Pregenerated sensors for PRG4 (Homo sapiens)
Ensembl gene IDs: ENSG00000116690Ensembl transcript IDs: ENST00000367482.8, ENST00000367483.8, ENST00000367485.4, ENST00000445192.7, ENST00000533951.5, ENST00000635041.1
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCAGACTTGGTGGTGGTGGGTGCAGGCTCCTTGGGGGTGGTGGGTaGAGACTTGATGGTGGTAGGTGTGGGCTCTTTGGGTGTGGTAGA | + |
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Preference number: 5 (lower is better) Translates to: CRLGGGGCRLLGGGG*RLDGGRCGLFGCGR Trigger: TCTACCACACCCAAAGAGCCCACACCTACCACCATCAAGTCTGCACCCACCACCCCCAAGGAGCCTGCACCCACCACCACCAAGTCTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS TCA 90 bp | TCGGGAGTAACTTCAGGCATGAACACATGGGGCCTGAGAAGCATATaGGGTGTTTCTCCTTCAGCACCACCTGCATCTTCACTCTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: SGVTSGMNTWGLRSI*GVSPSAPPASSLFG Trigger: TCCAAAGAGTGAAGATGCAGGTGGTGCTGAAGGAGAAACACCTCATATGCTTCTCAGGCCCCATGTGTTCATGCCTGAAGTTACTCCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 90 bp | GGTTTTGCTGTTGTGATCTTGGGAGATGTGCTGACTTTATTGTGTTaGGTGGTAGACGTGTCAGGAGTTGTGACCTTGAAGTCACCATTG | + |
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Preference number: 5 (lower is better) Translates to: GFAVVILGDVLTLLC*VVDVSGVVTLKSPL Trigger: CAATGGTGACTTCAAGGTCACAACTCCTGACACGTCTACCACCCAACACAATAAAGTCAGCACATCTCCCAAGATCACAACAGCAAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS GCA 90 bp | TGTTGTCTTGTCTTTAGCTGTTGTAGTCATTTCAGGTTTAGTCGCTaGAGGAGTCTTAGTTGTAGGTACACCAGGTTCCTTGGGACTGTT | + |
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Preference number: 5 (lower is better) Translates to: CCLVFSCCSHFRFSR*RSLSCRYTRFLGTV Trigger: AACAGTCCCAAGGAACCTGGTGTACCTACAACTAAGACTCCTGCAGCGACTAAACCTGAAATGACTACAACAGCTAAAGACAAGACAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 90 bp | TTTAGATGTATCAGAATTAGGTGGAAGACTGGGTCTGGGATTTATTaGTTTTGCTGTTGTGATCTTGGGAGATGTGCTGACTTTATTGTG | + |
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Preference number: 5 (lower is better) Translates to: FRCIRIRWKTGSGIY*FCCCDLGRCADFIV Trigger: CACAATAAAGTCAGCACATCTCCCAAGATCACAACAGCAAAACCAATAAATCCCAGACCCAGTCTTCCACCTAATTCTGATACATCTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 90 bp | TTTATTCACTGTCAAAGACGTCTCTTTAGATGTATCAGAATTAGGTaGAAGACTGGGTCTGGGATTTATTGGTTTTGCTGTTGTGATCTT | + |
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Preference number: 5 (lower is better) Translates to: FIHCQRRLFRCIRIR*KTGSGIYWFCCCDL Trigger: AAGATCACAACAGCAAAACCAATAAATCCCAGACCCAGTCTTCCACCTAATTCTGATACATCTAAAGAGACGTCTTTGACAGTGAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 90 bp | TTGAGGTTTAGGAGTTGTCGCTTTAGAATTAGTAGCTCTGTCTTTTaGTTTAGCTGTTTCTTCAGGTTTGTTCATAATCTCAGTGGTAGT | + |
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Preference number: 5 (lower is better) Translates to: LRFRSCRFRISSSVF*FSCFFRFVHNLSGS Trigger: ACTACCACTGAGATTATGAACAAACCTGAAGAAACAGCTAAACCAAAAGACAGAGCTACTAATTCTAAAGCGACAACTCCTAAACCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 90 bp | TACTTTGGGTGCAAGAGTAGTTGTTTTAAGAGTAGTAATTTTGAATaGTGTGGTATCTTGAGTTGTGGTAGATGTTACTTGTGTGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: YFGCKSSCFKSSNFE*CGILSCGRCYLCGC Trigger: