RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PREX2 (Homo sapiens)

Ensembl gene IDs: ENSG00000046889

Ensembl transcript IDs: ENST00000288368.5, ENST00000517617.1, ENST00000520235.1, ENST00000522247.5, ENST00000529398.5

Found 379 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTaGCTTTGTGCAAGTCACTGGGTTATTCTTTGCTTTGGTTCCTCA +
Preference number: 1 (lower is better)
Translates to: RLPGFKFWFYPLSIM*LCASHWVILCFGSS
Trigger: TGAGGAACCAAAGCAAAGAATAACCCAGTGACTTGCACAAAGTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CCA 90 bp GTCAATCATGTGACTTTGTGCAAGTCACTGGGTTATTCTTTGCTTTaGTTCCTCAACTCTAAAAATGGGCGCGATAAAAAGAGTACCATG +
Preference number: 1 (lower is better)
Translates to: VNHVTLCKSLGYSLL*FLNSKNGRDKKSTM
Trigger: CATGGTACTCTTTTTATCGCGCCCATTTTTAGAGTTGAGGAACCAAAGCAAAGAATAACCCAGTGACTTGCACAAAGTCACATGATTGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 90 bp GATTACTGCTTCCAGGATGGTGATGAGAAAACAGTCATGACAATATaGAAGGACTTGCTAGCTAATCAGCTGTGTTCCTTTATTAGTCCT +
Preference number: 1 (lower is better)
Translates to: DYCFQDGDEKTVMTI*KDLLANQLCSFISP
Trigger: AGGACTAATAAAGGAACACAGCTGATTAGCTAGCAAGTCCTTTCATATTGTCATGACTGTTTTCTCATCACCATCCTGGAAGCAGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CCA 90 bp CAGCAAAGTAGTGTCAGTGATCAAAAGACCAGGTACATTTACACATaGTTGGACAGCTCTGATGCTTACAGTAAGACATTCATTCAATAC +
Preference number: 1 (lower is better)
Translates to: QQSSVSDQKTRYIYT*LDSSDAYSKTFIQY
Trigger: GTATTGAATGAATGTCTTACTGTAAGCATCAGAGCTGTCCAACCATGTGTAAATGTACCTGGTCTTTTGATCACTGACACTACTTTGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 90 bp TTTTGTTCTAAATTAGTTATTTCTCAATGGCAGAGCCAGGTCAGTTaGTTCCAGATTGAACAGCAAAGTAGTGTCAGTGATCAAAAGACC +
Preference number: 1 (lower is better)
Translates to: FCSKLVISQWQSQVS*FQIEQQSSVSDQKT
Trigger: GGTCTTTTGATCACTGACACTACTTTGCTGTTCAATCTGGAATCAACTGACCTGGCTCTGCCATTGAGAAATAACTAATTTAGAACAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 90 bp CAGCTGTGCCTTGCACAAAGTGAATTCTCAAAAACATTTTTCGGATaGATGCTTGATCAGATAGCATTTATCCTGTTATTCGCACCTAAA +
Preference number: 1 (lower is better)
Translates to: QLCLAQSEFSKTFFG*MLDQIAFILLFAPK
Trigger: TTTAGGTGCGAATAACAGGATAAATGCTATCTGATCAAGCATTCATCCGAAAAATGTTTTTGAGAATTCACTTTGTGCAAGGCACAGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR GCA 90 bp TATAGCACACAGTCTATATTGTCCTTAACATTTCTCATGATGATTTaGAAGATGTCGCCAGGTTTCTTCAATAATGGCCTTCTTCAAGAG +
Preference number: 1 (lower is better)
Translates to: YSTQSILSLTFLMMI*KMSPGFFNNGLLQE
Trigger: CTCTTGAAGAAGGCCATTATTGAAGAAACCTGGCGACATCTTGCAAATCATCATGAGAAATGTTAAGGACAATATAGACTGTGTGCTATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CCA 90 bp AAAGTAGTGTCAGTGATCAAAAGACCAGGTACATTTACACATGGTTaGACAGCTCTGATGCTTACAGTAAGACATTCATTCAATACATTG +
Preference number: 1 (lower is better)
Translates to: KVVSVIKRPGTFTHG*TALMLTVRHSFNTL
Trigger: CAATGTATTGAATGAATGTCTTACTGTAAGCATCAGAGCTGTCCAACCATGTGTAAATGTACCTGGTCTTTTGATCACTGACACTACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCCTGGTTCCCCTCCCTaGTCCCCAGGGCACTTCCCT +
Preference number: 2 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDPGSPP*SPGHFP
Trigger: AGGGAAGTGCCCTGGGGATCAGGGAGGGGAACCAGG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAGGTGGAGGTTGCAGTaGGCCAAGATTGCACCACCG +
Preference number: 2 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDRWRLQ*AKIAPP
