGTGATCAATTGCTCTTTATAGG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAACCACAGATATTTGTaGACAGTCTTGAGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLNHRYL*TVLRAV
Trigger: TACAGCTCTCAAGACTGTTCACAAATATCTGTGGTT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATGTCTTTGATAGTTaGTCGTTTCAGTGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIYVFDS*SFQWVN
Trigger: GTTGACCCACTGAAACGAGCAACTATCAAAGACATA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACACGAAGATGGTATaGATTCACTACCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIYTKMV*IHYLPF
Trigger: GAATGGAAGGTAGTGAATGCATACCATCTTCGTGTA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCATGATTTTTGCCATTTaGATTCCTCCAGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIMIFAI*IPPAAV
Trigger: TACAGCTGCTGGAGGAATGCAAATGGCAAAAATCAT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTGGAAATGGCAAAAATaGTTTCTCTGGTTACCTCTC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIWKWQK*FLWLPL
Trigger: GAGAGGTAACCAGAGAAAGCATTTTTGCCATTTCCA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGTGACCTGTTCTTTGTaGTATTACTGTTCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFVTCSL*YYCSVA
Trigger: TGCCACTGAACAGTAATAGCACAAAGAACAGGTCAC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAAACTGGCATTGCTATaGAAGGCTGGCAGTAAACAT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFKLALL*KAGSKH
Trigger: ATGTTTACTGCCAGCCTTGCATAGCAATGCCAGTTT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCATCATAGTCACAACTaGAAACTGGCATTGCTATGC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFHHSHN*KLALLC
Trigger: GCATAGCAATGCCAGTTTGCAGTTGTGACTATGATG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAGGTGCTGCATAATTTaGAGATCCGCAACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFRCCII*RSATSS
Trigger: AGAACTAGTTGCGGATCTCCAAATTATGCAGCACCT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACGATTGAGATATTCTaGGATATAAAAGACACCCCC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTIEIF*DIKDTP
Trigger: GGGGGTGTCTTTTATATCCCAGAATATCTCAATCGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCACGATTGAGATATTCTaGGATATAAAAGACACCCCC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHITIEIF*DIKDTP
Trigger: GGGGGTGTCTTTTATATCCCAGAATATCTCAATCGT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCTTCTTACACGAAGATaGTATGCATTCACTACCTTC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHILLTRR*YAFTTF
Trigger: GAAGGTAGTGAATGCATACCATCTTCGTGTAAGAAG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGGCTCTCTGCAGTTGTaGAATCAAAACTTGATCTTG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFGSLQL*NQNLIL
Trigger: CAAGATCAAGTTTTGATTCCACAACTGCAGAGAGCC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTTCCCAAAAGAGGTATaGACCCATTTAGAGAACCCA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFFPKEV*THLENP
Trigger: TGGGTTCTCTAAATGGGTCCATACCTCTTTTGGGAA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCCGTGTTTGGTTTTCTaGATGATTTTTGCCATTTGC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIPCLVF*MIFAIC
Trigger: GCAAATGGCAAAAATCATCCAGAAAACCAAACACGG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATTATGGCCTGTTAATTaGTGTTCTCCAATCTTCACT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLLWPVN*CSPIFT
Trigger: AGTGAAGATTGGAGAACATCAATTAACAGGCCATAA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371244.9
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGGCGACAGAACGATTaGGATATTCTGGGATATAAA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFWRQND*DILGYK
Trigger: TTTATATCCCAGAATATCTCAATCGTTCTGTCGCCA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAGCATTCACTCACGATaGACATGTCTGCAAGTTAAA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSIHSR*TCLQVK
Trigger: TTTAACTTGCAGACATGTTCATCGTGAGTGAATGCT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTCAAGTATATACCTCTaGCATGCCTCACCAAATCAA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSSIYL*HASPNQ
Trigger: TTGATTTGGTGAGGCATGTCAGAGGTATATACTTGA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTGTCACTCTAAGACTTaGAAGCAATACATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHICHSKT*KQYICV
