Pregenerated sensors for PRKAA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000132356Ensembl transcript IDs: ENST00000296800.4, ENST00000354209.7, ENST00000397128.6, ENST00000505783.5, ENST00000506652.5, ENST00000509874.5, ENST00000513152.1
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACACTTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATaGAGTTCCACATCTAGCCCCAGGCTACCAAGCATTAATTCAATG | + |
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Preference number: 1 (lower is better) Translates to: TLFFHSKGASQNTDP*SSTSSPRLPSINSM Trigger: CATTGAATTAATGCTTGGTAGCCTGGGGCTAGATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAAGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR GCA 90 bp | ACAAAGAGGGAGGGATATGGAAGAAGTTATCCAGACTGTTACTACTaGTGGAAGATACTAGCTATTTATGAAGTTAAGGAGCCCAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: TKREGYGRSYPDCYY*WKILAIYEVKEPRK Trigger: TTTTCTGGGCTCCTTAACTTCATAAATAGCTAGTATCTTCCAGCAGTAGTAACAGTCTGGATAACTTCTTCCATATCCCTCCCTCTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR CCA 90 bp | AAGAGGGAGGGATATGGAAGAAGTTATCCAGACTGTTACTACTGCTaGAAGATACTAGCTATTTATGAAGTTAAGGAGCCCAGAAAACAA | + |
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Preference number: 1 (lower is better) Translates to: KREGYGRSYPDCYYC*KILAIYEVKEPRKQ Trigger: TTGTTTTCTGGGCTCCTTAACTTCATAAATAGCTAGTATCTTCCAGCAGTAGTAACAGTCTGGATAACTTCTTCCATATCCCTCCCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR TCA 90 bp | AGCAAGATTTTTCTTTTGAATTCAGTGCATGATTCTAGAAGTGCTTaGGTCAAATCTACTAGAGTCACCATTTATGCAAGCTATCATGAC | + |
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Preference number: 1 (lower is better) Translates to: SKIFLLNSVHDSRSA*VKSTRVTIYASYHD Trigger: GTCATGATAGCTTGCATAAATGGTGACTCTAGTAGATTTGACTCAAGCACTTCTAGAATCATGCACTGAATTCAAAAGAAAAATCTTGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR GCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTCCGGGAGGTGGAGGTTaGAGTGAGCCGAGACCACAC | + |
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Preference number: 2 (lower is better) Translates to: YDILSSHMPQPGRKVPLSPGGGG*SEPRPH Trigger: GTGTGGTCTCGGCTCACTGCAACCTCCACCTCCCGG...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATCCGAGACCACACCATTaGACTCCAGCCTGGGTGACA | + |
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Preference number: 2 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHPRPHH*TPAWVT Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGTGGTCTCGG...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR TCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAGGCGGGAGAATCACTTaGACCCGGGAGGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: SIFTVISMSVTSKWFRGKGGRIT*TREVEV Trigger: AACCTCCACCTCCCGGGTTCAAGTGATTCTCCCGCC...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTGGGAAGCTGAGGTGGTaGATCACGCGGTCAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: YDILSSHMPQPGRKVPLSGKLRW*ITRSGV Trigger: AACTCCTGACCGCGTGATCCACCACCTCAGCTTCCC...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATTTTGGGAAGCTGAGGTaGTGGATCACGCGGTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHFGKLR*WITRSG Trigger: TCCTGACCGCGTGATCCACCACCTCAGCTTCCCAAA...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATTTTAAAAGGGGGATATaGAGGCCGGGTGCGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHFKRGI*RPGAVA Trigger: AGCCACCGCACCCGGCCTCCATATCCCCCTTTTAAA...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTAAAATTAGCCGGGTGTaGTGGCACACGCCTGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: YDILSSHMPQPGRKVPLSKISRV*WHTPVV Trigger: AACTACAGGCGTGTGCCACCACACCCGGCTAATTTT...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR GCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTAATCCCTGTGCAAATTaGATTCCAAAACGCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: YDILSSHMPQPGRKVPLSNPCAN*IPKRQP Trigger: GGGCTGGCGTTTTGGAATGCAATTTGCACAGGGATT...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAGTAATCCCACCACTTTaGGAAGCTGAGGTGGTGGAT | + |
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Preference number: 2 (lower is better) Translates to: SIFTVISMSVTSKWFRGKVIPPL*EAEVVD Trigger: ATCCACCACCTCAGCTTCCCAAAGTGGTGGGATTAC...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR TCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTATACTCAATAATGACTaGCATGATGGGCCAGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: YDILSSHMPQPGRKVPLSILNND*HDGPEE Trigger: TTCCTCTGGCCCATCATGTCAGTCATTATTGAGTAT...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATGATTCTAGAAGTGCTTaGGTCAAATCTACTAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHDSRSA*VKSTRV Trigger: GACTCTAGTAGATTTGACTCAAGCACTTCTAGAATC...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR TCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTGGAAGCATTTGGCTGTaGCTTATTATGCATGCTTAT | + |
