Pregenerated sensors for PRH2 (Homo sapiens)
Ensembl gene IDs: ENSG00000134551Ensembl transcript IDs: ENST00000396400.4
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTACAGATGAGCAGAAAGAAAGCCAGAGCTGCAAACTCTTGTGGTaGAGAGAATACATCACTAGGGGGAACCCATCCCTGGGAAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: FTDEQKESQSCKLLW*REYITRGNPSLGKK Trigger: CTTCTTTCCCAGGGATGGGTTCCCCCTAGTGATGTATTCTCTTCACCACAAGAGTTTGCAGCTCTGGCTTTCTTTCTGCTCATCTGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR TCA 90 bp | CAGATGCTTGCTATCACAATGGCATTAAAAATTCGAAGACTAGGCCTTTTGGTTATGAGGAATCTTCCATaGAGGTGCTTTTGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: QMLAITMALKIRRLGLLVMRNLP*RCFWEE Trigger: CTCCTCCCAAAAGCACCTTCATGGAAGATTCCTCAT...AACCAAAAGGCCTAGTCTTCGAATTTTTAATGCCATTGTGATAGCAAGCATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR TCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATATGCAAACTCTTGTGGTaGAGAGAATACATCACTAGG | + |
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Preference number: 2 (lower is better) Translates to: SSLFAAMLNALYSILIIICKLLW*REYITR Trigger: CCTAGTGATGTATTCTCTTCACCACAAGAGTTTGCA...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR GCA 90 bp | GAATCTTCCATGAAGGTGCTTTTGGGAGGAGTGAATTCTCTATTAAATTTCATCCCCTTCAAATTATGCTaGCGCCTTGATGAAATCCAT | + |
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Preference number: 2 (lower is better) Translates to: ESSMKVLLGGVNSLLNFIPFKLC*RLDEIH Trigger: ATGGATTTCATCAAGGCGGCAGCATAATTTGAAGGG...GATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR GCA 90 bp | GAATCTTCCATGAAGGTGCTTTTGGGAGGAGTGAATTCTCTATTAAATTTCATCTTGCCCTTCAAATTATaGTGCCGCCTTGATGAAATC | + |
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Preference number: 2 (lower is better) Translates to: ESSMKVLLGGVNSLLNFILPFKL*CRLDEI Trigger: GATTTCATCAAGGCGGCAGCATAATTTGAAGGGCAA...GATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR GCA 90 bp | CAGATGCTTGCTATCACAATGGCATTAAAAATTCGAAGACTAGGCCTTTTGGTTATTTTCACACGCAATTaGCCTTCAAATTATGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: QMLAITMALKIRRLGLLVIFTRN*PSNYAA Trigger: GGCAGCATAATTTGAAGGGCAATTGCGTGTGAAAAT...AACCAAAAGGCCTAGTCTTCGAATTTTTAATGCCATTGTGATAGCAAGCATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATAAGCATACTAAAGGACTaGCTGTTAATGAGGAATCTT | + |
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Preference number: 2 (lower is better) Translates to: SSLFAAMLNALYSILIIISILKD*LLMRNL Trigger: AAGATTCCTCATTAACAGGCAGTCCTTTAGTATGCT...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATATATCAAAGACAACGTTaGCATCTTTTGAGATGGTCA | + |
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Preference number: 2 (lower is better) Translates to: SSLFAAMLNALYSILIIIYQRQR*HLLRWS Trigger: TGACCATCTCAAAAGATGCCAACGTTGTCTTTGATA...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATATGGAATTTTGGGGAATaGATTCATAACACTGGTGAA | + |
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Preference number: 2 (lower is better) Translates to: SSLFAAMLNALYSILIIIWNFGE*IHNTGE Trigger: TTCACCAGTGTTATGAATCCATTCCCCAAAATTCCA...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR GCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATAACACTCAGAAGGAGATaGTATAATCAGAAATTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SSLFAAMLNALYSILIIITLRRR*YNQKLQ Trigger: TTGCAATTTCTGATTATAGCATCTCCTTCTGAGTGT...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATATCTCTTGTTATTTTCTaGACAGAAAAACAGATCTGC | + |