Trigger: AACACAGATGTATTGCTTTCAAGTCTTAGAGTGACA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACACTTCAAACGTAATTaGAATTTACCTACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLHFKRN*NLPTLL
Trigger: AAGCAGGGTAGGTAAATTTCAATTACGTTTGAAGTG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACTGTATGCACTGTATaGACCTTGTCAAAATTCTAC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTVCTV*TLSKFY
Trigger: GTAGAATTTTGACAAGGTTCATACAGTGCATACAGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCACTGTATGCACTGTATaGACCTTGTCAAAATTCTAC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHITVCTV*TLSKFY
Trigger: GTAGAATTTTGACAAGGTTCATACAGTGCATACAGT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGCCAAAGGAAGAAACTaGTTCCAAGTTAGATTTTGT +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLAKGRN*FQVRFC
Trigger: ACAAAATCTAACTTGGAATCAGTTTCTTCCTTTGGC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGCCAAAGGAAGAAACTaGTTCCAAGTTAGATTTTGT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIAKGRN*FQVRFC
Trigger: ACAAAATCTAACTTGGAATCAGTTTCTTCCTTTGGC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCATTTGTGAACAGTCTTaGGAGCTGTATTTTGGTACA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIICEQS*ELYFGT
Trigger: TGTACCAAAATACAGCTCTCAAGACTGTTCACAAAT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAACCACAGATATTTGTaGACAGTCTTGAGAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFNHRYL*TVLRAV
Trigger: TACAGCTCTCAAGACTGTTCACAAATATCTGTGGTT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGAATCGGAGTTTATTTaGACAGAAAAGCACTGGAAG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFESEFI*TEKHWK
Trigger: CTTCCAGTGCTTTTCTGTTCAAATAAACTCCGATTC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATGTGTTTGTTACCTATaGGTTTCATATGGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLCVCYL*VSYGAN
Trigger: GTTTGCACCATATGAAACTCATAGGTAACAAACACA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTATGTCTTTGATAGTTaGTCGTTTCAGTGGGTCAAC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFYVFDS*SFQWVN
Trigger: GTTGACCCACTGAAACGAGCAACTATCAAAGACATA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTACACGAAGATGGTATaGATTCACTACCTTCCATTC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFYTKMV*IHYLPF
Trigger: GAATGGAAGGTAGTGAATGCATACCATCTTCGTGTA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAAAATTACCTTTTGGTaGCACAAGATGGCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIKITFW*HKMAVF
Trigger: AAAGACTGCCATCTTGTGGCACCAAAAGGTAATTTT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATATACCTCTGACATaGCTCACCAAATCAAAACAG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIYIPLT*LTKSKQ
Trigger: CTGTTTTGATTTGGTGAGGCATGTCAGAGGTATATA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCATGATTTTTGCCATTTaGATTCCTCCAGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFMIFAI*IPPAAV
Trigger: TACAGCTGCTGGAGGAATGCAAATGGCAAAAATCAT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAGAGCAATTGATCACTaGTGGATACTTGTATGGTGT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFRAIDH*WILVWC
Trigger: ACACCATACAAGTATCCAGCAGTGATCAATTGCTCT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGAAATTTACCTACCCTaGTTGTCCAAACAATCAAGA +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLEIYLP*LSKQSR
Trigger: TCTTGATTGTTTGGACAAGCAGGGTAGGTAAATTTC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCACTCAATCAGGCAGATaGAAACAACATGATCATTTG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHITQSGR*KQHDHL
Trigger: CAAATGATCATGTTGTTTGCATCTGCCTGATTGAGT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACTCAATCAGGCAGATaGAAACAACATGATCATTTG +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTQSGR*KQHDHL
Trigger: CAAATGATCATGTTGTTTGCATCTGCCTGATTGAGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCTTCTTACACGAAGATaGTATGCATTCACTACCTTC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFLLTRR*YAFTTF