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Preference number: 2 (lower is better) Translates to: YDILSSHMPQPGRKVPLSGSIWL*LIMHAY Trigger: ATAAGCATGCATAATAAGTCACAGCCAAATGCTTCC...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAAAAGAGGGAGGGATATaGAAGAAGTTATCCAGACTG | + |
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Preference number: 2 (lower is better) Translates to: SIFTVISMSVTSKWFRGKKEGGI*KKLSRL Trigger: CAGTCTGGATAACTTCTTCCATATCCCTCCCTCTTT...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTGACTGTTACTACTGCTaGAAGATACTAGCTATTTAT | + |
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Preference number: 2 (lower is better) Translates to: YDILSSHMPQPGRKVPLSDCYYC*KILAIY Trigger: ATAAATAGCTAGTATCTTCCAGCAGTAGTAACAGTC...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CAA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAACAATCCCTGTGCAAATaGCATTCCAAAACGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SIFTVISMSVTSKWFRGKQSLCK*HSKTPA Trigger: GGCTGGCGTTTTGGAATGCAATTTGCACAGGGATTG...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR CCA 72 bp | GGATATGGAAGAAGTTATCCAGACTGTTACTACTGCTaGAAGATACTAGCTATTTATGAAGTTAAGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: GYGRSYPDCYYC*KILAIYEVKEP Trigger: GGGCTCCTTAACTTCATAAATAGCTAGTATCTTCCAGCAGTAGTAACAGTCTGGATAACTTCTTCCATATCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CAA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTATCTGTAGGAGATACTaGAAGTATTTTCACGGTGAT | + |
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Preference number: 3 (lower is better) Translates to: YDILSSHMPQPGRKVPLSICRRY*KYFHGD Trigger: ATCACCGTGAAAATACTTCAAGTATCTCCTACAGAT...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR GCA 72 bp | GAGGGATATGGAAGAAGTTATCCAGACTGTTACTACTaGTGGAAGATACTAGCTATTTATGAAGTTAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: EGYGRSYPDCYY*WKILAIYEVKE Trigger: CTCCTTAACTTCATAAATAGCTAGTATCTTCCAGCAGTAGTAACAGTCTGGATAACTTCTTCCATATCCCTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR-3UTR CAA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAATACAAATGGAAGCATTaGGCTGTGACTTATTATGCA | + |
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Preference number: 3 (lower is better) Translates to: SIFTVISMSVTSKWFRGKYKWKH*AVTYYA Trigger: TGCATAATAAGTCACAGCCAAATGCTTCCATTTGTA...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR GCA 72 bp | TTTAACTATAAATCATGTTCCAATCCCTGTGCAAATTaGATTCCAAAACGCCAGCCCTCGGTTATAATTATG | + |
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Preference number: 3 (lower is better) Translates to: FNYKSCSNPCAN*IPKRQPSVIIM Trigger: CATAATTATAACCGAGGGCTGGCGTTTTGGAATGCAATTTGCACAGGGATTGGAACATGATTTATAGTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| 3UTR TCA 72 bp | TTTCTTTTGAATTCAGTGCATGATTCTAGAAGTGCTTaGGTCAAATCTACTAGAGTCACCATTTATGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: FLLNSVHDSRSA*VKSTRVTIYAS Trigger: GCTTGCATAAATGGTGACTCTAGTAGATTTGACTCAAGCACTTCTAGAATCATGCACTGAATTCAAAAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR GCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATCGCCCGTCGTGTTTCTaGTTCTCGGCTGTCGCCATC | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHRPSCF*FSAVAI Trigger: GATGGCGACAGCCGAGAAGCAGAAACACGACGGGCG...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATTCTTTCTCCAGGAACTaGGTCTGCGCATGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHSFSRN*VCAWRC Trigger: GCAGCGCCATGCGCAGACTCAGTTCCTGGAGAAAGA...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR TCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTGGCGGGAGAATCACTTaGACCCGGGAGGTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSGGRIT*TREVEV Trigger: AACCTCCACCTCCCGGGTTCAAGTGATTCTCCCGCC...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATACCACTTTGGGAAGCTaGGGTGGTGGATCACGCGGT | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHTTLGS*GGGSRG Trigger: ACCGCGTGATCCACCACCTCAGCTTCCCAAAGTGGT...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR GCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAACCGAGACCACACCATTaGACTCCAGCCTGGGTGACA | + |
