RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRICKLE4 (Homo sapiens)

Ensembl gene IDs: ENSG00000278224

Ensembl transcript IDs: ENST00000359201.6, ENST00000394259.5, ENST00000394260.2, ENST00000458694.6, ENST00000463606.1, ENST00000483200.2

Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CAA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTaGTTCTCCCGCTTTACAGACCCCTTTCCTCCCACTCACATCCCC +
Preference number: 2 (lower is better)
Translates to: RLTASQSRIVRGRLA*FSRFTDPFPPTHIP
Trigger: GGGGATGTGAGTGGGAGGAAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
3UTR-3UTR TCA 90 bp TCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTTTGCGGGCGTGCGCCTaGCTGCGTCTCAGTCTAGGA +
Preference number: 2 (lower is better)
Translates to: SAKSLRTRSTEGGALQTCLRACA*LRLSLG
Trigger: TCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAA...ACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
3UTR-3UTR GCA 90 bp TGGGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGCACCTCGCCGCCTCTTaGGGGCGTGCGCCTGACTGC +
Preference number: 2 (lower is better)
Translates to: WVLPRKSPPKVLERAVLKHLAAS*GRAPDC
Trigger: GCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTG...CTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
3UTR-3UTR CCA 90 bp TTTAATTGGCTTGGGAGGAGGATGGTGGGGACGGGGCTGTCCCAGCCTGTGGAGCGTAGCTTTGGGGAATaGGTTTTGCCAAGAAAGTCT +
Preference number: 2 (lower is better)
Translates to: FNWLGRRMVGTGLSQPVERSFGE*VLPRKS
Trigger: AGACTTTCTTGGCAAAACCCATTCCCCAAAGCTACG...CTCCACAGGCTGGGACAGCCCCGTCCCCACCATCCTCCTCCCAAGCCAATTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458694.6
3UTR TCA 72 bp AACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTaGCTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGC +
Preference number: 3 (lower is better)
Translates to: NLSPRRLLRACA*LRLSLGLLGGG
Trigger: GCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
3UTR CCA 72 bp TGCTGTGATCATTTAATTGGCTTGGGAGGAGGATGGTaGGGACGGGGCTGTCCCAGCCTGTGGAGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: CCDHLIGLGGGW*GRGCPSLWRWG
Trigger: CCCCCACCTCCACAGGCTGGGACAGCCCCGTCCCCACCATCCTCCTCCCAAGCCAATTAAATGATCACAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458694.6
3UTR-3UTR CAA 90 bp GCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACAGGGGGAGGCTAGCCTaGTTCTCCCGCTTTACAGAC +
Preference number: 3 (lower is better)
Translates to: AKSLRTRSTEGGALQTCHRGRLA*FSRFTD
Trigger: GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCT...GTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCACCTCGCCGCCTCTTaGGGGCGTGCGCCTGACTGC +
Preference number: 4 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRHLAAS*GRAPDC
Trigger: GCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTG...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGTGCCTGCCCTTCCAGTaGCCCGGCCCAGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: VLKGAHSKLVTSPPLAGVCLPFQ*PGPARA
Trigger: GGCTCGAGCTGGGCCGGGGCACTGGAAGGGCAGGCA...CACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR TCA 90 bp GCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCCCAGGCAGCCCCCTCTaGGTTTGCAGGCTGGAACCG +
Preference number: 4 (lower is better)
Translates to: ALQTCHLAASCGRAPDCVPGSPL*VCRLEP
Trigger: CGGTTCCAGCCTGCAAACTCAGAGGGGGCTGCCTGG...GACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCGGTTCTCGAAGCAGCTaGGGCAGCAGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: ALQTCHLAASCGRAPDCVGSRSS*GSRGFP
Trigger: GGGGAAGCCCCTGCTGCCCCAGCTGCTTCGAGAACC...GACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCATCCCCAAGGAATGCCTaGCCTTCCAGTGCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: LQTCHLAASCGRAPDCVSSPRNA*PSSAPA
Trigger: GGCCGGGGCACTGGAAGGGCAGGCATTCCTTGGGGA...TGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCTTTGGCTCCTCGCTGTaGGTCGCTGTCCGGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRFGSSL*VAVRAV
Trigger: AACTGCCCGGACAGCGACGCACAGCGAGGAGCCAAA...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR CCA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCGGCCCGGCGCAGTCCTaGCAACAGAAGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRGPAQS*QQKWFS
Trigger: TGAGAACCACTTCTGTTGCCAGGACTGCGCCGGGCC...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCATTCCCCTGCCCGGGCTaGAAACACTCCGTACTCCCC +
Preference number: 4 (lower is better)
Translates to: LQTCHLAASCGRAPDCVSFPCPG*KHSVLP
Trigger: GGGGAGTACGGAGTGTTTGCAGCCCGGGCAGGGGAA...TGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGTGCCTGCCCTTCCAGTaGCCCGGCCCAGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: VLERAVLKGAHSKLVTSPCLPFQ*PGPARA
Trigger: GGCTCGAGCTGGGCCGGGGCACTGGAAGGGCAGGCA...CGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCACTCCTGCCCTTTGGGTaGCTCCGCTTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQTCHLAASCGRAPDCVSLLPFG*LRFVPR
Trigger: CCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAG...TGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCTCCTGCCCTTTGGGTaGCTCCGCTTTGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VLKGAHSKLVTSPPLAGVLLPFG*LRFVPR
Trigger: CCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAG...CACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGGGCGTTGCTGTCCTCTaGTTGGAGGCTTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: VLKGAHSKLVTSPPLAGVGVAVL*LEASGG
Trigger: ACCCCCGGAAGCCTCCAAGCAGAGGACAGCAACGCC...CACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCGGAAGGTGGCCAGGATaGGCTGTTCACACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRGRWPG*AVHTRS
Trigger: ACTCCTGGTGTGAACAGCCCATCCTGGCCACCTTCC...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCGGTGGACCTGGATCCTaGGGCTTGGGGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALQTCHLAASCGRAPDCVGGPGS*GLGLSS
Trigger: AGAAGACAGCCCCAAGCCCCAGGATCCAGGTCCACC...GACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCGTCCAGTTGGGGGCTTaGTTGGTGTCCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRVQLGA*LVSRQR
Trigger: CCTTTGCCTGGACACCAACCAAGCCCCCAACTGGAC...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTTCCTGCTTCCGCCTaGCACAGAAGAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRLPASA*HRRAAA
Trigger: AGCTGCAGCTCTTCTGTGCCAGGCGGAAGCAGGAAG...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCACCCTCTTCCATTTTaGCTCCTCGCTGTGCGTCGC +
Preference number: 4 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRHPLPF*LLAVRR
Trigger: GCGACGCACAGCGAGGAGCCAAAATGGAAGAGGGTG...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR TCA 90 bp TCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGTGCTGCAGGAGGGTCTaGAGTCCAGTCCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SKLVTSPPLAGVRLTASQCCRRV*SPVQLG
Trigger: CCCCAACTGGACTGGACTTCAGACCCTCCTGCAGCA...CTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGTGTCCCAGGGCTTCCTaGTTCCGCCTGGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: VLKGAHSKLVTSPPLAGVCPRAS*FRLAQK
Trigger: CTTCTGTGCCAGGCGGAAGCAGGAAGCCCTGGGACA...CACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGTGTCCCAGGGCTTCCTaGTTCCGCCTGGCACAGAAG +
Preference number: 4 (lower is better)
Translates to: RSTEGGALQTCHLAASCGCPRAS*FRLAQK
Trigger: CTTCTGTGCCAGGCGGAAGCAGGAAGCCCTGGGACA...CCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGCAGAAGTGGTTCTCATaGCAGCGCTGTCCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: SKLVTSPPLAGVRLTASQQKWFS*QRCPSA
Trigger: GGCGGAGGGACAGCGCTGGCATGAGAACCACTTCTG...CTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGCTGGATCCTGGGGCTTaGGGCTGTCTTCTTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SKLVTSPPLAGVRLTASQLDPGA*GCLLGG
Trigger: CCCACCAAGAAGACAGCCCCAAGCCCCAGGATCCAG...CTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCCTACCTCCGGGTTGGTaGAAAAGGGTGGCCACTCCA +
Preference number: 4 (lower is better)
Translates to: ALQTCHLAASCGRAPDCVLPPGW*KRVATP
Trigger: TGGAGTGGCCACCCTTTTCCACCAACCCGGAGGTAG...GACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CCA 90 bp GCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCGTCCAGTTGGGGGCTTaGTTGGTGTCCAGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: ALQTCHLAASCGRAPDCVVQLGA*LVSRQR