Trigger: GAAGGTAGTGAATGCATACCATCTTCGTGTAAGAAG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGTAAAAATTACCTTTTaGTGCCACAAGATGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFVKITF*CHKMAV
Trigger: GACTGCCATCTTGTGGCACCAAAAGGTAATTTTTAC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATACAACACTGAAATGTaGAAATTTGGGGCTAACAAC +
Preference number: 4 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLYNTEM*KFGANN
Trigger: GTTGTTAGCCCCAAATTTCCACATTTCAGTGTTGTA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCCCATTTGCAGAAAATaGAGAATTGTTCATGCTACA +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIPICRK*RIVHAT
Trigger: TGTAGCATGAACAATTCTCCATTTTCTGCAAATGGG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTTCCTCATCTGGAAATaGCAAAAATGCTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFFLIWK*QKCFLW
Trigger: CCAGAGAAAGCATTTTTGCCATTTCCAGATGAGGAA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAAAGAACCCAAACTGTaGCCATTAGTTCTCCTAAAA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFKEPKL*PLVLLK
Trigger: TTTTAGGAGAACTAATGGTCACAGTTTGGGTTCTTT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGTCACTCTAAGACTTaGAAGCAATACATCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFCHSKT*KQYICV
Trigger: AACACAGATGTATTGCTTTCAAGTCTTAGAGTGACA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCACTTCAAACGTAATTaGAATTTACCTACCCTGCTT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFHFKRN*NLPTLL
Trigger: AAGCAGGGTAGGTAAATTTCAATTACGTTTGAAGTG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCATTTGTGAACAGTCTTaGGAGCTGTATTTTGGTACA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFICEQS*ELYFGT
Trigger: TGTACCAAAATACAGCTCTCAAGACTGTTCACAAAT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR TCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGTGTTTGTTACCTATaGGTTTCATATGGTGCAAAC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFCVCYL*VSYGAN
Trigger: GTTTGCACCATATGAAACTCATAGGTAACAAACACA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCATATACTTTGGGAAATaGAGTTCTAGAACTACATGG +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIIYFGK*SSRTTW
Trigger: CCATGTAGTTCTAGAACTGCATTTCCCAAAGTATAT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGAAATTTACCTACCCTaGTTGTCCAAACAATCAAGA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFEIYLP*LSKQSR
Trigger: TCTTGATTGTTTGGACAAGCAGGGTAGGTAAATTTC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTACAACACTGAAATGTaGAAATTTGGGGCTAACAAC +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFYNTEM*KFGANN
Trigger: GTTGTTAGCCCCAAATTTCCACATTTCAGTGTTGTA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCAAAAATGCTTTCTCTaGTTACCTCTCAAAGTTATC +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIQKCFL*LPLKVI
Trigger: GATAACTTTGAGAGGTAACCAGAGAAAGCATTTTTG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGCTATTACTGTTCAGTaGCATCAAATGCATCATAAT +
Preference number: 4 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIAITVQ*HQMHHN
Trigger: ATTATGATGCATTTGATGCCACTGAACAGTAATAGC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR CAA 72 bp TGCTTCATGCCAAATGGATGTGATGTTTCACCGTGTTaGGTTTTCTGGATGATTTTTGCCATTTGCATTCCT +
Preference number: 4 (lower is better)
Translates to: CFMPNGCDVSPC*VFWMIFAICIP
Trigger: AGGAATGCAAATGGCAAAAATCATCCAGAAAACCAAACACGGTGAAACATCACATCCATTTGGCATGAAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTCTAACATTCTCATTTaGTTCTTGGCAGAACATACA +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSNILI*FLAEHT
Trigger: TGTATGTTCTGCCAAGAAGCAAATGAGAATGTTAGA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR GCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCATATACTTTGGGAAATaGAGTTCTAGAACTACATGG +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFIYFGK*SSRTTW
Trigger: CCATGTAGTTCTAGAACTGCATTTCCCAAAGTATAT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CCA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGCTATTACTGTTCAGTaGCATCAAATGCATCATAAT +
Preference number: 4 (lower is better)
Translates to: LKLSQIATRPPSQIGELFAITVQ*HQMHHN
