RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRIMA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000175785

Ensembl transcript IDs: ENST00000316227.3, ENST00000393140.6, ENST00000393143.5, ENST00000477603.5, ENST00000611347.2, ENST00000617019.3, ENST00000627063.2, ENST00000629961.2

Found 904 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGACACTGCCCAGGTGCTGCGCCGGGCTCAGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAAT +
Preference number: 1 (lower is better)
Translates to: GHCPGAAPGSAWCPS*LGPQADQGQAWEDN
Trigger: ATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR TCA 90 bp TGCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAG +
Preference number: 1 (lower is better)
Translates to: CAGLSLVSELPGPAG*PGASLGRQWFLLRE
Trigger: CTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR CCA 90 bp TGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAG +
Preference number: 1 (lower is better)
Translates to: WCPSCLGPQADQGQA*EDNGFSFGRLRACE
Trigger: CTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR CCA 90 bp AGTCTGAGGACAGGTGCAGTGGCCTCTGCCCTTGCCCAGTGGCCCTaGGCTGCGGGTTCAGTGAGTCGTTTTGCCCCCGGAAGGCCAGAC +
Preference number: 1 (lower is better)
Translates to: SLRTGAVASALAQWP*AAGSVSRFAPGRPD
Trigger: GTCTGGCCTTCCGGGGGCAAAACGACTCACTGAACCCGCAGCCCAGGGCCACTGGGCAAGGGCAGAGGCCACTGCACCTGTCCTCAGACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 90 bp TCACCCTGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTaGCACTTGGGAGACAGGCCAACAGGGCAGGGGTCACCAGCCTGG +
Preference number: 1 (lower is better)
Translates to: SPCLRGFPDVAHREG*HLGDRPTGQGSPAW
Trigger: CCAGGCTGGTGACCCCTGCCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACAGGGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 90 bp CCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTaGAGGCTGGACTCACAGCCCTCCATGGCAGGCAGTCAGGAGCCT +
Preference number: 1 (lower is better)
Translates to: PPSVNALLCLLRRGF*RLDSQPSMAGSQEP
Trigger: AGGCTCCTGACTGCCTGCCATGGAGGGCTGTGAGTCCAGCCTGCAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGTT +
Preference number: 1 (lower is better)
Translates to: STCFPMSTSATKVSL*PAGPGPADSHHCVV
Trigger: AACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CCA 90 bp GTACAACAGTCAGGCCTCAGGGGACTGTGGGGGACATCCAGCGCCTaGCCAGCATCAGCCTGGTACAGCAGGCCCACAGTGGATTTGGCA +
Preference number: 1 (lower is better)
Translates to: VQQSGLRGLWGTSSA*PASAWYSRPTVDLA
Trigger: TGCCAAATCCACTGTGGGCCTGCTGTACCAGGCTGATGCTGGCCAGGCGCTGGATGTCCCCCACAGTCCCCTGAGGCCTGACTGTTGTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 90 bp CACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGC +
Preference number: 1 (lower is better)
Translates to: HQCHQGVPLASGSRA*RLTPLRCSRLLLCC
Trigger: GCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CCA 90 bp GGACAGCCCAAGGCATGGGCACTTTCTCATGGTTGCAGCACAGGGTaGTGTGTGCTTAGGGCTAGGGTCCTGCCCAGGGGTCTGCTTAGG +
Preference number: 1 (lower is better)
Translates to: GQPKAWALSHGCSTG*CVLRARVLPRGLLR
Trigger: CCTAAGCAGACCCCTGGGCAGGACCCTAGCCCTAAGCACACACCACCCTGTGCTGCAACCATGAGAAAGTGCCCATGCCTTGGGCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp ACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAGACACCAGACAGGGAGGAGGATGTG +
Preference number: 1 (lower is better)
Translates to: TDPSGFASAHALDSS*GQSTDQTPDREEDV
Trigger: CACATCCTCCTCCCTGTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAGGGATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR TCA 90 bp CCCTCTGGCCTATTTGTCAGCTGGCTCCGCACCTCAAGAGCACTGTaGAGTACTGGCCAGGTCAGGAGCAGGGGGTGGCACTATGCTGAT +
Preference number: 1 (lower is better)
Translates to: PSGLFVSWLRTSRAL*STGQVRSRGWHYAD
Trigger: ATCAGCATAGTGCCACCCCCTGCTCCTGACCTGGCCAGTACTTCACAGTGCTCTTGAGGTGCGGAGCCAGCTGACAAATAGGCCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 90 bp GTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTaGGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCAT +
Preference number: 1 (lower is better)
Translates to: VSLWPAGPGPADSHH*VVHVYSFVALRSTH
Trigger: ATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CCA 90 bp TTCCAGGAGATGCAAAATCACCCTGTCTCCGTGGGTTTCCTGATGTaGCCCACAGGGAAGGCTGCCACTTGGGAGACAGGCCAACAGGGC +
Preference number: 1 (lower is better)
Translates to: FQEMQNHPVSVGFLM*PTGKAATWETGQQG
Trigger: GCCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACAGGGTGATTTTGCATCTCCTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp GTCTGCTGGGTTTCCCCCTTTAACCTGCTGCTGGCCCACACCCTCTaGCCTATTTGTCAGCTGGCTCCGCACCTCAAGAGCACTGTGAAG +
Preference number: 1 (lower is better)
Translates to: VCWVSPFNLLLAHTL*PICQLAPHLKSTVK
Trigger: CTTCACAGTGCTCTTGAGGTGCGGAGCCAGCTGACAAATAGGCCAGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGGAAACCCAGCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp GGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTaGGACAATGGGCTTTTTAAGGTTCGGCCCAAATGGGGACCGGTT +
Preference number: 1 (lower is better)
Translates to: GQDNDTQTAPWALGL*DNGLFKVRPKWGPV
Trigger: AACCGGTCCCCATTTGGGCCGAACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR TCA 90 bp AGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTaGGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCA +
Preference number: 1 (lower is better)
Translates to: SLGRQWFLLREAQGL*GNEVLDKLRVSSCP
Trigger: TGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR TCA 90 bp TCATTTTCCAGGAGATGCAAAATCACCCTGTCTCCGTGGGTTTCCTaGTGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACAGGCCAAC +
Preference number: 1 (lower is better)
Translates to: SFSRRCKITLSPWVS*CGPQGRLPLGRQAN
Trigger: GTTGGCCTGTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACAGGGTGATTTTGCATCTCCTGGAAAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR TCA 90 bp AACAACTGCAGATGGGGCGATGAACAGATGTGTGGGAAGCACCTTTaGAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTG +
Preference number: 1 (lower is better)
Translates to: NNCRWGDEQMCGKHL*KGTSVCWLCRWLLL
Trigger: CAACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACACATCTGTTCATCGCCCCATCTGCAGTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 90 bp GCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGGGATACTCAGCAACGCTGGTGCCAT +
Preference number: 1 (lower is better)
Translates to: ACRLTPLRCSRLLLC*SAKHSWDTQQRWCH
Trigger: ATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR GCA 90 bp GGAGGCAAACCAGGTCTTAGAGGGCTCGACAGTGGAACCATTCAATaGATTGGGCTCCTTCTGAGCACATATGTAGGGGTGGTGGGGAGA +
Preference number: 1 (lower is better)
Translates to: GGKPGLRGLDSGTIQ*IGLLLSTYVGVVGR
Trigger: TCTCCCCACCACCCCTACATATGTGCTCAGAAGGAGCCCAATGCATTGAATGGTTCCACTGTCGAGCCCTCTAAGACCTGGTTTGCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTaGAGGGCTCAGCGCTTCTATAGCATGAGACTGTGGAAACAGACA +
Preference number: 1 (lower is better)
Translates to: PSPPVPFHPLILQPR*RAQRFYSMRLWKQT
Trigger: TGTCTGTTTCCACAGTCTCATGCTATAGAAGCGCTGAGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp TTTACAAGCCCAGCTGAGAGGGAATTTATGTGCAGACTAGAGCCCTaGATGCGTCAGCGGCTCAGGGAAGAGGATACAGGCCCCAAAACG +
Preference number: 1 (lower is better)
Translates to: FTSPAEREFMCRLEP*MRQRLREEDTGPKT
Trigger: CGTTTTGGGGCCTGTATCCTCTTCCCTGAGCCGCTGACGCATCCAGGGCTCTAGTCTGCACATAAATTCCCTCTCAGCTGGGCTTGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 90 bp CAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCG +
Preference number: 1 (lower is better)
Translates to: QTHTTALFTSTPLLL*EALMGYSATLVPFS
Trigger: CGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CCA 90 bp CTCCAACCACGCTGGAGGGCTCAGCGCTTCTATAGCATGAGACTGTaGAAACAGACATTGAAAGGAAGACCCTGGAAGAACAACACCTCC +
Preference number: 1 (lower is better)
Translates to: LQPRWRAQRFYSMRL*KQTLKGRPWKNNTS
Trigger: GGAGGTGTTGTTCTTCCAGGGTCTTCCTTTCAATGTCTGTTTCCACAGTCTCATGCTATAGAAGCGCTGAGCCCTCCAGCGTGGTTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp TTCTATAGCATGAGACTGTGGAAACAGACATTGAAAGGAAGACCCTaGAAGAACAACACCTCCTTCTTGGCGACTGGGGCTCGGGGTAGG +
Preference number: 1 (lower is better)
Translates to: FYSMRLWKQTLKGRP*KNNTSFLATGARGR
Trigger: CCTACCCCGAGCCCCAGTCGCCAAGAAGGAGGTGTTGTTCTTCCAGGGTCTTCCTTTCAATGTCTGTTTCCACAGTCTCATGCTATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp GCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTCGGCCCAAATaGGGACCGGTTTTCAGGTGTGTCTGTCTTCTCTGGACTTCAAAG +
Preference number: 1 (lower is better)
Translates to: ALGLWDNGLFKVRPK*GPVFRCVCLLWTSK
Trigger: CTTTGAAGTCCAGAGAAGACAGACACACCTGAAAACCGGTCCCCATTTGGGCCGAACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 90 bp CTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTG +
Preference number: 1 (lower is better)
Translates to: LRCSRLLLCCSAKHS*DTQQRWCHFRLFSV
Trigger: CACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CCA 90 bp TTCCGGTACAAAAGTCTCAGCAGGAAACCAACCTTAATGGCTTGTTaGTGGATAAGACGGCATCAACTTGTACATTTGCCCATTGAGAGA +
Preference number: 1 (lower is better)
Translates to: FRYKSLSRKPTLMAC*WIRRHQLVHLPIER
Trigger: TCTCTCAATGGGCAAATGTACAAGTTGATGCCGTCTTATCCACCAACAAGCCATTAAGGTTGGTTTCCTGCTGAGACTTTTGTACCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 90 bp CGCGGCACGTTGCTAAGAAGGCAGATTTCAGGATATTCACATTCATaGATTACGTATCTCACACTACCTGGGCAGTTTAACTCATACTTT +
Preference number: 1 (lower is better)
Translates to: RGTLLRRQISGYSHS*ITYLTLPGQFNSYF
Trigger: AAAGTATGAGTTAAACTGCCCAGGTAGTGTGAGATACGTAATGCATGAATGTGAATATCCTGAAATCTGCCTTCTTAGCAACGTGCCGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 2 (lower is better)
Translates to: APGSAWCPSCLGPQADQGADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR TCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCCTAACGCGTGCCCCGTaGGGCTCCGGAAATGCTAGA +
Preference number: 2 (lower is better)
Translates to: VPPRCPSGQRVQGLQTHTLTRAP*GSGNAR
Trigger: TCTAGCATTTCCGGAGCCCCACGGGGCACGCGTTAG...GGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSTKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR CAA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTaGGGAGACAGGCCAACAGGGCAGGGGTCACCAGCCTGGAGGACC +
Preference number: 2 (lower is better)
Translates to: CLRGFPDVAHREGCH*GDRPTGQGSPAWRT
Trigger: GGTCCTCCAGGCTGGTGACCCCTGCCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 2 (lower is better)
Translates to: LPATVERQIPLASPVRMLPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDAWCPS*LGPQAD
Trigger: GTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGC...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 2 (lower is better)
Translates to: SLPATVERQIPLASPVRMGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCGAGGCTCAGGGCCTGTaGGGCAATGAAGTCCTGGAC +
Preference number: 2 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSEAQGL*GNEVLD
Trigger: GTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTC...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGACCCAGCCTGGCTCTaGAGCTCTGTGAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQDPAWL*SSVSQL
Trigger: CAGCTGACTCACAGAGCTGCAGAGCCAGGCTGGGTC...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: LPATVERQIPLASPVRMLGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRTKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACTCTGCCCTTGCCCAGTaGCCCTGGGCTGCGGGTTCA +
Preference number: 2 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDSALAQ*PWAAGS
Trigger: TGAACCCGCAGCCCAGGGCCACTGGGCAAGGGCAGA...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTGGCCTCAGGGGACTGTaGGGGACATCCAGCGCCTGG +
Preference number: 2 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAGLRGL*GTSSAW
Trigger: CCAGGCGCTGGATGTCCCCCACAGTCCCCTGAGGCC...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGACCCAGCCTGGCTCTaGAGCTCTGTGAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFDPAWL*SSVSQL
Trigger: CAGCTGACTCACAGAGCTGCAGAGCCAGGCTGGGTC...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: LPATVERQIPLASPVRMLTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: DTAPECKRTPVSAQEGILTKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTCTTGCCCAGTGGCCCTaGGCTGCGGGTTCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPLAQWP*AAGSVS
Trigger: ACTCACTGAACCCGCAGCCCAGGGCCACTGGGCAAG...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAGTAGTGGCCTCTGCTaGCTAAGGCAGGGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDSSGLC*LRQGLA
Trigger: AGCCAGGCCCTGCCTTAGTCAGCAGAGGCCACTACT...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCGACCCAGCCTGGCTCTaGAGCTCTGTGAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLDPAWL*SSVSQL
Trigger: CAGCTGACTCACAGAGCTGCAGAGCCAGGCTGGGTC...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTTCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: ASWEEERFSGREWAPDHLSHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLTKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR CAA 90 bp CCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTaGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGA +
Preference number: 2 (lower is better)
Translates to: PSGQRVQGLQTHTTA*FTSTPLLLCEALMG
Trigger: TCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR TCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTCTCTGGGAGAGGGCCTaGGTACAACAGTCAGGCCTC +
Preference number: 2 (lower is better)
Translates to: PSPPVPFHPLILQPRWRALWERA*VQQSGL
Trigger: GAGGCCTGACTGTTGTACTCAGGCCCTCTCCCAGAG...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTAWCPS*LGPQAD
Trigger: GTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGC...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 2 (lower is better)
Translates to: DASVPMGSSVGMSLRTGATLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTCTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPLRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTAAGGGGACGTCTGTCTaGTGGCTGTGCCGATGGCTT +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPKGTSV*WLCRWL
Trigger: AAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGGGGACCAGGCGAGTGTaGGCAAAGCTGGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLGTRRV*AKLGCA
Trigger: GGCACAGCCCAGCTTTGCGCACACTCGCCTGGTCCC...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACCTAACGCGTGCCCCGTaGGGCTCCGGAAATGCTAGA +
Preference number: 2 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDLTRAP*GSGNAR
Trigger: TCTAGCATTTCCGGAGCCCCACGGGGCACGCGTTAG...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 2 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTACACAGACAGCTCCGTaGGCACTAGGACTCTGGGAC +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPTQTAP*ALGLWD
Trigger: GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTTGTGGGAAGCACCTTTaGAAGGGGACGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPCGKHL*KGTSVC
Trigger: GCAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACA...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTCTGCAGATGGGGCGATaGACAGATGTGTGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPLQMGR*TDVWEA
Trigger: TGCTTCCCACACATCTGTTCATCGCCCCATCTGCAG...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTTCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: PSPPVPFHPLILQPRWRASHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACTCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDSHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGCTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: DTAPECKRTPVSAQEGILLRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTAAGGGGACGTCTGTCTaGTGGCTGTGCCGATGGCTT +
Preference number: 2 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAKGTSV*WLCRWL
Trigger: AAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACACGCACTCCTGTGTCTaGTCAGGAGGGGATTCTGCA +
Preference number: 2 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDTHSCV*SGGDSA
Trigger: TGCAGAATCCCCTCCTGAGCAGACACAGGAGTGCGT...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 2 (lower is better)
Translates to: STCFPMSTSATKVSLWPASAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAAAGACAGATCCCTCTaGCTTCGCCAGTGCGCATGC +
Preference number: 2 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDKDRSL*LRQCAC
Trigger: GCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTT...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCGGGACGTCTGTCTGCTaGCTGTGCCGATGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAGTSVC*LCRWLL
Trigger: CAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCC...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACCTTCTGTTGAGAATGTaGACAGTGGAGCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDLLLRM*TVEQAG
Trigger: GCCTGCCTGCTCCACTGTTCACATTCTCAACAGAAG...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTCTGCAGATGGGGCGATaGACAGATGTGTGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: PPCHSRKTDPSGFASAHALQMGR*TDVWEA
Trigger: TGCTTCCCACACATCTGTTCATCGCCCCATCTGCAG...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACGGAGAAGGCAGGCCCTaGAGATTGACAACAACTGCA +
Preference number: 2 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDGEGRP*RLTTTA
Trigger: TGCAGTTGTTGTCAATCTTCAGGGCCTGCCTTCTCC...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTGGAGAAGGCAGGCCCTaGAGATTGACAACAACTGCA +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPGEGRP*RLTTTA
Trigger: TGCAGTTGTTGTCAATCTTCAGGGCCTGCCTTCTCC...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTATCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLSHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 2 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTTKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGAGGCAATGAAGTCCTaGACAAGCTCAGGGTTAGCT +
Preference number: 2 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSEAMKS*TSSGLA
Trigger: AGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTC...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: PPCHSRKTDPSGFASAHADQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTGGGAAGGCTGCCACTTaGGAGACAGGCCAACAGGGC +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIGKAAT*ETGQQG
Trigger: GCCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCC...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTAAGGTTCGGCCCAAATaGGGACCGGTTTTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPKVRPK*GPVFRC
Trigger: ACACCTGAAAACCGGTCCCCATTTGGGCCGAACCTT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCTGTGGGAAGCACCTTTaGAAGGGGACGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVACGKHL*KGTSVC
Trigger: GCAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACA...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp CACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGGACCCAGCCTGGCTCTaGAGCTCTGTGAGTCAGCTG +
Preference number: 2 (lower is better)
Translates to: HHCVVHVYSFVALRSTHGDPAWL*SSVSQL
Trigger: CAGCTGACTCACAGAGCTGCAGAGCCAGGCTGGGTC...CCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp AAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: KVSLWPAGPGPADSHHCVTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...AACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 2 (lower is better)
Translates to: STCFPMSTSATKVSLWPATPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 2 (lower is better)
Translates to: SLPATVERQIPLASPVRMADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 2 (lower is better)
Translates to: DTAPECKRTPVSAQEGILRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGTCTGTCTGCTGGCTGTaGCGATGGCTTCTGTTGAGA +
Preference number: 2 (lower is better)
Translates to: DTAPECKRTPVSAQEGILSVCWL*RWLLLR
Trigger: TCTCAACAGAAGCCATCGGCACAGCCAGCAGACAGA...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACGAGGCAATGAAGTCCTaGACAAGCTCAGGGTTAGCT +
Preference number: 2 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDEAMKS*TSSGLA
Trigger: AGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTC...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: DTAPECKRTPVSAQEGILSLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: LPATVERQIPLASPVRMLDQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACGGACCATCTTTCTTTTaGCTAAAGGGGGAAGCCTCC +
Preference number: 2 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDGPSFF*LKGEAS
Trigger: GGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCC...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCTTTTCCGGCAGGGAGTaGGCTCCGGACCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAFSGRE*APDHLS
Trigger: AGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAAA...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATTTTTCCGGCAGGGAGTaGGCTCCGGACCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHFSGRE*APDHLS
Trigger: AGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAAA...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTGGGACGTCTGTCTGCTaGCTGTGCCGATGGCTTCTG +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIGTSVC*LCRWLL
Trigger: CAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCC...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGACAACACCTCCTTCTTaGCGACTGGGGCTCGGGGTA +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLTTPPS*RLGLGV
Trigger: TACCCCGAGCCCCAGTCGCCAAGAAGGAGGTGTTGT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGTCACTCCTGAGCTTCTaGACAGCCCAAGGCATGGGC +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLSLLSF*TAQGMG
Trigger: GCCCATGCCTTGGGCTGTCCAGAAGCTCAGGAGTGA...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CAA 90 bp GGCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCTGGTGCCA +
Preference number: 2 (lower is better)
Translates to: GLQTHTTALFTSTPL*LCEALMGYSATLVP
Trigger: TGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CAA 90 bp CAGGGCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCTGGTG +
Preference number: 2 (lower is better)
Translates to: QGLQTHTTALFTSTP*LLCEALMGYSATLV
Trigger: CACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CAA 90 bp AGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATC +
Preference number: 2 (lower is better)
Translates to: RRGFPAGSGLRTIFL*AKGGSLPATVERQI
Trigger: GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTGCCGATGGCTTCTGTTaGGAATGTGAACAGTGGAGC +
Preference number: 2 (lower is better)
Translates to: LPATVERQIPLASPVRMLADGFC*ECEQWS
Trigger: GCTCCACTGTTCACATTCTCAACAGAAGCCATCGGC...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGGCAGGCCCTGAAGATTaGCAACAACTGCAGATGGGG +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLAGPED*QQLQMG
Trigger: CCCCATCTGCAGTTGTTGTCAATCTTCAGGGCCTGC...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCGGGCTGCGGGTTCAGTaGGTCGTTTTGCCCCCGGAA +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVGLRVQ*VVLPPE