Trigger: CCTTTGCCTGGACACCAACCAAGCCCCCAACTGGAC...GACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCACAGGCAAAGCAAGGCTaGTGCCAGCAGCGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LQTCHLAASCGRAPDCVSQAKQG*CQQRCS
Trigger: GGAACAGCGCTGCTGGCACCAGCCTTGCTTTGCCTG...TGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGAGGTTTATCAGGGCCTaGCCACAGGCCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RSTEGGALQTCHLAASCGRFIRA*PQAWQA
Trigger: TGCCTGCCAGGCCTGTGGCCAGGCCCTGATAAACCT...CCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCACAGGAGAAGATCAGCTaGTCACAAGCCGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LQTCHLAASCGRAPDCVSQEKIS*SQAGQR
Trigger: GCGCTGCCCGGCTTGTGACCAGCTGATCTTCTCCTG...TGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR TCA 90 bp GGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTGCGGGCGTGCGCCTaGCTGCGTCTCAGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: GVRLTASQSRIVRGRLALLRACA*LRLSLG
Trigger: TCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAA...CAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp AGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTGGCCCAGCTCGAGCCTaGATCCGAGTAGCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: RTRSTEGGALQTCHLAASGPARA*IRVAVL
Trigger: GAGAACCGCTACTCGGATGCAGGCTCGAGCTGGGCC...AGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTTGCGGGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAAGGCGGCATTGCTCCTaGCCTTTGGGTGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LAGVRLTASQSRIVRGRLRRHCS*PLGASA
Trigger: AGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCT...TAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGGTCTCCAGGCGGCATTaGTCCTGCCCTTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: GVRLTASQSRIVRGRLALVSRRH*SCPLGA
Trigger: GGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGAC...CAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCTTCCTGCTTCCGCCTaGCACAGAAGAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: HSKLVTSPPLAGVRLTASLPASA*HRRAAA
Trigger: AGCTGCAGCTCTTCTGTGCCAGGCGGAAGCAGGAAG...AGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CTTGCGGGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGGTCGGTTCTCCTGCTaGGGACTGGATCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LAGVRLTASQSRIVRGRLGRFSC*GLDPGS
Trigger: GCTGCCTGGATCCAGTCCCCAGCAGGAGAACCGACC...TAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGTTGCTGTCCTCTGCTTaGAGGCTTCCGGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RSTEGGALQTCHLAASCGLLSSA*RLPGVF
Trigger: GAAGACCCCCGGAAGCCTCCAAGCAGAGGACAGCAA...CCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR TCA 90 bp GCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCGCAAGGATAGCTGACTaGTGCCTGCATGTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ALQTCHLAASCGRAPDCVARIAD*CLHVWS
Trigger: AGACCACACATGCAGGCATCAGTCAGCTATCCTTGC...GACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR TCA 90 bp GTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGTTGCGGGCGTGCGCCTaGCTGCGTCTCAGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: VLERAVLKGAHSKLVTSPLRACA*LRLSLG
Trigger: TCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAA...CGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCGGCCAGCCAGAGTTCTaGACTGACATTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRGQPEF*TDICGK
Trigger: TTTGCCACAAATGTCAGTGCAGAACTCTGGCTGGCC...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp AGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTCGCTCATCAATGTCCTaGGGAGGGAGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: STEGGALQTCHLAASCGRRSSMS*GGSCCR
Trigger: CCTGCAGCAACTCCCTCCGCAGGACATTGATGAGCG...ACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCGCAGCGCTGTTCCCCTaGCCGGGCTGCAAACACTCC +
Preference number: 4 (lower is better)
Translates to: RLTASQSRIVRGRLALFSAALFP*PGCKHS
Trigger: GGAGTGTTTGCAGCCCGGGCAGGGGAACAGCGCTGC...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TGTGATCATTTAATTGGCTTGGGAGGAGGATGGTGGGGACGGGGCTGTCCCAGCTCCCCAAGGAATGCCTaGCCTTCCAGTGCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: CDHLIGLGGGWWGRGCPSSPRNA*PSSAPA
Trigger: GGCCGGGGCACTGGAAGGGCAGGCATTCCTTGGGGA...GCTGGGACAGCCCCGTCCCCACCATCCTCCTCCCAAGCCAATTAAATGATCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR GCA 90 bp CTTGCGGGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAAGTCTCCCCAAGGAATaGCTGCCCTTCCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LAGVRLTASQSRIVRGRLSLPKE*LPFQCP
Trigger: GGGGCACTGGAAGGGCAGGCATTCCTTGGGGAGACT...TAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp AGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTATCCCCTCTCTGAGCTaGGCCACTAGCACATGGTGC +
Preference number: 4 (lower is better)
Translates to: STEGGALQTCHLAASCGRIPSLS*ATSTWC
Trigger: GCACCATGTGCTAGTGGCGCAGCTCAGAGAGGGGAT...ACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGAGTTGGGGGCTTGGTTaGTGTCCAGGCAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RSTEGGALQTCHLAASCGSWGLG*CPGKGN
Trigger: GTTCCCTTTGCCTGGACACCAACCAAGCCCCCAACT...CCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTGGCTTGGGAGGAGGATaGTGGGGACGGGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTGLGGG*WGRGCP
Trigger: GGGACAGCCCCGTCCCCACCATCCTCCTCCCAAGCC...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR TCA 90 bp CTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCATGTGTGGTCTTCCTTaGGGGAGGCTGGGGAGGCCC +
Preference number: 4 (lower is better)
Translates to: LTASQSRIVRGRLALFSRMCGLP*GRLGRP
Trigger: GGGCCTCCCCAGCCTCCCTCAAGGAAGACCACACAT...GCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR TCA 90 bp GTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGGAGTGCAAGGATAGCTaGCTGATGCCTGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: VLKGAHSKLVTSPPLAGVECKDS*LMPACV
Trigger: CACACATGCAGGCATCAGTCAGCTATCCTTGCACTC...CACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR GCA 90 bp GTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCGGGCGCAGCAACTCTaGATGATGACGGCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: VLERAVLKGAHSKLVTSPRAQQL*MMTAAV
Trigger: TACTGCGGCCGTCATCATGCAGAGTTGCTGCGCCCG...CGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGAGTCACTGTCTGAGTTaGCTGGTGGACCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: RSTEGGALQTCHLAASCGSHCLS*LVDLDP
Trigger: AGGATCCAGGTCCACCAGCCAACTCAGACAGTGACT...CCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGAGTCACTGTCTGAGTTaGCTGGTGGACCTGGATCCT +
Preference number: 4 (lower is better)
Translates to: SKLVTSPPLAGVRLTASQSHCLS*LVDLDP
Trigger: AGGATCCAGGTCCACCAGCCAACTCAGACAGTGACT...CTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGTGTGTCCTTCAAGCTTaGGAAGTACCAGGCGGGCTA +
Preference number: 4 (lower is better)
Translates to: SKLVTSPPLAGVRLTASQCVLQA*EVPGGL
Trigger: TAGCCCGCCTGGTACTTCCCAAGCTTGAAGGACACA...CTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGTGTGTCCTTCAAGCTTaGGAAGTACCAGGCGGGCTA +
Preference number: 4 (lower is better)
Translates to: VLKGAHSKLVTSPPLAGVCVLQA*EVPGGL
Trigger: TAGCCCGCCTGGTACTTCCCAAGCTTGAAGGACACA...CACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGCACTCCGTACTCCCCTaGCTTCAGCAGCTCCCTACA +
Preference number: 4 (lower is better)
Translates to: GVRLTASQSRIVRGRLALHSVLP*LQQLPT
Trigger: TGTAGGGAGCTGCTGAAGCCAGGGGAGTACGGAGTG...CAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGTCCTGGCAACAGAAGTaGTTCTCATGCCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: RSTEGGALQTCHLAASCGSWQQK*FSCQRC
Trigger: ACAGCGCTGGCATGAGAACCACTTCTGTTGCCAGGA...CCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTTGCGGGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTATGGGAGGGTCCTCCTTaGAGATCCTCACTGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LAGVRLTASQSRIVRGRLWEGPP*RSSLSA
Trigger: TGCACTCAGTGAGGATCTGCAAGGAGGACCCTCCCA...TAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR GCA 90 bp GCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACACTGGCACAGAAGAGCTaGAGCTCGGCCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASQSRIVRGRLALFSRFTLAQKS*SSARSS