Trigger: ATTATGATGCATTTGATGCCACTGAACAGTAATAGC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR CAA 72 bp ATTGTGGTTACCTGTTACATGACCACAGTCCTTCTGTaGAATACACTAGGCAGTATTTGTACAAATACTGTT +
Preference number: 4 (lower is better)
Translates to: IVVTCYMTTVLL*NTLGSICTNTV
Trigger: AACAGTATTTGTACAAATACTGCCTAGTGTATTCAACAGAAGGACTGTGGTCATGTAACAGGTAACCACAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
3UTR CAA 72 bp AAGCTTATAAGCAATCAGACAGGCTGCTTTTCTCCTTaGTGTTTGTTACCTATGAGTTTCATATGGTGCAAA +
Preference number: 4 (lower is better)
Translates to: KLISNQTGCFSP*CLLPMSFIWCK
Trigger: TTTGCACCATATGAAACTCATAGGTAACAAACACAAAGGAGAAAAGCAGCCTGTCTGATTGCTTATAAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS TCA 90 bp CTTGCTTTGGGGCTGTCTGCTATAAGAGGTGGCATCCTTTCTGGATaGGGTTTCAGGCCTGGGGGAATATGCATGGCACTATCATCCATA +
Preference number: 5 (lower is better)
Translates to: LALGLSAIRGGILSG*GFRPGGICMALSSI
Trigger: TATGGATGATAGTGCCATGCATATTCCCCCAGGCCTGAAACCTCATCCAGAAAGGATGCCACCTCTTATAGCAGACAGCCCCAAAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS GCA 90 bp AGTCGTATTCAGTGCATCCAATGGACATCTTGCTTTGGGGCTGTCTaGTATAAGAGGTGGCATCCTTTCTGGATGAGGTTTCAGGCCTGG +
Preference number: 5 (lower is better)
Translates to: SRIQCIQWTSCFGAV*YKRWHPFWMRFQAW
Trigger: CCAGGCCTGAAACCTCATCCAGAAAGGATGCCACCTCTTATAGCAGACAGCCCCAAAGCAAGATGTCCATTGGATGCACTGAATACGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CCA 90 bp TGCATCCAATGGACATCTTGCTTTGGGGCTGTCTGCTATAAGAGGTaGCATCCTTTCTGGATGAGGTTTCAGGCCTGGGGGAATATGCAT +
Preference number: 5 (lower is better)
Translates to: CIQWTSCFGAVCYKR*HPFWMRFQAWGNMH
Trigger: ATGCATATTCCCCCAGGCCTGAAACCTCATCCAGAAAGGATGCCACCTCTTATAGCAGACAGCCCCAAAGCAAGATGTCCATTGGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS TCA 90 bp AAACTTGATCTTGGTCTGTGTAAGCCAGCAGCAGAACAGGAACGCTaGGGTGTTGAGGAACCAGATCTCTGCTCCACTACTTCATCATCA +
Preference number: 5 (lower is better)
Translates to: KLDLGLCKPAAEQER*GVEEPDLCSTTSSS
Trigger: TGATGATGAAGTAGTGGAGCAGAGATCTGGTTCCTCAACACCTCAGCGTTCCTGTTCTGCTGCTGGCTTACACAGACCAAGATCAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CCA 90 bp GCCTGGGGGAATATGCATGGCACTATCATCCATAAAAGAACCAGATaGAGGACTAGAGGCGAGGTAGAACTCACTGGCTTGGTTCATTAT +
Preference number: 5 (lower is better)
Translates to: AWGNMHGTIIHKRTR*RTRGEVELTGLVHY
Trigger: ATAATGAACCAAGCCAGTGAGTTCTACCTCGCCTCTAGTCCTCCATCTGGTTCTTTTATGGATGATAGTGCCATGCATATTCCCCCAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAGGAACGCTGAGGTGTaGAGGAACCAGATCTCTGCT +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLRNAEV*RNQISA
Trigger: AGCAGAGATCTGGTTCCTCAACACCTCAGCGTTCCT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAATGAGGTTACGTGACTaGCTGCTGCTTCAGCAGCCA +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLMRLRD*LLLQQP
Trigger: TGGCTGCTGAAGCAGCAGCAAGTCACGTAACCTCAT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATCTCCAATATTCAATTaGCCGAAGGTGCCGACGCCC +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLSPIFN*PKVPTP
Trigger: GGGCGTCGGCACCTTCGGCAAATTGAATATTGGAGA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000610361.1
CDS CCA 90 bp AAACCATTCATGCTCTCTTATGTCTTTGATAGTTGCTCGTTTCAGTaGGTCAACCTGCAGCATATGCATCAGGAGAGTGGCGACAGAACG +
Preference number: 5 (lower is better)
Translates to: KPFMLSYVFDSCSFQ*VNLQHMHQESGDRT
Trigger: CGTTCTGTCGCCACTCTCCTGATGCATATGCTGCAGGTTGACCCACTGAAACGAGCAACTATCAAAGACATAAGAGAGCATGAATGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACATCCAATGGACATCTaGCTTTGGGGCTGTCTGCTA +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLHPMDI*LWGCLL
Trigger: TAGCAGACAGCCCCAAAGCAAGATGTCCATTGGATG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAGGAACGCTGAGGTGTaGAGGAACCAGATCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFRNAEV*RNQISA
Trigger: AGCAGAGATCTGGTTCCTCAACACCTCAGCGTTCCT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCAAACCACCCTTACATaGAGATGGTTCGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIQTTLT*RWFASV