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Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKPRPHH*TPAWVT Trigger: TGTCACCCAGGCTGGAGTGCAATGGTGTGGTCTCGG...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTTTTGGGAAGCTGAGGTaGTGGATCACGCGGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSFGKLR*WITRSG Trigger: TCCTGACCGCGTGATCCACCACCTCAGCTTCCCAAA...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR GCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCGCCCGTCGTGTTTCTaGTTCTCGGCTGTCGCCATC | + |
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Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHRPSCF*FSAVAI Trigger: GATGGCGACAGCCGAGAAGCAGAAACACGACGGGCG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
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| CDS-3UTR CCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATGTAATCCCACCACTTTaGGAAGCTGAGGTGGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHVIPPL*EAEVVD Trigger: ATCCACCACCTCAGCTTCCCAAAGTGGTGGGATTAC...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATTCGATAGTTGCTAACTaGTCCCGATCTCTGTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHSIVAN*SRSLWS Trigger: ACTCCACAGAGATCGGGATCAGTTAGCAACTATCGA...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATTTGAGCCTCAGCATCTaGATCACTCCTTTGGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHLSLSI*ITPLAR Trigger: TCTTGCCAAAGGAGTGATTCAGATGCTGAGGCTCAA...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR GCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTATCAAGGGTATGGCGTaGCCTTGGTGTTTCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSIKGMA*PWCFSN Trigger: GTTGCTGAAACACCAAGGGCACGCCATACCCTTGAT...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATCCAGAAAGGATCTGTTaGAACAGACGCCGACTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHPERIC*NRRRLS Trigger: AGAAAGTCGGCGTCTGTTCCAACAGATCCTTTCTGG...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTGGTATGGCGTGCCCTTaGTGTTTCAGCAACCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSGMACP*CFSNQE Trigger: TTCTTGGTTGCTGAAACACCAAGGGCACGCCATACC...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR GCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATCTTTCATTCCAAAGGTaGCAGTCAGAACACAGATCC | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHLSFQR*QSEHRS Trigger: GGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAG...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATCCATATATCTACCTCTaGGCCTGCATACAATCTTCC | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHPYIYL*ACIQSS Trigger: GGAAGATTGTATGCAGGCCCAGAGGTAGATATATGG...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATAATTCATCAAGGGTATaGCGTGCCCTTGGTGTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHNSSRV*RALGVS Trigger: TGAAACACCAAGGGCACGCCATACCCTTGATGAATT...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAAAAATTAGCCGGGTGTaGTGGCACACGCCTGTAGTT | + |
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Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKKISRV*WHTPVV Trigger: AACTACAGGCGTGTGCCACCACACCCGGCTAATTTT...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATTTAAAAGGGGGATATaGAGGCCGGGTGCGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKFKRGI*RPGAVA Trigger: AGCCACCGCACCCGGCCTCCATATCCCCCTTTTAAA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAACAGAACACAGATCCATaGAGTTCCACATCTAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKQNTDP*SSTSSP Trigger: GGGGCTAGATGTGGAACTCCATGGATCTGTGTTCTG...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATGAGAACTTCCTCTTCTaGGCACTCAAACTTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHENFLF*ALKLFT Trigger: TGTGAAAAGTTTGAGTGCTCAGAAGAGGAAGTTCTC...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR TCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTTGTTGTAAAGACAGCTaGGAACTTCCTCTTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSCCKDS*ELPLLS Trigger: GCTCAGAAGAGGAAGTTCTCAGCTGTCTTTACAACA...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR TCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTGGTAAGAGAAACTTCTaGGGATTTTCCTTGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSGKRNF*GFSLSL Trigger: GAGGCTCAAGGAAAATCCTCAGAAGTTTCTCTTACC...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR GCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAGAGATGGTAGGCAACTaGCAAAGGATCCTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKEMVGN*QRILVI Trigger: AATCACCAGGATCCTTTGGCAGTTGCCTACCATCTC...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTTGCATACAATCTTCCTaGAATTACTTCTGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSCIQSS*NYFWCS Trigger: GCTGCACCAGAAGTAATTTCAGGAAGATTGTATGCA...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTTCCTGTTATCTATTATaGGATGGTAGGCAACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSSCYLL*DGRQLP Trigger: TGGCAGTTGCCTACCATCTCATAATAGATAACAGGA...