Trigger: TTCCGGGGGCAAAACGACTCACTGAACCCGCAGCCC...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTACCTGGGCAGGACAATaGCACACAGACAGCTCCGTG +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQITWAGQ*HTDSSV
Trigger: CACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGGT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCATCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 2 (lower is better)
Translates to: DASVPMGSSVGMSLRTGASHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGTTTCCCCCTTTAACCTaGTGCTGGCCCACACCCTCT +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLFPPLT*CWPTPS
Trigger: AGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGGAAA...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGTTCGTCTTTTCTCAGTaGTTTCCTAACGCGTGCCCC +
Preference number: 2 (lower is better)
Translates to: SLPATVERQIPLASPVRMFVFSQ*FPNACP
Trigger: GGGGCACGCGTTAGGAAACCACTGAGAAAAGACGAA...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVDQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACGACAACAACTGCAGATaGGGCGATGAACAGATGTGT +
Preference number: 2 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDDNNCR*GDEQMC
Trigger: ACACATCTGTTCATCGCCCCATCTGCAGTTGTTGTC...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTGACAACAACTGCAGATaGGGCGATGAACAGATGTGT +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPDNNCR*GDEQMC
Trigger: ACACATCTGTTCATCGCCCCATCTGCAGTTGTTGTC...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCGAGTGTGCGCAAAGCTaGGCTGTGCCCAGCCCCTTC +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVECAQS*AVPSPF
Trigger: GAAGGGGCTGGGCACAGCCCAGCTTTGCGCACACTC...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCACTGCAGATGGGGCGATaGACAGATGTGTGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: DASVPMGSSVGMSLRTGALQMGR*TDVWEA
Trigger: TGCTTCCCACACATCTGTTCATCGCCCCATCTGCAG...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp TCTGCGAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTGGTTTCCTAACGCGTaGCCCGTGGGGCTCCGGAAA +
Preference number: 2 (lower is better)
Translates to: SAKHSWDTQQRWCHFRLFWFPNA*PVGLRK
Trigger: TTTCCGGAGCCCCACGGGGCACGCGTTAGGAAACCA...GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 2 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 2 (lower is better)
Translates to: SLPATVERQIPLASPVRMTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTACGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 2 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLRLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCACTCTGGCTTCGCCAGTaGGCATGCTTTAGACAGCAG +
Preference number: 2 (lower is better)
Translates to: DASVPMGSSVGMSLRTGALWLRQ*ACFRQQ
Trigger: CTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAG...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTTTCAGTGAGTCGTTTTaGCCCCGGAAGGCCAGACAC +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIFSESF*PRKARH
Trigger: GTGTCTGGCCTTCCGGGGGCAAAACGACTCACTGAA...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCCTGGCTCACACAGATaGATCAGTTCCTATGGGGTC +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLPGSHR*ISSYGV
Trigger: GACCCCATAGGAACTGATGCATCTGTGTGAGCCAGG...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 2 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTTTGAAAGGAAGACCCTaGAAGAACAACACCTCCTTC +
Preference number: 2 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPLKGRP*KNNTSF
Trigger: GAAGGAGGTGTTGTTCTTCCAGGGTCTTCCTTTCAA...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCGTGGGTTTCCTGATGTaGCCCACAGGGAAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVVGFLM*PTGKAA
Trigger: GGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCAC...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACATGTGGGAAGCACCTTTaGAAGGGGACGTCTGTCTGC +
Preference number: 2 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTCGKHL*KGTSVC
Trigger: GCAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACA...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTTCCCATTTCATCCCTTaGTCCTCCAACCACGCTGGA +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQISHFIP*SSNHAG
Trigger: TCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGA...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 2 (lower is better)
Translates to: LPATVERQIPLASPVRMLTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCATCTGTCTGCTGGCTGTaGCGATGGCTTCTGTTGAGA +
Preference number: 2 (lower is better)
Translates to: DASVPMGSSVGMSLRTGASVCWL*RWLLLR
Trigger: TCTCAACAGAAGCCATCGGCACAGCCAGCAGACAGA...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTACGCACTCCTGTGTCTaGTCAGGAGGGGATTCTGCA +
Preference number: 2 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVTHSCV*SGGDSA
Trigger: TGCAGAATCCCCTCCTGAGCAGACACAGGAGTGCGT...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTCTAACGCGTGCCCCGTaGGGCTCCGGAAATGCTAGA +
Preference number: 2 (lower is better)
Translates to: EALMGYSATLVPFSSFLSLTRAP*GSGNAR
Trigger: TCTAGCATTTCCGGAGCCCCACGGGGCACGCGTTAG...ACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 2 (lower is better)
Translates to: SLPATVERQIPLASPVRMDTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCACTCACAGCCCTCCATaGCAGGCAGTCAGGAGCCTA +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVTHSPP*QAVRSL
Trigger: TAGGCTCCTGACTGCCTGCCATGGAGGGCTGTGAGT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCAGAGAAGGTGCCCTCTaGTCACTCCTGAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVREGAL*SLLSFW
Trigger: CCAGAAGCTCAGGAGTGATCAGAGGGCACCTTCTCT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTTCTTAGGAACACCTaGAACCTCTGGGAGATCCTA +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLLLRNT*NLWEIL
Trigger: TAGGATCTCCCAGAGGTTTCAGGTGTTCCTAAGAAG...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 2 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHSAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTACTTGCCCAGTGGCCCTaGGCTGCGGGTTCAGTGAGT +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLLAQWP*AAGSVS
Trigger: ACTCACTGAACCCGCAGCCCAGGGCCACTGGGCAAG...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCTCTGTCTGCTGGCTGTaGCGATGGCTTCTGTTGAGA +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVSVCWL*RWLLLR
Trigger: TCTCAACAGAAGCCATCGGCACAGCCAGCAGACAGA...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATTAGGGCTAGGGTCCTaGCCAGGGGTCTGCTTAGGG +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLLGLGS*PGVCLG
Trigger: CCCTAAGCAGACCCCTGGGCAGGACCCTAGCCCTAA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAGCACAGGGTGGTGTGTaGTTAGGGCTAGGGTCCTGC +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLAQGGV*LGLGSC
Trigger: GCAGGACCCTAGCCCTAAGCACACACCACCCTGTGC...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTCTAGTGGGTCTCCCTTaGTGTGCCGTATACTTGTTT +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQILVGLP*CAVYLF
Trigger: AAACAAGTATACGGCACAGCAAGGGAGACCCACTAG...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTGACAACAACTGCAGATaGGGCGATGAACAGATGTGT +
Preference number: 2 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIDNNCR*GDEQMC
Trigger: ACACATCTGTTCATCGCCCCATCTGCAGTTGTTGTC...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCCGGGGTAGGGTAAAATaGGGAGATGATGGAGGACTC +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVRGRVK*GDDGGL
Trigger: GAGTCCTCCATCATCTCCCCATTTTACCCTACCCCG...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAGGGCCTGTGAGGCAATaGAGTCCTGGACAAGCTCAG +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLGPVRQ*SPGQAQ
Trigger: CTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCC...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCAGTTGGGGTCAACTGTaGGACGGCTGGAAAAGATCT +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVSWGQL*DGWKRS
Trigger: AGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACTTCGTCTTTTCTCAGTaGTTTCCTAACGCGTGCCCC +
Preference number: 2 (lower is better)
Translates to: VHVYSFVALRSTHGILSNFVFSQ*FPNACP
Trigger: GGGGCACGCGTTAGGAAACCACTGAGAAAAGACGAA...GTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CAA 90 bp AGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTaGCTAAGAAGGCAGATTTCAGGATATTCACATTCATGCATTACG +
Preference number: 2 (lower is better)
Translates to: RTPRSNCPLSSTRGT*LRRQISGYSHSCIT
Trigger: CGTAATGCATGAATGTGAATATCCTGAAATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAAGAGAAGGTGCCCTCTaGTCACTCCTGAGCTTCTGG +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLREGAL*SLLSFW
Trigger: CCAGAAGCTCAGGAGTGATCAGAGGGCACCTTCTCT...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 2 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHDTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATTTTCCGGCAGGGAGTaGGCTCCGGACCATCTTTCT +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLFSGRE*APDHLS
Trigger: AGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAAA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAATCCTCCAACCACGCTaGAGGGCTCAGCGCTTCTAT +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLILQPR*RAQRFY
Trigger: ATAGAAGCGCTGAGCCCTCCAGCGTGGTTGGAGGAT...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR TCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCAGCGCTTCTATAGCATaGGACTGTGGAAACAGACAT +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVSASIA*DCGNRH
Trigger: ATGTCTGTTTCCACAGTCTCATGCTATAGAAGCGCT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 2 (lower is better)
Translates to: IFLLAKGGSLPATVERQITPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR GCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCAAGATTGACAACAACTaGAGATGGGGCGATGAACAG +
Preference number: 2 (lower is better)
Translates to: DGINLYICPLRELPGATVKIDNN*RWGDEQ
Trigger: CTGTTCATCGCCCCATCTGCAGTTGTTGTCAATCTT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAGCACTTTCTCATGGTTaGAGCACAGGGTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLALSHG*STGWCV
Trigger: CACACACCACCCTGTGCTGCAACCATGAGAAAGTGC...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAAAGAAAACCCCTTTATaGGAGGGTATGCCCTGGGCC +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLKKTPL*EGMPWA
Trigger: GGCCCAGGGCATACCCTCCCATAAAGGGGTTTTCTT...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGTTGATTTTTGCTAACTaGGGTGAGAAGGGATTTTAC +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLLIFAN*GEKGFY
Trigger: GTAAAATCCCTTCTCACCCCAGTTAGCAAAAATCAA...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGGGATATTCACATTCATaGATTACGTATCTCACACTA +
Preference number: 2 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLGYSHS*ITYLTL
Trigger: TAGTGTGAGATACGTAATGCATGAATGTGAATATCC...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAGAGGCAATGAAGTCCTaGACAAGCTCAGGGTTAGCT +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLEAMKS*TSSGLA
Trigger: AGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTC...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAATCAGAGGAGCACACTaGAGGTTTAGGAGGCAAACC +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLIRGAH*RFRRQT
Trigger: GGTTTGCCTCCTAAACCTCCAGTGTGCTCCTCTGAT...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR GCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTACTAGTGGGTCTCCCTTaGTGTGCCGTATACTTGTTT +
Preference number: 2 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLLVGLP*CAVYLF
Trigger: AAACAAGTATACGGCACAGCAAGGGAGACCCACTAG...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 72 bp TGGGGACACTGCCCAGGTGCTGCGCCGGGCTCAGCCTaGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAG +
Preference number: 3 (lower is better)
Translates to: WGHCPGAAPGSA*CPSCLGPQADQ
Trigger: CTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCCCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR CCA 72 bp ACAGGTGCAGTGGCCTCTGCCCTTGCCCAGTGGCCCTaGGCTGCGGGTTCAGTGAGTCGTTTTGCCCCCGGA +
Preference number: 3 (lower is better)
Translates to: TGAVASALAQWP*AAGSVSRFAPG
Trigger: TCCGGGGGCAAAACGACTCACTGAACCCGCAGCCCAGGGCCACTGGGCAAGGGCAGAGGCCACTGCACCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR TCA 72 bp CTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGAAGACAATGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: LSLVSELPGPAG*PGASLGRQWFL
Trigger: GAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR CCA 72 bp AGCTGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: SCLGPQADQGQA*EDNGFSFGRLR
Trigger: CCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR GCA 72 bp GCAGCACAGGGTGGTGTGTGCTTAGGGCTAGGGTCCTaGCCAGGGGTCTGCTTAGGGCACAGCTTGGGGGTT +
Preference number: 3 (lower is better)
Translates to: AAQGGVCLGLGS*PGVCLGHSLGV
Trigger: AACCCCCAAGCTGTGCCCTAAGCAGACCCCTGGGCAGGACCCTAGCCCTAAGCACACACCACCCTGTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 72 bp TTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCTGCAGACTCACACCAC +
Preference number: 3 (lower is better)
Translates to: FPMSTSATKVSL*PAGPGPADSHH
Trigger: GTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR GCA 72 bp CACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGTTGTTCACGTCTACTC +
Preference number: 3 (lower is better)
Translates to: HQGVPLASGSRA*RLTPLRCSRLL
Trigger: GAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR GCA 72 bp GGTGTGTGCTTAGGGCTAGGGTCCTGCCCAGGGGTCTaGTTAGGGCACAGCTTGGGGGTTCAACAGGCACCA +
Preference number: 3 (lower is better)
Translates to: GVCLGLGSCPGV*LGHSLGVQQAP
Trigger: TGGTGCCTGTTGAACCCCCAAGCTGTGCCCTAAGCAGACCCCTGGGCAGGACCCTAGCCCTAAGCACACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 72 bp TCTGGCTTCGCCAGTGCGCATGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAGACACCAGACAGGGAG +
Preference number: 3 (lower is better)
Translates to: SGFASAHALDSS*GQSTDQTPDRE
Trigger: CTCCCTGTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR CCA 72 bp GTGGGGTCTGCTGGGTTTCCCCCTTTAACCTGCTGCTaGCCCACACCCTCTGGCCTATTTGTCAGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: VGSAGFPPLTCC*PTPSGLFVSWL
Trigger: GAGCCAGCTGACAAATAGGCCAGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGGAAACCCAGCAGACCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CAA 90 bp AGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 3 (lower is better)
Translates to: SATKVSLWPAGPGPADSHTSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...GTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR TCA 72 bp CTATTTGTCAGCTGGCTCCGCACCTCAAGAGCACTGTaGAGTACTGGCCAGGTCAGGAGCAGGGGGTGGCAC +
Preference number: 3 (lower is better)
Translates to: LFVSWLRTSRAL*STGQVRSRGWH
Trigger: GTGCCACCCCCTGCTCCTGACCTGGCCAGTACTTCACAGTGCTCTTGAGGTGCGGAGCCAGCTGACAAATAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 72 bp TGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTaGGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGA +
Preference number: 3 (lower is better)
Translates to: WPAGPGPADSHH*VVHVYSFVALR
Trigger: TCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CCA 72 bp GTTTCCCCCTTTAACCTGCTGCTGGCCCACACCCTCTaGCCTATTTGTCAGCTGGCTCCGCACCTCAAGAGC +
Preference number: 3 (lower is better)
Translates to: VSPFNLLLAHTL*PICQLAPHLKS
Trigger: GCTCTTGAGGTGCGGAGCCAGCTGACAAATAGGCCAGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CAA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 3 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQTSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR TCA 72 bp GGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTaGGAATGTGAACAGTGGAGCAGGCAGGCTTCCTGG +
Preference number: 3 (lower is better)
Translates to: GRLSAGCADGFC*ECEQWSRQASW
Trigger: CCAGGAAGCCTGCCTGCTCCACTGTTCACATTCTCAACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CAA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 3 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLTSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CAA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 3 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR TCA 72 bp AGGAGATGCAAAATCACCCTGTCTCCGTGGGTTTCCTaGTGTGGCCCACAGGGAAGGCTGCCACTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: RRCKITLSPWVS*CGPQGRLPLGR
Trigger: TCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACAGGGTGATTTTGCATCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR TCA 72 bp AATCCAGGCCTCCTAGGTTTAAGCCAAGGTAGGGAATaGTGGGACCAGGCGAGTGTGCGCAAAGCTGGGCTG +
Preference number: 3 (lower is better)
Translates to: NPGLLGLSQGRE*WDQASVRKAGL
Trigger: CAGCCCAGCTTTGCGCACACTCGCCTGGTCCCATCATTCCCTACCTTGGCTTAAACCTAGGAGGCCTGGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 72 bp CCAGCTGAGAGGGAATTTATGTGCAGACTAGAGCCCTaGATGCGTCAGCGGCTCAGGGAAGAGGATACAGGC +
Preference number: 3 (lower is better)
Translates to: PAEREFMCRLEP*MRQRLREEDTG
Trigger: GCCTGTATCCTCTTCCCTGAGCCGCTGACGCATCCAGGGCTCTAGTCTGCACATAAATTCCCTCTCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CAA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 3 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR-3UTR CAA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCAGGGAAGGCTGCCACTaGGGAGACAGGCCAACAGGG +
Preference number: 3 (lower is better)
Translates to: DGINLYICPLRELPGATVREGCH*GDRPTG
Trigger: CCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCCT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR TCA 72 bp AGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTaGGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGC +
Preference number: 3 (lower is better)
Translates to: RQWFLLREAQGL*GNEVLDKLRVS
Trigger: GCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
3UTR GCA 72 bp GGAGGGAGAAGGCAGGCCCTGAAGATTGACAACAACTaGAGATGGGGCGATGAACAGATGTGTGGGAAGCAC +
Preference number: 3 (lower is better)
Translates to: GGRRQALKIDNN*RWGDEQMCGKH
Trigger: GTGCTTCCCACACATCTGTTCATCGCCCCATCTGCAGTTGTTGTCAATCTTCAGGGCCTGCCTTCTCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 72 bp CCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTaGAGGGCTCAGCGCTTCTATAGCATGAGACTGTGG +
Preference number: 3 (lower is better)
Translates to: PVPFHPLILQPR*RAQRFYSMRLW
Trigger: CCACAGTCTCATGCTATAGAAGCGCTGAGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 72 bp AGGGATTTTACAAGCCCAGCTGAGAGGGAATTTATGTaGAGACTAGAGCCCTGGATGCGTCAGCGGCTCAGG +
Preference number: 3 (lower is better)
Translates to: RDFTSPAEREFM*RLEPWMRQRLR
Trigger: CCTGAGCCGCTGACGCATCCAGGGCTCTAGTCTGCACATAAATTCCCTCTCAGCTGGGCTTGTAAAATCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CAA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 3 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIRTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR GCA 72 bp ACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATACTCAGCAACGCTGGTG +
Preference number: 3 (lower is better)
Translates to: TTALFTSTPLLL*EALMGYSATLV
Trigger: CACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR GCA 72 bp CTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGGGATACTCAGCAACGC +
Preference number: 3 (lower is better)
Translates to: LTPLRCSRLLLC*SAKHSWDTQQR
Trigger: GCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR GCA 72 bp CCAGGTCTTAGAGGGCTCGACAGTGGAACCATTCAATaGATTGGGCTCCTTCTGAGCACATATGTAGGGGTG +
Preference number: 3 (lower is better)
Translates to: PGLRGLDSGTIQ*IGLLLSTYVGV
Trigger: CACCCCTACATATGTGCTCAGAAGGAGCCCAATGCATTGAATGGTTCCACTGTCGAGCCCTCTAAGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 72 bp AATGACACACAGACAGCTCCGTGGGCACTAGGACTCTaGGACAATGGGCTTTTTAAGGTTCGGCCCAAATGG +
Preference number: 3 (lower is better)
Translates to: NDTQTAPWALGL*DNGLFKVRPKW
Trigger: CCATTTGGGCCGAACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CAA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGAAGTGCATTTCATTCTaGACCTCAGGGCTCGGACTA +
Preference number: 3 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLKCISF*TSGLGL
Trigger: TAGTCCGAGCCCTGAGGTCAAGAATGAAATGCACTT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CAA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCAGTACACGCGGCACGTaGCTAAGAAGGCAGATTTCA +
Preference number: 3 (lower is better)
Translates to: DGINLYICPLRELPGATVSTRGT*LRRQIS
Trigger: TGAAATCTGCCTTCTTAGCAACGTGCCGCGTGTACT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR TCA 72 bp GTGGATAAGACGGCATCAACTTGTACATTTGCCCATTaGGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: VDKTASTCTFAH*ENSQEQLSSLQ
Trigger: CTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTCTTATCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 72 bp TCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGGTGCCATTTTCGTCTT +
Preference number: 3 (lower is better)
Translates to: SRLLLCCSAKHS*DTQQRWCHFRL
Trigger: AAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CCA 72 bp ATGAGACTGTGGAAACAGACATTGAAAGGAAGACCCTaGAAGAACAACACCTCCTTCTTGGCGACTGGGGCT +
Preference number: 3 (lower is better)
Translates to: MRLWKQTLKGRP*KNNTSFLATGA
Trigger: AGCCCCAGTCGCCAAGAAGGAGGTGTTGTTCTTCCAGGGTCTTCCTTTCAATGTCTGTTTCCACAGTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR-3UTR CAA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAAGGCCCACAGTGGATTaGGCACAAGTAGTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLRPTVD*AQVVAS
Trigger: AGAGGCCACTACTTGTGCCAAATCCACTGTGGGCCT...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CCA 72 bp AAAAGTCTCAGCAGGAAACCAACCTTAATGGCTTGTTaGTGGATAAGACGGCATCAACTTGTACATTTGCCC +
Preference number: 3 (lower is better)
Translates to: KSLSRKPTLMAC*WIRRHQLVHLP
Trigger: GGGCAAATGTACAAGTTGATGCCGTCTTATCCACCAACAAGCCATTAAGGTTGGTTTCCTGCTGAGACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGAWCPS*LGPQAD
Trigger: GTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGC...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGCCAGCCCCTTCAGGCTaGCCACCACTCCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGPAPSG*PPLHGP
Trigger: GGGACCATGGAGTGGTGGGCAGCCTGAAGGGGCTGG...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGGGACACCCCCAGTGCTaGCGGTCTCGCTTCCGGTAC +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGGHPQC*RSRFRY
Trigger: GTACCGGAAGCGAGACCGGCAGCACTGGGGGTGTCC...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
73% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGTKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGTATGGACACCCCCAGTaGTGCCGGTCTCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGYGHPQ*CRSRFR
Trigger: CCGGAAGCGAGACCGGCAGCACTGGGGGTGTCCATA...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGGGTAGAGTTGGGAGCTaGGGCGGAGAGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGGRVGS*GGEESG
Trigger: CCCAGACTCCTCTCCGCCCCAGCTCCCAACTCTACC...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGCTCAGGAGGGGATTCTaGAGGCTGGACTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGLRRGF*RLDSQP