Trigger: CACACTGGCGAACCATCTCAATGTAAGGGTGGTTTG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAACTGCAAACTGGCATaGCTATGCAAGGCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLNCKLA*LCKAGS
Trigger: ACTGCCAGCCTTGCATAGCAATGCCAGTTTGCAGTT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAACTGCAAACTGGCATaGCTATGCAAGGCTGGCAGT +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHINCKLA*LCKAGS
Trigger: ACTGCCAGCCTTGCATAGCAATGCCAGTTTGCAGTT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS GCA 90 bp TGCTCTCTTATGTCTTTGATAGTTGCTCGTTTCAGTGGGTCAACCTaGAGCATATGCATCAGGAGAGTGGCGACAGAACGATTGAGATAT +
Preference number: 5 (lower is better)
Translates to: CSLMSLIVARFSGST*SICIRRVATERLRY
Trigger: ATATCTCAATCGTTCTGTCGCCACTCTCCTGATGCATATGCTGCAGGTTGACCCACTGAAACGAGCAACTATCAAAGACATAAGAGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCATCCAATGGACATCTaGCTTTGGGGCTGTCTGCTA +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFHPMDI*LWGCLL
Trigger: TAGCAGACAGCCCCAAAGCAAGATGTCCATTGGATG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACAAAGCAAGGAGGTGTaGCCAAACCACCCTTACATT +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLQSKEV*PNHPYI
Trigger: AATGTAAGGGTGGTTTGGCAACACCTCCTTGCTTTG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTTAAACTATCTCAAATaGCAACCCGCCCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHILNYLK*QPALLP
Trigger: GGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATTAAACTATCTCAAATaGCAACCCGCCCTCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLLNYLK*QPALLP
Trigger: GGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACAACTTGTAAATGGTTaGCCTACTTCCCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLQLVNG*PTSLPA
Trigger: TGCAGGGAGGGAAGTAGGCAAACCATTTACAAGTTG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATGCAGTGGCATGATCTaGGCTTATTGCAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLCSGMI*AYCNLC
Trigger: GCAGAGATTGCAATAAGCCAAGATCATGCCACTGCA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAGGGCTTTCAAACAGTaGCTCACACACATCTGTGAG +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIRAFKQ*LTHICE
Trigger: CTCACAGATGTGTGTGAGCAACTGTTTGAAAGCCCT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAGGGCTTTCAAACAGTaGCTCACACACATCTGTGAG +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLRAFKQ*LTHICE
Trigger: CTCACAGATGTGTGTGAGCAACTGTTTGAAAGCCCT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAATGGACATCTTGCTTaGGGGCTGTCTGCTATAAGA +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLNGHLA*GLSAIR
Trigger: TCTTATAGCAGACAGCCCCAAAGCAAGATGTCCATT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAATGGACATCTTGCTTaGGGGCTGTCTGCTATAAGA +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHINGHLA*GLSAIR
Trigger: TCTTATAGCAGACAGCCCCAAAGCAAGATGTCCATT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCCAACTTGTAAATGGTTaGCCTACTTCCCTCCCTGCA +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFQLVNG*PTSLPA
Trigger: TGCAGGGAGGGAAGTAGGCAAACCATTTACAAGTTG...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGCAGTGGCATGATCTaGGCTTATTGCAATCTCTGC +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFCSGMI*AYCNLC
Trigger: GCAGAGATTGCAATAAGCCAAGATCATGCCACTGCA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGTAGAACTCACTGGCTaGGTTCATTATTCTCCGATT +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLVELTG*VHYSPI
Trigger: AATCGGAGAATAATGAACCAAGCCAGTGAGTTCTAC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCAATCAAAACTTGATCTaGGTCTGTGTAAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHINQNLI*VCVSQQ
Trigger: CTGCTGGCTTACACAGACCAAGATCAAGTTTTGATT...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAATCAAAACTTGATCTaGGTCTGTGTAAGCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLNQNLI*VCVSQQ
Trigger: CTGCTGGCTTACACAGACCAAGATCAAGTTTTGATT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAAATGGCTCTCTGCAGTaGTGGAATCAAAACTTGATC +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLNGSLQ*WNQNLI
Trigger: GATCAAGTTTTGATTCCACAACTGCAGAGAGCCATT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGATGATTTTTGCCATTaGCATTCCTCCAGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFDDFCH*HSSSSC