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAATCTGAGGATTTTCCTTaGGCCTCAGCATCTGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKSEDFP*ASASES Trigger: TGATTCAGATGCTGAGGCTCAAGGAAAATCCTCAGA...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATGGAAGCATTTGGCTGTaGCTTATTATGCATGCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHGSIWL*LIMHAY Trigger: ATAAGCATGCATAATAAGTCACAGCCAAATGCTTCC...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR GCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATGGTTCTGAATTTCTCTaGGGATTTTTCCTACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHGSEFL*GFFLPH Trigger: ATGTGGTAGGAAAAATCCGCAGAGAAATTCAGAACC...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCTGGTGCAGCATAGTTaGGTGAGCCACAACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHLVQHS*VSHNLF Trigger: GAACAAGTTGTGGCTCACCCAACTATGCTGCACCAG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR CCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATTGTGGCCCTCTTCATaGGATCCACCTGCAGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKLWPSS*DPPAAY Trigger: ATATGCTGCAGGTGGATCCCATGAAGAGGGCCACAA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATAAAAGCTTGAGGTTCTaGATTTCTCTGCGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHKSLRF*ISLRIF Trigger: AAAAATCCGCAGAGAAATTCAGAACCTCAAGCTTTT...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATAAAAATTCTATTGTGTaGCTTCCAGGTCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHKNSIV*LPGLGV Trigger: AACTCCAAGACCTGGAAGTCACACAATAGAATTTTT...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAATACTCAATAATGACTaGCATGATGGGCCAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKILNND*HDGPEE Trigger: TTCCTCTGGCCCATCATGTCAGTCATTATTGAGTAT...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTGATTCTAGAAGTGCTTaGGTCAAATCTACTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSDSRSA*VKSTRV Trigger: GACTCTAGTAGATTTGACTCAAGCACTTCTAGAATC...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCCAGAAAGGATCTGTTaGAACAGACGCCGACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHPERIC*NRRRLS Trigger: AGAAAGTCGGCGTCTGTTCCAACAGATCCTTTCTGG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR TCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAGAATCTTCTGTCGATTaGGTATCTTCACAGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKESSVD*VSSQLL Trigger: AAGTAGCTGTGAAGATACTCAATCGACAGAAGATTC...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATATTGCAGTCTCTTCCTaGAATTACTTCTGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHIAVSS*NYFWCS Trigger: GCTGCACCAGAAGTAATTTCAGGAAGAGACTGCAAT...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR GCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTTGCTCTACATACTTCTaGCATAATATCATTTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSCSTYF*HNIIWS Trigger: CGACCAAATGATATTATGGCAGAAGTATGTAGAGCA...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR GCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATAAAAATCATTTGCATTaGCTCCCTTACCTCTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHKNHLH*LPYLFN Trigger: ATTGAAGAGGTAAGGGAGGCAATGCAAATGATTTTT...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR GCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATAGATTAAAAATCATTTaGATTGCCTCCCTTACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHRLKII*IASLTS Trigger: AGAGGTAAGGGAGGCAATGCAAATGATTTTTAATCT...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATCTTCTTAAAAAGAGTTaGCACATGGTCATCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHLLKKS*HMVIIK Trigger: TTTGATGATGACCATGTGCCAACTCTTTTTAAGAAG...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATTCAGCAACCAAGAATaGTACTCTTTCAGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKFSNQE*YSFRMG Trigger: CCCCATCCTGAAAGAGTACCATTCTTGGTTGCTGAA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR GCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCAGTCAATTCATGTTTaGCAACCTTCACTTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHQSIHV*QPSLCR Trigger: TCGGCAAAGTGAAGGTTGGCAAACATGAATTGACTG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR GCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAACAGTCAATTCATGTTTaGCAACCTTCACTTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKQSIHV*QPSLCR Trigger: TCGGCAAAGTGAAGGTTGGCAAACATGAATTGACTG...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR GCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTATCTGGTTACATAAGTaGTCACTGTATTTGCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSIWLHK*SLYLPK Trigger: TTTTGGCAAATACAGTGAGCACTTATGTAACCAGAT...