Trigger: GGGCTGTGAGTCCAGCCTGCAGAATCCCCTCCTGAG...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGCTGCAGATGGGGCGATaGACAGATGTGTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGLQMGR*TDVWEA
Trigger: TGCTTCCCACACATCTGTTCATCGCCCCATCTGCAG...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGGCAGGCCCTGAAGATTaGCAACAACTGCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGAGPED*QQLQMG
Trigger: CCCCATCTGCAGTTGTTGTCAATCTTCAGGGCCTGC...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGAAAGACAGATCCCTCTaGCTTCGCCAGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGKDRSL*LRQCAC
Trigger: GCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTT...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGCGGCGCCCGCTCCTaGGGCGAACTTGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGSGARS*GELAWR
Trigger: CCGCCAGGCAAGTTCGCCCCAGGAGCGGGCGCCGCT...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393140.6
ENST00000629961.2
CDS-3UTR CCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGGGACAGCCCAAGGCATaGGCACTTTCTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGGQPKA*ALSHGC
Trigger: GCAACCATGAGAAAGTGCCCATGCCTTGGGCTGTCC...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
69% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPAPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSAWCPS*LGPQAD
Trigger: GTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGC...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGTACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: GVPLASGSRACRLTPLRCTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...ACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGTAAGCCCCAGAGCGGGTaGAGCGCGCAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GVPLASGSRACRLTPLRCKPQSG*SAQCSS
Trigger: GCTGCTGCACTGCGCGCTCCACCCGCTCTGGGGCTT...ACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCGGAGGGGGCCGGCACTaGCAGACGTGTCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSGGGRH*QTCRQL
Trigger: CAGCTGCCGACACGTCTGCCAGTGCCGGCCCCCTCC...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGGAGGGGGCCGGCACTaGCAGACGTGTCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGGGGRH*QTCRQL
Trigger: CAGCTGCCGACACGTCTGCCAGTGCCGGCCCCCTCC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGSAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGCGCCGGGCTCAGCCTaGTGTCCGAGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPAPGSA*CPSCLG
Trigger: GCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTGCGCCGGGCTCAGCCTaGTGTCCGAGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGAPGSA*CPSCLG
Trigger: GCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTTGGGGCGAACTTGCCTaGCGGCGGCCCCAGCCGACC +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGWGELA*RRPQPT
Trigger: GGTCGGCTGGGGCCGCCGCCAGGCAAGTTCGCCCCA...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393140.6
ENST00000629961.2
CDS-3UTR TCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGGGTGGAGCGCGCAGTaGAGCAGCAGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGGWSAQ*SSSEDQ
Trigger: CTGGTCCTCGCTGCTGCTGCACTGCGCGCTCCACCC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFAWCPS*LGPQAD
Trigger: GTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGC...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPAGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCGGTAGAGTTGGGAGCTaGGGCGGAGAGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VPPRCPSGQRVQGLQTHTGRVGS*GGEESG
Trigger: CCCAGACTCCTCTCCGCCCCAGCTCCCAACTCTACC...GGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp GGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGTACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: GVPLASGSRACRLTPLRCTKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...ACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPAGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGTGGGGCGAACTTGCCTaGCGGCGGCCCCAGCCGACC +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRWGELA*RRPQPT
Trigger: GGTCGGCTGGGGCCGCCGCCAGGCAAGTTCGCCCCA...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393140.6
ENST00000629961.2
CDS-3UTR TCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGTGGAGCGCGCAGTaGAGCAGCAGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSGWSAQ*SSSEDQ
Trigger: CTGGTCCTCGCTGCTGCTGCACTGCGCGCTCCACCC...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLAWCPS*LGPQAD
Trigger: GTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGC...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGAAGCCCCAGAGCGGGTaGAGCGCGCAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPAKPQSG*SAQCSS
Trigger: GCTGCTGCACTGCGCGCTCCACCCGCTCTGGGGCTT...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAAGAAGAGGCATTTCCACCCTGGTCCAGGCAGAGATGGCCACAGAGGGCTCGCGCCGGGCTCAGCCTaGTGTCCGAGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TKKRHFHPGPGRDGHRGLAPGSA*CPSCLG
Trigger: GCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC...GAGCCCTCTGTGGCCATCTCTGCCTGGACCAGGGTGGAAATGCCTCTTCTTGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACGCGCCGGGCTCAGCCTaGTGTCCGAGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDAPGSA*CPSCLG
Trigger: GCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGCCTCAGGGGACTGTaGGGGACATCCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPGLRGL*GTSSAW
Trigger: CCAGGCGCTGGATGTCCCCCACAGTCCCCTGAGGCC...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTACCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGGGCTGCGGGTTCAGTaGGTCGTTTTGCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGGLRVQ*VVLPPE
Trigger: TTCCGGGGGCAAAACGACTCACTGAACCCGCAGCCC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGGCTGCGGGTTCAGTaGGTCGTTTTGCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQGLRVQ*VVLPPE
Trigger: TTCCGGGGGCAAAACGACTCACTGAACCCGCAGCCC...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGAGCGCTTCTATAGCATaGGACTGTGGAAACAGACAT +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGSASIA*DCGNRH
Trigger: ATGTCTGTTTCCACAGTCTCATGCTATAGAAGCGCT...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTGGGTGGAGCGCGCAGTaGAGCAGCAGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPGWSAQ*SSSEDQ
Trigger: CTGGTCCTCGCTGCTGCTGCACTGCGCGCTCCACCC...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACTTCTGGGGCTCACCATaGGTCACCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: SATKVSLWPAGPGPADSHFWGSP*VTCTKP
Trigger: GGGCTTCGTGCAGGTGACGCATGGTGAGCCCCAGAA...GTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp AAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: KVSLWPAGPGPADSHHCVSGSRA*RLTPLR
Trigger: ACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCT...AACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPAWCPS*LGPQAD
Trigger: GTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGC...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGCCTGGTGTCCGAGCTaGCTGGGCCCGCAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMAWCPS*LGPQAD
Trigger: GTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGC...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGACCAGGCGAGTGTaGGCAAAGCTGGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFGTRRV*AKLGCA
Trigger: GGCACAGCCCAGCTTTGCGCACACTCGCCTGGTCCC...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTAAGCCCCAGAGCGGGTaGAGCGCGCAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPKPQSG*SAQCSS
Trigger: GCTGCTGCACTGCGCGCTCCACCCGCTCTGGGGCTT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGGTAGAGTTGGGAGCTaGGGCGGAGAGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGGRVGS*GGEESG
Trigger: CCCAGACTCCTCTCCGCCCCAGCTCCCAACTCTACC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCGGTAGAGTTGGGAGCTaGGGCGGAGAGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSGRVGS*GGEESG
Trigger: CCCAGACTCCTCTCCGCCCCAGCTCCCAACTCTACC...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPTKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPATKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTGCGCCGGGCTCAGCCTaGTGTCCGAGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLAPGSA*CPSCLG
Trigger: GCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGGCCTCAGGGGACTGTaGGGGACATCCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPGLRGL*GTSSAW
Trigger: CCAGGCGCTGGATGTCCCCCACAGTCCCCTGAGGCC...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCACAGGGGTCACCAGCCTaGAGGACCCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPQGSPA*RTPLLL
Trigger: CAGGAGGAGAGGGGTCCTCCAGGCTGGTGACCCCTG...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGAGTGTGCGCAAAGCTaGGCTGTGCCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGECAQS*AVPSPF
Trigger: GAAGGGGCTGGGCACAGCCCAGCTTTGCGCACACTC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACGGGCCTGTGAGGCAATaGAGTCCTGGACAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SATKVSLWPAGPGPADSHGPVRQ*SPGQAQ
Trigger: CTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCC...GTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR TCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTGGGTGGAGCGCGCAGTaGAGCAGCAGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAGWSAQ*SSSEDQ
Trigger: CTGGTCCTCGCTGCTGCTGCACTGCGCGCTCCACCC...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCATCACCATGCGTCACCTaGACGAAGCCCCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPSPCVT*TKPQSG
Trigger: CCCGCTCTGGGGCTTCGTGCAGGTGACGCATGGTGA...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGTCACCATGCGTCACCTaGACGAAGCCCCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPASPCVT*TKPQSG
Trigger: CCCGCTCTGGGGCTTCGTGCAGGTGACGCATGGTGA...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGTCACCATGCGTCACCTaGACGAAGCCCCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSSPCVT*TKPQSG
Trigger: CCCGCTCTGGGGCTTCGTGCAGGTGACGCATGGTGA...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTTTCTGGGGCTCACCATaGGTCACCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KVSLWPAGPGPADSHHCVFWGSP*VTCTKP
Trigger: GGGCTTCGTGCAGGTGACGCATGGTGAGCCCCAGAA...AACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGACCCAGCCTGGCTCTaGAGCTCTGTGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGDPAWL*SSVSQL
Trigger: CAGCTGACTCACAGAGCTGCAGAGCCAGGCTGGGTC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGSGSRA*RLTPLR
Trigger: ACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCT...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTAGGGCTAGGGTCCTaGCCAGGGGTCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSLGLGS*PGVCLG
Trigger: CCCTAAGCAGACCCCTGGGCAGGACCCTAGCCCTAA...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGTTAGGGCTAGGGTCCTaGCCAGGGGTCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQLGLGS*PGVCLG
Trigger: CCCTAAGCAGACCCCTGGGCAGGACCCTAGCCCTAA...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGGGGACCAGGCGAGTGTaGGCAAAGCTGGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRGTRRV*AKLGCA
Trigger: GGCACAGCCCAGCTTTGCGCACACTCGCCTGGTCCC...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTTATGGACACCCCCAGTaGTGCCGGTCTCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLYGHPQ*CRSRFR
Trigger: CCGGAAGCGAGACCGGCAGCACTGGGGGTGTCCATA...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGGAGGGGGCCGGCACTaGCAGACGTGTCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLGGGRH*QTCRQL
Trigger: CAGCTGCCGACACGTCTGCCAGTGCCGGCCCCCTCC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGTAGAGTTGGGAGCTaGGGCGGAGAGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPGRVGS*GGEESG
Trigger: CCCAGACTCCTCTCCGCCCCAGCTCCCAACTCTACC...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGCTAACGCGTGCCCCGTaGGGCTCCGGAAATGCTAGA +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQLTRAP*GSGNAR
Trigger: TCTAGCATTTCCGGAGCCCCACGGGGCACGCGTTAG...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGGAAGGCTGCCACTTaGGAGACAGGCCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPAGKAAT*ETGQQG
Trigger: GCCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCC...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGTGGGAGGGTATGCCCTaGGCCTGTCCTCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSWEGMP*ACPQPT
Trigger: TGTGGGCTGAGGACAGGCCCAGGGCATACCCTCCCA...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCGTCAGGAGCAGGGGGTaGCACTATGCTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSVRSRG*HYADAQ
Trigger: CTGGGCATCAGCATAGTGCCACCCCCTGCTCCTGAC...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGACCTTAATGGCTTGTTaGTGGATAAGACGGCATCAA +
Preference number: 4 (lower is better)
Translates to: APGSAWCPSCLGPQADQGTLMAC*WIRRHQ
Trigger: TTGATGCCGTCTTATCCACCAACAAGCCATTAAGGT...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGAGGCTCAGGGCCTGTaGGGCAATGAAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSEAQGL*GNEVLD
Trigger: GTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTC...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTTTCTGGGGCTCACCATaGGTCACCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLFWGSP*VTCTKP
Trigger: GGGCTTCGTGCAGGTGACGCATGGTGAGCCCCAGAA...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLSGSRA*RLTPLR
Trigger: ACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCT...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCCCGTGGGGCTCCGGAAATGCTAGAGAGAGTTGTTAGGACCCAGCCTGGCTCTAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: PRGAPEMLERVVRTQPGSSGSRA*RLTPLR
Trigger: ACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCT...AGAGCCAGGCTGGGTCCTAACAACTCTCTCTAGCATTTCCGGAGCCCCACGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPSGSRA*RLTPLR
Trigger: ACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLTLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGLRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGCTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQLRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCCTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSLRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAAGGGGACGTCTGTCTaGTGGCTGTGCCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGKGTSV*WLCRWL
Trigger: AAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTT...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACTCCTGCCCAGGGGTCTaGTTAGGGCACAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDSCPGV*LGHSLG
Trigger: CCCCAAGCTGTGCCCTAAGCAGACCCCTGGGCAGGA...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACTCCTGCCCAGGGGTCTaGTTAGGGCACAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDSCPGV*LGHSLG
Trigger: CCCCAAGCTGTGCCCTAAGCAGACCCCTGGGCAGGA...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTGCACAGGGTGGTGTGTaGTTAGGGCTAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGAQGGV*LGLGSC
Trigger: GCAGGACCCTAGCCCTAAGCACACACCACCCTGTGC...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTCCAGCCCCTTCAGGCTaGCCACCACTCCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAPAPSG*PPLHGP
Trigger: GGGACCATGGAGTGGTGGGCAGCCTGAAGGGGCTGG...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTGGACACCCCCAGTGCTaGCGGTCTCGCTTCCGGTAC +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAGHPQC*RSRFRY
Trigger: GTACCGGAAGCGAGACCGGCAGCACTGGGGGTGTCC...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTAAGCCCCAGAGCGGGTaGAGCGCGCAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLKPQSG*SAQCSS
Trigger: GCTGCTGCACTGCGCGCTCCACCCGCTCTGGGGCTT...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGGGAGGGGGCCGGCACTaGCAGACGTGTCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ACRLTPLRCSRLLLCCSAGGGRH*QTCRQL
Trigger: CAGCTGCCGACACGTCTGCCAGTGCCGGCCCCCTCC...CGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGGTAGAGTTGGGAGCTaGGGCGGAGAGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPGRVGS*GGEESG
Trigger: CCCAGACTCCTCTCCGCCCCAGCTCCCAACTCTACC...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGCTAACGCGTGCCCCGTaGGGCTCCGGAAATGCTAGA +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPALTRAP*GSGNAR
Trigger: TCTAGCATTTCCGGAGCCCCACGGGGCACGCGTTAG...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp GTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: VPPRCPSGQRVQGLQTHTSAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...GGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRATKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTACCAAGGTGTCCCTCTaGCCAGCGGGTCCAGGGCCT +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHATKVSL*PAGPGP
Trigger: AGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTGCGCCGGGCTCAGCCTaGTGTCCGAGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIAPGSA*CPSCLG
Trigger: GCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: KVSLWPAGPGPADSHHCVALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...AACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTAGCGGCGCCCGCTCCTaGGGCGAACTTGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQISGARS*GELAWR
Trigger: CCGCCAGGCAAGTTCGCCCCAGGAGCGGGCGCCGCT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393140.6
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACCTTGCCCAGTGGCCCTaGGCTGCGGGTTCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDLAQWP*AAGSVS
Trigger: ACTCACTGAACCCGCAGCCCAGGGCCACTGGGCAAG...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACCTTGCCCAGTGGCCCTaGGCTGCGGGTTCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDLAQWP*AAGSVS
Trigger: ACTCACTGAACCCGCAGCCCAGGGCCACTGGGCAAG...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTTCTGCCCTTGCCCAGTaGCCCTGGGCTGCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRASALAQ*PWAAGS
Trigger: TGAACCCGCAGCCCAGGGCCACTGGGCAAGGGCAGA...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGGCCTCAGGGGACTGTaGGGGACATCCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLGLRGL*GTSSAW
Trigger: CCAGGCGCTGGATGTCCCCCACAGTCCCCTGAGGCC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGCAGGGGTCACCAGCCTaGAGGACCCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILQGSPA*RTPLLL
Trigger: CAGGAGGAGAGGGGTCCTCCAGGCTGGTGACCCCTG...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGGGAAGGCTGCCACTTaGGAGACAGGCCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPGKAAT*ETGQQG
Trigger: GCCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCC...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGACACAGACAGCTCCGTaGGCACTAGGACTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQTQTAP*ALGLWD
Trigger: GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCTGGGAGGGTATGCCCTaGGCCTGTCCTCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLWEGMP*ACPQPT
Trigger: TGTGGGCTGAGGACAGGCCCAGGGCATACCCTCCCA...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGAGCACTGTGAAGTACTaGCCAGGTCAGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQSTVKY*PGQEQG
Trigger: CCCCTGCTCCTGACCTGGCCAGTACTTCACAGTGCT...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCTGGCCCACACCCTCTaGCCTATTTGTCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGLAHTL*PICQLA
Trigger: AGCCAGCTGACAAATAGGCCAGAGGGTGTGGGCCAG...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCCTGCCCACCACTCCATaGTCCCTTAGCCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSLPTTP*SLSQEP
Trigger: AGGTTCCTGGCTAAGGGACCATGGAGTGGTGGGCAG...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTCCAGGGAGCCTCGCCTaGGGCTGGAAGATTAGGCTA +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLPGSLA*GWKIRL
Trigger: TAGCCTAATCTTCCAGCCCCAGGCGAGGCTCCCTGG...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCCCAGGGAGCCTCGCCTaGGGCTGGAAGATTAGGCTA +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFPGSLA*GWKIRL
Trigger: TAGCCTAATCTTCCAGCCCCAGGCGAGGCTCCCTGG...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCCTGTGAGGCAATaGAGTCCTGGACAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFGPVRQ*SPGQAQ
Trigger: CTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCC...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACACCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCACCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: LTPLRCSRLLLCCSAKHSPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...TGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR TCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGGGGCTGCGGGTTCAGTaGGTCGTTTTGCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILGLRVQ*VVLPPE
Trigger: TTCCGGGGGCAAAACGACTCACTGAACCCGCAGCCC...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTCTCTGGGAGAGGGCCTaGGTACAACAGTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPLWERA*VQQSGL
Trigger: GAGGCCTGACTGTTGTACTCAGGCCCTCTCCCAGAG...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAACCTGGGCAGGACAATaGCACACAGACAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPTWAGQ*HTDSSV
Trigger: CACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGGT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGACCTCAAGAGCACTGTaGAGTACTGGCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQTSRAL*STGQVR
Trigger: CCTGACCTGGCCAGTACTTCACAGTGCTCTTGAGGT...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCTTCTGGGGCTCACCATaGGTCACCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLFWGSP*VTCTKP
Trigger: GGGCTTCGTGCAGGTGACGCATGGTGAGCCCCAGAA...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTTTCTGGGGCTCACCATaGGTCACCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPFWGSP*VTCTKP
Trigger: GGGCTTCGTGCAGGTGACGCATGGTGAGCCCCAGAA...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGTGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: GVPLASGSRACRLTPLRCADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...ACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHASGSRA*RLTPLR
Trigger: ACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGTCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPASHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGCTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPALRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCTCTGGCTTCGCCAGTaGGCATGCTTTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGLWLRQ*ACFRQQ
Trigger: CTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAG...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGCTCTGGCTTCGCCAGTaGGCATGCTTTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQLWLRQ*ACFRQQ
Trigger: CTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAG...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCCTCAGGAGGGGATTCTaGAGGCTGGACTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLLRRGF*RLDSQP