Trigger: ACAGCTGCTGGAGGAATGCAAATGGCAAAAATCATC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTGTGTGACCTGTTCTTaGTGCTATTACTGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHICVTCS*CYYCSV
Trigger: CACTGAACAGTAATAGCACAAAGAACAGGTCACACA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGGCTGCTTTTCTCCTTaGTGTTTGTTACCTATGAGT +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLGCFSP*CLLPMS
Trigger: ACTCATAGGTAACAAACACAAAGGAGAAAAGCAGCC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTATGCTCTCTTATGTCTTaGATAGTTGCTCGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLCSLMS*IVARFS
Trigger: ACTGAAACGAGCAACTATCAAAGACATAAGAGAGCA...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAGTAACTGGGCAAATCTaGTTTAAACCATTCATGCTC +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLVTGQI*FKPFML
Trigger: GAGCATGAATGGTTTAAACAAGATTTGCCCAGTTAC...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGTAGAACTCACTGGCTaGGTTCATTATTCTCCGATT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFVELTG*VHYSPI
Trigger: AATCGGAGAATAATGAACCAAGCCAGTGAGTTCTAC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTTCACAGCTAAAGATTaGGGCTTAGTCGTATTCAGT +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIFTAKD*GLVVFS
Trigger: ACTGAATACGACTAAGCCCAAATCTTTAGCTGTGAA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTTGTGGAATCAAAACTaGATCTTGGTCTGTGTAAGC +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHILWNQN*ILVCVS
Trigger: GCTTACACAGACCAAGATCAAGTTTTGATTCCACAA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCAATGGCTCTCTGCAGTaGTGGAATCAAAACTTGATC +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFNGSLQ*WNQNLI
Trigger: GATCAAGTTTTGATTCCACAACTGCAGAGAGCCATT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCACCACAGTCCTTCTGTaGAATACACTAGGCAGTATT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFTTVLL*NTLGSI
Trigger: AATACTGCCTAGTGTATTCAACAGAAGGACTGTGGT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGAACATACATTACTTTaGGCAAAGAGAAGCCTGTCA +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIEHTLL*AKRSLS
Trigger: TGACAGGCTTCTCTTTGCCAAAAGTAATGTATGTTC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTGTAAAAATTACCTTTaGGTGCCACAAGATGGCAGT +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHICKNYL*VPQDGS
Trigger: ACTGCCATCTTGTGGCACCAAAAGGTAATTTTTACA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCCTCACAGGATATACTTaGGGAAATGCAGTTCTAGAA +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHILTGYT*GNAVLE
Trigger: TTCTAGAACTGCATTTCCCAAAGTATATCCTGTGAG...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACTCACAGGATATACTTaGGGAAATGCAGTTCTAGAA +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLLTGYT*GNAVLE
Trigger: TTCTAGAACTGCATTTCCCAAAGTATATCCTGTGAG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTCCTATAAAGAGCAATaGATCACTGCTGGATACTTG +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHISYKEQ*ITAGYL
Trigger: CAAGTATCCAGCAGTGATCAATTGCTCTTTATAGGA...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACCACACCGGATAATTTaGGTATTTTTAGTAGAGACG +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLPHRII*VFLVET
Trigger: CGTCTCTACTAAAAATACCAAAATTATCCGGTGTGG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGTGTGACCTGTTCTTaGTGCTATTACTGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFCVTCS*CYYCSV
Trigger: CACTGAACAGTAATAGCACAAAGAACAGGTCACACA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGGCTGCTTTTCTCCTTaGTGTTTGTTACCTATGAGT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFGCFSP*CLLPMS
Trigger: ACTCATAGGTAACAAACACAAAGGAGAAAAGCAGCC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGCTCTCTTATGTCTTaGATAGTTGCTCGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFCSLMS*IVARFS
Trigger: ACTGAAACGAGCAACTATCAAAGACATAAGAGAGCA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTTCACAGCTAAAGATTaGGGCTTAGTCGTATTCAGT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFFTAKD*GLVVFS