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAACATGAAAATATCAGATaGTGTACTGATGACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKHENIR*CTDDLV Trigger: TACCAGGTCATCAGTACACCATCTGATATTTTCATG...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTTACACGCAAATAATATaGGTTTACAACCTTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: YDILSSHMPQPGRKVPLSYTQII*VYNLPF Trigger: GAATGGAAGGTTGTAAACCCATATTATTTGCGTGTA...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAAAAAGAGGGAGGGATATaGAAGAAGTTATCCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKKEGGI*KKLSRL Trigger: CAGTCTGGATAACTTCTTCCATATCCCTCCCTCTTT...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 38% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATGAATCTTCTGTCGATTaGGTATCTTCACAGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHESSVD*VSSQLL Trigger: AAGTAGCTGTGAAGATACTCAATCGACAGAAGATTC...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR GCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATGGTTCTGAATTTCTCTaGGGATTTTTCCTACCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHGSEFL*GFFLPH Trigger: ATGTGGTAGGAAAAATCCGCAGAGAAATTCAGAACC...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR GCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATCATTTTGGAGTAAGTaGTTGTCACAGGATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKSFWSK*LSQDSS Trigger: GGAAGAATCCTGTGACAAGCACTTACTCCAAAATGA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR GCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAACCAGACTGTTACTACTaGTGGAAGATACTAGCTATT | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKPDCYY*WKILAI Trigger: AATAGCTAGTATCTTCCAGCAGTAGTAACAGTCTGG...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAAAAAAGAGTTGGCACATaGTCATCATCAAATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKKRVGT*SSSNGR Trigger: CCTTCCATTTGATGATGACCATGTGCCAACTCTTTT...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 37% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAAAAGAAAAGAATCAGGTaGGCTTGTCGCCAAATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKKKRIR*ACRQIE Trigger: TTCTATTTGGCGACAAGCCCACCTGATTCTTTTCTT...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAAACTGTAGACTCATTTTaGAGTAAGTGCTTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKTVDSF*SKCLSQ Trigger: CTGTGACAAGCACTTACTCCAAAATGAGTCTACAGT...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAGTTCTACTATCCACTTaGTATAACTGTAGACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKVLLST*YNCRLI Trigger: AATGAGTCTACAGTTATACCAAGTGGATAGTAGAAC...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CCA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAGACTGTTACTACTGCTaGAAGATACTAGCTATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFTVISMSVTSKWFRGKDCYYC*KILAIY Trigger: ATAAATAGCTAGTATCTTCCAGCAGTAGTAACAGTC...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR TCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATAAAAGCTTGAGGTTCTaGATTTCTCTGCGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHKSLRF*ISLRIF Trigger: AAAAATCCGCAGAGAAATTCAGAACCTCAAGCTTTT...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR TCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCATATTCCATCACCATaGAAATATCAGATGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHHIPSP*KYQMVY Trigger: GTACACCATCTGATATTTTCATGGTGATGGAATATG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR TCA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATCATTTGGTCGACTTTaGCTTCTAATTCCTAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKSFGRL*LLIPKC Trigger: GCATTTAGGAATTAGAAGTCAAAGTCGACCAAATGA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR GCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATTTCACAGCTACTTTATaGCCAGTCAATTCATGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHFTATL*PVNSCL Trigger: CAAACATGAATTGACTGGGCATAAAGTAGCTGTGAA...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR GCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATAAAATTAGGTACTCCTaGCTTACTCACAGCCATATT | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHKIRYS*LTHSHI Trigger: AATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTT...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS-3UTR CCA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCATGAAAATATCAGATaGTGTACTGATGACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LKLGTPALLTAIFLHKSHHENIR*CTDDLV Trigger: TACCAGGTCATCAGTACACCATCTGATATTTTCATG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296800.4 |
||