Trigger: CGGTGGTGCAATCTTGGCTCACTGCAACCTCCACCT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGGGTGGGTGGATCACTTaGTGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: VLAVFEGALVIEEHVALRGGWIT*CQEFKT
Trigger: GGTCTTGAACTCCTGACATCAAGTGATCCACCCACC...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCCCTTGTCAATCATGTaGCTTTGTGCAAGTCACTGG +
Preference number: 2 (lower is better)
Translates to: VLAVFEGALVIEEHVALRPLSIM*LCASHW
Trigger: CCAGTGACTTGCACAAAGTCACATGATTGACAAGGG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGGCCCAAGGAAGCCATaGCCATTGCAGACACCAAAA +
Preference number: 2 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYGPRKP*PLQTPK
Trigger: TTTTGGTGTCTGCAATGGGCATGGCTTCCTTGGGCC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGCAGTGAGCCAAGATTaGACCACCGCACTCCAGTCT +
Preference number: 2 (lower is better)
Translates to: LYMDFSQKSLELLCQITIAVSQD*TTALQS
Trigger: AGACTGGAGTGCGGTGGTGCAATCTTGGCTCACTGC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTAGCACCCAGTATTCATaGCCCAAGGAAGCCATGCCC +
Preference number: 2 (lower is better)
Translates to: LYMDFSQKSLELLCQITISTQYS*PKEAMP
Trigger: GGGCATGGCTTCCTTGGGCCATGAATACTGGGTGCT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTACAGGCAAAGCATTTaGAGGTATTACTGGGCATGT +
Preference number: 2 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDYRQSI*RYYWAC
Trigger: ACATGCCCAGTAATACCTCCAAATGCTTTGCCTGTA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CAA 90 bp TCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTaGTGCAAGTCACTGGGTTATTCTTTGCTTTGGTTCCTCAACTCT +
Preference number: 2 (lower is better)
Translates to: SWVQILVLPLVNHVT*CKSLGYSLLWFLNS
Trigger: AGAGTTGAGGAACCAAAGCAAAGAATAACCCAGTGACTTGCACAAAGTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR TCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGCAGCTAGAAGAAAGTaGGTCCTGCTGGAGGCCTTA +
Preference number: 2 (lower is better)
Translates to: LYMDFSQKSLELLCQITIAARRK*VLLEAL
Trigger: TAAGGCCTCCAGCAGGACTCACTTTCTTCTAGCTGC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTTCTCATGATGATTTaGAAGATGTCGCCAGGTTTC +
Preference number: 2 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDFLMMI*KMSPGF
Trigger: GAAACCTGGCGACATCTTGCAAATCATCATGAGAAA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACACAGTCATGACAATATaGAAGGACTTGCTAGCTAAT +
Preference number: 2 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDTVMTI*KDLLAN
Trigger: ATTAGCTAGCAAGTCCTTTCATATTGTCATGACTGT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTGCCCCATGAAATATaGCAAAGTACAACTGAAATC +
Preference number: 2 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDLPHEI*QSTTEI
Trigger: GATTTCAGTTGTACTTTGCCATATTTCATGGGGCAA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCCTGGGTTCAAATTTTaGTTCTACCCCTTGTCAATC +
Preference number: 2 (lower is better)
Translates to: VLAVFEGALVIEEHVALRPGFKF*FYPLSI
Trigger: GATTGACAAGGGGTAGAACCAAAATTTGAACCCAGG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR GCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCACTGGGTTATTCTTTaGTTTGGTTCCTCAACTCTA +
Preference number: 2 (lower is better)
Translates to: VLAVFEGALVIEEHVALRHWVIL*FGSSTL
Trigger: TAGAGTTGAGGAACCAAAGCAAAGAATAACCCAGTG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR GCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGAATCATGTGACTTTGTaGAAGTCACTGGGTTATTCT +