Trigger: GGAGGAGCGGGCCGAGCTGCAGCTCTTCTGTGCCAG...TGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTGGCACAGAAGAGCTaGAGCTCGGCCCGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: AKSLRTRSTEGGALQTCHLAQKS*SSARSS
Trigger: GGAGGAGCGGGCCGAGCTGCAGCTCTTCTGTGCCAG...GTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACGCAGCGCTGTTCCCCTaGCCGGGCTGCAAACACTCC +
Preference number: 4 (lower is better)
Translates to: AKSLRTRSTEGGALQTCHAALFP*PGCKHS
Trigger: GGAGTGTTTGCAGCCCGGGCAGGGGAACAGCGCTGC...GTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCCGGGCGCAGCAACTCTaGATGATGACGGCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: LTASQSRIVRGRLALFSRRAQQL*MMTAAV
Trigger: TACTGCGGCCGTCATCATGCAGAGTTGCTGCGCCCG...GCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTAGGCGGCATTGCTCCTaGCCTTTGGGTGCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTRRHCS*PLGASA
Trigger: AGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCT...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp AGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTGTTTCCTGTGGAAGGTaGCCAGGATGGGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RTRSTEGGALQTCHLAASVSCGR*PGWAVH
Trigger: GTGAACAGCCCATCCTGGCCACCTTCCACAGGAAAC...AGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTCTCCTGCTGGGGACTaGATCCAGGCAGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: QSRIVRGRLALFSRFTDPSPAGD*IQAAPS
Trigger: AGAGGGGGCTGCCTGGATCCAGTCCCCAGCAGGAGA...GGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTCTCCTGCTGGGGACTaGATCCAGGCAGCCCCCTCT +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTSPAGD*IQAAPS
Trigger: AGAGGGGGCTGCCTGGATCCAGTCCCCAGCAGGAGA...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTGGTCGGTTCTCCTGCTaGGGACTGGATCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTGRFSC*GLDPGS
Trigger: GCTGCCTGGATCCAGTCCCCAGCAGGAGAACCGACC...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR TCA 90 bp TCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTCCAGGCAGCCCCCTCTaGGTTTGCAGGCTGGAACCG +
Preference number: 4 (lower is better)
Translates to: SRIVRGRLALFSRFTDPFPGSPL*VCRLEP
Trigger: CGGTTCCAGCCTGCAAACTCAGAGGGGGCTGCCTGG...AAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTATTTGTGGCAAAGCCTaGTTCCTTCCTCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: HSKLVTSPPLAGVRLTASICGKA*FLPLLS
Trigger: GGACAGAAGAGGAAGGAAGCAGGCTTTGCCACAAAT...AGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTGCAAAGCAAGGCTGGTaGCAGCAGCGCTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTAKQGW*QQRCSP
Trigger: AGGGGAACAGCGCTGCTGGCACCAGCCTTGCTTTGC...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTGTCTCCAGGCGGCATTaGTCCTGCCCTTTGGGTGCC +
Preference number: 4 (lower is better)
Translates to: SAKSLRTRSTEGGALQTCVSRRH*SCPLGA
Trigger: GGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGAC...ACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGGCGTTGCTGTCCTCTaGTTGGAGGCTTCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ASQSRIVRGRLALFSRFTGVAVL*LEASGG
Trigger: ACCCCCGGAAGCCTCCAAGCAGAGGACAGCAACGCC...TGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCATCCCCTCTCTGAGCTaGGCCACTAGCACATGGTGC +
Preference number: 4 (lower is better)
Translates to: LTASQSRIVRGRLALFSRIPSLS*ATSTWC
Trigger: GCACCATGTGCTAGTGGCGCAGCTCAGAGAGGGGAT...GCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTGGGCTGTCTTCTTGGTaGGGCCAGCCAGAGTTCTGC +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTGLSSW*GQPEFC
Trigger: GCAGAACTCTGGCTGGCCCCACCAAGAAGACAGCCC...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCTTGGGGCTGTCTTCTTaGTGGGGCCAGCCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RLTASQSRIVRGRLALFSLGLSS*WGQPEF
Trigger: GAACTCTGGCTGGCCCCACCAAGAAGACAGCCCCAA...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGGAAGTCCAGTCCAGTTaGGGGCTTGGTTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VLERAVLKGAHSKLVTSPEVQSS*GLGWCP
Trigger: TGGACACCAACCAAGCCCCCAACTGGACTGGACTTC...CGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCCAGGAGAAGATCAGCTaGTCACAAGCCGGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: QSRIVRGRLALFSRFTDPQEKIS*SQAGQR
Trigger: GCGCTGCCCGGCTTGTGACCAGCTGATCTTCTCCTG...GGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCGGCCCGGCGCAGTCCTaGCAACAGAAGTGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: QSRIVRGRLALFSRFTDPGPAQS*QQKWFS
Trigger: TGAGAACCACTTCTGTTGCCAGGACTGCGCCGGGCC...GGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGGGGGTCTTCCAGGACTaGGGAAGGCGCTCGCCTAAG +
Preference number: 4 (lower is better)
Translates to: LPRKSPPKVLERAVLKGAGVFQD*GRRSPK
Trigger: CTTAGGCGAGCGCCTTCCCCAGTCCTGGAAGACCCC...CGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp AGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTGGCCAGCCAGAGTTCTaGACTGACATTTGTGGCAAA +
Preference number: 4 (lower is better)
Translates to: RTRSTEGGALQTCHLAASGQPEF*TDICGK
Trigger: TTTGCCACAAATGTCAGTGCAGAACTCTGGCTGGCC...AGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACTTCCCCTGCCCGGGCTaGAAACACTCCGTACTCCCC +
Preference number: 4 (lower is better)
Translates to: SQSRIVRGRLALFSRFTDFPCPG*KHSVLP
Trigger: GGGGAGTACGGAGTGTTTGCAGCCCGGGCAGGGGAA...GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGCAAAGCAAGGCTGGTaGCAGCAGCGCTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: SPPKVLERAVLKGAHSKLAKQGW*QQRCSP
Trigger: AGGGGAACAGCGCTGCTGGCACCAGCCTTGCTTTGC...AAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTGTCCCTCCGCCTCGGTaGAGCGCCAGGAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: SRIVRGRLALFSRFTDPFVPPPR*SARRRS
Trigger: TGATCTTCTCCTGGCGCTGCACCGAGGCGGAGGGAC...AAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACACAGAAGTGGTTCTCATaGCAGCGCTGTCCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: ASQSRIVRGRLALFSRFTQKWFS*QRCPSA
Trigger: GGCGGAGGGACAGCGCTGGCATGAGAACCACTTCTG...TGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTGGCCCAGCTCGAGCCTaGATCCGAGTAGCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: SRIVRGRLALFSRFTDPFGPARA*IRVAVL
Trigger: GAGAACCGCTACTCGGATGCAGGCTCGAGCTGGGCC...AAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCGTTTCCTGTGGAAGGTaGCCAGGATGGGCTGTTCAC +
Preference number: 4 (lower is better)
Translates to: RLTASQSRIVRGRLALFSVSCGR*PGWAVH
Trigger: GTGAACAGCCCATCCTGGCCACCTTCCACAGGAAAC...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCGAAGTCCAGTCCAGTTaGGGGCTTGGTTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: LTASQSRIVRGRLALFSREVQSS*GLGWCP
Trigger: TGGACACCAACCAAGCCCCCAACTGGACTGGACTTC...GCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCAGGCAAAGCAAGGCTaGTGCCAGCAGCGCTGTTCC +
Preference number: 4 (lower is better)
Translates to: SAKSLRTRSTEGGALQTCQAKQG*CQQRCS
Trigger: GGAACAGCGCTGCTGGCACCAGCCTTGCTTTGCCTG...ACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGTTCTCGAAGCAGCTaGGGCAGCAGGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GFAKKVSAKSLRTRSTEGGSRSS*GSRGFP
Trigger: GGGGAAGCCCCTGCTGCCCCAGCTGCTTCGAGAACC...CCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACATCTGAGTTTGCAGGCTaGAACCGCCGGCAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: ASQSRIVRGRLALFSRFTSEFAG*NRRQQR
Trigger: TCGCTGCTGCCGGCGGTTCCAGCCTGCAAACTCAGA...TGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR TCA 90 bp TCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACTGCTGCAGGAGGGTCTaGAGTCCAGTCCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SQSRIVRGRLALFSRFTDCCRRV*SPVQLG
Trigger: CCCCAACTGGACTGGACTTCAGACCCTCCTGCAGCA...GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR TCA 90 bp TCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTAGAACTGCAGGACCCTaGGCATGGGTATCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: SAKSLRTRSTEGGALQTCRTAGP*AWVSSG
Trigger: CCCTGAGGATACCCATGCTCAGGGTCCTGCAGTTCT...ACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR GCA 90 bp AGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTTTTCCCCCTCATCATTaGCACCTCTTCTCCAATCTA +