| CDS CCA 90 bp | TTCATCAAGGGTATGGCGTGCCCTTGGTGTTTCAGCAACCAAGAATaGTACTCTTTCAGGATGGGGCCGAGTCAGGTGATGATCATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FIKGMACPWCFSNQE*YSFRMGPSQVMIIK Trigger: CTTGATGATCATCACCTGACTCGGCCCCATCCTGAAAGAGTACCATTCTTGGTTGCTGAAACACCAAGGGCACGCCATACCCTTGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 |
||
| CDS-3UTR CAA 90 bp | TATGATATATTAAGCTCCCATATGCCCCAACCTGGTAGAAAAGTTCCTCTCAGTAGGCGGGAGAATCACTaGAACCCGGGAGGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YDILSSHMPQPGRKVPLSRRENH*NPGGGG Trigger: ACCTCCACCTCCCGGGTTCAAGTGATTCTCCCGCCT...ACTGAGAGGAACTTTTCTACCAGGTTGGGGCATATGGGAGCTTAATATATCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CAA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAAGGGTATGGCGTGCCCTaGGTGTTTCAGCAACCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIFTVISMSVTSKWFRGKGYGVP*VFQQPR Trigger: TCTTGGTTGCTGAAACACCAAGGGCACGCCATACCC...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATCAATCCCTGTGCAAATaGCATTCCAAAACGCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHQSLCK*HSKTPA Trigger: GGCTGGCGTTTTGGAATGCAATTTGCACAGGGATTG...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS CCA 90 bp | ACACCTTGGTGTTTGGATTTCTGTGGATTTAATTCATCAAGGGTATaGCGTGCCCTTGGTGTTTCAGCAACCAAGAATGGTACTCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: TPWCLDFCGFNSSRV*RALGVSATKNGTLS Trigger: TGAAAGAGTACCATTCTTGGTTGCTGAAACACCAAGGGCACGCCATACCCTTGATGAATTAAATCCACAGAAATCCAAACACCAAGGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 |
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| CDS-3UTR CAA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATTGTTCCCTGATATCTTaGATTGTGGCCCTCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHCSLIS*IVALFM Trigger: CATGAAGAGGGCCACAATCAAAGATATCAGGGAACA...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATGTAGCAGTCCCTGATTaGGCTTCTGTAATTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHVAVPD*ASVISS Trigger: TGATGAAATTACAGAAGCCAAATCAGGGACTGCTAC...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATACCAGAAAGGATCTGTaGGAACAGACGCCGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: LKLGTPALLTAIFLHKSHTRKDL*EQTPTF Trigger: GAAAGTCGGCGTCTGTTCCAACAGATCCTTTCTGGT...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATGTGACTTCCAGGTCTaGGAGTTAGGTCAACAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKCDFQV*ELGQQE Trigger: CTCCTGTTGACCTAACTCCAAGACCTGGAAGTCACA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCCAGTCAATTCATGTTaGCCAACCTTCACTTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: LKLGTPALLTAIFLHKSHPVNSC*PTFTLP Trigger: CGGCAAAGTGAAGGTTGGCAAACATGAATTGACTGG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAACCAGTCAATTCATGTTaGCCAACCTTCACTTTGCCG | + |
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Preference number: 5 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKPVNSC*PTFTLP Trigger: CGGCAAAGTGAAGGTTGGCAAACATGAATTGACTGG...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAACGAATCTTCTGTCGATaGAGTATCTTCACAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: SIFTVISMSVTSKWFRGKRIFCR*SIFTAT Trigger: AGTAGCTGTGAAGATACTCAATCGACAGAAGATTCG...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | TTTTCTTTCATTCCAAAGGTGCCAGTCAGAACACAGATCCATGGAGTTCCACATCATCTGACATCATGTTaGAAAGACCAAAATCAGCTA | + |
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Preference number: 5 (lower is better) Translates to: FSFIPKVPVRTQIHGVPHHLTSC*KDQNQL Trigger: TAGCTGATTTTGGTCTTTCAAACATGATGTCAGATG...ATGTGGAACTCCATGGATCTGTGTTCTGACTGGCACCTTTGGAATGAAAGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS GCA 90 bp | TTCATTCATTATTCTCCTGTTATCTATTATGAGATGGTAGGCAACTaGCAAAGGATCCTGGTGATTTCTGTTGTAAAGACAGCTGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: FIHYSPVIYYEMVGN*QRILVISVVKTAEN Trigger: GTTCTCAGCTGTCTTTACAACAGAAATCACCAGGATCCTTTGGCAGTTGCCTACCATCTCATAATAGATAACAGGAGAATAATGAATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 ENST00000506652.5 |
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| CDS GCA 90 bp | TTCTACTATCCACTTGGTATAACTGTAGACTCATTTTGGAGTAAGTaGTTGTCACAGGATTCTTCCTTCGTACACGCAAATAATATGGGT | + |
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Preference number: 5 (lower is better) Translates to: FYYPLGITVDSFWSK*LSQDSSFVHANNMG Trigger: ACCCATATTATTTGCGTGTACGAAGGAAGAATCCTGTGACAAGCACTTACTCCAAAATGAGTCTACAGTTATACCAAGTGGATAGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000513152.1 |