Trigger: GGGCTGTGAGTCCAGCCTGCAGAATCCCCTCCTGAG...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGCCCCCTTTAACCTGCTaGTGGCCCACACCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILPPLTC*WPTPSG
Trigger: GCCAGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGG...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACCCCCCTTTAACCTGCTaGTGGCCCACACCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDPPLTC*WPTPSG
Trigger: GCCAGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGG...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGTTTCCCCCTTTAACCTaGTGCTGGCCCACACCCTCT +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQFPPLT*CWPTPS
Trigger: AGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGGAAA...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTTTAGGGCTAGGGTCCTaGCCAGGGGTCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPLGLGS*PGVCLG
Trigger: CCCTAAGCAGACCCCTGGGCAGGACCCTAGCCCTAA...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACGCACAGGGTGGTGTGTaGTTAGGGCTAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDAQGGV*LGLGSC
Trigger: GCAGGACCCTAGCCCTAAGCACACACCACCCTGTGC...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCCCAGCCCCTTCAGGCTaGCCACCACTCCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAPAPSG*PPLHGP
Trigger: GGGACCATGGAGTGGTGGGCAGCCTGAAGGGGCTGG...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGACACCCCCAGTGCTaGCGGTCTCGCTTCCGGTAC +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHGHPQC*RSRFRY
Trigger: GTACCGGAAGCGAGACCGGCAGCACTGGGGGTGTCC...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGTATGGACACCCCCAGTaGTGCCGGTCTCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMYGHPQ*CRSRFR
Trigger: CCGGAAGCGAGACCGGCAGCACTGGGGGTGTCCATA...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGAAGCCCCAGAGCGGGTaGAGCGCGCAGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLKPQSG*SAQCSS
Trigger: GCTGCTGCACTGCGCGCTCCACCCGCTCTGGGGCTT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGDQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQDQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTAAAGACAGATCCCTCTaGCTTCGCCAGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: KVSLWPAGPGPADSHHCVKDRSL*LRQCAC
Trigger: GCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTT...AACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCGGGACGTCTGTCTGCTaGCTGTGCCGATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLGTSVC*LCRWLL
Trigger: CAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCC...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACGGGACGTCTGTCTGCTaGCTGTGCCGATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDGTSVC*LCRWLL
Trigger: CAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCC...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTGCCCAGTGGCCCTaGGCTGCGGGTTCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMLAQWP*AAGSVS
Trigger: ACTCACTGAACCCGCAGCCCAGGGCCACTGGGCAAG...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGGGACATCCAGCGCCTaGCCAGCATCAGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPGTSSA*PASAWY
Trigger: GTACCAGGCTGATGCTGGCCAGGCGCTGGATGTCCC...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTGGGACATCCAGCGCCTaGCCAGCATCAGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAGTSSA*PASAWY
Trigger: GTACCAGGCTGATGCTGGCCAGGCGCTGGATGTCCC...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCCAGGGGTCACCAGCCTaGAGGACCCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAQGSPA*RTPLLL
Trigger: CAGGAGGAGAGGGGTCCTCCAGGCTGGTGACCCCTG...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCGTGGGTTTCCTGATGTaGCCCACAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLVGFLM*PTGKAA
Trigger: GGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCAC...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTGTGGGTTTCCTGATGTaGCCCACAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPVGFLM*PTGKAA
Trigger: GGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCAC...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGACACAGACAGCTCCGTaGGCACTAGGACTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPATQTAP*ALGLWD
Trigger: GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTATTTGTCAGCTaGCTCCGCACCTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQGLFVS*LRTSRA
Trigger: TGCTCTTGAGGTGCGGAGCCAGCTGACAAATAGGCC...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCGGCCTATTTGTCAGCTaGCTCCGCACCTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSGLFVS*LRTSRA
Trigger: TGCTCTTGAGGTGCGGAGCCAGCTGACAAATAGGCC...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGCTGGCCCACACCCTCTaGCCTATTTGTCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPALAHTL*PICQLA
Trigger: AGCCAGCTGACAAATAGGCCAGAGGGTGTGGGCCAG...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTTGCAGCACAGGGTaGTGTGTGCTTAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPAGCSTG*CVLRAR
Trigger: CCTAGCCCTAAGCACACACCACCCTGTGCTGCAACC...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGGACAGCCCAAGGCATaGGCACTTTCTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGGQPKA*ALSHGC
Trigger: GCAACCATGAGAAAGTGCCCATGCCTTGGGCTGTCC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTTCACTCCTGAGCTTCTaGACAGCCCAAGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLSLLSF*TAQGMG
Trigger: GCCCATGCCTTGGGCTGTCCAGAAGCTCAGGAGTGA...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACCCAGGGAGCCTCGCCTaGGGCTGGAAGATTAGGCTA +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDPGSLA*GWKIRL
Trigger: TAGCCTAATCTTCCAGCCCCAGGCGAGGCTCCCTGG...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTTGCAGACTAGAGCCCTaGATGCGTCAGCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPCRLEP*MRQRLR
Trigger: CCTGAGCCGCTGACGCATCCAGGGCTCTAGTCTGCA...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCTCATAAGTGGCATATaGACACCCCCAGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGLISGI*TPPVLP
Trigger: CGGCAGCACTGGGGGTGTCCATATGCCACTTATGAG...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGGAGGCTCAGGGCCTGTaGGGCAATGAAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILEAQGL*GNEVLD
Trigger: GTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTC...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCTGCGAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCCCTGGGCCCGCAGGCTaGCCAGGGGCAAGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SAKHSWDTQQRWCHFRLFPGPAG*PGASLG
Trigger: TCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGG...GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR TCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTTGTGGGAAGCACCTTTaGAAGGGGACGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGCGKHL*KGTSVC
Trigger: GCAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACA...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGCTGCAGATGGGGCGATaGACAGATGTGTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSLQMGR*TDVWEA
Trigger: TGCTTCCCACACATCTGTTCATCGCCCCATCTGCAG...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGCAGGCCCTGAAGATTaGCAACAACTGCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFAGPED*QQLQMG
Trigger: CCCCATCTGCAGTTGTTGTCAATCTTCAGGGCCTGC...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGGTAAAATGGGGAGATaGTGGAGGACTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGGKMGR*WRTLGE
Trigger: CTCTCCCAGAGTCCTCCATCATCTCCCCATTTTACC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGTAAAATGGGGAGATaGTGGAGGACTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQGKMGR*WRTLGE
Trigger: CTCTCCCAGAGTCCTCCATCATCTCCCCATTTTACC...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGCCCTCTGATCACTCCTaGGCTTCTGGACAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRPSDHS*ASGQPK
Trigger: CTTGGGCTGTCCAGAAGCTCAGGAGTGATCAGAGGG...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACCCCTCTGATCACTCCTaGGCTTCTGGACAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDPSDHS*ASGQPK
Trigger: CTTGGGCTGTCCAGAAGCTCAGGAGTGATCAGAGGG...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTAGCCAAGGTAGGGAATaGTGGGACCAGGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPSQGRE*WDQASV
Trigger: CACACTCGCCTGGTCCCATCATTCCCTACCTTGGCT...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACCAAGAAGAGGCATTTCCACCCTGGTCCAGGCAGAGATGGCCACAGAGGGCTCTTCTGGGGCTCACCATaGGTCACCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: TKKRHFHPGPGRDGHRGLFWGSP*VTCTKP
Trigger: GGGCTTCGTGCAGGTGACGCATGGTGAGCCCCAGAA...GAGCCCTCTGTGGCCATCTCTGCCTGGACCAGGGTGGAAATGCCTCTTCTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTGGTTTCCTAACGCGTaGCCCGTGGGGCTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAWFPNA*PVGLRK
Trigger: TTTCCGGAGCCCCACGGGGCACGCGTTAGGAAACCA...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCATGGTTTCCTAACGCGTaGCCCGTGGGGCTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPWFPNA*PVGLRK
Trigger: TTTCCGGAGCCCCACGGGGCACGCGTTAGGAAACCA...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTTCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPSHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGCTCTGGCTTCGCCAGTaGGCATGCTTTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSLWLRQ*ACFRQQ
Trigger: CTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAG...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTCTCAGGAGGGGATTCTaGAGGCTGGACTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHALRRGF*RLDSQP
Trigger: GGGCTGTGAGTCCAGCCTGCAGAATCCCCTCCTGAG...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTCCAGTGGCCCTGGGCTaGGGGTTCAGTGAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAPVALG*GFSESF
Trigger: AAACGACTCACTGAACCCGCAGCCCAGGGCCACTGG...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGCCAGTGGCCCTGGGCTaGGGGTTCAGTGAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILPVALG*GFSESF
Trigger: AAACGACTCACTGAACCCGCAGCCCAGGGCCACTGG...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTTTTCCCCCTTTAACCTaGTGCTGGCCCACACCCTCT +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLFPPLT*CWPTPS
Trigger: AGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGGAAA...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTGCACAGGGTGGTGTGTaGTTAGGGCTAGGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAAQGGV*LGLGSC
Trigger: GCAGGACCCTAGCCCTAAGCACACACCACCCTGTGC...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTGGGACCAGGCGAGTGTaGGCAAAGCTGGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVGTRRV*AKLGCA
Trigger: GGCACAGCCCAGCTTTGCGCACACTCGCCTGGTCCC...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGTTGGAGCAGGACTTCTaGGGCTCACCATGCGTCACC +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRLEQDF*GSPCVT
Trigger: GGTGACGCATGGTGAGCCCCAGAAGTCCTGCTCCAA...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCCGTGGGGCTCCGGAAATGCTAGAGAGAGTTGTTAGGACCCAGCCTGGCTCTTTGGAGCAGGACTTCTaGGGCTCACCATGCGTCACC +
Preference number: 4 (lower is better)
Translates to: PRGAPEMLERVVRTQPGSLEQDF*GSPCVT
Trigger: GGTGACGCATGGTGAGCCCCAGAAGTCCTGCTCCAA...AGAGCCAGGCTGGGTCCTAACAACTCTCTCTAGCATTTCCGGAGCCCCACGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCGGAGGGGGCCGGCACTaGCAGACGTGTCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRLLLCCSAKHSWDTQQRGGGRH*QTCRQL
Trigger: CAGCTGCCGACACGTCTGCCAGTGCCGGCCCCCTCC...GCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGAGGGGGCCGGCACTaGCAGACGTGTCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTGGGRH*QTCRQL
Trigger: CAGCTGCCGACACGTCTGCCAGTGCCGGCCCCCTCC...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATGGAGGGGGCCGGCACTaGCAGACGTGTCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHGGGRH*QTCRQL
Trigger: CAGCTGCCGACACGTCTGCCAGTGCCGGCCCCCTCC...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQSLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTAAAGACAGATCCCTCTaGCTTCGCCAGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLKDRSL*LRQCAC
Trigger: GCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTT...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTACTCACAGCCCTCCATaGCAGGCAGTCAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPTHSPP*QAVRSL
Trigger: TAGGCTCCTGACTGCCTGCCATGGAGGGCTGTGAGT...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTGGGACATCCAGCGCCTaGCCAGCATCAGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLGTSSA*PASAWY
Trigger: GTACCAGGCTGATGCTGGCCAGGCGCTGGATGTCCC...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTGGCCTCAGGGGACTGTaGGGGACATCCAGCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIGLRGL*GTSSAW
Trigger: CCAGGCGCTGGATGTCCCCCACAGTCCCCTGAGGCC...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAAGGTTCGGCCCAAATaGGGACCGGTTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGKVRPK*GPVFRC
Trigger: ACACCTGAAAACCGGTCCCCATTTGGGCCGAACCTT...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGGTCAGGAGCAGGGGGTaGCACTATGCTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILVRSRG*HYADAQ
Trigger: CTGGGCATCAGCATAGTGCCACCCCCTGCTCCTGAC...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGCACTGTGAAGTACTaGCCAGGTCAGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLSTVKY*PGQEQG
Trigger: CCCCTGCTCCTGACCTGGCCAGTACTTCACAGTGCT...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGGTTGCAGCACAGGGTaGTGTGTGCTTAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPGCSTG*CVLRAR
Trigger: CCTAGCCCTAAGCACACACCACCCTGTGCTGCAACC...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTGGTTGCAGCACAGGGTaGTGTGTGCTTAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPGCSTG*CVLRAR
Trigger: CCTAGCCCTAAGCACACACCACCCTGTGCTGCAACC...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGATGGGCACTTTCTCATaGTTGCAGCACAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGMGTFS*LQHRVV
Trigger: CACCACCCTGTGCTGCAACCATGAGAAAGTGCCCAT...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTAGCCTCGCCTGGGGCTaGAAGATTAGGCTAACTGCA +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGSLAWG*KIRLTA
Trigger: TGCAGTTAGCCTAATCTTCCAGCCCCAGGCGAGGCT...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGGGCCTGTGAGGCAATaGAGTCCTGGACAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMGPVRQ*SPGQAQ
Trigger: CTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCC...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGAGGCTCAGGGCCTGTaGGGCAATGAAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLEAQGL*GNEVLD
Trigger: GTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTGCCGATGGCTTCTGTTaGGAATGTGAACAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGADGFC*ECEQWS
Trigger: GCTCCACTGTTCACATTCTCAACAGAAGCCATCGGC...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGTGTGGGAAGCACCTTTaGAAGGGGACGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRCGKHL*KGTSVC
Trigger: GCAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACA...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTGCAGGCCCTGAAGATTaGCAACAACTGCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPAGPED*QQLQMG
Trigger: CCCCATCTGCAGTTGTTGTCAATCTTCAGGGCCTGC...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATAGTAGTGGCCTCTGCTaGCTAAGGCAGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHSSGLC*LRQGLA
Trigger: AGCCAGGCCCTGCCTTAGTCAGCAGAGGCCACTACT...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATCTCTGGGAGAGGGCCTaGGTACAACAGTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHLWERA*VQQSGL
Trigger: GAGGCCTGACTGTTGTACTCAGGCCCTCTCCCAGAG...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGTAAAATGGGGAGATaGTGGAGGACTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPGKMGR*WRTLGE
Trigger: CTCTCCCAGAGTCCTCCATCATCTCCCCATTTTACC...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCATCCCATTTCATCCCTTaGTCCTCCAACCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPSHFIP*SSNHAG
Trigger: TCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGA...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATTCTCCGTGGGTTTCCTaGTGTGGCCCACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHSPWVS*CGPQGR
Trigger: CCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGA...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCTCTCCGTGGGTTTCCTaGTGTGGCCCACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVASPWVS*CGPQGR
Trigger: CCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGA...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGACCTGGGCAGGACAATaGCACACAGACAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILTWAGQ*HTDSSV
Trigger: CACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGGT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGACCTGGGCAGGACAATaGCACACAGACAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMTWAGQ*HTDSSV
Trigger: CACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGGT...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTACCTCAAGAGCACTGTaGAGTACTGGCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPTSRAL*STGQVR
Trigger: CCTGACCTGGCCAGTACTTCACAGTGCTCTTGAGGT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGAGCCAAGGTAGGGAATaGTGGGACCAGGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILSQGRE*WDQASV
Trigger: CACACTCGCCTGGTCCCATCATTCCCTACCTTGGCT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACAGCCAAGGTAGGGAATaGTGGGACCAGGCGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDSQGRE*WDQASV
Trigger: CACACTCGCCTGGTCCCATCATTCCCTACCTTGGCT...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCGGGTGGAGCGCGCAGTaGAGCAGCAGCGAGGACCAG +
Preference number: 4 (lower is better)
Translates to: SRLLLCCSAKHSWDTQQRGWSAQ*SSSEDQ
Trigger: CTGGTCCTCGCTGCTGCTGCACTGCGCGCTCCACCC...GCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: VPPRCPSGQRVQGLQTHTTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...GGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGRLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCATCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPSHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGTCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILSHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGGGACACTGCCCAGGTaGTGCGCCGGGCTCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VHVYSFVALRSTHGILSNGTLPR*CAGLSL
Trigger: CAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGTCCC...GTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGCTCTGGCTTCGCCAGTaGGCATGCTTTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRLWLRQ*ACFRQQ
Trigger: CTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAG...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTTCTGTCTGCTGGCTGTaGCGATGGCTTCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLSVCWL*RWLLLR
Trigger: TCTCAACAGAAGCCATCGGCACAGCCAGCAGACAGA...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGAAGGGGACGTCTGTCTaGTGGCTGTGCCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMKGTSV*WLCRWL
Trigger: AAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTT...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGAAGGGGACGTCTGTCTaGTGGCTGTGCCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILKGTSV*WLCRWL
Trigger: AAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCACCTGGCTCACACAGATaGATCAGTTCCTATGGGGTC +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPPGSHR*ISSYGV
Trigger: GACCCCATAGGAACTGATGCATCTGTGTGAGCCAGG...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGTTTCCCCCTTTAACCTaGTGCTGGCCCACACCCTCT +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRFPPLT*CWPTPS
Trigger: AGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGGAAA...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTATTAGGGCTAGGGTCCTaGCCAGGGGTCTGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLLGLGS*PGVCLG
Trigger: CCCTAAGCAGACCCCTGGGCAGGACCCTAGCCCTAA...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCATTGGAGCAGGACTTCTaGGGCTCACCATGCGTCACC +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPLEQDF*GSPCVT
Trigger: GGTGACGCATGGTGAGCCCCAGAAGTCCTGCTCCAA...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGTTGGAGCAGGACTTCTaGGGCTCACCATGCGTCACC +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMLEQDF*GSPCVT
Trigger: GGTGACGCATGGTGAGCCCCAGAAGTCCTGCTCCAA...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCTGCGAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCGGAGGGGGCCGGCACTaGCAGACGTGTCGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SAKHSWDTQQRWCHFRLFGGGRH*QTCRQL
Trigger: CAGCTGCCGACACGTCTGCCAGTGCCGGCCCCCTCC...GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSSLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLDQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGAAAGACAGATCCCTCTaGCTTCGCCAGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRKDRSL*LRQCAC
Trigger: GCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTT...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTAAAGACAGATCCCTCTaGCTTCGCCAGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPKDRSL*LRQCAC
Trigger: GCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTT...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACTTTTCCGGCAGGGAGTaGGCTCCGGACCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDFSGRE*APDHLS
Trigger: AGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAAA...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAACTCACAGCCCTCCATaGCAGGCAGTCAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPTHSPP*QAVRSL
Trigger: TAGGCTCCTGACTGCCTGCCATGGAGGGCTGTGAGT...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTCGGGGTAGGGTAAAATaGGGAGATGATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLRGRVK*GDDGGL
Trigger: GAGTCCTCCATCATCTCCCCATTTTACCCTACCCCG...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTACAACACCTCCTTCTTaGCGACTGGGGCTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRATTPPS*RLGLGV
Trigger: TACCCCGAGCCCCAGTCGCCAAGAAGGAGGTGTTGT...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACACAACACCTCCTTCTTaGCGACTGGGGCTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDTTPPS*RLGLGV
Trigger: TACCCCGAGCCCCAGTCGCCAAGAAGGAGGTGTTGT...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTCAGGGGTCACCAGCCTaGAGGACCCCTCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIQGSPA*RTPLLL
Trigger: CAGGAGGAGAGGGGTCCTCCAGGCTGGTGACCCCTG...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCGTGGGTTTCCTGATGTaGCCCACAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAVGFLM*PTGKAA
Trigger: GGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCAC...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTAAGGTTCGGCCCAAATaGGGACCGGTTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLKVRPK*GPVFRC