Preference number: 4 (lower is better)
Translates to: STEGGALQTCHLAASCGRFPPHH*HLFSNL
Trigger: TAGATTGGAGAAGAGGTGGCAATGATGAGGGGGAAA...ACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR GCA 90 bp GGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGTCCCTCCGCCTCGGTaGAGCGCCAGGAGAAGATCA +
Preference number: 4 (lower is better)
Translates to: GFAKKVSAKSLRTRSTEGVPPPR*SARRRS
Trigger: TGATCTTCTCCTGGCGCTGCACCGAGGCGGAGGGAC...CCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACAGTCTCCCCAAGGAATaGCTGCCCTTCCAGTGCCCC +
Preference number: 4 (lower is better)
Translates to: SQSRIVRGRLALFSRFTDSLPKE*LPFQCP
Trigger: GGGGCACTGGAAGGGCAGGCATTCCTTGGGGAGACT...GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTGTTCGGGAGAGGGTTaGAGAGTTCACCGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: LTASQSRIVRGRLALFSRCSGEG*RVHRGL
Trigger: CAAACCTCGGTGAACTCTGCAACCCTCTCCCGAACA...GCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGGGAAGGTGGCCAGGATaGGCTGTTCACACCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LPRKSPPKVLERAVLKGAGRWPG*AVHTRS
Trigger: ACTCCTGGTGTGAACAGCCCATCCTGGCCACCTTCC...CGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTGGTGGACCTGGATCCTaGGGCTTGGGGCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRIVRGRLALFSRFTDPFGGPGS*GLGLSS
Trigger: AGAAGACAGCCCCAAGCCCCAGGATCCAGGTCCACC...AAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp CAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCAGTTGGGGGCTTGGTTaGTGTCCAGGCAAAGGGAAC +
Preference number: 4 (lower is better)
Translates to: QSRIVRGRLALFSRFTDPSWGLG*CPGKGN
Trigger: GTTCCCTTTGCCTGGACACCAACCAAGCCCCCAACT...GGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTAGGTTTATCAGGGCCTaGCCACAGGCCTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SRIVRGRLALFSRFTDPFRFIRA*PQAWQA
Trigger: TGCCTGCCAGGCCTGTGGCCAGGCCCTGATAAACCT...AAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACTCTGAGTTTGCAGGCTaGAACCGCCGGCAGCAGCGA +
Preference number: 4 (lower is better)
Translates to: SQSRIVRGRLALFSRFTDSEFAG*NRRQQR
Trigger: TCGCTGCTGCCGGCGGTTCCAGCCTGCAAACTCAGA...GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TGGGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGTTGGGAGGAGGATGGTaGGGACGGGGCTGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: WVLPRKSPPKVLERAVLKLGGGW*GRGCPS
Trigger: GCTGGGACAGCCCCGTCCCCACCATCCTCCTCCCAA...CTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR TCA 90 bp CTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCCATGGTAGAAGTAGATaGGGTTTATCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: LTASQSRIVRGRLALFSRHGRSR*GLSGPG
Trigger: GCCAGGCCCTGATAAACCTCATCTACTTCTACCATG...GCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTCGCTCATCAATGTCCTaGGGAGGGAGTTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRIVRGRLALFSRFTDPFRSSMS*GGSCCR
Trigger: CCTGCAGCAACTCCCTCCGCAGGACATTGATGAGCG...AAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp GCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAACCCAAGCTCAGAACTaGAGGACCCTGAGCATGGGT +
Preference number: 4 (lower is better)
Translates to: ASQSRIVRGRLALFSRFTTQAQN*RTLSMG
Trigger: ACCCATGCTCAGGGTCCTGCAGTTCTGAGCTTGGGT...TGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR CCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTCCTGGCAACAGAAGTaGTTCTCATGCCAGCGCTGT +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTSWQQK*FSCQRC
Trigger: ACAGCGCTGGCATGAGAACCACTTCTGTTGCCAGGA...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTTTGCTGTCCTCTGCTTaGAGGCTTCCGGGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SRIVRGRLALFSRFTDPFLLSSA*RLPGVF
Trigger: GAAGACCCCCGGAAGCCTCCAAGCAGAGGACAGCAA...AAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR TCA 90 bp TCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACAGAACTGCAGGACCCTaGGGAGACATGGAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: SQSRIVRGRLALFSRFTDRTAGP*GDMEEG
Trigger: CCCTTCTTCCATGTCTCCTCAGGGTCCTGCAGTTCT...GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR TCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTCATGGTAGAAGTAGATaGGGTTTATCAGGGCCTGGC +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTHGRSR*GLSGPG
Trigger: GCCAGGCCCTGATAAACCTCATCTACTTCTACCATG...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCAGCTTCCCTTCTTATaGTTTCCCTTCTTAACCCCC +
Preference number: 4 (lower is better)
Translates to: RLTASQSRIVRGRLALFSQLPFL*FPFLTP
Trigger: GGGGGTTAAGAAGGGAAAGCATAAGAAGGGAAGCTG...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR GCA 90 bp GCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACATGTTCGGGAGAGGGTTaGAGAGTTCACCGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: ASQSRIVRGRLALFSRFTCSGEG*RVHRGL
Trigger: CAAACCTCGGTGAACTCTGCAACCCTCTCCCGAACA...TGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGAGTTCACCGAGGTTTaGTCCCTTCCTTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: ASQSRIVRGRLALFSRFTEFTEV*SLPSVR
Trigger: CCGAACTGAAGGAAGGGACCAAACCTCGGTGAACTC...TGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR TCA 90 bp GGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGCACGACTCTACTACCTaGGCATGGGTATCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GFAKKVSAKSLRTRSTEGHDSTT*AWVSSG
Trigger: CCCTGAGGATACCCATGCTCAGGTAGTAGAGTCGTG...CCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR GCA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTTGGGGAATGGGTTTTaGCAAGAAAGTCTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTLGNGF*QESLRQ
Trigger: TTGGCGGAGACTTTCTTGGCAAAACCCATTCCCCAA...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACGTTGGTGGAAAAGGGTaGCCACTCCACAGGATAGAG +
Preference number: 4 (lower is better)
Translates to: SQSRIVRGRLALFSRFTDVGGKG*PLHRIE
Trigger: CTCTATCCTGTGGAGTGGCCACCCTTTTCCACCAAC...GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CCA 90 bp TGGGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGCACTCCGTACTCCCCTaGCTTCAGCAGCTCCCTACA +
Preference number: 4 (lower is better)
Translates to: WVLPRKSPPKVLERAVLKHSVLP*LQQLPT
Trigger: TGTAGGGAGCTGCTGAAGCCAGGGGAGTACGGAGTG...CTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGATTTGTGGCAAAGCCTaGTTCCTTCCTCTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LPRKSPPKVLERAVLKGAICGKA*FLPLLS
Trigger: GGACAGAAGAGGAAGGAAGCAGGCTTTGCCACAAAT...CGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR GCA 90 bp TCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACTTGGGGAATGGGTTTTaGCAAGAAAGTCTCCGCCAA +
Preference number: 4 (lower is better)
Translates to: SQSRIVRGRLALFSRFTDLGNGF*QESLRQ
Trigger: TTGGCGGAGACTTTCTTGGCAAAACCCATTCCCCAA...GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TGGGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGAAACTACCTCCGGGTTaGTGGAAAAGGGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: WVLPRKSPPKVLERAVLKKLPPG*WKRVAT
Trigger: AGTGGCCACCCTTTTCCACCAACCCGGAGGTAGTTT...CTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CCA 90 bp TGGGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGAGTTCACCGAGGTTTaGTCCCTTCCTTCAGTTCGG +
Preference number: 4 (lower is better)
Translates to: WVLPRKSPPKVLERAVLKEFTEV*SLPSVR
Trigger: CCGAACTGAAGGAAGGGACCAAACCTCGGTGAACTC...CTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp GCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCGTAGCTTTGGGGAATaGGTTTTGCCAAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: AKSLRTRSTEGGALQTCHRSFGE*VLPRKS
Trigger: AGACTTTCTTGGCAAAACCCATTCCCCAAAGCTACG...GTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CCA 90 bp TGGGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGAAAGCCCCTAGAGTCTaGTTTGACAATACAGACCCC +
Preference number: 4 (lower is better)
Translates to: WVLPRKSPPKVLERAVLKKAPRV*FDNTDP
Trigger: GGGGTCTGTATTGTCAAACCAGACTCTAGGGGCTTT...CTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CCA 90 bp TGGGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGCGTAGCTTTGGGGAATaGGTTTTGCCAAGAAAGTCT +
Preference number: 4 (lower is better)
Translates to: WVLPRKSPPKVLERAVLKRSFGE*VLPRKS