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| CDS CCA 90 bp | GTAGATAAGTTCTACTATCCACTTGGTATAACTGTAGACTCATTTTaGAGTAAGTGCTTGTCACAGGATTCTTCCTTCGTACACGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: VDKFYYPLGITVDSF*SKCLSQDSSFVHAN Trigger: ATTTGCGTGTACGAAGGAAGAATCCTGTGACAAGCACTTACTCCAAAATGAGTCTACAGTTATACCAAGTGGATAGTAGAACTTATCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000513152.1 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATGCTTTCCTTACACCTaGGTGTTTGGATTTCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKCFPYT*VFGFLW Trigger: CCACAGAAATCCAAACACCAAGGTGTAAGGAAAGCA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | AGTATTTTCACGGTGATAAGTATGTCTGTAACATCCAAATGGTTCAGGGGGAAATTCCTAAATGCCATTTaGCTTTCCTTACACCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SIFTVISMSVTSKWFRGKFLNAI*LSLHLG Trigger: ACCAAGGTGTAAGGAAAGCAAAATGGCATTTAGGAA...TTTCCCCCTGAACCATTTGGATGTTACAGACATACTTATCACCGTGAAAATACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCGAATCTTCTGTCGATaGAGTATCTTCACAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: LKLGTPALLTAIFLHKSHRIFCR*SIFTAT Trigger: AGTAGCTGTGAAGATACTCAATCGACAGAAGATTCG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAAAAGAATCAGGTGGGCTaGTCGCCAAATAGAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKKNQVG*SPNRNL Trigger: AAGATTTCTATTTGGCGACAAGCCCACCTGATTCTT...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS TCA 90 bp | TTGATTGCTCTACATACTTCTGCCATAATATCATTTGGTCGACTTTaGCTTCTAATTCCTAAATGCCATTTTGCTTTCCTTACACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LIALHTSAIISFGRL*LLIPKCHFAFLTPW Trigger: CCAAGGTGTAAGGAAAGCAAAATGGCATTTAGGAATTAGAAGTCAAAGTCGACCAAATGATATTATGGCAGAAGTATGTAGAGCAATCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 |
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| CDS-3UTR CAA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATACAAATCTCATTTCTTaGAGCAGTCTAGGCCAACAA | + |
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Preference number: 5 (lower is better) Translates to: LKLGTPALLTAIFLHKSHTNLIS*SSLGQQ Trigger: TTGTTGGCCTAGACTGCTCAAAGAAATGAGATTTGT...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000296800.4 |
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| CDS-3UTR CAA 90 bp | CTAAAATTAGGTACTCCTGCCTTACTCACAGCCATATTTTTACACAAATCTCATCATCTGACATCATGTTaGAAAGACCAAAATCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LKLGTPALLTAIFLHKSHHLTSC*KDQNQL Trigger: TAGCTGATTTTGGTCTTTCAAACATGATGTCAGATG...ATGAGATTTGTGTAAAAATATGGCTGTGAGTAAGGCAGGAGTACCTAATTTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000296800.4 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAACTTACACCTTGGTGTTaGGATTTCTGTGGATTTAAT | + |
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Preference number: 5 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKLTPWC*DFCGFN Trigger: ATTAAATCCACAGAAATCCAAACACCAAGGTGTAAG...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATACAAATGGAAGCATTaGGCTGTGACTTATTATGCA | + |
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Preference number: 5 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKYKWKH*AVTYYA Trigger: TGCATAATAAGTCACAGCCAAATGCTTCCATTTGTA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAATCACCTATAAAGGTCTaGGGAATTCTAGGCAAATAT | + |
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Preference number: 5 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKSPIKV*GILGKY Trigger: ATATTTGCCTAGAATTCCCAAGACCTTTATAGGTGA...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS-3UTR CAA 90 bp | TTACAAATGGAAGCATTTGGCTGTGACTTATTATGCATGCTTATTGCTGCAAAAATCTGTAGGAGATACTaGAAGTATTTTCACGGTGAT | + |
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Preference number: 5 (lower is better) Translates to: LQMEAFGCDLLCMLIAAKICRRY*KYFHGD Trigger: ATCACCGTGAAAATACTTCAAGTATCTCCTACAGAT...TTTTGCAGCAATAAGCATGCATAATAAGTCACAGCCAAATGCTTCCATTTGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000397128.6 |
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| CDS TCA 72 bp | TCTGCTTCTCGGCTGTCGCCATCTTTCTCCAGGAACTaGGTCTGCGCATGGCGCTGCGGGAGGGGGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SASRLSPSFSRN*VCAWRCGRGRR Trigger: CCTCCGCCCCCTCCCGCAGCGCCATGCGCAGACTCAGTTCCTGGAGAAAGATGGCGACAGCCGAGAAGCAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000354209.7 |
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| CDS CCA 72 bp | GGTATGGCGTGCCCTTGGTGTTTCAGCAACCAAGAATaGTACTCTTTCAGGATGGGGCCGAGTCAGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: GMACPWCFSNQE*YSFRMGPSQVM Trigger: CATCACCTGACTCGGCCCCATCCTGAAAGAGTACCATTCTTGGTTGCTGAAACACCAAGGGCACGCCATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 |