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Preference number: 2 (lower is better) Translates to: SSLFAAMLNALYSILIIISLVIF*TEKQIC Trigger: GCAGATCTGTTTTTCTGTCCAGAAAATAACAAGAGA...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR CAA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATATCCATGAAGGTGCTTTaGGGAGGAGTGAATTCTCTA | + |
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Preference number: 3 (lower is better) Translates to: SSLFAAMLNALYSILIIISMKVL*GGVNSL Trigger: TAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGA...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR CAA 90 bp | CAGATGCTTGCTATCACAATGGCATTAAAAATTCGAAGACTAGGCCTTTTGGTTTTATCAAAGACAACGTaGGCATCTTTTGAGATGGTC | + |
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Preference number: 3 (lower is better) Translates to: QMLAITMALKIRRLGLLVLSKTT*ASFEMV Trigger: GACCATCTCAAAAGATGCCAACGTTGTCTTTGATAA...AACCAAAAGGCCTAGTCTTCGAATTTTTAATGCCATTGTGATAGCAAGCATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR-3UTR CAA 90 bp | ATACACATAAGGTTAGCAGCTACTTTGAGGTACACCATTTTAATCATGGTCAGAAATTTTCACACGCAATaGCCCTTCAAATTATGCTGC | + |
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Preference number: 3 (lower is better) Translates to: IHIRLAATLRYTILIMVRNFHTQ*PFKLCC Trigger: GCAGCATAATTTGAAGGGCAATTGCGTGTGAAAATT...TCTGACCATGATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCTTATGTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR TCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATAATGAGGAATCTTCCATaGAGGTGCTTTTGGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: SSLFAAMLNALYSILIIIMRNLP*RCFWEE Trigger: CTCCTCCCAAAAGCACCTTCATGGAAGATTCCTCAT...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR TCA 90 bp | GAATCTTCCATGAAGGTGCTTTTGGGAGGAGTGAATTCTCTATTAAATTTCATCGAACGTCTTCTTGGCTaGCATCTTCATCTAAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: ESSMKVLLGGVNSLLNFIERLLG*HLHLSP Trigger: AGGACTTAGATGAAGATGTCAGCCAAGAAGACGTTC...GATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR TCA 90 bp | CAGATGCTTGCTATCACAATGGCATTAAAAATTCGAAGACTAGGCCTTTTGGTTTGCAAACTCTTGTGGTaGAGAGAATACATCACTAGG | + |
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Preference number: 4 (lower is better) Translates to: QMLAITMALKIRRLGLLVCKLLW*REYITR Trigger: CCTAGTGATGTATTCTCTTCACCACAAGAGTTTGCA...AACCAAAAGGCCTAGTCTTCGAATTTTTAATGCCATTGTGATAGCAAGCATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR TCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATAGACTGGGTCAAGATGTaGAAGAGATCTTCGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: SSLFAAMLNALYSILIIIDWVKM*KRSSNP Trigger: AGGATTCGAAGATCTCTTTCACATCTTGACCCAGTC...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR TCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATAACTGGTGAACGGAATTaGCTGGGTCAAGATGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: SSLFAAMLNALYSILIIITGERN*LGQDVK Trigger: TTTCACATCTTGACCCAGTCAATTCCGTTCACCAGT...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR GCA 90 bp | CAGATGCTTGCTATCACAATGGCATTAAAAATTCGAAGACTAGGCCTTTTGGTTCCCTTCAAATTATGCTaGCGCCTTGATGAAATCCAT | + |
