Pregenerated sensors for PRH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000231887Ensembl transcript IDs: ENST00000534923.1, ENST00000536086.2, ENST00000538332.2, ENST00000539853.5, ENST00000541175.1, ENST00000541456.1, ENST00000541977.5, ENST00000546317.1, ENST00000632814.1, ENST00000633091.1, ENST00000633939.1, ENST00000634061.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTTATAATCTTTACAGCGAATAGTCTCCAGGCTGATGGTCTTCCTCTAGGAAGTAATCTCCTCAAAGACTaGGATTCCCTGTCATTGAAT | + |
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Preference number: 2 (lower is better) Translates to: VIIFTANSLQADGLPLGSNLLKD*DSLSLN Trigger: ATTCAATGACAGGGAATCTCAGTCTTTGAGGAGATT...ACTTCCTAGAGGAAGACCATCAGCCTGGAGACTATTCGCTGTAAAGATTATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538332.2 ENST00000633939.1 |
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| 3UTR-3UTR TCA 90 bp | ATAATCTTTACAGCGAATAGTCTCCAGGCTGATGGTCTTCCTCTAGGAAGTTTGAATCTCCTCAAAGACTaGGATTCCCTGTCATTGAAT | + |
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Preference number: 2 (lower is better) Translates to: IIFTANSLQADGLPLGSLNLLKD*DSLSLN Trigger: ATTCAATGACAGGGAATCTCAGTCTTTGAGGAGATT...CAAACTTCCTAGAGGAAGACCATCAGCCTGGAGACTATTCGCTGTAAAGATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000538332.2 ENST00000633939.1 |
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| CDS-3UTR CCA 90 bp | GTTATAATCTTTACAGCGAATAGTCTCCAGGCTGATGGTCTTCCTCTAGGAAGTTTCCTTTGGGTTTTCTaGGAGAATGGGTGTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: VIIFTANSLQADGLPLGSFLWVF*ENGCPC Trigger: GCAAGGACACCCATTCTCCCAGAAAACCCAAAGGAA...ACTTCCTAGAGGAAGACCATCAGCCTGGAGACTATTCGCTGTAAAGATTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538332.2 ENST00000633939.1 |
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| CDS-3UTR CCA 90 bp | ATAATCTTTACAGCGAATAGTCTCCAGGCTGATGGTCTTCCTCTAGGAAGTTTGTTCCTTTGGGTTTTCTaGGAGAATGGGTGTCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: IIFTANSLQADGLPLGSLFLWVF*ENGCPC Trigger: GCAAGGACACCCATTCTCCCAGAAAACCCAAAGGAA...CAAACTTCCTAGAGGAAGACCATCAGCCTGGAGACTATTCGCTGTAAAGATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538332.2 ENST00000633939.1 |
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| CDS CCA 90 bp | CTGTGCTGGGATCCCTGGAATAAATACCATGTAGCTTCATCTGCCTaGTGTGGCTCCATAAGGAGAGGATTAAGAGAAGAATGGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LCWDPWNKYHVASSA*CGSIRRGLREEWKP Trigger: TGGCTTCCATTCTTCTCTTAATCCTCTCCTTATGGAGCCACACCAGGCAGATGAAGCTACATGGTATTTATTCCAGGGATCCCAGCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546317.1 |
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| CDS-3UTR CAA 90 bp | ATAATCTTTACAGCGAATAGTCTCCAGGCTGATGGTCTTCCTCTAGGAAGTTTGGTTTGTAGGAAGAAGTaGCAGGGTGGGGAAGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IIFTANSLQADGLPLGSLVCRKK*QGGEAD Trigger: GTCAGCTTCCCCACCCTGCAACTTCTTCCTACAAAC...CAAACTTCCTAGAGGAAGACCATCAGCCTGGAGACTATTCGCTGTAAAGATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538332.2 ENST00000633939.1 |
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| CDS-3UTR CAA 90 bp | ATAATCTTTACAGCGAATAGTCTCCAGGCTGATGGTCTTCCTCTAGGAAGTTTGGGAGAATGGGTGTCCTaGCTTCAGAAAAGTCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: IIFTANSLQADGLPLGSLGEWVS*LQKSQV Trigger: TACCTGACTTTTCTGAAGCAAGGACACCCATTCTCC...CAAACTTCCTAGAGGAAGACCATCAGCCTGGAGACTATTCGCTGTAAAGATTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000538332.2 ENST00000633939.1 |
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| CDS TCA 90 bp | CATCGTACTATTTCTTCAAGCTTCAGTCCCCTCACAGGGATAAGATaGGAAACTGATGTTACATGTGCAAGTAGTGGTGTCTATCAAAAG | + |
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Preference number: 5 (lower is better) Translates to: HRTISSSFSPLTGIR*ETDVTCASSGVYQK Trigger: CTTTTGATAGACACCACTACTTGCACATGTAACATCAGTTTCTCATCTTATCCCTGTGAGGGGACTGAAGCTTGAAGAAATAGTACGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000536086.2 ENST00000632814.1 |
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| CDS TCA 90 bp | TTACACTGGAATGTAAGCAAATATCTCTGTGAAAACTTCCACTCTTaGGTAGATACAGCAGGTTCCAGCAGGCAAAATATTCTTCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LHWNVSKYLCENFHS*VDTAGSSRQNILLQ Trigger: CTGCAGAAGAATATTTTGCCTGCTGGAACCTGCTGTATCTACTCAAGAGTGGAAGTTTTCACAGAGATATTTGCTTACATTCCAGTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000536086.2 ENST00000632814.1 |