Trigger: AGACTTTCTTGGCAAAACCCATTCCCCAAAGCTACG...CTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS CCA 90 bp GCCTGGGAGGGAGTCTGGCGCCGCAACCCCGACCGCGGCGCGGGGTaGGTTCGGGCGGCCCTTGGAACGCTCCGGCCAGGGATGCGCGGT +
Preference number: 5 (lower is better)
Translates to: AWEGVWRRNPDRGAG*VRAALGTLRPGMRG
Trigger: ACCGCGCATCCCTGGCCGGAGCGTTCCAAGGGCCGCCCGAACCCACCCCGCGCCGCGGTCGGGGTTGCGGCGCCAGACTCCCTCCCAGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394259.5
ENST00000483200.2
CDS CCA 90 bp GTACCAGGCGGGCTACCCCCTGTCCCAGGGCTTCCTGCTTCCGCCTaGCACAGAAGAGCTGCAGCTCGGCCCGCTCCTCCTCCCCAAGGG +
Preference number: 5 (lower is better)
Translates to: VPGGLPPVPGLPASA*HRRAAARPAPPPQG
Trigger: CCCTTGGGGAGGAGGAGCGGGCCGAGCTGCAGCTCTTCTGTGCCAGGCGGAAGCAGGAAGCCCTGGGACAGGGGGTAGCCCGCCTGGTAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
CDS GCA 90 bp AGCTTGGGAAGTACCAGGCGGGCTACCCCCTGTCCCAGGGCTTCCTaGTTCCGCCTGGCACAGAAGAGCTGCAGCTCGGCCCGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SLGSTRRATPCPRAS*FRLAQKSCSSARSS
Trigger: GGAGGAGCGGGCCGAGCTGCAGCTCTTCTGTGCCAGGCGGAAGCAGGAAGCCCTGGGACAGGGGGTAGCCCGCCTGGTACTTCCCAAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
CDS GCA 90 bp CCGCCCAGAGGCCCGGCGCAGTCCTGGCAACAGAAGTGGTTCTCATaGCAGCGCTGTCCCTCCGCCTCGGTGCAGCGCCAGGAGAAGATC +
Preference number: 5 (lower is better)
Translates to: PPRGPAQSWQQKWFS*QRCPSASVQRQEKI
Trigger: GATCTTCTCCTGGCGCTGCACCGAGGCGGAGGGACAGCGCTGGCATGAGAACCACTTCTGTTGCCAGGACTGCGCCGGGCCTCTGGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000483200.2
CDS-3UTR CAA 90 bp TCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGCAGCCCCCTCTGAGTTaGCAGGCTGGAACCGCCGGC +
Preference number: 5 (lower is better)
Translates to: SKLVTSPPLAGVRLTASQQPPLS*QAGTAG
Trigger: GCCGGCGGTTCCAGCCTGCAAACTCAGAGGGGGCTG...CTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS GCA 90 bp GGCAACAGAAGTGGTTCTCATGCCAGCGCTGTCCCTCCGCCTCGGTaGAGCGCCAGGAGAAGATCAGCTGGTCACAAGCCGGGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: GNRSGSHASAVPPPR*SARRRSAGHKPGSA
Trigger: CGCGCTGCCCGGCTTGTGACCAGCTGATCTTCTCCTGGCGCTGCACCGAGGCGGAGGGACAGCGCTGGCATGAGAACCACTTCTGTTGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000483200.2
CDS-3UTR CAA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCATTGCTCCTGCCCTTaGGGTGCCTCCGCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRHCSCP*GASALS
Trigger: GGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATG...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCTTGGGAGGGTCCTCCTaGCAGATCCTCACTGAGTGC +
Preference number: 5 (lower is better)
Translates to: LKGAHSKLVTSPPLAGVRLGGSS*QILTEC
Trigger: GCACTCAGTGAGGATCTGCAAGGAGGACCCTCCCAA...GCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CAA 90 bp CGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGGGGCGCACTCCAAACTaGTCACCTCGCCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: RSTEGGALQTCHLAASCGGRTPN*SPRRLL
Trigger: CAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCC...CCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS GCA 90 bp AGTTCGGTCGAGTCCAGTCTCCCCAAGGAATGCCTGCCCTTCCAGTaGCCCGGCCCAGCTCGAGCCTGCATCCGAGTAGCGGTTCTCGAA +
Preference number: 5 (lower is better)
Translates to: SSVESSLPKECLPFQ*PGPARACIRVAVLE
Trigger: TTCGAGAACCGCTACTCGGATGCAGGCTCGAGCTGGGCCGGGGCACTGGAAGGGCAGGCATTCCTTGGGGAGACTGGACTCGACCGAACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS-3UTR CAA 90 bp GCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCGTGTGTCCTTCAAGCTaGGGAAGTACCAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: ALQTCHLAASCGRAPDCVVCPSS*GSTRRA
Trigger: AGCCCGCCTGGTACTTCCCAAGCTTGAAGGACACAC...GACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCATTGCTCCTGCCCTTaGGGTGCCTCCGCTTTGTCC +
Preference number: 5 (lower is better)
Translates to: HSKLVTSPPLAGVRLTASHCSCP*GASALS
Trigger: GGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATG...AGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGTTGCTGTCCTCTGCTaGGAGGCTTCCGGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: LQTCHLAASCGRAPDCVSVAVLC*EASGGL
Trigger: AAGACCCCCGGAAGCCTCCAAGCAGAGGACAGCAAC...TGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS GCA 90 bp GGGATCACGAATAGTCTCCAGGCGGCATTGCTCCTGCCCTTTGGGTaGCTCCGCTTTGTCCCCAGGTCGGTTCTCCTGCTGGGGACTGGA +
Preference number: 5 (lower is better)
Translates to: GITNSLQAALLLPFG*LRFVPRSVLLLGTG
Trigger: TCCAGTCCCCAGCAGGAGAACCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATTCGTGATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS GCA 90 bp GGGGTGTCCTTGGGATCACGAATAGTCTCCAGGCGGCATTGCTCCTaGCCTTTGGGTGCCTCCGCTTTGTCCCCAGGTCGGTTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: GVSLGSRIVSRRHCS*PLGASALSPGRFSC
Trigger: GCAGGAGAACCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATTCGTGATCCCAAGGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS GCA 90 bp CCACTAGCACATGGTGCAGTGCGTCTTAGAGGCGTTGCTGTCCTCTaGTTGGAGGCTTCCGGGGGTCTTCCAGGACTGGGGAAGGCGCTC +
Preference number: 5 (lower is better)
Translates to: PLAHGAVRLRGVAVL*LEASGGLPGLGKAL
Trigger: GAGCGCCTTCCCCAGTCCTGGAAGACCCCCGGAAGCCTCCAAGCAGAGGACAGCAACGCCTCTAAGACGCACTGCACCATGTGCTAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp TCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGGAGTCACTGTCTGAGTaGGCTGGTGGACCTGGATCC +
Preference number: 5 (lower is better)
Translates to: SKLVTSPPLAGVRLTASQESLSE*AGGPGS
Trigger: GGATCCAGGTCCACCAGCCAACTCAGACAGTGACTC...CTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGAGTCACTGTCTGAGTaGGCTGGTGGACCTGGATCC +
Preference number: 5 (lower is better)
Translates to: LQTCHLAASCGRAPDCVSESLSE*AGGPGS
Trigger: GGATCCAGGTCCACCAGCCAACTCAGACAGTGACTC...TGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp GGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGGTCCTGCGGAGGGAGTaGCTGCAGGAGGGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: GVRLTASQSRIVRGRLALVLRRE*LQEGLK
Trigger: CTTCAGACCCTCCTGCAGCAACTCCCTCCGCAGGAC...CAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp AGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTAAGCATGCCCTCCATTaGGGAGGGTCCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: STEGGALQTCHLAASCGRKHALH*GGSSLQ
Trigger: CTGCAAGGAGGACCCTCCCAAATGGAGGGCATGCTT...ACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CAA 90 bp AGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTCAGTTGGGGGCTTGGTaGGTGTCCAGGCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: STEGGALQTCHLAASCGRQLGAW*VSRQRE
Trigger: TTCCCTTTGCCTGGACACCAACCAAGCCCCCAACTG...ACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCCAGCCCCCTCTGAGTTaGCAGGCTGGAACCGCCGGC +
Preference number: 5 (lower is better)
Translates to: QSRIVRGRLALFSRFTDPQPPLS*QAGTAG
Trigger: GCCGGCGGTTCCAGCCTGCAAACTCAGAGGGGGCTG...GGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS GCA 90 bp GAGAAAGGGGTGTCCTTGGGATCACGAATAGTCTCCAGGCGGCATTaGTCCTGCCCTTTGGGTGCCTCCGCTTTGTCCCCAGGTCGGTTC +
Preference number: 5 (lower is better)
Translates to: EKGVSLGSRIVSRRH*SCPLGASALSPGRF
Trigger: GAACCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATTCGTGATCCCAAGGACACCCCTTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS CCA 90 bp CCTGCGGAGGGAGTTGCTGCAGGAGGGTCTGAAGTCCAGTCCAGTTaGGGGCTTGGTTGGTGTCCAGGCAAAGGGAACCCAAGCTCAGAA +
Preference number: 5 (lower is better)
Translates to: PAEGVAAGGSEVQSS*GLGWCPGKGNPSSE
Trigger: TTCTGAGCTTGGGTTCCCTTTGCCTGGACACCAACCAAGCCCCCAACTGGACTGGACTTCAGACCCTCCTGCAGCAACTCCCTCCGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
CDS CCA 90 bp GCTTCAGCAGCTCCCTACACTTCTCACAGGTGTGTCCTTCAAGCTTaGGAAGTACCAGGCGGGCTACCCCCTGTCCCAGGGCTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: ASAAPYTSHRCVLQA*EVPGGLPPVPGLPA
Trigger: AGCAGGAAGCCCTGGGACAGGGGGTAGCCCGCCTGGTACTTCCCAAGCTTGAAGGACACACCTGTGAGAAGTGTAGGGAGCTGCTGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
CDS-3UTR CAA 90 bp TCCAAACTTGTCACCTCGCCGCCTCTTGCGGGCGTGCGCCTGACTGCGTCTCAGAGAGTTCACCGAGGTTaGGTCCCTTCCTTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: SKLVTSPPLAGVRLTASQRVHRG*VPSFSS