Trigger: ACTGAATACGACTAAGCCCAAATCTTTAGCTGTGAA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTTGTGGAATCAAAACTaGATCTTGGTCTGTGTAAGC +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFLWNQN*ILVCVS
Trigger: GCTTACACAGACCAAGATCAAGTTTTGATTCCACAA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTGTAAAAATTACCTTTaGGTGCCACAAGATGGCAGT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFCKNYL*VPQDGS
Trigger: ACTGCCATCTTGTGGCACCAAAAGGTAATTTTTACA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp ATAGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCGATGTTTCACCGTGTTaGGTTTTCTGGATGATTTTT +
Preference number: 5 (lower is better)
Translates to: IEALLPCLHWRKLFLAHIDVSPC*VFWMIF
Trigger: AAAAATCATCCAGAAAACCAAACACGGTGAAACATC...GATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTACAAATTTGTAATGCTTaGCTTCATGCCAAATGGATG +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLQICNA*LHAKWM
Trigger: CATCCATTTGGCATGAAGCAAAGCATTACAAATTTG...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAATCACTGCTGGATACTaGTATGGTGTTAAAGCTTTA +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLITAGY*YGVKAL
Trigger: TAAAGCTTTAACACCATACAAGTATCCAGCAGTGAT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCTCCTATAAAGAGCAATaGATCACTGCTGGATACTTG +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFSYKEQ*ITAGYL
Trigger: CAAGTATCCAGCAGTGATCAATTGCTCTTTATAGGA...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp AGAAGCTCTTCTCCCGTGTCTTCACTGGAGGAAATTATTCTTAGCCCACATCTAACAATGCAATTCTCCTaGGCTAGAATGTTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: RSSSPVSSLEEIILSPHLTMQFS*ARMFLF
Trigger: GAACAAAAACATTCTAGCCAAGGAGAATTGCATTGT...TAGATGTGGGCTAAGAATAATTTCCTCCAGTGAAGACACGGGAGAAGAGCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGTAATTTCAATAGCATaGTGTGCCCCTGGAAATAAT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFVISIA*CAPGNN
Trigger: ATTATTTCCAGGGGCACACAATGCTATTGAAATTAC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCGATGTTTCACCGTGTTaGGTTTTCTGGATGATTTTT +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFDVSPC*VFWMIF
Trigger: AAAAATCATCCAGAAAACCAAACACGGTGAAACATC...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCATCACTGCTGGATACTaGTATGGTGTTAAAGCTTTA +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFITAGY*YGVKAL
Trigger: TAAAGCTTTAACACCATACAAGTATCCAGCAGTGAT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS-3UTR CAA 90 bp CTTAAACTATCTCAAATTGCAACCCGCCCTCCTTCCCAAATTGGTGAACTATTCACAATGCAATTCTCCTaGGCTAGAATGTTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: LKLSQIATRPPSQIGELFTMQFS*ARMFLF
Trigger: GAACAAAAACATTCTAGCCAAGGAGAATTGCATTGT...GAATAGTTCACCAATTTGGGAAGGAGGGCGGGTTGCAATTTGAGATAGTTTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CCA 72 bp TGGACATCTTGCTTTGGGGCTGTCTGCTATAAGAGGTaGCATCCTTTCTGGATGAGGTTTCAGGCCTGGGGG +
Preference number: 6 (lower is better)
Translates to: WTSCFGAVCYKR*HPFWMRFQAWG
Trigger: CCCCCAGGCCTGAAACCTCATCCAGAAAGGATGCCACCTCTTATAGCAGACAGCCCCAAAGCAAGATGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS TCA 72 bp CTTGGTCTGTGTAAGCCAGCAGCAGAACAGGAACGCTaGGGTGTTGAGGAACCAGATCTCTGCTCCACTACT +
Preference number: 6 (lower is better)
Translates to: LGLCKPAAEQER*GVEEPDLCSTT
Trigger: AGTAGTGGAGCAGAGATCTGGTTCCTCAACACCTCAGCGTTCCTGTTCTGCTGCTGGCTTACACAGACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CCA 72 bp TTTGGGGCTGTCTGCTATAAGAGGTGGCATCCTTTCTaGATGAGGTTTCAGGCCTGGGGGAATATGCATGGC +
Preference number: 6 (lower is better)
Translates to: FGAVCYKRWHPF*MRFQAWGNMHG
Trigger: GCCATGCATATTCCCCCAGGCCTGAAACCTCATCCAGAAAGGATGCCACCTCTTATAGCAGACAGCCCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CCA 72 bp AATCCACAGCAGACAGAATCTGCTGAAAGAGCCGCCTaGCTTCCATCTCTTCAACCCGTCCATGCTTACAGA +
Preference number: 6 (lower is better)
Translates to: NPQQTESAERAA*LPSLQPVHAYR
Trigger: TCTGTAAGCATGGACGGGTTGAAGAGATGGAAGCCAGGCGGCTCTTTCAGCAGATTCTGTCTGCTGTGGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS GCA 72 bp GGGCTTAGTCGTATTCAGTGCATCCAATGGACATCTTaGTTTGGGGCTGTCTGCTATAAGAGGTGGCATCCT +