Trigger: ACACCTGAAAACCGGTCCCCATTTGGGCCGAACCTT...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGTGGGAGGGTATGCCCTaGGCCTGTCCTCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLWEGMP*ACPQPT
Trigger: TGTGGGCTGAGGACAGGCCCAGGGCATACCCTCCCA...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGAAGAAAACCCCTTTATaGGAGGGTATGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPAKKTPL*EGMPWA
Trigger: GGCCCAGGGCATACCCTCCCATAAAGGGGTTTTCTT...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTAGCACTGTGAAGTACTaGCCAGGTCAGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHASTVKY*PGQEQG
Trigger: CCCCTGCTCCTGACCTGGCCAGTACTTCACAGTGCT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTCTGGCCCACACCCTCTaGCCTATTTGTCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRALAHTL*PICQLA
Trigger: AGCCAGCTGACAAATAGGCCAGAGGGTGTGGGCCAG...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTGGTTGCAGCACAGGGTaGTGTGTGCTTAGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAGCSTG*CVLRAR
Trigger: CCTAGCCCTAAGCACACACCACCCTGTGCTGCAACC...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAATGGGCACTTTCTCATaGTTGCAGCACAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPMGTFS*LQHRVV
Trigger: CACCACCCTGTGCTGCAACCATGAGAAAGTGCCCAT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCATCACTCCTGAGCTTCTaGACAGCCCAAGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPSLLSF*TAQGMG
Trigger: GCCCATGCCTTGGGCTGTCCAGAAGCTCAGGAGTGA...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTCTGCCCACCACTCCATaGTCCCTTAGCCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRALPTTP*SLSQEP
Trigger: AGGTTCCTGGCTAAGGGACCATGGAGTGGTGGGCAG...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGCTGCCCACCACTCCATaGTCCCTTAGCCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILLPTTP*SLSQEP
Trigger: AGGTTCCTGGCTAAGGGACCATGGAGTGGTGGGCAG...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTGAGTGTGCGCAAAGCTaGGCTGTGCCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVECAQS*AVPSPF
Trigger: GAAGGGGCTGGGCACAGCCCAGCTTTGCGCACACTC...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGGAGGCTCAGGGCCTGTaGGGCAATGAAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLEAQGL*GNEVLD
Trigger: GTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTC...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTCTTCTGTTGAGAATGTaGACAGTGGAGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPLLLRM*TVEQAG
Trigger: GCCTGCCTGCTCCACTGTTCACATTCTCAACAGAAG...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCGGAGAAGGCAGGCCCTaGAGATTGACAACAACTGCA +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLGEGRP*RLTTTA
Trigger: TGCAGTTGTTGTCAATCTTCAGGGCCTGCCTTCTCC...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACTCCCATTTCATCCCTTaGTCCTCCAACCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDSHFIP*SSNHAG
Trigger: TCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGA...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAACCTCAAGAGCACTGTaGAGTACTGGCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPTSRAL*STGQVR
Trigger: CCTGACCTGGCCAGTACTTCACAGTGCTCTTGAGGT...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTAGAGAAGGTGCCCTCTaGTCACTCCTGAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAREGAL*SLLSFW
Trigger: CCAGAAGCTCAGGAGTGATCAGAGGGCACCTTCTCT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTTCACCATGCGTCACCTaGACGAAGCCCCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQISPCVT*TKPQSG
Trigger: CCCGCTCTGGGGCTTCGTGCAGGTGACGCATGGTGA...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGGCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGGACCCAGCCTGGCTCTaGAGCTCTGTGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GPADSHHCVVHVYSFVALDPAWL*SSVSQL
Trigger: CAGCTGACTCACAGAGCTGCAGAGCCAGGCTGGGTC...CAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTACTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLLRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTCTCTGGCTTCGCCAGTaGGCATGCTTTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHALWLRQ*ACFRQQ
Trigger: CTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAG...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACTCTGTCTGCTGGCTGTaGCGATGGCTTCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDSVCWL*RWLLLR
Trigger: TCTCAACAGAAGCCATCGGCACAGCCAGCAGACAGA...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGTCTGTCTGCTGGCTGTaGCGATGGCTTCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRSVCWL*RWLLLR
Trigger: TCTCAACAGAAGCCATCGGCACAGCCAGCAGACAGA...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTCTCAGGAGGGGATTCTaGAGGCTGGACTCACAGCCC +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVLRRGF*RLDSQP
Trigger: GGGCTGTGAGTCCAGCCTGCAGAATCCCCTCCTGAG...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGACGCACTCCTGTGTCTaGTCAGGAGGGGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILTHSCV*SGGDSA
Trigger: TGCAGAATCCCCTCCTGAGCAGACACAGGAGTGCGT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTCCTGGCTCACACAGATaGATCAGTTCCTATGGGGTC +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPPGSHR*ISSYGV
Trigger: GACCCCATAGGAACTGATGCATCTGTGTGAGCCAGG...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACGCACTTTCTCATGGTTaGAGCACAGGGTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDALSHG*STGWCV
Trigger: CACACACCACCCTGTGCTGCAACCATGAGAAAGTGC...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACACCAGCCCCTTCAGGCTaGCCACCACTCCATGGTCCC +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTPAPSG*PPLHGP
Trigger: GGGACCATGGAGTGGTGGGCAGCCTGAAGGGGCTGG...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGGGACCAGGCGAGTGTaGGCAAAGCTGGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVGTRRV*AKLGCA
Trigger: GGCACAGCCCAGCTTTGCGCACACTCGCCTGGTCCC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGCTAGTGGGTCTCCCTTaGTGTGCCGTATACTTGTTT +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQLVGLP*CAVYLF
Trigger: AAACAAGTATACGGCACAGCAAGGGAGACCCACTAG...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTATTGGAGCAGGACTTCTaGGGCTCACCATGCGTCACC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLLEQDF*GSPCVT
Trigger: GGTGACGCATGGTGAGCCCCAGAAGTCCTGCTCCAA...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTTGGAGCAGGACTTCTaGGGCTCACCATGCGTCACC +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLLEQDF*GSPCVT
Trigger: GGTGACGCATGGTGAGCCCCAGAAGTCCTGCTCCAA...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPSAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPSAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGAGGCAATGAAGTCCTaGACAAGCTCAGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFEAMKS*TSSGLA
Trigger: AGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTC...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPSLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTGGTGTCCGAGCTGCCTaGGCCCGCAGGCTGACCAGG +
Preference number: 4 (lower is better)
Translates to: EALMGYSATLVPFSSFLSGVRAA*ARRLTR
Trigger: CCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACC...ACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp ACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTGGTTTGCGCCGGGCTCAGCCTaGTGTCCGAGCTGCCTGGGC +
Preference number: 4 (lower is better)
Translates to: THGILSNAGAIFVFSQWFAPGSA*CPSCLG
Trigger: GCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC...AAACCACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACAAAGACAGATCCCTCTaGCTTCGCCAGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDKDRSL*LRQCAC
Trigger: GCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTT...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTGGACCATCTTTCTTTTaGCTAAAGGGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLGPSFF*LKGEAS
Trigger: GGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCC...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCATTTTCCGGCAGGGAGTaGGCTCCGGACCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPFSGRE*APDHLS
Trigger: AGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAAA...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGGACAACAACTGCAGATaGGGCGATGAACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGDNNCR*GDEQMC
Trigger: ACACATCTGTTCATCGCCCCATCTGCAGTTGTTGTC...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACATCTGCCCTTGCCCAGTaGCCCTGGGCTGCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTSALAQ*PWAAGS
Trigger: TGAACCCGCAGCCCAGGGCCACTGGGCAAGGGCAGA...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAACAACACCTCCTTCTTaGCGACTGGGGCTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLTTPPS*RLGLGV
Trigger: TACCCCGAGCCCCAGTCGCCAAGAAGGAGGTGTTGT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCACAACACCTCCTTCTTaGCGACTGGGGCTCGGGGTA +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVATTPPS*RLGLGV
Trigger: TACCCCGAGCCCCAGTCGCCAAGAAGGAGGTGTTGT...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTATCCTCCAACCACGCTaGAGGGCTCAGCGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAILQPR*RAQRFY
Trigger: ATAGAAGCGCTGAGCCCTCCAGCGTGGTTGGAGGAT...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGGGAAGGCTGCCACTTaGGAGACAGGCCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGAGKAAT*ETGQQG
Trigger: GCCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCC...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTTGGGAGGGTATGCCCTaGGCCTGTCCTCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIWEGMP*ACPQPT
Trigger: TGTGGGCTGAGGACAGGCCCAGGGCATACCCTCCCA...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTGGCCTATTTGTCAGCTaGCTCCGCACCTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAGLFVS*LRTSRA
Trigger: TGCTCTTGAGGTGCGGAGCCAGCTGACAAATAGGCC...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTCTGGCCCACACCCTCTaGCCTATTTGTCAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLLAHTL*PICQLA
Trigger: AGCCAGCTGACAAATAGGCCAGAGGGTGTGGGCCAG...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGGACAGCCCAAGGCATaGGCACTTTCTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPGQPKA*ALSHGC
Trigger: GCAACCATGAGAAAGTGCCCATGCCTTGGGCTGTCC...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTCACTCCTGAGCTTCTaGACAGCCCAAGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLSLLSF*TAQGMG
Trigger: GCCCATGCCTTGGGCTGTCCAGAAGCTCAGGAGTGA...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGAGCCTCGCCTGGGGCTaGAAGATTAGGCTAACTGCA +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMSLAWG*KIRLTA
Trigger: TGCAGTTAGCCTAATCTTCCAGCCCCAGGCGAGGCT...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTAGCCTCGCCTGGGGCTaGAAGATTAGGCTAACTGCA +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRASLAWG*KIRLTA
Trigger: TGCAGTTAGCCTAATCTTCCAGCCCCAGGCGAGGCT...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTCTCATAAGTGGCATATaGACACCCCCAGTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRALISGI*TPPVLP
Trigger: CGGCAGCACTGGGGGTGTCCATATGCCACTTATGAG...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CAA 72 bp CAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTaGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCA +
Preference number: 4 (lower is better)
Translates to: QRVQGLQTHTTA*FTSTPLLLCEA
Trigger: TGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR TCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTGGGCCTGTGAGGCAATaGAGTCCTGGACAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVGPVRQ*SPGQAQ
Trigger: CTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCC...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGGAGGCTCAGGGCCTGTaGGGCAATGAAGTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: HHCVVHVYSFVALRSTHGEAQGL*GNEVLD
Trigger: GTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTC...CCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR TCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGGCCGATGGCTTCTGTTaGGAATGTGAACAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILADGFC*ECEQWS
Trigger: GCTCCACTGTTCACATTCTCAACAGAAGCCATCGGC...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTGCCGATGGCTTCTGTTaGGAATGTGAACAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAADGFC*ECEQWS
Trigger: GCTCCACTGTTCACATTCTCAACAGAAGCCATCGGC...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTCTGCAGATGGGGCGATaGACAGATGTGTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLLQMGR*TDVWEA
Trigger: TGCTTCCCACACATCTGTTCATCGCCCCATCTGCAG...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGGGCTGCGGGTTCAGTaGGTCGTTTTGCCCCCGGAA +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVGLRVQ*VVLPPE
Trigger: TTCCGGGGGCAAAACGACTCACTGAACCCGCAGCCC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAAGTAGTGGCCTCTGCTaGCTAAGGCAGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGASSGLC*LRQGLA
Trigger: AGCCAGGCCCTGCCTTAGTCAGCAGAGGCCACTACT...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGTCCCATTTCATCCCTTaGTCCTCCAACCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMSHFIP*SSNHAG
Trigger: TCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGA...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTACCTGGGCAGGACAATaGCACACAGACAGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVTWAGQ*HTDSSV
Trigger: CACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGGT...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAAGAGAAGGTGCCCTCTaGTCACTCCTGAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLREGAL*SLLSFW
Trigger: CCAGAAGCTCAGGAGTGATCAGAGGGCACCTTCTCT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAACTAGGCTCTTCCCTTaGTTTTTGCTAACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPTRLFP*FLLTGV
Trigger: CACCCCAGTTAGCAAAAATCAAGGGAAGAGCCTAGT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGTTGGGGTCAACTGTaGGACGGCTGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLSWGQL*DGWKRS
Trigger: AGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACT...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGAGATCCTATGATCTaGGTTCCAAAGTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPAGDPMI*VPKLGS
Trigger: TGACCCCAACTTTGGAACTCAGATCATAGGATCTCC...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCACTCTGGGAGATCCTATaGTCTGAGTTCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPLWEIL*SEFQSW
Trigger: CCAACTTTGGAACTCAGATCATAGGATCTCCCAGAG...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTCACCATGCGTCACCTaGACGAAGCCCCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHSPCVT*TKPQSG
Trigger: CCCGCTCTGGGGCTTCGTGCAGGTGACGCATGGTGA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTCGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPRLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACCAAGAAGAGGCATTTCCACCCTGGTCCAGGCAGAGATGGCCACAGAGGGCTCGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: TKKRHFHPGPGRDGHRGLADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...GAGCCCTCTGTGGCCATCTCTGCCTGGACCAGGGTGGAAATGCCTCTTCTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp TTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACACTGCCCAGGTGCTaGGCCGGGCTCAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: LFTSTPLLLCEALMGYSATLPRC*AGLSLV
Trigger: CACCAGGCTGAGCCCGGCGCAGCACCTGGGCAGTGT...TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTATTCAGTGAGTCGTTTTaGCCCCGGAAGGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLFSESF*PRKARH
Trigger: GTGTCTGGCCTTCCGGGGGCAAAACGACTCACTGAA...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATCCCCCTTTAACCTGCTaGTGGCCCACACCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHPPLTC*WPTPSG
Trigger: GCCAGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGG...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTGCACTTTCTCATGGTTaGAGCACAGGGTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAALSHG*STGWCV
Trigger: CACACACCACCCTGTGCTGCAACCATGAGAAAGTGC...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGAGAGGGAATTTATGTaGAGACTAGAGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSEREFM*RLEPWM
Trigger: CATCCAGGGCTCTAGTCTGCACATAAATTCCCTCTC...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTCTAGTGGGTCTCCCTTaGTGTGCCGTATACTTGTTT +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLLVGLP*CAVYLF
Trigger: AAACAAGTATACGGCACAGCAAGGGAGACCCACTAG...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTATGGACACCCCCAGTaGTGCCGGTCTCGCTTCCGG +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHYGHPQ*CRSRFR
Trigger: CCGGAAGCGAGACCGGCAGCACTGGGGGTGTCCATA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGGTAGAGTTGGGAGCTaGGGCGGAGAGGAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVGRVGS*GGEESG
Trigger: CCCAGACTCCTCTCCGCCCCAGCTCCCAACTCTACC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCAGAGGGCTCCCTAGATaGCATGGTTCCTTTTTATGG +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFRGLPR*HGSFLW
Trigger: CCATAAAAAGGAACCATGCCATCTAGGGAGCCCTCT...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGAGAGGGCTCCCTAGATaGCATGGTTCCTTTTTATGG +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPARGLPR*HGSFLW
Trigger: CCATAAAAAGGAACCATGCCATCTAGGGAGCCCTCT...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSDTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCATCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPSAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHASLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPSLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: ACRLTPLRCSRLLLCCSAALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...CGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAAAAGACAGATCCCTCTaGCTTCGCCAGTGCGCATGC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLKDRSL*LRQCAC
Trigger: GCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCCCGTGGGGCTCCGGAAATGCTAGAGAGAGTTGTTAGGACCCAGCCTGGCTCTGGACCATCTTTCTTTTaGCTAAAGGGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PRGAPEMLERVVRTQPGSGPSFF*LKGEAS
Trigger: GGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCC...AGAGCCAGGCTGGGTCCTAACAACTCTCTCTAGCATTTCCGGAGCCCCACGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGGGACCATCTTTCTTTTaGCTAAAGGGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRGPSFF*LKGEAS
Trigger: GGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCC...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGGGACGTCTGTCTGCTaGCTGTGCCGATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGAGTSVC*LCRWLL
Trigger: CAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCC...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACACTTGCCCAGTGGCCCTaGGCTGCGGGTTCAGTGAGT +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTLAQWP*AAGSVS
Trigger: ACTCACTGAACCCGCAGCCCAGGGCCACTGGGCAAG...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCTCTGCCCTTGCCCAGTaGCCCTGGGCTGCGGGTTCA +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVSALAQ*PWAAGS
Trigger: TGAACCCGCAGCCCAGGGCCACTGGGCAAGGGCAGA...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGGACATCCAGCGCCTaGCCAGCATCAGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTGTSSA*PASAWY
Trigger: GTACCAGGCTGATGCTGGCCAGGCGCTGGATGTCCC...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACCGGGGTAGGGTAAAATaGGGAGATGATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDRGRVK*GDDGGL
Trigger: GAGTCCTCCATCATCTCCCCATTTTACCCTACCCCG...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGGGAAGGCTGCCACTTaGGAGACAGGCCAACAGGGC +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVGKAAT*ETGQQG
Trigger: GCCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGGTTTCCTGATGTaGCCCACAGGGAAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGAVGFLM*PTGKAA
Trigger: GGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCAC...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACATCAGAGGAGCACACTaGAGGTTTAGGAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDIRGAH*RFRRQT
Trigger: GGTTTGCCTCCTAAACCTCCAGTGTGCTCCTCTGAT...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTCAGGAGCAGGGGGTaGCACTATGCTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGAVRSRG*HYADAQ
Trigger: CTGGGCATCAGCATAGTGCCACCCCCTGCTCCTGAC...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTATGGGCACTTTCTCATaGTTGCAGCACAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAMGTFS*LQHRVV
Trigger: CACCACCCTGTGCTGCAACCATGAGAAAGTGCCCAT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGGACAGCCCAAGGCATaGGCACTTTCTCATGGTTGC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLGQPKA*ALSHGC
Trigger: GCAACCATGAGAAAGTGCCCATGCCTTGGGCTGTCC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTGCCCACCACTCCATaGTCCCTTAGCCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLLPTTP*SLSQEP
Trigger: AGGTTCCTGGCTAAGGGACCATGGAGTGGTGGGCAG...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATGAGTGTGCGCAAAGCTaGGCTGTGCCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHECAQS*AVPSPF
Trigger: GAAGGGGCTGGGCACAGCCCAGCTTTGCGCACACTC...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CAA 72 bp TTTCCGGCAGGGAGTGGGCTCCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: FPAGSGLRTIFL*AKGGSLPATVE
Trigger: TTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGCCGATGGCTTCTGTTaGGAATGTGAACAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLADGFC*ECEQWS
Trigger: GCTCCACTGTTCACATTCTCAACAGAAGCCATCGGC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTGCAGGCCCTGAAGATTaGCAACAACTGCAGATGGGG +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVAGPED*QQLQMG
Trigger: CCCCATCTGCAGTTGTTGTCAATCTTCAGGGCCTGC...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATAGTAGTGGCCTCTGCTaGCTAAGGCAGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHSSGLC*LRQGLA
Trigger: AGCCAGGCCCTGCCTTAGTCAGCAGAGGCCACTACT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTAGTAGTGGCCTCTGCTaGCTAAGGCAGGGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVSSGLC*LRQGLA
Trigger: AGCCAGGCCCTGCCTTAGTCAGCAGAGGCCACTACT...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTGGTAAAATGGGGAGATaGTGGAGGACTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLGKMGR*WRTLGE
Trigger: CTCTCCCAGAGTCCTCCATCATCTCCCCATTTTACC...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGAGCGCTTCTATAGCATaGGACTGTGGAAACAGACAT +
Preference number: 4 (lower is better)
Translates to: STCFPMSTSATKVSLWPASASIA*DCGNRH
Trigger: ATGTCTGTTTCCACAGTCTCATGCTATAGAAGCGCT...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTATCCCATTTCATCCCTTaGTCCTCCAACCACGCTGGA +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLSHFIP*SSNHAG