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Preference number: 4 (lower is better) Translates to: QMLAITMALKIRRLGLLVPFKLC*RLDEIH Trigger: ATGGATTTCATCAAGGCGGCAGCATAATTTGAAGGG...AACCAAAAGGCCTAGTCTTCGAATTTTTAATGCCATTGTGATAGCAAGCATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR GCA 90 bp | ATACACATAAGGTTAGCAGCTACTTTGAGGTACACCATTTTAATCATGGTCAGATTGGAGCTCTCTCTTTaGAGCCATGCTAAATGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IHIRLAATLRYTILIMVRLELSL*SHAKCL Trigger: AAGGCATTTAGCATGGCTGCAAAGAGAGAGCTCCAA...TCTGACCATGATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCTTATGTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATAGTTGCATTTAGACATTaGAGCTCTCTCTTTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SSLFAAMLNALYSILIIIVAFRH*SSLFAA Trigger: GGCTGCAAAGAGAGAGCTCCAATGTCTAAATGCAAC...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR TCA 90 bp | ATACACATAAGGTTAGCAGCTACTTTGAGGTACACCATTTTAATCATGGTCAGAGGTACATGTGATAGATaGAGAAATTGTCAGCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: IHIRLAATLRYTILIMVRGTCDR*RNCQRC Trigger: GCAACGCTGACAATTTCTTCATCTATCACATGTACC...TCTGACCATGATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCTTATGTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR GCA 90 bp | ATACACATAAGGTTAGCAGCTACTTTGAGGTACACCATTTTAATCATGGTCAGATTGCCCTTCAAATTATaGTGCCGCCTTGATGAAATC | + |
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Preference number: 4 (lower is better) Translates to: IHIRLAATLRYTILIMVRLPFKL*CRLDEI Trigger: GATTTCATCAAGGCGGCAGCATAATTTGAAGGGCAA...TCTGACCATGATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCTTATGTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CCA 90 bp | AGCTCTCTCTTTGCAGCCATGCTAAATGCCTTGTATAGTATCCTCATTATAATAAAGGGAACGTCTTCTTaGCTGACATCTTCATCTAAG | + |
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Preference number: 4 (lower is better) Translates to: SSLFAAMLNALYSILIIIKGTSS*LTSSSK Trigger: CTTAGATGAAGATGTCAGCCAAGAAGACGTTCCCTT...TATTATAATGAGGATACTATACAAGGCATTTAGCATGGCTGCAAAGAGAGAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR CAA 72 bp | TTGTGTAAATCAAGTCACATCAATTTTCACACGCAATaGCCCTTCAAATTATGCTGCCGCCTTGATGAAATC | + |
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Preference number: 4 (lower is better) Translates to: LCKSSHINFHTQ*PFKLCCRLDEI Trigger: GATTTCATCAAGGCGGCAGCATAATTTGAAGGGCAATTGCGTGTGAAAATTGATGTGACTTGATTTACACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR GCA 90 bp | ATACACATAAGGTTAGCAGCTACTTTGAGGTACACCATTTTAATCATGGTCAGAATTTTCACACGCAATTaGCCTTCAAATTATGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: IHIRLAATLRYTILIMVRIFTRN*PSNYAA Trigger: GGCAGCATAATTTGAAGGGCAATTGCGTGTGAAAAT...TCTGACCATGATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCTTATGTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTTGCTATCACAATGGCATTAAAAATTCGAAGACTAGGCCTTTTGGTTATGCAGATAGCTGTCTaGGGCAAAATAATCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: QMLAITMALKIRRLGLLVMQIAV*GKIIFL Trigger: CAAAAAGATTATTTTGCCCCAGACAGCTATCTGCAT...AACCAAAAGGCCTAGTCTTCGAATTTTTAATGCCATTGTGATAGCAAGCATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CCA 90 bp | CAGATGCTTGCTATCACAATGGCATTAAAAATTCGAAGACTAGGCCTTTTGGTTAGAACATACAGTATCTaGATCAGAATGCAGATAGCT | + |
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Preference number: 4 (lower is better) Translates to: QMLAITMALKIRRLGLLVRTYSI*IRMQIA Trigger: AGCTATCTGCATTCTGATCCAGATACTGTATGTTCT...AACCAAAAGGCCTAGTCTTCGAATTTTTAATGCCATTGTGATAGCAAGCATCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| 3UTR CAA 72 bp | CTGCCTGTTAATGAGGAATCTTCCATGAAGGTGCTTTaGGGAGGAGTGAATTCTCTATTAAATTTCATCATA | + |