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| CDS CAA 90 bp | GTTTGGATTTCTGTGGATTTAATTCATCAAGGGTATGGCGTGCCCTaGGTGTTTCAGCAACCAAGAATGGTACTCTTTCAGGATGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: VWISVDLIHQGYGVP*VFQQPRMVLFQDGA Trigger: GGCCCCATCCTGAAAGAGTACCATTCTTGGTTGCTGAAACACCAAGGGCACGCCATACCCTTGATGAATTAAATCCACAGAAATCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 |
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| CDS CAA 72 bp | ATGCCTGTGACAATAATCCACACCAGAAAGGATCTGTaGGAACAGACGCCGACTTTCTTTTTCATCCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: MPVTIIHTRKDL*EQTPTFFFIQP Trigger: AGGCTGGATGAAAAAGAAAGTCGGCGTCTGTTCCAACAGATCCTTTCTGGTGTGGATTATTGTCACAGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000296800.4 ENST00000397128.6 ENST00000506652.5 ENST00000509874.5 |
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| CDS CAA 72 bp | ATGCCTGTGACAATAATCCACACCAGAAAGGATCTGTaGGAACAGACGCCGACTTTCTTTTTCATCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: MPVTIIHTRKDL*EQTPTFFFIQL Trigger: GAGCTGGATGAAAAAGAAAGTCGGCGTCTGTTCCAACAGATCCTTTCTGGTGTGGATTATTGTCACAGGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000354209.7 |
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| CDS TCA 72 bp | CCAAAGGATCCTGGTGATTTCTGTTGTAAAGACAGCTaGGAACTTCCTCTTCTGAGCACTCAAACTTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PKDPGDFCCKDS*ELPLLSTQTFH Trigger: GTGAAAAGTTTGAGTGCTCAGAAGAGGAAGTTCTCAGCTGTCTTTACAACAGAAATCACCAGGATCCTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 ENST00000506652.5 |
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| CDS GCA 72 bp | ATATCTTTGATTGTGGCCCTCTTCATGGGATCCACCTaGAGCATATGTTTCAAAAGGCTAATCACAGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ISLIVALFMGST*SICFKRLITEG Trigger: TCCTTCTGTGATTAGCCTTTTGAAACATATGCTGCAGGTGGATCCCATGAAGAGGGCCACAATCAAAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 ENST00000506652.5 |
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| CDS CCA 72 bp | CCGAGTCAGGTGATGATCATCAAGAAAAGAATCAGGTaGGCTTGTCGCCAAATAGAAATCTTTGGCTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: PSQVMIIKKRIR*ACRQIEIFGFI Trigger: AATGAAGCCAAAGATTTCTATTTGGCGACAAGCCCACCTGATTCTTTTCTTGATGATCATCACCTGACTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 ENST00000506652.5 |
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| CDS CCA 72 bp | TGTTTGGATTTCTGTGGATTTAATTCATCAAGGGTATaGCGTGCCCTTGGTGTTTCAGCAACCAAGAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: CLDFCGFNSSRV*RALGVSATKNG Trigger: ACCATTCTTGGTTGCTGAAACACCAAGGGCACGCCATACCCTTGATGAATTAAATCCACAGAAATCCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 |
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| CDS GCA 72 bp | CCACTTGGTATAACTGTAGACTCATTTTGGAGTAAGTaGTTGTCACAGGATTCTTCCTTCGTACACGCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: PLGITVDSFWSK*LSQDSSFVHAN Trigger: ATTTGCGTGTACGAAGGAAGAATCCTGTGACAAGCACTTACTCCAAAATGAGTCTACAGTTATACCAAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000513152.1 |
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| CDS GCA 72 bp | TATTCTCCTGTTATCTATTATGAGATGGTAGGCAACTaGCAAAGGATCCTGGTGATTTCTGTTGTAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: YSPVIYYEMVGN*QRILVISVVKT Trigger: TGTCTTTACAACAGAAATCACCAGGATCCTTTGGCAGTTGCCTACCATCTCATAATAGATAACAGGAGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 ENST00000506652.5 |
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| CDS CCA 72 bp | TTCTACTATCCACTTGGTATAACTGTAGACTCATTTTaGAGTAAGTGCTTGTCACAGGATTCTTCCTTCGTA | + |
|
Preference number: 6 (lower is better) Translates to: FYYPLGITVDSF*SKCLSQDSSFV Trigger: TACGAAGGAAGAATCCTGTGACAAGCACTTACTCCAAAATGAGTCTACAGTTATACCAAGTGGATAGTAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000513152.1 |
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| CDS CAA 72 bp | TCAGGTGATGATCATCAAGAAAAGAATCAGGTGGGCTaGTCGCCAAATAGAAATCTTTGGCTTCATTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: SGDDHQEKNQVG*SPNRNLWLHSL Trigger: TAATGAATGAAGCCAAAGATTTCTATTTGGCGACAAGCCCACCTGATTCTTTTCTTGATGATCATCACCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 ENST00000506652.5 |
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| CDS TCA 72 bp | CTACATACTTCTGCCATAATATCATTTGGTCGACTTTaGCTTCTAATTCCTAAATGCCATTTTGCTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LHTSAIISFGRL*LLIPKCHFAFL Trigger: AAGGAAAGCAAAATGGCATTTAGGAATTAGAAGTCAAAGTCGACCAAATGATATTATGGCAGAAGTATGTAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000354209.7 ENST00000397128.6 ENST00000505783.5 |
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