ACAACCACACAAGTAACATCTACCACAACTCAAGATACCACACCATTCAAAATTACTACTCTTAAAACAACTACTCTTGCACCCAAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS TCA 72 bp | GGGTGGTGGGTGCGAGCTTCTCGGGGGTGGTGGGCGTaGGCTTCTTGGGGGTGGTGGGTGCAGTCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GWWVRASRGWWA*ASWGWWVQSPW Trigger: CCAAGGAGACTGCACCCACCACCCCCAAGAAGCTCACGCCCACCACCCCCGAGAAGCTCGCACCCACCACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 90 bp | TTGGTGGTGGTGGGTGCAGGCTCCTTGGGGGTGGTGGGTGCAGACTaGATGGTGGTAGGTGTGGGCTCTTTGGGTGTGGTAGATGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LVVVGAGSLGVVGAD*MVVGVGSLGVVDAG Trigger: GCCTGCATCTACCACACCCAAAGAGCCCACACCTACCACCATCAAGTCTGCACCCACCACCCCCAAGGAGCCTGCACCCACCACCACCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS TCA 72 bp | GGCCTTTACAGGAAAGCTCCGCAGTGCAGACTCTCTTaGAATCAGGGCAGCACTCCATGTAGTGTTGACAGT | + |
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Preference number: 6 (lower is better) Translates to: GLYRKAPQCRLS*NQGSTPCSVDS Trigger: ACTGTCAACACTACATGGAGTGCTGCCCTGATTTCAAGAGAGTCTGCACTGCGGAGCTTTCCTGTAAAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 90 bp | TGTTGGGTGGTAGACGTGTCAGGAGTTGTGACCTTGAAGTCACCATaGTCCAATCCACTTCCAGCTTCATCTACAACTGGTGGTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: CWVVDVSGVVTLKSP*SNPLPASSTTGGLG Trigger: CCCCAAACCACCAGTTGTAGATGAAGCTGGAAGTGGATTGGACAATGGTGACTTCAAGGTCACAACTCCTGACACGTCTACCACCCAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000533951.5 ENST00000635041.1 |
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| CDS TCA 72 bp | ACTTCAGGCATGAACACATGGGGCCTGAGAAGCATATaGGGTGTTTCTCCTTCAGCACCACCTGCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TSGMNTWGLRSI*GVSPSAPPASS Trigger: TGAAGATGCAGGTGGTGCTGAAGGAGAAACACCTCATATGCTTCTCAGGCCCCATGTGTTCATGCCTGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 90 bp | ACAGAAACTCTCATAATCGGGACAGCACTTGTCATACTTCTTACATaGGGCGTCGCAGTCACACTCCCTCCCTCTCTCGAAGGACTCAAA | + |
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Preference number: 6 (lower is better) Translates to: TETLIIGTALVILLT*GVAVTLPPSLEGLK Trigger: TTTGAGTCCTTCGAGAGAGGGAGGGAGTGTGACTGCGACGCCCAATGTAAGAAGTATGACAAGTGCTGTCCCGATTATGAGAGTTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000533951.5 ENST00000635041.1 |
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| CDS CAA 90 bp | GGTTTAGTCGCTGCAGGAGTCTTAGTTGTAGGTACACCAGGTTCCTaGGGACTGTTTTCAAGAGCTTTTGGTGTGGGTTCTGCAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: GLVAAGVLVVGTPGS*GLFSRAFGVGSAES Trigger: GCTTTCTGCAGAACCCACACCAAAAGCTCTTGAAAACAGTCCCAAGGAACCTGGTGTACCTACAACTAAGACTCCTGCAGCGACTAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS TCA 72 bp | AGCTTTTGGTGTGGGTTCTGCAGAAAGCTCAGGAGTTaGTTCATCAGGGCTTTTGTGGATAGTGGTAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SFWCGFCRKLRS*FIRAFVDSGRL Trigger: GAGCCTACCACTATCCACAAAAGCCCTGATGAATCAACTCCTGAGCTTTCTGCAGAACCCACACCAAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 72 bp | TTGTGTTGGGTGGTAGACGTGTCAGGAGTTGTGACCTaGAAGTCACCATTGTCCAATCCACTTCCAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LCWVVDVSGVVT*KSPLSNPLPAS Trigger: TGAAGCTGGAAGTGGATTGGACAATGGTGACTTCAAGGTCACAACTCCTGACACGTCTACCACCCAACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000533951.5 ENST00000635041.1 |