Trigger: CGAACTGAAGGAAGGGACCAAACCTCGGTGAACTCT...CTGAGACGCAGTCAGGCGCACGCCCGCAAGAGGCGGCGAGGTGACAAGTTTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCAGTCTCCAGGCGGCATaGCTCCTGCCCTTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: RLTASQSRIVRGRLALFSSLQAA*LLPFGC
Trigger: GCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACT...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CTTGCGGGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTATGCGTCTTAGAGGCGTaGCTGTCCTCTGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LAGVRLTASQSRIVRGRLCVLEA*LSSAWR
Trigger: CCTCCAAGCAGAGGACAGCAACGCCTCTAAGACGCA...TAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCCCGCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS TCA 90 bp ATAGAGGACATGTTGGTCTCAGAGGAAGGGCACGACTCTACTACCTaGGCATGGGTATCCTCAGGGTCCTCCCCCGGCAGGTGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: IEDMLVSEEGHDSTT*AWVSSGSSPGRWPE
Trigger: CTCAGGCCACCTGCCGGGGGAGGACCCTGAGGATACCCATGCTCAGGTAGTAGAGTCGTGCCCTTCCTCTGAGACCAACATGTCCTCTAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CCA 90 bp GTTGCTGCAGGAGGGTCTGAAGTCCAGTCCAGTTGGGGGCTTGGTTaGTGTCCAGGCAAAGGGAACCCAAGCTCAGAACTGCAGGACCCT +
Preference number: 5 (lower is better)
Translates to: VAAGGSEVQSSWGLG*CPGKGNPSSELQDP
Trigger: AGGGTCCTGCAGTTCTGAGCTTGGGTTCCCTTTGCCTGGACACCAACCAAGCCCCCAACTGGACTGGACTTCAGACCCTCCTGCAGCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
CDS-3UTR CAA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTAGTCTCCAGGCGGCATaGCTCCTGCCCTTTGGGTGC +
Preference number: 5 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTSLQAA*LLPFGC
Trigger: GCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACT...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp TTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGGTCCTGCGGAGGGAGTaGCTGCAGGAGGGTCTGAAG +
Preference number: 5 (lower is better)
Translates to: LPRKSPPKVLERAVLKGAVLRRE*LQEGLK
Trigger: CTTCAGACCCTCCTGCAGCAACTCCCTCCGCAGGAC...CGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp GCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACTTGGGTGCCTCCGCTTaGTCCCCAGGTCGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: AKSLRTRSTEGGALQTCHLGASA*SPGRFS
Trigger: GGAGAACCGACCTGGGGACAAAGCGGAGGCACCCAA...GTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp GGCGTGCGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGGAGAAAGGGGTGTCCTaGGGATCACGAATAGTCTCC +
Preference number: 5 (lower is better)
Translates to: GVRLTASQSRIVRGRLALEKGVS*GSRIVS
Trigger: GGAGACTATTCGTGATCCCAAGGACACCCCTTTCTC...CAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCGCACGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp AGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCACCTCGCCGCCTCTGAGAAAGGGGTGTCCTaGGGATCACGAATAGTCTCC +
Preference number: 5 (lower is better)
Translates to: RTRSTEGGALQTCHLAASEKGVS*GSRIVS
Trigger: GGAGACTATTCGTGATCCCAAGGACACCCCTTTCTC...AGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCAGGGGGAGGCTAGCCTaGTTCTCCCGCTTTACAGAC +
Preference number: 5 (lower is better)
Translates to: RLTASQSRIVRGRLALFSRGRLA*FSRFTD
Trigger: GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCT...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCGCACCCTCTTCCATTTaGGCTCCTCGCTGTGCGTCG +
Preference number: 5 (lower is better)
Translates to: PPKVLERAVLKGAHSKLVAPSSI*APRCAS
Trigger: CGACGCACAGCGAGGAGCCAAAATGGAAGAGGGTGC...GACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR CAA 90 bp CCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTCCAAACTACCTCCGGGTaGGTGGAAAAGGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: PPKVLERAVLKGAHSKLVQTTSG*VEKGGH
Trigger: GTGGCCACCCTTTTCCACCAACCCGGAGGTAGTTTG...GACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CAA 90 bp TTTAATTGGCTTGGGAGGAGGATGGTGGGGACGGGGCTGTCCCAGCCTGTGGAGACGGCCGCAGTAGAGTaGTCCATCATGGTAGAAGTA +
Preference number: 5 (lower is better)
Translates to: FNWLGRRMVGTGLSQPVETAAVE*SIMVEV
Trigger: TACTTCTACCATGATGGACAACTCTACTGCGGCCGT...CTCCACAGGCTGGGACAGCCCCGTCCCCACCATCCTCCTCCCAAGCCAATTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000458694.6
CDS-3UTR CAA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCGTGTTCGGGAGAGGGTaGCAGAGTTCACCGAGGTTT +
Preference number: 5 (lower is better)
Translates to: RLTASQSRIVRGRLALFSVFGRG*QSSPRF
Trigger: AAACCTCGGTGAACTCTGCAACCCTCTCCCGAACAC...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp TCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTTGCTGTCCTCTGCTaGGAGGCTTCCGGGGGTCTT +
Preference number: 5 (lower is better)
Translates to: SPPKVLERAVLKGAHSKLVAVLC*EASGGL
Trigger: AAGACCCCCGGAAGCCTCCAAGCAGAGGACAGCAAC...AAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCAGGGGGAGGCTAGCCTaGTTCTCCCGCTTTACAGAC +
Preference number: 5 (lower is better)
Translates to: QSRIVRGRLALFSRFTDPRGRLA*FSRFTD
Trigger: GTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCT...GGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCAGGATAGAGGACATGTaGGTCTCAGAGGAAGGGCAC +
Preference number: 5 (lower is better)
Translates to: RLTASQSRIVRGRLALFSRIEDM*VSEEGH
Trigger: GTGCCCTTCCTCTGAGACCAACATGTCCTCTATCCT...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CAA 90 bp TCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTCAGTTGGGGGCTTGGTaGGTGTCCAGGCAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: SPPKVLERAVLKGAHSKLQLGAW*VSRQRE
Trigger: TTCCCTTTGCCTGGACACCAACCAAGCCCCCAACTG...AAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp TCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTGTGTGTCCTTCAAGCTaGGGAAGTACCAGGCGGGCT +
Preference number: 5 (lower is better)
Translates to: SAKSLRTRSTEGGALQTCVCPSS*GSTRRA
Trigger: AGCCCGCCTGGTACTTCCCAAGCTTGAAGGACACAC...ACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp GTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTGTGTTCGGGAGAGGGTaGCAGAGTTCACCGAGGTTT +
Preference number: 5 (lower is better)
Translates to: VSAKSLRTRSTEGGALQTVFGRG*QSSPRF
Trigger: AAACCTCGGTGAACTCTGCAACCCTCTCCCGAACAC...AGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp GGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGTTGGGTGCCTCCGCTTaGTCCCCAGGTCGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: GFAKKVSAKSLRTRSTEGLGASA*SPGRFS
Trigger: GGAGAACCGACCTGGGGACAAAGCGGAGGCACCCAA...CCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp GCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACATGCGTCTTAGAGGCGTaGCTGTCCTCTGCTTGGAGG +
Preference number: 5 (lower is better)
Translates to: ASQSRIVRGRLALFSRFTCVLEA*LSSAWR
Trigger: CCTCCAAGCAGAGGACAGCAACGCCTCTAAGACGCA...TGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp GGTTTTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGGCGCACTCCAAACTaGTCACCTCGCCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GFAKKVSAKSLRTRSTEGGRTPN*SPRRLL
Trigger: CAAGAGGCGGCGAGGTGACAAGTTTGGAGTGCGCCC...CCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAAAACC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CGCCTGACTGCGTCTCAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCTTTGGGGAATGGGTTTaGCCAAGAAAGTCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: RLTASQSRIVRGRLALFSFGEWV*PRKSPP
Trigger: TGGCGGAGACTTTCTTGGCAAAACCCATTCCCCAAA...GGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTGAGACGCAGTCAGGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS CCA 90 bp AGATTAGGCACGAAGTCAAACTACCTCCGGGTTGGTGGAAAAGGGTaGCCACTCCACAGGATAGAGGACATGTTGGTCTCAGAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: RLGTKSNYLRVGGKG*PLHRIEDMLVSEEG
Trigger: CCCTTCCTCTGAGACCAACATGTCCTCTATCCTGTGGAGTGGCCACCCTTTTCCACCAACCCGGAGGTAGTTTGACTTCGTGCCTAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CAA 90 bp TTGCCAAGAAAGTCTCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGAGAGTTCACCGAGGTTaGGTCCCTTCCTTCAGTTCG +
Preference number: 5 (lower is better)
Translates to: LPRKSPPKVLERAVLKGARVHRG*VPSFSS