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| CDS CCA 72 bp | TCCAGCAGGCAAAATATTCTTCTGCAGCAGCTCATATaGATAGATGGAGTCTATTCCCCTCCACATCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SSRQNILLQQLI*IDGVYSPPHPN Trigger: GTTTGGATGTGGAGGGGAATAGACTCCATCTATCCATATGAGCTGCTGCAGAAGAATATTTTGCCTGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000534923.1 ENST00000539853.5 ENST00000541977.5 ENST00000633091.1 ENST00000634061.1 |
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| CDS TCA 72 bp | GGAAACCAGTTTTTCTGCTTCATATACCGACGATTCTaGGACTCCATTTCACAACTGCTCTCTGCCTCAGTA | + |
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Preference number: 6 (lower is better) Translates to: GNQFFCFIYRRF*DSISQLLSASV Trigger: TACTGAGGCAGAGAGCAGTTGTGAAATGGAGTCTCAGAATCGTCGGTATATGAAGCAGAAAAACTGGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000541456.1 |
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| CDS CCA 72 bp | GCAAAATATTCTTCTGCAGCAGCTCATATGGATAGATaGAGTCTATTCCCCTCCACATCCAAACTAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: AKYSSAAAHMDR*SLFPSTSKLAF Trigger: GAAGGCTAGTTTGGATGTGGAGGGGAATAGACTCCATCTATCCATATGAGCTGCTGCAGAAGAATATTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000534923.1 ENST00000539853.5 ENST00000541977.5 ENST00000633091.1 ENST00000634061.1 |
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| CDS CCA 72 bp | GATCCCTGGAATAAATACCATGTAGCTTCATCTGCCTaGTGTGGCTCCATAAGGAGAGGATTAAGAGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: DPWNKYHVASSA*CGSIRRGLREE Trigger: TTCTTCTCTTAATCCTCTCCTTATGGAGCCACACCAGGCAGATGAAGCTACATGGTATTTATTCCAGGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000546317.1 |
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| CDS TCA 72 bp | ATTTCTTCAAGCTTCAGTCCCCTCACAGGGATAAGATaGGAAACTGATGTTACATGTGCAAGTAGTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: ISSSFSPLTGIR*ETDVTCASSGV Trigger: GACACCACTACTTGCACATGTAACATCAGTTTCTCATCTTATCCCTGTGAGGGGACTGAAGCTTGAAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536086.2 ENST00000632814.1 |
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| CDS CCA 72 bp | AACTGCTTTCCATTTTACCTGTCTCATATGGATAGATaGAGTCTATTCCCCTCCACATCCAAACTAGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: NCFPFYLSHMDR*SLFPSTSKLAF Trigger: GAAGGCTAGTTTGGATGTGGAGGGGAATAGACTCCATCTATCCATATGAGACAGGTAAAATGGAAAGCAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541456.1 |
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| CDS CCA 72 bp | CTGTCCATCTTGCCTTCTGAAGAAGAAGCTTTACACTaGAATGTAAGCAAATATCTCTGTGAAAACTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LSILPSEEEALH*NVSKYLCENFH Trigger: GTGGAAGTTTTCACAGAGATATTTGCTTACATTCCAGTGTAAAGCTTCTTCTTCAGAAGGCAAGATGGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000536086.2 ENST00000632814.1 |
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| CDS TCA 72 bp | AGAAGCTTTACACTGGAATGTAAGCAAATATCTCTGTaGAAACTTCCACTCTTGAGTAGATACAGCAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: RSFTLECKQISL*KLPLLSRYSRF Trigger: GAACCTGCTGTATCTACTCAAGAGTGGAAGTTTTCACAGAGATATTTGCTTACATTCCAGTGTAAAGCTTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000536086.2 ENST00000632814.1 |
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| CDS CAA 90 bp | ACTCCAGTCTTAAAAACTTTGATCACTGTGAGTAACCTGTCCATCTaGCCTTCTGAAGAAGAAGCTTTACACTGGAATGTAAGCAAATAT | + |
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Preference number: 6 (lower is better) Translates to: TPVLKTLITVSNLSI*PSEEEALHWNVSKY Trigger: ATATTTGCTTACATTCCAGTGTAAAGCTTCTTCTTCAGAAGGCAAGATGGACAGGTTACTCACAGTGATCAAAGTTTTTAAGACTGGAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000536086.2 ENST00000632814.1 |
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| CDS TCA 72 bp | TTGAAAACATATCCAAGTGCTTCGACATACCTCATATaGACAGATGCAGTCTTATTCCCCTTCTCTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: LKTYPSASTYLI*TDAVLFPFSSK Trigger: TTTTGAAGAGAAGGGGAATAAGACTGCATCTGTTCATATGAGGTATGTCGAAGCACTTGGATATGTTTTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000541175.1 |
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