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| CDS CAA 72 bp | GCTGCAGGAGTCTTAGTTGTAGGTACACCAGGTTCCTaGGGACTGTTTTCAAGAGCTTTTGGTGTGGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: AAGVLVVGTPGS*GLFSRAFGVGS Trigger: AGAACCCACACCAAAAGCTCTTGAAAACAGTCCCAAGGAACCTGGTGTACCTACAACTAAGACTCCTGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 90 bp | CGCAGTGCAGACTCTCTTGAAATCAGGGCAGCACTCCATGTAGTGTaGACAGTTATAATCACAGTTGCAGGTGGCATCTCTAGAATACCC | + |
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Preference number: 6 (lower is better) Translates to: RSADSLEIRAALHVV*TVIITVAGGISRIP Trigger: GGGTATTCTAGAGATGCCACCTGCAACTGTGATTATAACTGTCAACACTACATGGAGTGCTGCCCTGATTTCAAGAGAGTCTGCACTGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 72 bp | CAGGTTCCTTGGGACTGTTTTCAAGAGCTTTTGGTGTaGGTTCTGCAGAAAGCTCAGGAGTTGATTCATCAG | + |
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Preference number: 6 (lower is better) Translates to: QVPWDCFQELLV*VLQKAQELIHQ Trigger: CTGATGAATCAACTCCTGAGCTTTCTGCAGAACCCACACCAAAAGCTCTTGAAAACAGTCCCAAGGAACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 72 bp | TTTGCTGTTGTGATCTTGGGAGATGTGCTGACTTTATaGTGTTGGGTGGTAGACGTGTCAGGAGTTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: FAVVILGDVLTL*CWVVDVSGVVT Trigger: GGTCACAACTCCTGACACGTCTACCACCCAACACAATAAAGTCAGCACATCTCCCAAGATCACAACAGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 72 bp | GTACACCAGGTTCCTTGGGACTGTTTTCAAGAGCTTTaGGTGTGGGTTCTGCAGAAAGCTCAGGAGTTGATT | + |
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Preference number: 6 (lower is better) Translates to: VHQVPWDCFQEL*VWVLQKAQELI Trigger: AATCAACTCCTGAGCTTTCTGCAGAACCCACACCAAAAGCTCTTGAAAACAGTCCCAAGGAACCTGGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 90 bp | CTGACTTTATTGTGTTGGGTGGTAGACGTGTCAGGAGTTGTGACCTaGAAGTCACCATTGTCCAATCCACTTCCAGCTTCATCTACAACT | + |
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Preference number: 6 (lower is better) Translates to: LTLLCWVVDVSGVVT*KSPLSNPLPASSTT Trigger: AGTTGTAGATGAAGCTGGAAGTGGATTGGACAATGGTGACTTCAAGGTCACAACTCCTGACACGTCTACCACCCAACACAATAAAGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000533951.5 ENST00000635041.1 |
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| CDS CAA 90 bp | TGGTTTTGCTGTTGTGATCTTGGGAGATGTGCTGACTTTATTGTGTaGGGTGGTAGACGTGTCAGGAGTTGTGACCTTGAAGTCACCATT | + |
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Preference number: 6 (lower is better) Translates to: WFCCCDLGRCADFIV*GGRRVRSCDLEVTI Trigger: AATGGTGACTTCAAGGTCACAACTCCTGACACGTCTACCACCCAACACAATAAAGTCAGCACATCTCCCAAGATCACAACAGCAAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 90 bp | GCTATTCTTGAGGTAGGGTTCAATTCTGGCATTGTTGATGTCATCTaGCGGGGAGTTGGTGTCGTCTTTGGTTTTCTCACTCTAGGCATT | + |
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Preference number: 6 (lower is better) Translates to: AILEVGFNSGIVDVI*RGVGVVFGFLTLGI Trigger: AATGCCTAGAGTGAGAAAACCAAAGACGACACCAACTCCCCGCAAGATGACATCAACAATGCCAGAATTGAACCCTACCTCAAGAATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 90 bp | TCAGCACCACCTGCATCTTCACTCTTTGGATTTACTTCAACTAGTTaGGAGTTTGGAGTTTGGTTAGGTCTGGTGGTGGTTTGGAGCATG | + |