Trigger: CGAACTGAAGGAAGGGACCAAACCTCGGTGAACTCT...CGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGAGACTTTCTTGGCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp CAGTCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTGGGGAATGGGTTTaGCCAAGAAAGTCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: QSRIVRGRLALFSRFTDPFGEWV*PRKSPP
Trigger: TGGCGGAGACTTTCTTGGCAAAACCCATTCCCCAAA...GGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS CCA 90 bp AGGCAACAAGAGATTAGGCACGAAGTCAAACTACCTCCGGGTTGGTaGAAAAGGGTGGCCACTCCACAGGATAGAGGACATGTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: RQQEIRHEVKLPPGW*KRVATPQDRGHVGL
Trigger: GAGACCAACATGTCCTCTATCCTGTGGAGTGGCCACCCTTTTCCACCAACCCGGAGGTAGTTTGACTTCGTGCCTAATCTCTTGTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CCA 90 bp CACCTCTTCTCCAATCTAGAGCAGCTTCTAAGCATGCCCTCCATTTaGGAGGGTCCTCCTTGCAGATCCTCACTGAGTGCAAGGATAGCT +
Preference number: 5 (lower is better)
Translates to: HLFSNLEQLLSMPSI*EGPPCRSSLSARIA
Trigger: AGCTATCCTTGCACTCAGTGAGGATCTGCAAGGAGGACCCTCCCAAATGGAGGGCATGCTTAGAAGCTGCTCTAGATTGGAGAAGAGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS-3UTR CAA 90 bp TCCGCCAAAAGTCTTAGAACGCGCAGTACTGAAGGGGGCGCACTCCAAACTTGTACGGCCGCAGTAGAGTaGTCCATCATGGTAGAAGTA +
Preference number: 5 (lower is better)
Translates to: SAKSLRTRSTEGGALQTCTAAVE*SIMVEV
Trigger: TACTTCTACCATGATGGACAACTCTACTGCGGCCGT...ACAAGTTTGGAGTGCGCCCCCTTCAGTACTGCGCGTTCTAAGACTTTTGGCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359201.6
ENST00000458694.6
CDS-3UTR CAA 90 bp TCTAGGATTGTTAGGGGGAGGCTAGCCTTGTTCTCCCGCTTTACAGACCCCTTTCTTTCCCCCTCATCATaGCCACCTCTTCTCCAATCT +
Preference number: 5 (lower is better)
Translates to: SRIVRGRLALFSRFTDPFLSPSS*PPLLQS
Trigger: AGATTGGAGAAGAGGTGGCAATGATGAGGGGGAAAG...AAAGGGGTCTGTAAAGCGGGAGAACAAGGCTAGCCTCCCCCTAACAATCCTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CCA 90 bp AAAAGGCAACAAGAGATTAGGCACGAAGTCAAACTACCTCCGGGTTaGTGGAAAAGGGTGGCCACTCCACAGGATAGAGGACATGTTGGT +
Preference number: 5 (lower is better)
Translates to: KRQQEIRHEVKLPPG*WKRVATPQDRGHVG
Trigger: ACCAACATGTCCTCTATCCTGTGGAGTGGCCACCCTTTTCCACCAACCCGGAGGTAGTTTGACTTCGTGCCTAATCTCTTGTTGCCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CAA 90 bp GGCGCCGCAACCCCGACCGCGGCGCGGGGTGGGTTCGGGCGGCCCTaGGAACGCTCCGGCCAGGGATGCGCGGTGAGAGCTGCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: GAATPTAARGGFGRP*ERSGQGCAVRAAGP
Trigger: GGGGCCCGCAGCTCTCACCGCGCATCCCTGGCCGGAGCGTTCCAAGGGCCGCCCGAACCCACCCCGCGCCGCGGTCGGGGTTGCGGCGCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394259.5
ENST00000483200.2
CDS CCA 72 bp CAGAGGGCGTCCGCCTCCCGCGCCTGGGAGGGAGTCTaGCGCCGCAACCCCGACCGCGGCGCGGGGTGGGTT +
Preference number: 6 (lower is better)
Translates to: QRASASRAWEGV*RRNPDRGAGWV
Trigger: AACCCACCCCGCGCCGCGGTCGGGGTTGCGGCGCCAGACTCCCTCCCAGGCGCGGGAGGCGGACGCCCTCTG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394259.5
ENST00000483200.2
CDS CCA 72 bp GTGCGGTGGGGGCGCTCCTGGAGGGACGGGACGGCGTaGGACCGGGGCGAGGGTCCCAGCCCGGGAGAACCC +
Preference number: 6 (lower is better)
Translates to: VRWGRSWRDGTA*DRGEGPSPGEP
Trigger: GGGTTCTCCCGGGCTGGGACCCTCGCCCCGGTCCCACGCCGTCCCGTCCCTCCAGGAGCGCCCCCACCGCAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000483200.2
CDS CAA 72 bp ACCCCGACCGCGGCGCGGGGTGGGTTCGGGCGGCCCTaGGAACGCTCCGGCCAGGGATGCGCGGTGAGAGCT +
Preference number: 6 (lower is better)
Translates to: TPTAARGGFGRP*ERSGQGCAVRA
Trigger: AGCTCTCACCGCGCATCCCTGGCCGGAGCGTTCCAAGGGCCGCCCGAACCCACCCCGCGCCGCGGTCGGGGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394259.5
ENST00000483200.2
CDS GCA 72 bp GGGTTCGGGCGGCCCTTGGAACGCTCCGGCCAGGGATaGGCGGTGAGAGCTGCGGGCCCCGAGGCTTGGGTC +
Preference number: 6 (lower is better)
Translates to: GFGRPLERSGQG*AVRAAGPEAWV
Trigger: GACCCAAGCCTCGGGGCCCGCAGCTCTCACCGCGCATCCCTGGCCGGAGCGTTCCAAGGGCCGCCCGAACCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394259.5
ENST00000483200.2
CDS GCA 72 bp CCCAGGGCTTCCTGCTTCCGCCTGGCACAGAAGAGCTaGAGCTCGGCCCGCTCCTCCTCCCCAAGGGCCAGG +
Preference number: 6 (lower is better)
Translates to: PRASCFRLAQKS*SSARSSSPRAR
Trigger: CCTGGCCCTTGGGGAGGAGGAGCGGGCCGAGCTGCAGCTCTTCTGTGCCAGGCGGAAGCAGGAAGCCCTGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
CDS GCA 72 bp CGGTGGGGGCGCTCCAAGGAATGCCTGCCCTTCCAGTaGCCCGGCCCAGCTCGAGCCTGCATCCGAGTAGCG +
Preference number: 6 (lower is better)
Translates to: RWGRSKECLPFQ*PGPARACIRVA
Trigger: CGCTACTCGGATGCAGGCTCGAGCTGGGCCGGGGCACTGGAAGGGCAGGCATTCCTTGGAGCGCCCCCACCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000394259.5
CDS GCA 72 bp GGCCCGGCGCAGTCCTGGCAACAGAAGTGGTTCTCATaGCAGCGCTGTCCCTCCGCCTCGGTGCAGCGCCAG +
Preference number: 6 (lower is better)
Translates to: GPAQSWQQKWFS*QRCPSASVQRQ
Trigger: CTGGCGCTGCACCGAGGCGGAGGGACAGCGCTGGCATGAGAACCACTTCTGTTGCCAGGACTGCGCCGGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000483200.2
CDS CCA 72 bp GGGCTACCCCCTGTCCCAGGGCTTCCTGCTTCCGCCTaGCACAGAAGAGCTGCAGCTCGGCCCGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: GLPPVPGLPASA*HRRAAARPAPP
Trigger: AGGAGGAGCGGGCCGAGCTGCAGCTCTTCTGTGCCAGGCGGAAGCAGGAAGCCCTGGGACAGGGGGTAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
CDS CCA 72 bp CCGCCCAGAGGCCCGGCGCAGTCCTGGCAACAGAAGTaGTTCTCATGCCAGCGCTGTCCCTCCGCCTCGGTG +
Preference number: 6 (lower is better)
Translates to: PPRGPAQSWQQK*FSCQRCPSASV
Trigger: CACCGAGGCGGAGGGACAGCGCTGGCATGAGAACCACTTCTGTTGCCAGGACTGCGCCGGGCCTCTGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000483200.2
CDS GCA 72 bp AGTACCAGGCGGGCTACCCCCTGTCCCAGGGCTTCCTaGTTCCGCCTGGCACAGAAGAGCTGCAGCTCGGCC +
Preference number: 6 (lower is better)
Translates to: STRRATPCPRAS*FRLAQKSCSSA
Trigger: GGCCGAGCTGCAGCTCTTCTGTGCCAGGCGGAAGCAGGAAGCCCTGGGACAGGGGGTAGCCCGCCTGGTACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
CDS GCA 72 bp TGCCTGCCCTTCCAGTGCCCCGGCCCAGCTCGAGCCTaGATCCGAGTAGCGGTTCTCGAAGCAGCTGGGGCA +
Preference number: 6 (lower is better)
Translates to: CLPFQCPGPARA*IRVAVLEAAGA
Trigger: TGCCCCAGCTGCTTCGAGAACCGCTACTCGGATGCAGGCTCGAGCTGGGCCGGGGCACTGGAAGGGCAGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000483200.2
CDS GCA 72 bp GGCAAAGCAAGGCTGGTGCCAGCAGCGCTGTTCCCCTaGCCGGGCTGCAAACACTCCGTACTCCCCTGGCTT +
Preference number: 6 (lower is better)
Translates to: GKARLVPAALFP*PGCKHSVLPWL
Trigger: AAGCCAGGGGAGTACGGAGTGTTTGCAGCCCGGGCAGGGGAACAGCGCTGCTGGCACCAGCCTTGCTTTGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000483200.2
CDS GCA 72 bp AGTGGTTCTCATGCCAGCGCTGTCCCTCCGCCTCGGTaGAGCGCCAGGAGAAGATCAGCTGGTCACAAGCCG +
Preference number: 6 (lower is better)
Translates to: SGSHASAVPPPR*SARRRSAGHKP
Trigger: CGGCTTGTGACCAGCTGATCTTCTCCTGGCGCTGCACCGAGGCGGAGGGACAGCGCTGGCATGAGAACCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000483200.2
CDS GCA 72 bp ATCCTCTCCCTTACCAAGGAATGCCTGCCCTTCCAGTaGCCCGGCCCAGCTCGAGCCTGCATCCGAGTAGCG +
Preference number: 6 (lower is better)
Translates to: ILSLTKECLPFQ*PGPARACIRVA
Trigger: CGCTACTCGGATGCAGGCTCGAGCTGGGCCGGGGCACTGGAAGGGCAGGCATTCCTTGGTAAGGGAGAGGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000483200.2
CDS CAA 72 bp AGGCGGCATTGCTCCTGCCCTTTGGGTGCCTCCGCTTaGTCCCCAGGTCGGTTCTCCTGCTGGGGACTGGAT +
Preference number: 6 (lower is better)
Translates to: RRHCSCPLGASA*SPGRFSCWGLD
Trigger: ATCCAGTCCCCAGCAGGAGAACCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS CAA 90 bp CTAGCACATGGTGCAGTGCGTCTTAGAGGCGTTGCTGTCCTCTGCTaGGAGGCTTCCGGGGGTCTTCCAGGACTGGGGAAGGCGCTCGCC +
Preference number: 6 (lower is better)
Translates to: LAHGAVRLRGVAVLC*EASGGLPGLGKALA
Trigger: GGCGAGCGCCTTCCCCAGTCCTGGAAGACCCCCGGAAGCCTCCAAGCAGAGGACAGCAACGCCTCTAAGACGCACTGCACCATGTGCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS GCA 72 bp CTGGTCACAAGCCGGGCAGCGCGGGCGCAGCAACTCTaGATGATGACGGCCGCAGTAGAGTTGTCCATCATG +
Preference number: 6 (lower is better)
Translates to: LVTSRAARAQQL*MMTAAVELSIM
Trigger: CATGATGGACAACTCTACTGCGGCCGTCATCATGCAGAGTTGCTGCGCCCGCGCTGCCCGGCTTGTGACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000483200.2
CDS GCA 72 bp CATGGTGCAGTGCGTCTTAGAGGCGTTGCTGTCCTCTaGTTGGAGGCTTCCGGGGGTCTTCCAGGACTGGGG +
Preference number: 6 (lower is better)
Translates to: HGAVRLRGVAVL*LEASGGLPGLG