Preference number: 6 (lower is better)
Translates to: GLSRIQCIQWTS*FGAVCYKRWHP
Trigger: AGGATGCCACCTCTTATAGCAGACAGCCCCAAAGCAAGATGTCCATTGGATGCACTGAATACGACTAAGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CAA 72 bp TGTGTAAGCCAGCAGCAGAACAGGAACGCTGAGGTGTaGAGGAACCAGATCTCTGCTCCACTACTTCATCAT +
Preference number: 6 (lower is better)
Translates to: CVSQQQNRNAEV*RNQISAPLLHH
Trigger: ATGATGAAGTAGTGGAGCAGAGATCTGGTTCCTCAACACCTCAGCGTTCCTGTTCTGCTGCTGGCTTACACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CAA 90 bp GAGAGCCAGAAAGTGAATGGCTCTCTGCAGTTGTGGAATCAAAACTaGATCTTGGTCTGTGTAAGCCAGCAGCAGAACAGGAACGCTGAG +
Preference number: 6 (lower is better)
Translates to: ESQKVNGSLQLWNQN*ILVCVSQQQNRNAE
Trigger: CTCAGCGTTCCTGTTCTGCTGCTGGCTTACACAGACCAAGATCAAGTTTTGATTCCACAACTGCAGAGAGCCATTCACTTTCTGGCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS TCA 72 bp GCAGCATATGCATCAGGAGAGTGGCGACAGAACGATTaGGATATTCTGGGATATAAAAGACACCCCCTCGGA +
Preference number: 6 (lower is better)
Translates to: AAYASGEWRQND*DILGYKRHPLG
Trigger: TCCGAGGGGGTGTCTTTTATATCCCAGAATATCTCAATCGTTCTGTCGCCACTCTCCTGATGCATATGCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS GCA 72 bp ATGTCTTTGATAGTTGCTCGTTTCAGTGGGTCAACCTaGAGCATATGCATCAGGAGAGTGGCGACAGAACGA +
Preference number: 6 (lower is better)
Translates to: MSLIVARFSGST*SICIRRVATER
Trigger: TCGTTCTGTCGCCACTCTCCTGATGCATATGCTGCAGGTTGACCCACTGAAACGAGCAACTATCAAAGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CAA 90 bp ATCTTGGTCTGTGTAAGCCAGCAGCAGAACAGGAACGCTGAGGTGTaGAGGAACCAGATCTCTGCTCCACTACTTCATCATCAATGCTTT +
Preference number: 6 (lower is better)
Translates to: ILVCVSQQQNRNAEV*RNQISAPLLHHQCF
Trigger: AAAGCATTGATGATGAAGTAGTGGAGCAGAGATCTGGTTCCTCAACACCTCAGCGTTCCTGTTCTGCTGCTGGCTTACACAGACCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CAA 90 bp CAGAAAGTGAATGGCTCTCTGCAGTTGTGGAATCAAAACTTGATCTaGGTCTGTGTAAGCCAGCAGCAGAACAGGAACGCTGAGGTGTTG +
Preference number: 6 (lower is better)
Translates to: QKVNGSLQLWNQNLI*VCVSQQQNRNAEVL
Trigger: CAACACCTCAGCGTTCCTGTTCTGCTGCTGGCTTACACAGACCAAGATCAAGTTTTGATTCCACAACTGCAGAGAGCCATTCACTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS GCA 72 bp ATAGTTGCTCGTTTCAGTGGGTCAACCTGCAGCATATaGATCAGGAGAGTGGCGACAGAACGATTGAGATAT +
Preference number: 6 (lower is better)
Translates to: IVARFSGSTCSI*IRRVATERLRY
Trigger: ATATCTCAATCGTTCTGTCGCCACTCTCCTGATGCATATGCTGCAGGTTGACCCACTGAAACGAGCAACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CAA 72 bp AATGGCTCTCTGCAGTTGTGGAATCAAAACTTGATCTaGGTCTGTGTAAGCCAGCAGCAGAACAGGAACGCT +
Preference number: 6 (lower is better)
Translates to: NGSLQLWNQNLI*VCVSQQQNRNA
Trigger: AGCGTTCCTGTTCTGCTGCTGGCTTACACAGACCAAGATCAAGTTTTGATTCCACAACTGCAGAGAGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CAA 72 bp TTAGTCGTATTCAGTGCATCCAATGGACATCTTGCTTaGGGGCTGTCTGCTATAAGAGGTGGCATCCTTTCT +
Preference number: 6 (lower is better)
Translates to: LVVFSASNGHLA*GLSAIRGGILS
Trigger: AGAAAGGATGCCACCTCTTATAGCAGACAGCCCCAAAGCAAGATGTCCATTGGATGCACTGAATACGACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CAA 72 bp AAAGTGAATGGCTCTCTGCAGTTGTGGAATCAAAACTaGATCTTGGTCTGTGTAAGCCAGCAGCAGAACAGG +
Preference number: 6 (lower is better)
Translates to: KVNGSLQLWNQN*ILVCVSQQQNR
Trigger: CCTGTTCTGCTGCTGGCTTACACAGACCAAGATCAAGTTTTGATTCCACAACTGCAGAGAGCCATTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS CCA 72 bp CATCAGGAGAGTGGCGACAGAACGATTGAGATATTCTaGGATATAAAAGACACCCCCTCGGATCTTCTTAAA +
Preference number: 6 (lower is better)
Translates to: HQESGDRTIEIF*DIKDTPSDLLK
Trigger: TTTAAGAAGATCCGAGGGGGTGTCTTTTATATCCCAGAATATCTCAATCGTTCTGTCGCCACTCTCCTGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1
CDS GCA 72 bp TTTAAACCATTCATGCTCTCTTATGTCTTTGATAGTTaGTCGTTTCAGTGGGTCAACCTGCAGCATATGCAT +
Preference number: 6 (lower is better)
Translates to: FKPFMLSYVFDS*SFQWVNLQHMH
Trigger: ATGCATATGCTGCAGGTTGACCCACTGAAACGAGCAACTATCAAAGACATAAGAGAGCATGAATGGTTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371244.9
ENST00000610361.1