Trigger: TCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGA...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTCTCCGTGGGTTTCCTaGTGTGGCCCACAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHSPWVS*CGPQGR
Trigger: CCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCACCCTCTGATCACTCCTaGGCTTCTGGACAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGAPSDHS*ASGQPK
Trigger: CTTGGGCTGTCCAGAAGCTCAGGAGTGATCAGAGGG...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTTTTTACAAGCCCAGCTaGGAGGGAATTTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGFYKPS*EGIYVQ
Trigger: CTGCACATAAATTCCCTCTCAGCTGGGCTTGTAAAA...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACAGTTGGGGTCAACTGTaGGACGGCTGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDSWGQL*DGWKRS
Trigger: AGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACT...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTAGTTGGGGTCAACTGTaGGACGGCTGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRASWGQL*DGWKRS
Trigger: AGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACT...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTCTCTGGGAGATCCTATaGTCTGAGTTCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPLWEIL*SEFQSW
Trigger: CCAACTTTGGAACTCAGATCATAGGATCTCCCAGAG...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCTGTACATTTGCCCATTaGGAGAACTCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLCTFAH*ENSQEQ
Trigger: TTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACA...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACCGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDRLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCAGCGGGTCCAGGGCCTaGAGACTCACACCACTGCGT +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVSGSRA*RLTPLR
Trigger: ACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGCTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HHCVVHVYSFVALRSTHGLRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...CCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTCTCTGGCTTCGCCAGTaGGCATGCTTTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVLWLRQ*ACFRQQ
Trigger: CTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAG...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTAAGATTGACAACAACTaGAGATGGGGCGATGAACAG +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLKIDNN*RWGDEQ
Trigger: CTGTTCATCGCCCCATCTGCAGTTGTTGTCAATCTT...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGACGCACTCCTGTGTCTaGTCAGGAGGGGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLTHSCV*SGGDSA
Trigger: TGCAGAATCCCCTCCTGAGCAGACACAGGAGTGCGT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATCCAGTGGCCCTGGGCTaGGGGTTCAGTGAGTCGTTT +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHPVALG*GFSESF
Trigger: AAACGACTCACTGAACCCGCAGCCCAGGGCCACTGG...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCTCATTTTCCAGGAGATaGAAAATCACCCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFSFSRR*KITLSP
Trigger: CGGAGACAGGGTGATTTTGCATCTCCTGGAAAATGA...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGTCATTTTCCAGGAGATaGAAAATCACCCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSSFSRR*KITLSP
Trigger: CGGAGACAGGGTGATTTTGCATCTCCTGGAAAATGA...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTAGTGGAACCATTCAATaGATTGGGCTCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPSGTIQ*IGLLLS
Trigger: GCTCAGAAGGAGCCCAATGCATTGAATGGTTCCACT...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCTCCTGCCCAGGGGTCTaGTTAGGGCACAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVSCPGV*LGHSLG
Trigger: CCCCAAGCTGTGCCCTAAGCAGACCCCTGGGCAGGA...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGGAGAGGGAATTTATGTaGAGACTAGAGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVREREFM*RLEPWM
Trigger: CATCCAGGGCTCTAGTCTGCACATAAATTCCCTCTC...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCCTAGTGGGTCTCCCTTaGTGTGCCGTATACTTGTTT +
Preference number: 4 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLLVGLP*CAVYLF
Trigger: AAACAAGTATACGGCACAGCAAGGGAGACCCACTAG...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPDTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTATCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLSAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACGAGGCAATGAAGTCCTaGACAAGCTCAGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDEAMKS*TSSGLA
Trigger: AGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTC...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GGGCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GPADSHHCVVHVYSFVALDQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...CAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGGACCATCTTTCTTTTaGCTAAAGGGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPGPSFF*LKGEAS
Trigger: GGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCC...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCCGGGGTAGGGTAAAATaGGGAGATGATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVARGRVK*GDDGGL
Trigger: GAGTCCTCCATCATCTCCCCATTTTACCCTACCCCG...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTATCCTCCAACCACGCTaGAGGGCTCAGCGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVILQPR*RAQRFY
Trigger: ATAGAAGCGCTGAGCCCTCCAGCGTGGTTGGAGGAT...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTTGGGCACTAGGACTCTaGGACAATGGGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPWALGL*DNGLFK
Trigger: CTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCA...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATAAGAAAACCCCTTTATaGGAGGGTATGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHKKTPL*EGMPWA
Trigger: GGCCCAGGGCATACCCTCCCATAAAGGGGTTTTCTT...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCATGGGCACTTTCTCATaGTTGCAGCACAGGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAMGTFS*LQHRVV
Trigger: CACCACCCTGTGCTGCAACCATGAGAAAGTGCCCAT...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGACCTTAATGGCTTGTTaGTGGATAAGACGGCATCAA +
Preference number: 4 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQTLMAC*WIRRHQ
Trigger: TTGATGCCGTCTTATCCACCAACAAGCCATTAAGGT...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCATTTCTTCCTCATAAGTaGCATATGGACACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPFLPHK*HMDTPS
Trigger: ACTGGGGGTGTCCATATGCCACTTATGAGGAAGAAA...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCGGGCCTGTGAGGCAATaGAGTCCTGGACAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SRLLLCCSAKHSWDTQQRGPVRQ*SPGQAQ
Trigger: CTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCC...GCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR TCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTAGAGAAGGTGCCCTCTaGTCACTCCTGAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIREGAL*SLLSFW
Trigger: CCAGAAGCTCAGGAGTGATCAGAGGGCACCTTCTCT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCAGTTGGGGTCAACTGTaGGACGGCTGGAAAAGATCT +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVASWGQL*DGWKRS
Trigger: AGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACT...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACGGAGATCCTATGATCTaGGTTCCAAAGTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDGDPMI*VPKLGS
Trigger: TGACCCCAACTTTGGAACTCAGATCATAGGATCTCC...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGCTCTGGGAGATCCTATaGTCTGAGTTCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILLWEIL*SEFQSW
Trigger: CCAACTTTGGAACTCAGATCATAGGATCTCCCAGAG...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTCTTCTTAGGAACACCTaGAACCTCTGGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHALLRNT*NLWEIL
Trigger: TAGGATCTCCCAGAGGTTTCAGGTGTTCCTAAGAAG...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCACTTCTTAGGAACACCTaGAACCTCTGGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPLLRNT*NLWEIL
Trigger: TAGGATCTCCCAGAGGTTTCAGGTGTTCCTAAGAAG...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTTCACCATGCGTCACCTaGACGAAGCCCCAGAGCGGG +
Preference number: 4 (lower is better)
Translates to: EALMGYSATLVPFSSFLSSPCVT*TKPQSG
Trigger: CCCGCTCTGGGGCTTCGTGCAGGTGACGCATGGTGA...ACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCTTCTGGGGCTCACCATaGGTCACCTGCACGAAGCCC +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVFWGSP*VTCTKP
Trigger: GGGCTTCGTGCAGGTGACGCATGGTGAGCCCCAGAA...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGACCCAGCCTGGCTCTaGAGCTCTGTGAGTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VHVYSFVALRSTHGILSNDPAWL*SSVSQL
Trigger: CAGCTGACTCACAGAGCTGCAGAGCCAGGCTGGGTC...GTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp CCCCGTGGGGCTCCGGAAATGCTAGAGAGAGTTGTTAGGACCCAGCCTGGCTCTACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: PRGAPEMLERVVRTQPGSTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...AGAGCCAGGCTGGGTCCTAACAACTCTCTCTAGCATTTCCGGAGCCCCACGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTCGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLRLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACATCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTSHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTTCTGTCTGCTGGCTGTaGCGATGGCTTCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVSVCWL*RWLLLR
Trigger: TCTCAACAGAAGCCATCGGCACAGCCAGCAGACAGA...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACAAGATTGACAACAACTaGAGATGGGGCGATGAACAG +
Preference number: 4 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDKIDNN*RWGDEQ
Trigger: CTGTTCATCGCCCCATCTGCAGTTGTTGTCAATCTT...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAAGATTGACAACAACTaGAGATGGGGCGATGAACAG +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDKIDNN*RWGDEQ
Trigger: CTGTTCATCGCCCCATCTGCAGTTGTTGTCAATCTT...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACTCATTTTCCAGGAGATaGAAAATCACCCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDSFSRR*KITLSP
Trigger: CGGAGACAGGGTGATTTTGCATCTCCTGGAAAATGA...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGAGTGGAACCATTCAATaGATTGGGCTCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILSGTIQ*IGLLLS
Trigger: GCTCAGAAGGAGCCCAATGCATTGAATGGTTCCACT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTAGTGGAACCATTCAATaGATTGGGCTCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHASGTIQ*IGLLLS
Trigger: GCTCAGAAGGAGCCCAATGCATTGAATGGTTCCACT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGATCAACTTGTACATTTaGCCATTGAGAGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGINLYI*PLRELP
Trigger: TGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGAT...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTTGGAGCAGGACTTCTaGGGCTCACCATGCGTCACC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHLEQDF*GSPCVT
Trigger: GGTGACGCATGGTGAGCCCCAGAAGTCCTGCTCCAA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACCTAACGCGTGCCCCGTaGGGCTCCGGAAATGCTAGA +
Preference number: 4 (lower is better)
Translates to: VHVYSFVALRSTHGILSNLTRAP*GSGNAR
Trigger: TCTAGCATTTCCGGAGCCCCACGGGGCACGCGTTAG...GTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTTCGTCTTTTCTCAGTaGTTTCCTAACGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLFVFSQ*FPNACP
Trigger: GGGGCACGCGTTAGGAAACCACTGAGAAAAGACGAA...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPDTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGAGGCAATGAAGTCCTaGACAAGCTCAGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLEAMKS*TSSGLA
Trigger: AGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGGACCATCTTTCTTTTaGCTAAAGGGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLGPSFF*LKGEAS
Trigger: GGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGGACAACAACTGCAGATaGGGCGATGAACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILDNNCR*GDEQMC
Trigger: ACACATCTGTTCATCGCCCCATCTGCAGTTGTTGTC...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAACTCACAGCCCTCCATaGCAGGCAGTCAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTTHSPP*QAVRSL
Trigger: TAGGCTCCTGACTGCCTGCCATGGAGGGCTGTGAGT...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTTTGAAAGGAAGACCCTaGAAGAACAACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPLKGRP*KNNTSF
Trigger: GAAGGAGGTGTTGTTCTTCCAGGGTCTTCCTTTCAA...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTATCCTCCAACCACGCTaGAGGGCTCAGCGCTTCTAT +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIILQPR*RAQRFY
Trigger: ATAGAAGCGCTGAGCCCTCCAGCGTGGTTGGAGGAT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGTGGGCACTAGGACTCTaGGACAATGGGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: SLPATVERQIPLASPVRMWALGL*DNGLFK
Trigger: CTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCA...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATACACAGACAGCTCCGTaGGCACTAGGACTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHTQTAP*ALGLWD
Trigger: GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGAAGAAAACCCCTTTATaGGAGGGTATGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLKKTPL*EGMPWA
Trigger: GGCCCAGGGCATACCCTCCCATAAAGGGGTTTTCTT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTTCACTCCTGAGCTTCTaGACAGCCCAAGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVSLLSF*TAQGMG
Trigger: GCCCATGCCTTGGGCTGTCCAGAAGCTCAGGAGTGA...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCTGCAGACTAGAGCCCTaGATGCGTCAGCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVCRLEP*MRQRLR
Trigger: CCTGAGCCGCTGACGCATCCAGGGCTCTAGTCTGCA...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCACTTCTGTTGAGAATGTaGACAGTGGAGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGALLLRM*TVEQAG
Trigger: GCCTGCCTGCTCCACTGTTCACATTCTCAACAGAAG...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGGAGAAGGCAGGCCCTaGAGATTGACAACAACTGCA +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGAGEGRP*RLTTTA
Trigger: TGCAGTTGTTGTCAATCTTCAGGGCCTGCCTTCTCC...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCCTCTGGGAGAGGGCCTaGGTACAACAGTCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQILWERA*VQQSGL
Trigger: GAGGCCTGACTGTTGTACTCAGGCCCTCTCCCAGAG...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATACCTCAAGAGCACTGTaGAGTACTGGCCAGGTCAGG +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHTSRAL*STGQVR
Trigger: CCTGACCTGGCCAGTACTTCACAGTGCTCTTGAGGT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATAGAGAAGGTGCCCTCTaGTCACTCCTGAGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHREGAL*SLLSFW
Trigger: CCAGAAGCTCAGGAGTGATCAGAGGGCACCTTCTCT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAACTAGGCTCTTCCCTTaGTTTTTGCTAACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLTRLFP*FLLTGV
Trigger: CACCCCAGTTAGCAAAAATCAAGGGAAGAGCCTAGT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCACTAGGCTCTTCCCTTaGTTTTTGCTAACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVATRLFP*FLLTGV
Trigger: CACCCCAGTTAGCAAAAATCAAGGGAAGAGCCTAGT...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGAGATCCTATGATCTaGGTTCCAAAGTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHGDPMI*VPKLGS
Trigger: TGACCCCAACTTTGGAACTCAGATCATAGGATCTCC...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCGGAGATCCTATGATCTaGGTTCCAAAGTTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVAGDPMI*VPKLGS
Trigger: TGACCCCAACTTTGGAACTCAGATCATAGGATCTCC...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTCTCTGGGAGATCCTATaGTCTGAGTTCCAAAGTTGG +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLLWEIL*SEFQSW
Trigger: CCAACTTTGGAACTCAGATCATAGGATCTCCCAGAG...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTCTTCTTAGGAACACCTaGAACCTCTGGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLLLRNT*NLWEIL
Trigger: TAGGATCTCCCAGAGGTTTCAGGTGTTCCTAAGAAG...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGCGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: ACRLTPLRCSRLLLCCSARLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...CGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCCTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVLRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTAAGATTGACAACAACTaGAGATGGGGCGATGAACAG +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAKIDNN*RWGDEQ
Trigger: CTGTTCATCGCCCCATCTGCAGTTGTTGTCAATCTT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAACGCACTCCTGTGTCTaGTCAGGAGGGGATTCTGCA +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTTHSCV*SGGDSA
Trigger: TGCAGAATCCCCTCCTGAGCAGACACAGGAGTGCGT...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTTCAGTGAGTCGTTTTaGCCCCGGAAGGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHFSESF*PRKARH
Trigger: GTGTCTGGCCTTCCGGGGGCAAAACGACTCACTGAA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGAGAGGGAATTTATGTaGAGACTAGAGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHEREFM*RLEPWM
Trigger: CATCCAGGGCTCTAGTCTGCACATAAATTCCCTCTC...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGTTCGTCTTTTCTCAGTaGTTTCCTAACGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ACRLTPLRCSRLLLCCSAFVFSQ*FPNACP
Trigger: GGGGCACGCGTTAGGAAACCACTGAGAAAAGACGAA...CGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDDTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCATCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGASAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGGAGGCAATGAAGTCCTaGACAAGCTCAGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: ACRLTPLRCSRLLLCCSAEAMKS*TSSGLA
Trigger: AGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTC...CGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRLLLCCSAKHSWDTQQRDQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...GCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATGACCAGGGGCAAGCCTaGGAAGACAATGGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHDQGQA*EDNGFS
Trigger: GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTC...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACATTTTCCGGCAGGGAGTaGGCTCCGGACCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTFSGRE*APDHLS
Trigger: AGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAAA...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCGACAACAACTGCAGATaGGGCGATGAACAGATGTGT +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVADNNCR*GDEQMC
Trigger: ACACATCTGTTCATCGCCCCATCTGCAGTTGTTGTC...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTGAAAGGAAGACCCTaGAAGAACAACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PPCHSRKTDPSGFASAHALKGRP*KNNTSF
Trigger: GAAGGAGGTGTTGTTCTTCCAGGGTCTTCCTTTCAA...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTAAGGTTCGGCCCAAATaGGGACCGGTTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIKVRPK*GPVFRC
Trigger: ACACCTGAAAACCGGTCCCCATTTGGGCCGAACCTT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCAGCACTGTGAAGTACTaGCCAGGTCAGGAGCAGGGG +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVSTVKY*PGQEQG
Trigger: CCCCTGCTCCTGACCTGGCCAGTACTTCACAGTGCT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCCCAGGGAGCCTCGCCTaGGGCTGGAAGATTAGGCTA +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQIPGSLA*GWKIRL
Trigger: TAGCCTAATCTTCCAGCCCCAGGCGAGGCTCCCTGG...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGTTTCTTCCTCATAAGTaGCATATGGACACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: DTAPECKRTPVSAQEGILFLPHK*HMDTPS
Trigger: ACTGGGGGTGTCCATATGCCACTTATGAGGAAGAAA...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGGAGAAGGCAGGCCCTaGAGATTGACAACAACTGCA +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVGEGRP*RLTTTA
Trigger: TGCAGTTGTTGTCAATCTTCAGGGCCTGCCTTCTCC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTATTTTACAAGCCCAGCTaGGAGGGAATTTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLFYKPS*EGIYVQ
Trigger: CTGCACATAAATTCCCTCTCAGCTGGGCTTGTAAAA...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTCTTCTTAGGAACACCTaGAACCTCTGGGAGATCCTA +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVLLRNT*NLWEIL
Trigger: TAGGATCTCCCAGAGGTTTCAGGTGTTCCTAAGAAG...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTTGTACATTTGCCCATTaGGAGAACTCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVCTFAH*ENSQEQ
Trigger: TTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACA...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTGGTTTTGGTTTCCTAACGCGTaGCCCGTGGGGCTCCGGAAA +
Preference number: 4 (lower is better)
Translates to: THGILSNAGAIFVFSQWFWFPNA*PVGLRK
Trigger: TTTCCGGAGCCCCACGGGGCACGCGTTAGGAAACCA...AAACCACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GGGCCTGCAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGACTCCTTTGTTGCTCTaGGAAGCACTCATGGGATAC +
Preference number: 4 (lower is better)
Translates to: GPADSHHCVVHVYSFVALTPLLL*EALMGY
Trigger: GTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGT...CAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGCAGGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATGCAGACTCACACCACTaGGTTGTTCACGTCTACTCC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHADSHH*VVHVYS
Trigger: GGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTGC...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTTCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: EALMGYSATLVPFSSFLSSHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...ACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp TTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCATCCCATGTCCACCAGTaGCACCAAGGTGTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFTSTPLLLCEALMGYSASHVHQ*HQGVPL
Trigger: CAGAGGGACACCTTGGTGGCACTGGTGGACATGGGA...TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp TTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCACTTCGCCAGTGCGCATaGTTTAGACAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LFTSTPLLLCEALMGYSALRQCA*FRQQLG
Trigger: CCCCAGCTGCTGTCTAAAGCATGCGCACTGGCGAAG...TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATAGGGGGAAGCCTCCCTaGCACAGTAGAAAGACAGAT +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHRGKPP*HSRKTD
Trigger: ATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCAAGGGGACGTCTGTCTaGTGGCTGTGCCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQIKGTSV*WLCRWL
Trigger: AAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTT...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATCCTGGCTCACACAGATaGATCAGTTCCTATGGGGTC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHPGSHR*ISSYGV
Trigger: GACCCCATAGGAACTGATGCATCTGTGTGAGCCAGG...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGCACTTTCTCATGGTTaGAGCACAGGGTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTALSHG*STGWCV