Preference number: 2 (lower is better)
Translates to: VLAVFEGALVIEEHVALRNHVTL*KSLGYS
Trigger: AGAATAACCCAGTGACTTGCACAAAGTCACATGATT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAACCATTTTAATGAATaGGAGAGGAGGCATGGTGGT +
Preference number: 2 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYNHFNE*ERRHGG
Trigger: ACCACCATGCCTCCTCTCCCATTCATTAAAATGGTT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CAA 90 bp CAAAGTAGTGTCAGTGATCAAAAGACCAGGTACATTTACACATGGTaGGACAGCTCTGATGCTTACAGTAAGACATTCATTCAATACATT +
Preference number: 2 (lower is better)
Translates to: QSSVSDQKTRYIYTW*DSSDAYSKTFIQYI
Trigger: AATGTATTGAATGAATGTCTTACTGTAAGCATCAGAGCTGTCCAACCATGTGTAAATGTACCTGGTCTTTTGATCACTGACACTACTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAGCTGAACTGTCTGATTaGACTTCTATCCATTTCCAG +
Preference number: 2 (lower is better)
Translates to: PCASINYKSPNGPFKVQIAELSD*TSIHFQ
Trigger: CTGGAAATGGATAGAAGTTCAATCAGACAGTTCAGC...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATATGGGAGAGGAGGCATaGTGGTTAATTTTTAAATCT +
Preference number: 2 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYMGEEA*WLIFKS
Trigger: AGATTTAAAAATTAACCACCATGCCTCCTCTCCCAT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CAA 90 bp GGTTGGACAGCTCTGATGCTTACAGTAAGACATTCATTCAATACATaGAACAACTCGATTTGTCGTACATTCATACAAAACAAAACAATC +
Preference number: 2 (lower is better)
Translates to: GWTALMLTVRHSFNT*NNSICRTFIQNKTI
Trigger: GATTGTTTTGTTTTGTATGAATGTACGACAAATCGAGTTGTTCAATGTATTGAATGAATGTCTTACTGTAAGCATCAGAGCTGTCCAACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR GCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAAATGACTTTCTCTCTTaGAAATGGGGGACTGAAAAT +
Preference number: 2 (lower is better)
Translates to: PCASINYKSPNGPFKVQINDFLS*KWGTEN
Trigger: ATTTTCAGTCCCCCATTTGCAAGAGAGAAAGTCATT...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATATTGATGTATCTTCAGTaGAGAATGTTTAGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: PCASINYKSPNGPFKVQILMYLQ*RMFSQH
Trigger: ATGCTGGCTAAACATTCTCCACTGAAGATACATCAA...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CCA 72 bp TCCCCAGGGCCATTATGGCACAGCACCCAGTATTCATaGCCCAAGGAAGCCATGCCCATTGCAGACACCAAA +
Preference number: 3 (lower is better)
Translates to: SPGPLWHSTQYS*PKEAMPIADTK
Trigger: TTTGGTGTCTGCAATGGGCATGGCTTCCTTGGGCCATGAATACTGGGTGCTGTGCCATAATGGCCCTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 72 bp TATCTCTTCTCAGCGAGAGGAGCAAGCTATCCTGAGTaGAGCAGGCCTTGTGTCTACATAACAATTGCTCAA +
Preference number: 3 (lower is better)
Translates to: YLFSARGASYPE*SRPCVYITIAQ
Trigger: TTGAGCAATTGTTATGTAGACACAAGGCCTGCTTCACTCAGGATAGCTTGCTCCTCTCGCTGAGAAGAGATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACATGATGGTGTATTCTTaGAAGAGTCTGACCTCTCAT +
Preference number: 3 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDMMVYS*KSLTSH
Trigger: ATGAGAGGTCAGACTCTTCAAAGAATACACCATCAT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 72 bp AATTTGCTGCAAGAAGAGTGGCCAATGAATGCACAATaGACCCAAGCCACCAGAAGAATGTGTTTTAAAGAG +
Preference number: 3 (lower is better)
Translates to: NLLQEEWPMNAQ*TQATRRMCFKE
Trigger: CTCTTTAAAACACATTCTTCTGGTGGCTTGGGTTCATTGTGCATTCATTGGCCACTCTTCTTGCAGCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAGGAAGCCATGCCCATaGCAGACACCAAAAATAGCA +