Trigger: CCCCAGTCCTGGAAGACCCCCGGAAGCCTCCAAGCAGAGGACAGCAACGCCTCTAAGACGCACTGCACCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS CAA 72 bp GGTGCAGTGCGTCTTAGAGGCGTTGCTGTCCTCTGCTaGGAGGCTTCCGGGGGTCTTCCAGGACTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: GAVRLRGVAVLC*EASGGLPGLGK
Trigger: CTTCCCCAGTCCTGGAAGACCCCCGGAAGCCTCCAAGCAGAGGACAGCAACGCCTCTAAGACGCACTGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS CAA 90 bp CCCAAGGGCCAGGCAGTAGCGCTCATCAATGTCCTGCGGAGGGAGTaGCTGCAGGAGGGTCTGAAGTCCAGTCCAGTTGGGGGCTTGGTT +
Preference number: 6 (lower is better)
Translates to: PKGQAVALINVLRRE*LQEGLKSSPVGGLV
Trigger: AACCAAGCCCCCAACTGGACTGGACTTCAGACCCTCCTGCAGCAACTCCCTCCGCAGGACATTGATGAGCGCTACTGCCTGGCCCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
CDS CAA 90 bp GGCTTCAGCAGCTCCCTACACTTCTCACAGGTGTGTCCTTCAAGCTaGGGAAGTACCAGGCGGGCTACCCCCTGTCCCAGGGCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: GFSSSLHFSQVCPSS*GSTRRATPCPRASC
Trigger: GCAGGAAGCCCTGGGACAGGGGGTAGCCCGCCTGGTACTTCCCAAGCTTGAAGGACACACCTGTGAGAAGTGTAGGGAGCTGCTGAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
CDS CAA 90 bp TCCTTGGGATCACGAATAGTCTCCAGGCGGCATTGCTCCTGCCCTTaGGGTGCCTCCGCTTTGTCCCCAGGTCGGTTCTCCTGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: SLGSRIVSRRHCSCP*GASALSPGRFSCWG
Trigger: TCCCCAGCAGGAGAACCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATTCGTGATCCCAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS GCA 72 bp ACCGCCGGCAGCAGCGAGGAGTGTTCGGGAGAGGGTTaGAGAGTTCACCGAGGTTTGGTCCCTTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: TAGSSEECSGEG*RVHRGLVPSFS
Trigger: ACTGAAGGAAGGGACCAAACCTCGGTGAACTCTGCAACCCTCTCCCGAACACTCCTCGCTGCTGCCGGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS GCA 72 bp AATAGTCTCCAGGCGGCATTGCTCCTGCCCTTTGGGTaGCTCCGCTTTGTCCCCAGGTCGGTTCTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: NSLQAALLLPFG*LRFVPRSVLLL
Trigger: CAGCAGGAGAACCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS GCA 72 bp TTGGGATCACGAATAGTCTCCAGGCGGCATTGCTCCTaGCCTTTGGGTGCCTCCGCTTTGTCCCCAGGTCGG +
Preference number: 6 (lower is better)
Translates to: LGSRIVSRRHCS*PLGASALSPGR
Trigger: CCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATTCGTGATCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS CCA 72 bp TTCCCCTGCCCGGGCTGCAAACACTCCGTACTCCCCTaGCTTCAGCAGCTCCCTACACTTCTCACAGGTGTG +
Preference number: 6 (lower is better)
Translates to: FPCPGCKHSVLP*LQQLPTLLTGV
Trigger: CACACCTGTGAGAAGTGTAGGGAGCTGCTGAAGCCAGGGGAGTACGGAGTGTTTGCAGCCCGGGCAGGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
ENST00000483200.2
CDS CAA 72 bp AACCGCCGGCAGCAGCGAGGAGTGTTCGGGAGAGGGTaGCAGAGTTCACCGAGGTTTGGTCCCTTCCTTCAG +
Preference number: 6 (lower is better)
Translates to: NRRQQRGVFGRG*QSSPRFGPFLQ
Trigger: CTGAAGGAAGGGACCAAACCTCGGTGAACTCTGCAACCCTCTCCCGAACACTCCTCGCTGCTGCCGGCGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS CAA 72 bp TCACGAATAGTCTCCAGGCGGCATTGCTCCTGCCCTTaGGGTGCCTCCGCTTTGTCCCCAGGTCGGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SRIVSRRHCSCP*GASALSPGRFS
Trigger: GGAGAACCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATTCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS CAA 72 bp GGTGTCCTTGGGATCACGAATAGTCTCCAGGCGGCATaGCTCCTGCCCTTTGGGTGCCTCCGCTTTGTCCCC +
Preference number: 6 (lower is better)
Translates to: GVLGITNSLQAA*LLPFGCLRFVP
Trigger: GGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATTCGTGATCCCAAGGACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS CAA 90 bp GGAGAAAGGGGTGTCCTTGGGATCACGAATAGTCTCCAGGCGGCATaGCTCCTGCCCTTTGGGTGCCTCCGCTTTGTCCCCAGGTCGGTT +
Preference number: 6 (lower is better)
Translates to: GERGVLGITNSLQAA*LLPFGCLRFVPRSV
Trigger: AACCGACCTGGGGACAAAGCGGAGGCACCCAAAGGGCAGGAGCAATGCCGCCTGGAGACTATTCGTGATCCCAAGGACACCCCTTTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359201.6
ENST00000394260.2
ENST00000458694.6
CDS TCA 72 bp ATGTTGGTCTCAGAGGAAGGGCACGACTCTACTACCTaGGCATGGGTATCCTCAGGGTCCTCCCCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: MLVSEEGHDSTT*AWVSSGSSPGR
Trigger: CCTGCCGGGGGAGGACCCTGAGGATACCCATGCTCAGGTAGTAGAGTCGTGCCCTTCCTCTGAGACCAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CAA 72 bp CTGCAGGAGGGTCTGAAGTCCAGTCCAGTTGGGGGCTaGGTTGGTGTCCAGGCAAAGGGAACCCAAGCTCAG +
Preference number: 6 (lower is better)
Translates to: LQEGLKSSPVGG*VGVQAKGTQAQ
Trigger: CTGAGCTTGGGTTCCCTTTGCCTGGACACCAACCAAGCCCCCAACTGGACTGGACTTCAGACCCTCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
CDS CAA 72 bp CAGGCAGTAGCGCTCATCAATGTCCTGCGGAGGGAGTaGCTGCAGGAGGGTCTGAAGTCCAGTCCAGTTGGG +
Preference number: 6 (lower is better)
Translates to: QAVALINVLRRE*LQEGLKSSPVG
Trigger: CCCAACTGGACTGGACTTCAGACCCTCCTGCAGCAACTCCCTCCGCAGGACATTGATGAGCGCTACTGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
CDS CAA 72 bp AGCTCCCTACACTTCTCACAGGTGTGTCCTTCAAGCTaGGGAAGTACCAGGCGGGCTACCCCCTGTCCCAGG +
Preference number: 6 (lower is better)
Translates to: SSLHFSQVCPSS*GSTRRATPCPR
Trigger: CCTGGGACAGGGGGTAGCCCGCCTGGTACTTCCCAAGCTTGAAGGACACACCTGTGAGAAGTGTAGGGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
ENST00000463606.1
ENST00000483200.2
CDS CAA 90 bp AGGGAGTTGCTGCAGGAGGGTCTGAAGTCCAGTCCAGTTGGGGGCTaGGTTGGTGTCCAGGCAAAGGGAACCCAAGCTCAGAACTGCAGG +
Preference number: 6 (lower is better)
Translates to: RELLQEGLKSSPVGG*VGVQAKGTQAQNCR
Trigger: CCTGCAGTTCTGAGCTTGGGTTCCCTTTGCCTGGACACCAACCAAGCCCCCAACTGGACTGGACTTCAGACCCTCCTGCAGCAACTCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000359201.6
ENST00000394259.5
ENST00000394260.2
ENST00000458694.6
CDS CAA 72 bp CTCCAATCTAGAGCAGCTTCTAAGCATGCCCTCCATTaGGGAGGGTCCTCCTTGCAGATCCTCACTGAGTGC +
Preference number: 6 (lower is better)
Translates to: LQSRAASKHALH*GGSSLQILTEC
Trigger: GCACTCAGTGAGGATCTGCAAGGAGGACCCTCCCAAATGGAGGGCATGCTTAGAAGCTGCTCTAGATTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CAA 90 bp CCACCTCTTCTCCAATCTAGAGCAGCTTCTAAGCATGCCCTCCATTaGGGAGGGTCCTCCTTGCAGATCCTCACTGAGTGCAAGGATAGC +
Preference number: 6 (lower is better)
Translates to: PPLLQSRAASKHALH*GGSSLQILTECKDS
Trigger: GCTATCCTTGCACTCAGTGAGGATCTGCAAGGAGGACCCTCCCAAATGGAGGGCATGCTTAGAAGCTGCTCTAGATTGGAGAAGAGGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS TCA 72 bp TCCTCCTTGCAGATCCTCACTGAGTGCAAGGATAGCTaGCTGATGCCTGCATGTGTGGTCTTCCTTGAGGGA +
Preference number: 6 (lower is better)
Translates to: SSLQILTECKDS*LMPACVVFLEG
Trigger: TCCCTCAAGGAAGACCACACATGCAGGCATCAGTCAGCTATCCTTGCACTCAGTGAGGATCTGCAAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CCA 72 bp ACGAAGTCAAACTACCTCCGGGTTGGTGGAAAAGGGTaGCCACTCCACAGGATAGAGGACATGTTGGTCTCA +
Preference number: 6 (lower is better)
Translates to: TKSNYLRVGGKG*PLHRIEDMLVS
Trigger: TGAGACCAACATGTCCTCTATCCTGTGGAGTGGCCACCCTTTTCCACCAACCCGGAGGTAGTTTGACTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CCA 72 bp GAGATTAGGCACGAAGTCAAACTACCTCCGGGTTGGTaGAAAAGGGTGGCCACTCCACAGGATAGAGGACAT +
Preference number: 6 (lower is better)
Translates to: EIRHEVKLPPGW*KRVATPQDRGH
Trigger: ATGTCCTCTATCCTGTGGAGTGGCCACCCTTTTCCACCAACCCGGAGGTAGTTTGACTTCGTGCCTAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CCA 72 bp CAAGAGATTAGGCACGAAGTCAAACTACCTCCGGGTTaGTGGAAAAGGGTGGCCACTCCACAGGATAGAGGA +
Preference number: 6 (lower is better)
Translates to: QEIRHEVKLPPG*WKRVATPQDRG
Trigger: TCCTCTATCCTGTGGAGTGGCCACCCTTTTCCACCAACCCGGAGGTAGTTTGACTTCGTGCCTAATCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS CCA 72 bp TCCAATCTAGAGCAGCTTCTAAGCATGCCCTCCATTTaGGAGGGTCCTCCTTGCAGATCCTCACTGAGTGCA +
Preference number: 6 (lower is better)
Translates to: SNLEQLLSMPSI*EGPPCRSSLSA
Trigger: TGCACTCAGTGAGGATCTGCAAGGAGGACCCTCCCAAATGGAGGGCATGCTTAGAAGCTGCTCTAGATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359201.6
CDS TCA 72 bp CTCTACAATTACTGGGAGAGCTCCAGCAGAAAACATTaGGCATTGGTTGGAGGAAAAAGGGCTTGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LYNYWESSSRKH*ALVGGKRAWLL
Trigger: CAGCAGCCAAGCCCTTTTTCCTCCAACCAATGCTCAATGTTTTCTGCTGGAGCTCTCCCAGTAATTGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463606.1