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Preference number: 6 (lower is better) Translates to: SAPPASSLFGFTSTS*EFGVWLGLVVVWSM Trigger: CATGCTCCAAACCACCACCAGACCTAACCAAACTCCAAACTCCAAACTAGTTGAAGTAAATCCAAAGAGTGAAGATGCAGGTGGTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS TCA 72 bp | TGTTTGGTGGTTTGGGTGAACGTTTGGTTGTTGATTTaGTGGTTTGAGATGCTCCTGAAGGTGGAGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: CLVVWVNVWLLI*WFEMLLKVEVL Trigger: AAGCACCTCCACCTTCAGGAGCATCTCAAACCATCAAATCAACAACCAAACGTTCACCCAAACCACCAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367483.8 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 72 bp | ACAACAGGTAAATGGGAAGTGTTTTCCATGCCATCGTaGTTTTCAGGTACCGTAGGTACCCTTGCCGTAAAG | + |
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Preference number: 6 (lower is better) Translates to: TTGKWEVFSMPS*FSGTVGTLAVK Trigger: CTTTACGGCAAGGGTACCTACGGTACCTGAAAACAACGATGGCATGGAAAACACTTCCCATTTACCTGTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000533951.5 ENST00000635041.1 |
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| CDS CAA 72 bp | TGTTGTGATCTTGGGAGATGTGCTGACTTTATTGTGTaGGGTGGTAGACGTGTCAGGAGTTGTGACCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: CCDLGRCADFIV*GGRRVRSCDLE Trigger: TTCAAGGTCACAACTCCTGACACGTCTACCACCCAACACAATAAAGTCAGCACATCTCCCAAGATCACAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 72 bp | GACTCTCTTGAAATCAGGGCAGCACTCCATGTAGTGTaGACAGTTATAATCACAGTTGCAGGTGGCATCTCT | + |
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Preference number: 6 (lower is better) Translates to: DSLEIRAALHVV*TVIITVAGGIS Trigger: AGAGATGCCACCTGCAACTGTGATTATAACTGTCAACACTACATGGAGTGCTGCCCTGATTTCAAGAGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS TCA 72 bp | GGTTTGGGTGAACGTTTGGTTGTTGATTTGATGGTTTaGGATGCTCCTGAAGGTGGAGGTGCTTTCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: GLGERLVVDLMV*DAPEGGGAFFE Trigger: TTCAAAGAAAGCACCTCCACCTTCAGGAGCATCTCAAACCATCAAATCAACAACCAAACGTTCACCCAAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367483.8 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 72 bp | ATCAGAATTAGGTGGAAGACTGGGTCTGGGATTTATTaGTTTTGCTGTTGTGATCTTGGGAGATGTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: IRIRWKTGSGIY*FCCCDLGRCAD Trigger: GTCAGCACATCTCCCAAGATCACAACAGCAAAACCAATAAATCCCAGACCCAGTCTTCCACCTAATTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 72 bp | TTGCGCAAAGTAGTCAGTCCATCTACTGGCTTACCATaGCATATATTGGTCTCATCGGAAAGCATGGGATTG | + |
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Preference number: 6 (lower is better) Translates to: LRKVVSPSTGLP*HILVSSESMGL Trigger: CAATCCCATGCTTTCCGATGAGACCAATATATGCAATGGTAAGCCAGTAGATGGACTGACTACTTTGCGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 72 bp | AGAAGAAGAGGAAGAGGAGGAGGAGGAGGAGGACTCTaGATTTTCAGAAACAGAATGTTCTTCTGCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: RRRGRGGGGGGL*IFRNRMFFCTE Trigger: TTCTGTGCAGAAGAACATTCTGTTTCTGAAAATCAAGAGTCCTCCTCCTCCTCCTCCTCTTCCTCTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533951.5 |