Trigger: CACACACCACCCTGTGCTGCAACCATGAGAAAGTGC...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTGGTTTCTAACGCGTGCCCCGTaGGGCTCCGGAAATGCTAGA +
Preference number: 4 (lower is better)
Translates to: THGILSNAGAIFVFSQWFLTRAP*GSGNAR
Trigger: TCTAGCATTTCCGGAGCCCCACGGGGCACGCGTTAG...AAACCACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGTTCGTCTTTTCTCAGTaGTTTCCTAACGCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HHCVVHVYSFVALRSTHGFVFSQ*FPNACP
Trigger: GGGGCACGCGTTAGGAAACCACTGAGAAAAGACGAA...CCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVADTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCAAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LTPLRCSRLLLCCSAKHSSLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...TGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAGCTTTAGACAGCAGCTaGGGGCAGTCGACAGACCAG +
Preference number: 4 (lower is better)
Translates to: LFTSTPLLLCEALMGYSAALDSS*GQSTDQ
Trigger: CTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGC...TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGGGACCATCTTTCTTTTaGCTAAAGGGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: HHCVVHVYSFVALRSTHGGPSFF*LKGEAS
Trigger: GGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCC...CCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTTGAAAGGAAGACCCTaGAAGAACAACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLLKGRP*KNNTSF
Trigger: GAAGGAGGTGTTGTTCTTCCAGGGTCTTCCTTTCAA...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAATCAGAGGAGCACACTaGAGGTTTAGGAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGAIRGAH*RFRRQT
Trigger: GGTTTGCCTCCTAAACCTCCAGTGTGCTCCTCTGAT...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGTGGGCACTAGGACTCTaGGACAATGGGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLWALGL*DNGLFK
Trigger: CTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCA...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAGAGTGTGCGCAAAGCTaGGCTGTGCCCAGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLECAQS*AVPSPF
Trigger: GAAGGGGCTGGGCACAGCCCAGCTTTGCGCACACTC...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCTTGATTTTTGCTAACTaGGGTGAGAAGGGATTTTAC +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFLIFAN*GEKGFY
Trigger: GTAAAATCCCTTCTCACCCCAGTTAGCAAAAATCAA...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACTTAATGGCTTGTTGGTaGATAAGACGGCATCAACTT +
Preference number: 4 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDLMACW*IRRHQL
Trigger: AAGTTGATGCCGTCTTATCCACCAACAAGCCATTAA...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTTTCTTCCTCATAAGTaGCATATGGACACCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLFLPHK*HMDTPS
Trigger: ACTGGGGGTGTCCATATGCCACTTATGAGGAAGAAA...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTAGCGCTTCTATAGCATaGGACTGTGGAAACAGACAT +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVSASIA*DCGNRH
Trigger: ATGTCTGTTTCCACAGTCTCATGCTATAGAAGCGCT...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLTQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCCGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: SRLLLCCSAKHSWDTQQRRLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...GCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCCTCTGGCTTCGCCAGTaGGCATGCTTTAGACAGCAG +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQILWLRQ*ACFRQQ
Trigger: CTGCTGTCTAAAGCATGCGCACTGGCGAAGCCAGAG...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCTTCAGTGAGTCGTTTTaGCCCCGGAAGGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQIFSESF*PRKARH
Trigger: GTGTCTGGCCTTCCGGGGGCAAAACGACTCACTGAA...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGTCATTTTCCAGGAGATaGAAAATCACCCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLSFSRR*KITLSP
Trigger: CGGAGACAGGGTGATTTTGCATCTCCTGGAAAATGA...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGAGAGGGAATTTATGTaGAGACTAGAGCCCTGGATG +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGAEREFM*RLEPWM
Trigger: CATCCAGGGCTCTAGTCTGCACATAAATTCCCTCTC...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCTTCCTGGGAGGAGGAGAGGTTTTCCGGCAGGGAGTGGGCTCCGGACCATCTTGGATATTCACATTCATaGATTACGTATCTCACACTA +
Preference number: 4 (lower is better)
Translates to: ASWEEERFSGREWAPDHLGYSHS*ITYLTL
Trigger: TAGTGTGAGATACGTAATGCATGAATGTGAATATCC...AAGATGGTCCGGAGCCCACTCCCTGCCGGAAAACCTCTCCTCCTCCCAGGAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGATATTCACATTCATaGATTACGTATCTCACACTA +
Preference number: 4 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPGYSHS*ITYLTL
Trigger: TAGTGTGAGATACGTAATGCATGAATGTGAATATCC...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACTCTGCGAAGCACTCATaGGATACTCAGCAACGCTGG +
Preference number: 4 (lower is better)
Translates to: VHVYSFVALRSTHGILSNSAKHS*DTQQRW
Trigger: CCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA...GTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCAGGACCATCTTTCTTTTaGCTAAAGGGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: LTPLRCSRLLLCCSAKHSGPSFF*LKGEAS
Trigger: GGAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCC...TGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCTTCGTCTTTTCTCAGTaGTTTCCTTTTTATGGCTTT +
Preference number: 4 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFFVFSQ*FPFYGF
Trigger: AAAGCCATAAAAAGGAAACCACTGAGAAAAGACGAA...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCTTTTCCGGCAGGGAGTaGGCTCCGGACCATCTTTCT +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQIFSGRE*APDHLS
Trigger: AGAAAGATGGTCCGGAGCCCACTCCCTGCCGGAAAA...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAGGGACGTCTGTCTGCTaGCTGTGCCGATGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLGTSVC*LCRWLL
Trigger: CAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCC...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATATCAGAGGAGCACACTaGAGGTTTAGGAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHIRGAH*RFRRQT
Trigger: GGTTTGCCTCCTAAACCTCCAGTGTGCTCCTCTGAT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTATCAGAGGAGCACACTaGAGGTTTAGGAGGCAAACC +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVIRGAH*RFRRQT
Trigger: GGTTTGCCTCCTAAACCTCCAGTGTGCTCCTCTGAT...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTTGGGCACTAGGACTCTaGGACAATGGGCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIWALGL*DNGLFK
Trigger: CTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCA...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAGTCAGGAGCAGGGGGTaGCACTATGCTGATGCCCAG +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLVRSRG*HYADAQ
Trigger: CTGGGCATCAGCATAGTGCCACCCCCTGCTCCTGAC...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATGCAGACTAGAGCCCTaGATGCGTCAGCGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLCRLEP*MRQRLR
Trigger: CCTGAGCCGCTGACGCATCCAGGGCTCTAGTCTGCA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCACCTTAATGGCTTGTTaGTGGATAAGACGGCATCAA +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVATLMAC*WIRRHQ
Trigger: TTGATGCCGTCTTATCCACCAACAAGCCATTAAGGT...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CAA 72 bp ACTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATGGGATACTCAGCAACG +
Preference number: 4 (lower is better)
Translates to: THTTALFTSTPL*LCEALMGYSAT
Trigger: CGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
3UTR CAA 72 bp CAGACTCACACCACTGCGTTGTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTCATGGGATACTCAGCA +
Preference number: 4 (lower is better)
Translates to: QTHTTALFTSTP*LLCEALMGYSA
Trigger: TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR TCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCCTTCTGTTGAGAATGTaGACAGTGGAGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQILLLRM*TVEQAG
Trigger: GCCTGCCTGCTCCACTGTTCACATTCTCAACAGAAG...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTAGCGCTTCTATAGCATaGGACTGTGGAAACAGACAT +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQISASIA*DCGNRH
Trigger: ATGTCTGTTTCCACAGTCTCATGCTATAGAAGCGCT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTGTACATTTGCCCATTaGGAGAACTCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHCTFAH*ENSQEQ
Trigger: TTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATAGTGGAACCATTCAATaGATTGGGCTCCTTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHSGTIQ*IGLLLS
Trigger: GCTCAGAAGGAGCCCAATGCATTGAATGGTTCCACT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCGCACTTTCTCATGGTTaGAGCACAGGGTGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQIALSHG*STGWCV
Trigger: CACACACCACCCTGTGCTGCAACCATGAGAAAGTGC...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATATCAACTTGTACATTTaGCCATTGAGAGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHINLYI*PLRELP
Trigger: TGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGAT...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTATCAACTTGTACATTTaGCCATTGAGAGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: LPATVERQIPLASPVRMLINLYI*PLRELP
Trigger: TGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGAT...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCAGAGGGCTCCCTAGATaGCATGGTTCCTTTTTATGG +
Preference number: 4 (lower is better)
Translates to: SRLLLCCSAKHSWDTQQRRGLPR*HGSFLW
Trigger: CCATAAAAAGGAACCATGCCATCTAGGGAGCCCTCT...GCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp CACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: HHCVVHVYSFVALRSTHGDTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...CCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp GAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: EALMGYSATLVPFSSFLSSLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...ACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAAGCCTGGGAAGACAATaGTTTCTCCTTCGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LFTSTPLLLCEALMGYSASLGRQ*FLLREA
Trigger: AGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCT...TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTTTCGTCTTTTCTCAGTaGTTTCCTTTTTATGGCTTT +
Preference number: 4 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPFVFSQ*FPFYGF
Trigger: AAAGCCATAAAAAGGAAACCACTGAGAAAAGACGAA...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAACTCACAGCCCTCCATaGCAGGCAGTCAGGAGCCTA +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLTHSPP*QAVRSL
Trigger: TAGGCTCCTGACTGCCTGCCATGGAGGGCTGTGAGT...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCAAGGTTCGGCCCAAATaGGGACCGGTTTTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQIKVRPK*GPVFRC
Trigger: ACACCTGAAAACCGGTCCCCATTTGGGCCGAACCTT...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAACACAGACAGCTCCGTaGGCACTAGGACTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLTQTAP*ALGLWD
Trigger: GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCAAGAAAACCCCTTTATaGGAGGGTATGCCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQIKKTPL*EGMPWA
Trigger: GGCCCAGGGCATACCCTCCCATAAAGGGGTTTTCTT...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATGTGGGAAGCACCTTTaGAAGGGGACGTCTGTCTGC +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLCGKHL*KGTSVC
Trigger: GCAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCACTAGGCTCTTCCCTTaGTTTTTGCTAACTGGGGTG +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVTRLFP*FLLTGV
Trigger: CACCCCAGTTAGCAAAAATCAAGGGAAGAGCCTAGT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCACGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: LFTSTPLLLCEALMGYSARLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR GCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATTCAGTGAGTCGTTTTaGCCCCGGAAGGCCAGACAC +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLFSESF*PRKARH
Trigger: GTGTCTGGCCTTCCGGGGGCAAAACGACTCACTGAA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATTTCCCCCTTTAACCTaGTGCTGGCCCACACCCTCT +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLFPPLT*CWPTPS
Trigger: AGAGGGTGTGGGCCAGCAGCAGGTTAAAGGGGGAAA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTGGATATTCACATTCATaGATTACGTATCTCACACTA +
Preference number: 4 (lower is better)
Translates to: PSPPVPFHPLILQPRWRAGYSHS*ITYLTL
Trigger: TAGTGTGAGATACGTAATGCATGAATGTGAATATCC...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAGAGGCAATGAAGTCCTaGACAAGCTCAGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: LFTSTPLLLCEALMGYSAEAMKS*TSSGLA
Trigger: AGCTAACCCTGAGCTTGTCCAGGACTTCATTGCCTC...TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTTGAAAGGAAGACCCTaGAAGAACAACACCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHLKGRP*KNNTSF
Trigger: GAAGGAGGTGTTGTTCTTCCAGGGTCTTCCTTTCAA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTAGGCCTATTTGTCAGCTaGCTCCGCACCTCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLGLFVS*LRTSRA
Trigger: TGCTCTTGAGGTGCGGAGCCAGCTGACAAATAGGCC...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCTTGATTTTTGCTAACTaGGGTGAGAAGGGATTTTAC +
Preference number: 4 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVALIFAN*GEKGFY
Trigger: GTAAAATCCCTTCTCACCCCAGTTAGCAAAAATCAA...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTTTAATGGCTTGTTGGTaGATAAGACGGCATCAACTT +
Preference number: 4 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVLMACW*IRRHQL
Trigger: AAGTTGATGCCGTCTTATCCACCAACAAGCCATTAA...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CAA 72 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTaGCTAAGAAGGCAGATTTCAGGATATTCACATTCA +
Preference number: 4 (lower is better)
Translates to: RSNCPLSSTRGT*LRRQISGYSHS
Trigger: TGAATGTGAATATCCTGAAATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTACTTCTGTTGAGAATGTaGACAGTGGAGCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLLLLRM*TVEQAG
Trigger: GCCTGCCTGCTCCACTGTTCACATTCTCAACAGAAG...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCTTTTACAAGCCCAGCTaGGAGGGAATTTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVFYKPS*EGIYVQ
Trigger: CTGCACATAAATTCCCTCTCAGCTGGGCTTGTAAAA...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTACCTGGCTCACACAGATaGATCAGTTCCTATGGGGTC +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLPGSHR*ISSYGV
Trigger: GACCCCATAGGAACTGATGCATCTGTGTGAGCCAGG...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCAGAGGGCTCCCTAGATaGCATGGTTCCTTTTTATGG +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQIRGLPR*HGSFLW
Trigger: CCATAAAAAGGAACCATGCCATCTAGGGAGCCCTCT...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTATTCGTCTTTTCTCAGTaGTTTCCTTTTTATGGCTTT +
Preference number: 4 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLFVFSQ*FPFYGF
Trigger: AAAGCCATAAAAAGGAAACCACTGAGAAAAGACGAA...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTACGGGGTAGGGTAAAATaGGGAGATGATGGAGGACTC +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLRGRVK*GDDGGL
Trigger: GAGTCCTCCATCATCTCCCCATTTTACCCTACCCCG...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCACTCAGCAACGCTGGTaGCATTTTCGTCTTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IFLLAKGGSLPATVERQITQQRW*HFRLFS
Trigger: TGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGT...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR GCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTACGTCTACTCCTTTGTTaGTCTGCGAAGCACTCATGG +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLRLLLC*SAKHSW
Trigger: CCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACG...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTATCAACTTGTACATTTaGCCATTGAGAGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVINLYI*PLRELP
Trigger: TGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGAT...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp AAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTGGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTC +
Preference number: 4 (lower is better)
Translates to: KHSWDTQQRWCHFRLFSVDTQQR*CHFRLF
Trigger: GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATC...CACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CCA 90 bp GATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCATTGATTTTTGCTAACTaGGGTGAGAAGGGATTTTAC +
Preference number: 4 (lower is better)
Translates to: DASVPMGSSVGMSLRTGALIFAN*GEKGFY
Trigger: GTAAAATCCCTTCTCACCCCAGTTAGCAAAAATCAA...TGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTTTAATGGCTTGTTGGTaGATAAGACGGCATCAACTT +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVLMACW*IRRHQL
Trigger: AAGTTGATGCCGTCTTATCCACCAACAAGCCATTAA...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTTAATGGCTTGTTGGTaGATAAGACGGCATCAACTT +
Preference number: 4 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHLMACW*IRRHQL
Trigger: AAGTTGATGCCGTCTTATCCACCAACAAGCCATTAA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCACCTTAATGGCTTGTTaGTGGATAAGACGGCATCAA +
Preference number: 4 (lower is better)
Translates to: DGINLYICPLRELPGATVTLMAC*WIRRHQ
Trigger: TTGATGCCGTCTTATCCACCAACAAGCCATTAAGGT...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATGTACATTTGCCCATTaGGAGAACTCCCAGGAGCAA +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLCTFAH*ENSQEQ
Trigger: TTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACATTGATTTTTGCTAACTaGGGTGAGAAGGGATTTTAC +
Preference number: 4 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTLIFAN*GEKGFY
Trigger: GTAAAATCCCTTCTCACCCCAGTTAGCAAAAATCAA...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR TCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATTTTACAAGCCCAGCTaGGAGGGAATTTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLFYKPS*EGIYVQ
Trigger: CTGCACATAAATTCCCTCTCAGCTGGGCTTGTAAAA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR GCA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGGATATTCACATTCATaGATTACGTATCTCACACTA +
Preference number: 4 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVGYSHS*ITYLTL
Trigger: TAGTGTGAGATACGTAATGCATGAATGTGAATATCC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CCA 90 bp TATGATCTGAGTTCCAAAGTTGGGGTCAACTGTGAGACGGCTGGAAAAGATCTATTCGTCTTTTCTCAGTaGTTTCCTTTTTATGGCTTT +
Preference number: 4 (lower is better)
Translates to: YDLSSKVGVNCETAGKDLFVFSQ*FPFYGF
Trigger: AAAGCCATAAAAAGGAAACCACTGAGAAAAGACGAA...TAGATCTTTTCCAGCCGTCTCACAGTTGACCCCAACTTTGGAACTCAGATCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
3UTR CAA 72 bp CGTATCTCACACTACCTGGGCAGTTTAACTCATACTTaGTACAGATGCAGAGAGTACAGTAGTTGTATTTAT +
Preference number: 4 (lower is better)
Translates to: RISHYLGSLTHT*YRCREYSSCIY
Trigger: ATAAATACAACTACTGTACTCTCTGCATCTGTACAAAGTATGAGTTAAACTGCCCAGGTAGTGTGAGATACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGGCTCCTGGGGCGAACTaGCCTGGCGGCGGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: APGSAWCPSCLGPQADQGAPGAN*PGGGPS
Trigger: GCTGGGGCCGCCGCCAGGCAAGTTCGCCCCAGGAGC...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393140.6
ENST00000629961.2
CDS-3UTR CAA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGCACCCTCTGGCCTATTaGTCAGCTGGCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: APGSAWCPSCLGPQADQGHPLAY*SAGSAP
Trigger: AGGTGCGGAGCCAGCTGACAAATAGGCCAGAGGGTG...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS GCA 90 bp CCATGCGTCACCTGCACGAAGCCCCAGAGCGGGTGGAGCGCGCAGTaGAGCAGCAGCGAGGACCAGCAGCAGCCACGGCGCAGCACCAAG +
Preference number: 5 (lower is better)
Translates to: PCVTCTKPQSGWSAQ*SSSEDQQQPRRSTK
Trigger: CTTGGTGCTGCGCCGTGGCTGCTGCTGGTCCTCGCTGCTGCTGCACTGCGCGCTCCACCCGCTCTGGGGCTTCGTGCAGGTGACGCATGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTGCTCCTGGGGCGAACTaGCCTGGCGGCGGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGAPGAN*PGGGPS
Trigger: GCTGGGGCCGCCGCCAGGCAAGTTCGCCCCAGGAGC...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393140.6
ENST00000629961.2
CDS-3UTR CAA 90 bp GGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGTGGGCAAGAGGTAGAGTaGGGAGCTGGGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: GVPLASGSRACRLTPLRCGQEVE*GAGAER
Trigger: CCTCTCCGCCCCAGCTCCCAACTCTACCTCTTGCCC...ACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp GCGCCGGGCTCAGCCTGGTGTCCGAGCTGCCTGGGCCCGCAGGCTGACCAGGGGACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 5 (lower is better)
Translates to: APGSAWCPSCLGPQADQGTSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...CCCCTGGTCAGCCTGCGGGCCCAGGCAGCTCGGACACCAGGCTGAGCCCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCAGGGAAGGCTGCCACTaGGGAGACAGGCCAACAGGG +
Preference number: 5 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSREGCH*GDRPTG
Trigger: CCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCCT...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCAGCTGTCAGTCACTTaGGAGCAGGACTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGQLSVT*EQDFWG
Trigger: GCCCCAGAAGTCCTGCTCCAAAGTGACTGACAGCTG...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACGGGCAAGAGGTAGAGTaGGGAGCTGGGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDGQEVE*GAGAER
Trigger: CCTCTCCGCCCCAGCTCCCAACTCTACCTCTTGCCC...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGGGCAAGAGGTAGAGTaGGGAGCTGGGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPGQEVE*GAGAER
Trigger: CCTCTCCGCCCCAGCTCCCAACTCTACCTCTTGCCC...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGCACCCTCTGGCCTATTaGTCAGCTGGCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: STCFPMSTSATKVSLWPAHPLAY*SAGSAP
Trigger: AGGTGCGGAGCCAGCTGACAAATAGGCCAGAGGGTG...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGGCAAGAGGTAGAGTaGGGAGCTGGGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHGQEVE*GAGAER
Trigger: CCTCTCCGCCCCAGCTCCCAACTCTACCTCTTGCCC...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGTCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: GVPLASGSRACRLTPLRCRTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...ACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGGTGTGGGAAGCACCTTaGAAAGGGGACGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQVWEAP*KGDVCL
Trigger: CAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACAC...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCAGGCCCACAGTGGATTaGGCACAAGTAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSRPTVD*AQVVAS
Trigger: AGAGGCCACTACTTGTGCCAAATCCACTGTGGGCCT...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGCACCCTCTGGCCTATTaGTCAGCTGGCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRHPLAY*SAGSAP
Trigger: AGGTGCGGAGCCAGCTGACAAATAGGCCAGAGGGTG...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGTGTCCCTCTGGCCAGCGGGTCCAGGGCCTGCAGACTCACACCACTGCGTTGTACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 5 (lower is better)