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Preference number: 4 (lower is better) Translates to: LPVNEESSMKVL*GGVNSLLNFII Trigger: TATGATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTCCTCATTAACAGGCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CCA 90 bp | ATACACATAAGGTTAGCAGCTACTTTGAGGTACACCATTTTAATCATGGTCAGATGGAATTTTGGGGAATaGATTCATAACACTGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: IHIRLAATLRYTILIMVRWNFGE*IHNTGE Trigger: TTCACCAGTGTTATGAATCCATTCCCCAAAATTCCA...TCTGACCATGATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCTTATGTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR GCA 90 bp | ATACACATAAGGTTAGCAGCTACTTTGAGGTACACCATTTTAATCATGGTCAGAACACTCAGAAGGAGATaGTATAATCAGAAATTGCAA | + |
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Preference number: 4 (lower is better) Translates to: IHIRLAATLRYTILIMVRTLRRR*YNQKLQ Trigger: TTGCAATTTCTGATTATAGCATCTCCTTCTGAGTGT...TCTGACCATGATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCTTATGTGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CAA 90 bp | ATACACATAAGGTTAGCAGCTACTTTGAGGTACACCATTTTAATCATGGTCAGATCCATGAAGGTGCTTTaGGGAGGAGTGAATTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: IHIRLAATLRYTILIMVRSMKVL*GGVNSL Trigger: TAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGA...TCTGACCATGATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCTTATGTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTCCATGAAGGTGCTTTTGGGAGGAGTGAATTCTCTATTAAATTTCATCCGAATCCTCACAGCTTaGACTATCTCCAGAATTTGT | + |
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Preference number: 5 (lower is better) Translates to: ESSMKVLLGGVNSLLNFIRILTA*TISRIC Trigger: ACAAATTCTGGAGATAGTCAAAGCTGTGAGGATTCG...GATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTCCATGAAGGTGCTTTTGGGAGGAGTGAATTCTCTATTAAATTTCATCAATTTTCACACGCAATaGCCCTTCAAATTATGCTGC | + |
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Preference number: 5 (lower is better) Translates to: ESSMKVLLGGVNSLLNFINFHTQ*PFKLCC Trigger: GCAGCATAATTTGAAGGGCAATTGCGTGTGAAAATT...GATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTCCATGAAGGTGCTTTTGGGAGGAGTGAATTCTCTATTAAATTTCATCAGGTTAGCAGCTACTTaGAGGTACACCATTTTAATC | + |
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Preference number: 5 (lower is better) Translates to: ESSMKVLLGGVNSLLNFIRLAAT*RYTILI Trigger: GATTAAAATGGTGTACCTCAAAGTAGCTGCTAACCT...GATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTCCATGAAGGTGCTTTTGGGAGGAGTGAATTCTCTATTAAATTTCATCAAGAAATTGTCAGCGTaGCATTTAGACATTGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: ESSMKVLLGGVNSLLNFIKKLSA*HLDIGA Trigger: AGCTCCAATGTCTAAATGCAACGCTGACAATTTCTT...GATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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| CDS-3UTR CAA 90 bp | GAATCTTCCATGAAGGTGCTTTTGGGAGGAGTGAATTCTCTATTAAATTTCATCGCCATGCTAAATGCCTaGTATAGTATCCTCATTATA | + |
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Preference number: 5 (lower is better) Translates to: ESSMKVLLGGVNSLLNFIAMLNA*YSILII Trigger: TATAATGAGGATACTATACAAGGCATTTAGCATGGC...GATGAAATTTAATAGAGAATTCACTCCTCCCAAAAGCACCTTCATGGAAGATTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396400.4 |
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