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| CDS CAA 90 bp | TTTATTGGTTTTGCTGTTGTGATCTTGGGAGATGTGCTGACTTTATaGTGTTGGGTGGTAGACGTGTCAGGAGTTGTGACCTTGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: FIGFAVVILGDVLTL*CWVVDVSGVVTLKS Trigger: TGACTTCAAGGTCACAACTCCTGACACGTCTACCACCCAACACAATAAAGTCAGCACATCTCCCAAGATCACAACAGCAAAACCAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 72 bp | TTTGGATTTACTTCAACTAGTTTGGAGTTTGGAGTTTaGTTAGGTCTGGTGGTGGTTTGGAGCATGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FGFTSTSLEFGV*LGLVVVWSMAS Trigger: AGAAGCCATGCTCCAAACCACCACCAGACCTAACCAAACTCCAAACTCCAAACTAGTTGAAGTAAATCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 72 bp | AAGGTGGAGGTGCTTTCTTTGAAGATGGTGGTGATGTaGGATTATGCACTTCTGCACAGAAACTCTCATAAT | + |
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Preference number: 6 (lower is better) Translates to: KVEVLSLKMVVM*DYALLHRNSHN Trigger: ATTATGAGAGTTTCTGTGCAGAAGTGCATAATCCCACATCACCACCATCTTCAAAGAAAGCACCTCCACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000367483.8 ENST00000445192.7 ENST00000635041.1 |
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| CDS CAA 90 bp | GCAGTTGTAGTTTCAGGTGTAGTACGTAAGTCTCTTTCTGTTGTCTaGTCTTTAGCTGTTGTAGTCATTTCAGGTTTAGTCGCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AVVVSGVVRKSLSVV*SLAVVVISGLVAAG Trigger: TCCTGCAGCGACTAAACCTGAAATGACTACAACAGCTAAAGACAAGACAACAGAAAGAGACTTACGTACTACACCTGAAACTACAACTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 72 bp | ATTGTCCAATCCACTTCCAGCTTCATCTACAACTGGTaGTTTGGGGGTAGGTTTCTTTTTAGTTCTGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: IVQSTSSFIYNW*FGGRFLFSSVL Trigger: AAGAACAGAACTAAAAAGAAACCTACCCCCAAACCACCAGTTGTAGATGAAGCTGGAAGTGGATTGGACAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000533951.5 ENST00000635041.1 |
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| CDS CAA 72 bp | GTGTTTCTCCTTCAGCACCACCTGCATCTTCACTCTTaGGATTTACTTCAACTAGTTTGGAGTTTGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: VFLLQHHLHLHS*DLLQLVWSLEF Trigger: AAACTCCAAACTCCAAACTAGTTGAAGTAAATCCAAAGAGTGAAGATGCAGGTGGTGCTGAAGGAGAAACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 72 bp | TGTCAAAGACGTCTCTTTAGATGTATCAGAATTAGGTaGAAGACTGGGTCTGGGATTTATTGGTTTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: CQRRLFRCIRIR*KTGSGIYWFCC Trigger: ACAGCAAAACCAATAAATCCCAGACCCAGTCTTCCACCTAATTCTGATACATCTAAAGAGACGTCTTTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS TCA 72 bp | GTTTTAAGAGTAGTAATTTTGAATGGTGTGGTATCTTaGGTTGTGGTAGATGTTACTTGTGTGGTTGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: VLRVVILNGVVS*VVVDVTCVVVA Trigger: AGCTACAACCACACAAGTAACATCTACCACAACTCAAGATACCACACCATTCAAAATTACTACTCTTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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| CDS CCA 72 bp | TGCAAGAGTAGTTGTTTTAAGAGTAGTAATTTTGAATaGTGTGGTATCTTGAGTTGTGGTAGATGTTACTTG | + |
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Preference number: 6 (lower is better) Translates to: CKSSCFKSSNFE*CGILSCGRCYL Trigger: CAAGTAACATCTACCACAACTCAAGATACCACACCATTCAAAATTACTACTCTTAAAACAACTACTCTTGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000367482.8 ENST00000367483.8 ENST00000367485.4 ENST00000445192.7 ENST00000635041.1 |
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