Translates to: GVPLASGSRACRLTPLRCTSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...ACAACGCAGTGGTGTGAGTCTGCAGGCCCTGGACCCGCTGGCCAGAGGGACACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGRTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGTGTGGGAAGCACCTTaGAAAGGGGACGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSVWEAP*KGDVCL
Trigger: CAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACAC...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCTGCTTAGGGCACAGCTaGGGGGTTCAACAGGCACCA +
Preference number: 5 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLCLGHS*GVQQAP
Trigger: TGGTGCCTGTTGAACCCCCAAGCTGTGCCCTAAGCA...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGCACTTTCTCATGGTaGCAGCACAGGGTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSGTFSW*QHRVVC
Trigger: ACACACCACCCTGTGCTGCAACCATGAGAAAGTGCC...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 5 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSTSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 5 (lower is better)
Translates to: GPQADQGQAWEDNGFSFGTSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...CCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: TCFPMSTSATKVSLWPAGRTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...ACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACGTCCCATTTCATCCCTaGATCCTCCAACCACGCTGG +
Preference number: 5 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDVPFHP*ILQPRW
Trigger: CCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGAC...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTACACCCTCTGGCCTATTaGTCAGCTGGCTCCGCACCT +
Preference number: 5 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLHPLAY*SAGSAP
Trigger: AGGTGCGGAGCCAGCTGACAAATAGGCCAGAGGGTG...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ATGTCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCATGCTTAGGGCACAGCTaGGGGGTTCAACAGGCACCA +
Preference number: 5 (lower is better)
Translates to: MSTCFPMSTSATKVSLWPCLGHS*GVQQAP
Trigger: TGGTGCCTGTTGAACCCCCAAGCTGTGCCCTAAGCA...TGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGGGCACTTTCTCATGGTaGCAGCACAGGGTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRGTFSW*QHRVVC
Trigger: ACACACCACCCTGTGCTGCAACCATGAGAAAGTGCC...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTGGGCAAGAGGTAGAGTaGGGAGCTGGGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVGQEVE*GAGAER
Trigger: CCTCTCCGCCCCAGCTCCCAACTCTACCTCTTGCCC...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGGCAAGAGGTAGAGTaGGGAGCTGGGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTGQEVE*GAGAER
Trigger: CCTCTCCGCCCCAGCTCCCAACTCTACCTCTTGCCC...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CTCACACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCAGGGCAAGAGGTAGAGTaGGGAGCTGGGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LTPLRCSRLLLCCSAKHSGQEVE*GAGAER
Trigger: CCTCTCCGCCCCAGCTCCCAACTCTACCTCTTGCCC...TGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp CTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: LGPQADQGQAWEDNGFSFTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...GAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRRTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGTGTGGGAAGCACCTTaGAAAGGGGACGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: SLPATVERQIPLASPVRMVWEAP*KGDVCL
Trigger: CAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACAC...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGGTGTGGGAAGCACCTTaGAAAGGGGACGTCTGTCTG +
Preference number: 5 (lower is better)
Translates to: DTAPECKRTPVSAQEGILVWEAP*KGDVCL
Trigger: CAGACAGACGTCCCCTTTCAAAGGTGCTTCCCACAC...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGGTCCCATTTCATCCCTaGATCCTCCAACCACGCTGG +
Preference number: 5 (lower is better)
Translates to: SLPATVERQIPLASPVRMVPFHP*ILQPRW
Trigger: CCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGAC...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTAGGGAAGGCTGCCACTaGGGAGACAGGCCAACAGGG +
Preference number: 5 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIREGCH*GDRPTG
Trigger: CCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCCT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACAGGTGCAGTGGCCTGCTTAGGGCACAGCTaGGGGGTTCAACAGGCACCA +
Preference number: 5 (lower is better)
Translates to: SVPMGSSVGMSLRTGAVACLGHS*GVQQAP
Trigger: TGGTGCCTGTTGAACCCCCAAGCTGTGCCCTAAGCA...GGCCACTGCACCTGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGCCTGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCAAGTGCATTTCATTCTaGACCTCAGGGCTCGGACTA +
Preference number: 5 (lower is better)
Translates to: CLGPQADQGQAWEDNGFSKCISF*TSGLGL
Trigger: TAGTCCGAGCCCTGAGGTCAAGAATGAAATGCACTT...GGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAAGTACACGCGGCACGTaGCTAAGAAGGCAGATTTCA +
Preference number: 5 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPSTRGT*LRRQIS
Trigger: TGAAATCTGCCTTCTTAGCAACGTGCCGCGTGTACT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCAGCTGTCAGTCACTTaGGAGCAGGACTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLQLSVT*EQDFWG
Trigger: GCCCCAGAAGTCCTGCTCCAAAGTGACTGACAGCTG...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GAAGCACCTTTGAAAGGGGACGTCTGTCTGCTGGCTGTGCCGATGGCTTCTGTTCAGCTGTCAGTCACTTaGGAGCAGGACTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: EAPLKGDVCLLAVPMASVQLSVT*EQDFWG
Trigger: GCCCCAGAAGTCCTGCTCCAAAGTGACTGACAGCTG...AACAGAAGCCATCGGCACAGCCAGCAGACAGACGTCCCCTTTCAAAGGTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CCTGGGCAGGACAATGACACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: PGQDNDTQTAPWALGLWDTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...GTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGTGTCATTGTCCTGCCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGTCCCATTTCATCCCTaGATCCTCCAACCACGCTGG +
Preference number: 5 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHVPFHP*ILQPRW
Trigger: CCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGAC...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAGGCACTTTCTCATGGTaGCAGCACAGGGTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLGTFSW*QHRVVC
Trigger: ACACACCACCCTGTGCTGCAACCATGAGAAAGTGCC...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGTCTAGTGGGTCTCCCTaGCTGTGCCGTATACTTGTT +
Preference number: 5 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRSSGSP*LCRILV
Trigger: AACAAGTATACGGCACAGCAAGGGAGACCCACTAGA...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TCCACCTGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGAAGTGCATTTCATTCTaGACCTCAGGGCTCGGACTA +
Preference number: 5 (lower is better)
Translates to: STCFPMSTSATKVSLWPAKCISF*TSGLGL
Trigger: TAGTCCGAGCCCTGAGGTCAAGAATGAAATGCACTT...CGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCAGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCATTGTACATTTGCCCATaGAGAGAACTCCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPLYICP*RELPGA
Trigger: TGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAA...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAGCATCAACTTGTACATTaGCCCATTGAGAGAACTCCC +
Preference number: 5 (lower is better)
Translates to: AFPCPPVPPRCPSGQRVQHQLVH*PIERTP
Trigger: GGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATG...CTGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGCTTTCCCATGTCCACCAGTGCCACCAAGGTGTCCCTCTGGCCAGCGGGTCCAACCAACCTTAATGGCTaGTTGGTGGATAAGACGGCA +
Preference number: 5 (lower is better)
Translates to: CFPMSTSATKVSLWPAGPTNLNG*LVDKTA
Trigger: TGCCGTCTTATCCACCAACAAGCCATTAAGGTTGGT...TGGACCCGCTGGCCAGAGGGACACCTTGGTGGCACTGGTGGACATGGGAAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGCAGCTGTCAGTCACTTaGGAGCAGGACTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: HHCVVHVYSFVALRSTHGQLSVT*EQDFWG
Trigger: GCCCCAGAAGTCCTGCTCCAAAGTGACTGACAGCTG...CCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp CCCTCTCCTCCTGTCCCATTTCATCCCTTGATCCTCCAACCACGCTGGAGGGCTACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 5 (lower is better)
Translates to: PSPPVPFHPLILQPRWRATSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...AGCCCTCCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGACAGGAGGAGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 5 (lower is better)
Translates to: PPCHSRKTDPSGFASAHATSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ACCAAGAAGAGGCATTTCCACCCTGGTCCAGGCAGAGATGGCCACAGAGGGCTCTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: TKKRHFHPGPGRDGHRGLFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...GAGCCCTCTGTGGCCATCTCTGCCTGGACCAGGGTGGAAATGCCTCTTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp ACCAAGAAGAGGCATTTCCACCCTGGTCCAGGCAGAGATGGCCACAGAGGGCTCACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: TKKRHFHPGPGRDGHRGLTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...GAGCCCTCTGTGGCCATCTCTGCCTGGACCAGGGTGGAAATGCCTCTTCTTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp TGTCTCCGTGGGTTTCCTGATGTGGCCCACAGGGAAGGCTGCCACTTGGGAGACCCGTATACTTGTTTTTaGAATGGGCGGTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: CLRGFPDVAHREGCHLGDPYTCF*NGRSWA
Trigger: AGCCCAAGACCGCCCATTCAAAAAACAAGTATACGG...GTCTCCCAAGTGGCAGCCTTCCCTGTGGGCCACATCAGGAAACCCACGGAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGTCTAGTGGGTCTCCCTaGCTGTGCCGTATACTTGTT +
Preference number: 5 (lower is better)
Translates to: SLPATVERQIPLASPVRMSSGSP*LCRILV
Trigger: AACAAGTATACGGCACAGCAAGGGAGACCCACTAGA...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGAGTACACGCGGCACGTaGCTAAGAAGGCAGATTTCA +
Preference number: 5 (lower is better)
Translates to: DTAPECKRTPVSAQEGILSTRGT*LRRQIS
Trigger: TGAAATCTGCCTTCTTAGCAACGTGCCGCGTGTACT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGAGTACACGCGGCACGTaGCTAAGAAGGCAGATTTCA +
Preference number: 5 (lower is better)
Translates to: SLPATVERQIPLASPVRMSTRGT*LRRQIS
Trigger: TGAAATCTGCCTTCTTAGCAACGTGCCGCGTGTACT...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TGGGCCCGCAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGAACCTTAATGGCTTGTaGGTGGATAAGACGGCATCA +
Preference number: 5 (lower is better)
Translates to: WARRLTRGKPGKTMVSPSNLNGL*VDKTAS
Trigger: TGATGCCGTCTTATCCACCAACAAGCCATTAAGGTT...CGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTGCGGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCACCAACCTTAATGGCTaGTTGGTGGATAAGACGGCA +
Preference number: 5 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLTNLNG*LVDKTA
Trigger: TGCCGTCTTATCCACCAACAAGCCATTAAGGTTGGT...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCCAGCTGTCAGTCACTTaGGAGCAGGACTTCTGGGGC +
Preference number: 5 (lower is better)
Translates to: SRLLLCCSAKHSWDTQQRQLSVT*EQDFWG
Trigger: GCCCCAGAAGTCCTGCTCCAAAGTGACTGACAGCTG...GCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp ACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTGGTTTGGGCAAGAGGTAGAGTaGGGAGCTGGGGCGGAGAGG +
Preference number: 5 (lower is better)
Translates to: THGILSNAGAIFVFSQWFGQEVE*GAGAER
Trigger: CCTCTCCGCCCCAGCTCCCAACTCTACCTCTTGCCC...AAACCACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 5 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHTSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: LPATVERQIPLASPVRMLFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...AAGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLRTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTAGGCCCACAGTGGATTaGGCACAAGTAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQIRPTVD*AQVVAS
Trigger: AGAGGCCACTACTTGTGCCAAATCCACTGTGGGCCT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCAGGGAAGGCTGCCACTaGGGAGACAGGCCAACAGGG +
Preference number: 5 (lower is better)
Translates to: IFLLAKGGSLPATVERQIREGCH*GDRPTG
Trigger: CCCTGTTGGCCTGTCTCCCAAGTGGCAGCCTTCCCT...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTGCTTAGGGCACAGCTaGGGGGTTCAACAGGCACCA +
Preference number: 5 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHCLGHS*GVQQAP
Trigger: TGGTGCCTGTTGAACCCCCAAGCTGTGCCCTAAGCA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTAAGTGCATTTCATTCTaGACCTCAGGGCTCGGACTA +
Preference number: 5 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAKCISF*TSGLGL
Trigger: TAGTCCGAGCCCTGAGGTCAAGAATGAAATGCACTT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GACACTGCCCCCGAGTGTAAACGCACTCCTGTGTCTGCTCAGGAGGGGATTCTGAAGTGCATTTCATTCTaGACCTCAGGGCTCGGACTA +
Preference number: 5 (lower is better)
Translates to: DTAPECKRTPVSAQEGILKCISF*TSGLGL
Trigger: TAGTCCGAGCCCTGAGGTCAAGAATGAAATGCACTT...CAGAATCCCCTCCTGAGCAGACACAGGAGTGCGTTTACACTCGGGGGCAGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTTTGTACATTTGCCCATaGAGAGAACTCCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: PPCHSRKTDPSGFASAHALYICP*RELPGA
Trigger: TGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAA...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CAGGCTGACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAACCTTAATGGCTTGTaGGTGGATAAGACGGCATCA +
Preference number: 5 (lower is better)
Translates to: QADQGQAWEDNGFSFGRLNLNGL*VDKTAS
Trigger: TGATGCCGTCTTATCCACCAACAAGCCATTAAGGTT...GAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGTCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGGCCCCAAAACGTGGTGATGGCTCAGCTGATTCCTCACCAGGGAGCCTCGCCTAACCTTAATGGCTTGTaGGTGGATAAGACGGCATCA +
Preference number: 5 (lower is better)
Translates to: RPQNVVMAQLIPHQGASPNLNGL*VDKTAS
Trigger: TGATGCCGTCTTATCCACCAACAAGCCATTAAGGTT...AGGCGAGGCTCCCTGGTGAGGAATCAGCTGAGCCATCACCACGTTTTGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTACCAACCTTAATGGCTaGTTGGTGGATAAGACGGCA +
Preference number: 5 (lower is better)
Translates to: PPCHSRKTDPSGFASAHATNLNG*LVDKTA
Trigger: TGCCGTCTTATCCACCAACAAGCCATTAAGGTTGGT...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGTGCGCATGCTTTAGACAGCAGCTGGGGGCAGTCGACAGACCAGACACCAGACACCAACCTTAATGGCTaGTTGGTGGATAAGACGGCA +
Preference number: 5 (lower is better)
Translates to: SAHALDSSWGQSTDQTPDTNLNG*LVDKTA
Trigger: TGCCGTCTTATCCACCAACAAGCCATTAAGGTTGGT...GTCTGGTGTCTGGTCTGTCGACTGCCCCCAGCTGCTGTCTAAAGCATGCGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATAGGCCCACAGTGGATTaGGCACAAGTAGTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHRPTVD*AQVVAS
Trigger: AGAGGCCACTACTTGTGCCAAATCCACTGTGGGCCT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATGTCCCATTTCATCCCTaGATCCTCCAACCACGCTGG +
Preference number: 5 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHVPFHP*ILQPRW
Trigger: CCAGCGTGGTTGGAGGATCAAGGGATGAAATGGGAC...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTACCGTATACTTGTTTTTaGAATGGGCGGTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLPYTCF*NGRSWA
Trigger: AGCCCAAGACCGCCCATTCAAAAAACAAGTATACGG...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGTCTAGTGGGTCTCCCTaGCTGTGCCGTATACTTGTT +
Preference number: 5 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLSSGSP*LCRILV
Trigger: AACAAGTATACGGCACAGCAAGGGAGACCCACTAGA...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATTTGTACATTTGCCCATaGAGAGAACTCCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHLYICP*RELPGA
Trigger: TGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAA...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCATCAACTTGTACATTaGCCCATTGAGAGAACTCCC +
Preference number: 5 (lower is better)
Translates to: SLPATVERQIPLASPVRMHQLVH*PIERTP
Trigger: GGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATG...CATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATGCTCATCAACTTGTACATTaGCCCATTGAGAGAACTCCC +
Preference number: 5 (lower is better)
Translates to: PPCHSRKTDPSGFASAHAHQLVH*PIERTP
Trigger: GGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATG...AGCATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCTAAGAAGGCAGATTACGTCTACTCCTTTGTaGCTCTGCGAAGCACTCATG +
Preference number: 5 (lower is better)
Translates to: RSNCPLSSTRGTLLRRQITSTPL*LCEALM
Trigger: CATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGT...AATCTGCCTTCTTAGCAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CACCACTGCGTTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: HHCVVHVYSFVALRSTHGFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...CCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAACGCAGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACACGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTRTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GACGGCATCAACTTGTACATTTGCCCATTGAGAGAACTCCCAGGAGCAACTGTCGGCACTTTCTCATGGTaGCAGCACAGGGTGGTGTGT +
Preference number: 5 (lower is better)
Translates to: DGINLYICPLRELPGATVGTFSW*QHRVVC
Trigger: ACACACCACCCTGTGCTGCAACCATGAGAAAGTGCC...GACAGTTGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATGCCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ATTGAGAGAACTCCCAGGAGCAACTGTCCTCTCTCCAGTACACGCGGCACGTTGCCGTATACTTGTTTTTaGAATGGGCGGTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: IERTPRSNCPLSSTRGTLPYTCF*NGRSWA
Trigger: AGCCCAAGACCGCCCATTCAAAAAACAAGTATACGG...CAACGTGCCGCGTGTACTGGAGAGAGGACAGTTGCTCCTGGGAGTTCTCTCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp AAGCCTCCCTGCCACAGTAGAAAGACAGATCCCTCTGGCTTCGCCAGTGCGCATAACCTTAATGGCTTGTaGGTGGATAAGACGGCATCA +
Preference number: 5 (lower is better)
Translates to: KPPCHSRKTDPSGFASAHNLNGL*VDKTAS
Trigger: TGATGCCGTCTTATCCACCAACAAGCCATTAAGGTT...ATGCGCACTGGCGAAGCCAGAGGGATCTGTCTTTCTACTGTGGCAGGGAGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACATTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ACACAGACAGCTCCGTGGGCACTAGGACTCTGGGACAATGGGCTTTTTAAGGTTTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: TQTAPWALGLWDNGLFKVFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...AACCTTAAAAAGCCCATTGTCCCAGAGTCCTAGTGCCCACGGAGCTGTCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TCTGCGAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCCGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: SAKHSWDTQQRWCHFRLFRTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...GAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATTCTAGTGGGTCTCCCTaGCTGTGCCGTATACTTGTT +
Preference number: 5 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHSSGSP*LCRILV
Trigger: AACAAGTATACGGCACAGCAAGGGAGACCCACTAGA...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ACCAGGGGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTAGTTTAACTCATACTTaGTACAGATGCAGAGAGTAC +
Preference number: 5 (lower is better)
Translates to: TRGKPGKTMVSPSGGSGPSLTHT*YRCREY
Trigger: GTACTCTCTGCATCTGTACAAAGTATGAGTTAAACT...AGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCCCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GGCAAGCCTGGGAAGACAATGGTTTCTCCTTCGGGAGGCTCAGGGCCTGTGAGGAGTTTAACTCATACTTaGTACAGATGCAGAGAGTAC +
Preference number: 5 (lower is better)
Translates to: GKPGKTMVSPSGGSGPVRSLTHT*YRCREY
Trigger: GTACTCTCTGCATCTGTACAAAGTATGAGTTAAACT...CCTCACAGGCCCTGAGCCTCCCGAAGGAGAAACCATTGTCTTCCCAGGCTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GCAATGAAGTCCTGGACAAGCTCAGGGTTAGCTCATGTCCACCTGCTTTCCCATAGTACACGCGGCACGTaGCTAAGAAGGCAGATTTCA +
Preference number: 5 (lower is better)
Translates to: AMKSWTSSGLAHVHLLSHSTRGT*LRRQIS
Trigger: TGAAATCTGCCTTCTTAGCAACGTGCCGCGTGTACT...ATGGGAAAGCAGGTGGACATGAGCTAACCCTGAGCTTGTCCAGGACTTCATTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp TTGTTCACGTCTACTCCTTTGTTGCTCTGCGAAGCACTCATGGGATACTCAGCACGGACCATCTTTCTTTaGGCTAAAGGGGGAAGCCTC +
Preference number: 5 (lower is better)
Translates to: LFTSTPLLLCEALMGYSARTIFL*AKGGSL
Trigger: GAGGCTTCCCCCTTTAGCCAAAAGAAAGATGGTCCG...TGCTGAGTATCCCATGAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACACCGTATACTTGTTTTTaGAATGGGCGGTCTTGGGCT +
Preference number: 5 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTPYTCF*NGRSWA
Trigger: AGCCCAAGACCGCCCATTCAAAAAACAAGTATACGG...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACATTGTACATTTGCCCATaGAGAGAACTCCCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTLYICP*RELPGA
Trigger: TGCTCCTGGGAGTTCTCTCAATGGGCAAATGTACAA...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp GAAGCACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTTTCACGTCTACTCCTTaGTTGCTCTGCGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: EALMGYSATLVPFSSFLSFTSTP*LLCEAL
Trigger: GAGTGCTTCGCAGAGCAACAAAGGAGTAGACGTGAA...ACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp TTCGGGAGGCTCAGGGCCTGTGAGGCAATGAAGTCCTGGACAAGCTCAGGGTTAAGTTTAACTCATACTTaGTACAGATGCAGAGAGTAC +
Preference number: 5 (lower is better)
Translates to: FGRLRACEAMKSWTSSGLSLTHT*YRCREY
Trigger: GTACTCTCTGCATCTGTACAAAGTATGAGTTAAACT...TAACCCTGAGCTTGTCCAGGACTTCATTGCCTCACAGGCCCTGAGCCTCCCGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp CACACAGATGCATCAGTTCCTATGGGGTCAAGTGTGGGGATGAGTCTGAGGACACATCAACTTGTACATTaGCCCATTGAGAGAACTCCC +
Preference number: 5 (lower is better)
Translates to: HTDASVPMGSSVGMSLRTHQLVH*PIERTP
Trigger: GGGAGTTCTCTCAATGGGCAAATGTACAAGTTGATG...TGTCCTCAGACTCATCCCCACACTTGACCCCATAGGAACTGATGCATCTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS-3UTR CAA 90 bp ACTCATGGGATACTCAGCAACGCTGGTGCCATTTTCGTCTTTTCTCAGTGGTTTACTCACACCACTGCGTaGTTCACGTCTACTCCTTTG +
Preference number: 5 (lower is better)
Translates to: THGILSNAGAIFVFSQWFTHTTA*FTSTPL
Trigger: CAAAGGAGTAGACGTGAACAACGCAGTGGTGTGAGT...AAACCACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316227.3
ENST00000477603.5
ENST00000617019.3
ENST00000627063.2
CDS-3UTR CAA 90 bp ATCTTTCTTTTGGCTAAAGGGGGAAGCCTCCCTGCCACAGTAGAAAGACAGATCAGTTTAACTCATACTTaGTACAGATGCAGAGAGTAC +
Preference number: 5 (lower is better)
Translates to: IFLLAKGGSLPATVERQISLTHT*YRCREY
Trigger: GTACTCTCTGCATCTGTACAAAGTATGAGTTAAACT...GATCTGTCTTTCTACTGTGGCAGGGAGGCTTCCCCCTTTAGCCAAAAGAAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2
CDS CCA 72 bp TGTCGGCAGCTGTCAGTCACTTTGGAGCAGGACTTCTaGGGCTCACCATGCGTCACCTGCACGAAGCCCCAG +
Preference number: 6 (lower is better)
Translates to: CRQLSVTLEQDF*GSPCVTCTKPQ
Trigger: CTGGGGCTTCGTGCAGGTGACGCATGGTGAGCCCCAGAAGTCCTGCTCCAAAGTGACTGACAGCTGCCGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000316227.3
ENST00000393140.6
ENST00000393143.5
ENST00000477603.5
ENST00000611347.2
ENST00000617019.3
ENST00000627063.2
ENST00000629961.2
CDS CCA 72 bp TGCTCTGCGAAGCACTCATGGGATACTCAGCAACGCTaGTGCCATTTTCGTCTTTTCTCAGTGGTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: CSAKHSWDTQQR*CHFRLFSVVSF
Trigger: AAAGGAAACCACTGAGAAAAGACGAAAATGGCACCAGCGTTGCTGAGTATCCCATGAGTGCTTCGCAGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393140.6
ENST00000393143.5
ENST00000611347.2
ENST00000629961.2