Preference number: 3 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYRKPCP*QTPKIA
Trigger: TGCTATTTTTGGTGTCTGCAATGGGCATGGCTTCCT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGGTCAATCATGTGACTTaGTGCAAGTCACTGGGTTAT +
Preference number: 3 (lower is better)
Translates to: VLAVFEGALVIEEHVALRVNHVT*CKSLGY
Trigger: ATAACCCAGTGACTTGCACAAAGTCACATGATTGAC...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGATTACATGTGTCCACTaGGGAAAGATGAAAACAAGC +
Preference number: 3 (lower is better)
Translates to: VLAVFEGALVIEEHVALRITCVH*GKMKTS
Trigger: GCTTGTTTTCATCTTTCCCAAGTGGACACATGTAAT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 72 bp TTCCAGGATGGTGATGAGAAAACAGTCATGACAATATaGAAGGACTTGCTAGCTAATCAGCTGTGTTCCTTT +
Preference number: 3 (lower is better)
Translates to: FQDGDEKTVMTI*KDLLANQLCSF
Trigger: AAAGGAACACAGCTGATTAGCTAGCAAGTCCTTTCATATTGTCATGACTGTTTTCTCATCACCATCCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 72 bp GGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTaGCTTTGTGCAAGTCACTGGGTTATTCTTTGCTTT +
Preference number: 3 (lower is better)
Translates to: GFKFWFYPLSIM*LCASHWVILCF
Trigger: AAAGCAAAGAATAACCCAGTGACTTGCACAAAGTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CCA 72 bp TCAGTGATCAAAAGACCAGGTACATTTACACATGGTTaGACAGCTCTGATGCTTACAGTAAGACATTCATTC +
Preference number: 3 (lower is better)
Translates to: SVIKRPGTFTHG*TALMLTVRHSF
Trigger: GAATGAATGTCTTACTGTAAGCATCAGAGCTGTCCAACCATGTGTAAATGTACCTGGTCTTTTGATCACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGAGCACACAGTCTATATaGTCCTTAACATTTCTCATG +
Preference number: 3 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSTQSI*SLTFLM
Trigger: CATGAGAAATGTTAAGGACAATATAGACTGTGTGCT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 72 bp AAATTAGTTATTTCTCAATGGCAGAGCCAGGTCAGTTaGTTCCAGATTGAACAGCAAAGTAGTGTCAGTGAT +
Preference number: 3 (lower is better)
Translates to: KLVISQWQSQVS*FQIEQQSSVSD
Trigger: ATCACTGACACTACTTTGCTGTTCAATCTGGAATCAACTGACCTGGCTCTGCCATTGAGAAATAACTAATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 72 bp AGAGAGACATCAGTTCGTGAAGCTGAACTGTCTGATTaGACTTCTATCCATTTCCAGCATAAATATCAAAGT +
Preference number: 3 (lower is better)
Translates to: RETSVREAELSD*TSIHFQHKYQS
Trigger: ACTTTGATATTTATGCTGGAAATGGATAGAAGTTCAATCAGACAGTTCAGCTTCACGAACTGATGTCTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCTGATCACTACTTGTTaGCAATGGGAAGAAAGATTT +
Preference number: 3 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYLITTC*QWEERF
Trigger: AAATCTTTCTTCCCATTGCAAACAAGTAGTGATCAG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR TCA 72 bp AGAGTACCATGTCACGTCATTATTATGAGGATTAAGTaGAGCAATAACAACAGAATACAGGCAAAGCATTTG +
Preference number: 3 (lower is better)
Translates to: RVPCHVIIMRIK*SNNNRIQAKHL
Trigger: CAAATGCTTTGCCTGTATTCTGTTGTTATTGCTTCACTTAATCCTCATAATAATGACGTGACATGGTACTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAGGCGCCCAGCCTGTTaGACAGCTCCGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDRRPAC*TAPRKL
Trigger: CAGTTTCCTCGGAGCTGTGCAACAGGCTGGGCGCCT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGGCTGTCCTCGCTCATaGTCGGCGGCGGTGCGCAGC +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYGCPRS*SAAVRS
Trigger: GCTGCGCACCGCCGCCGACCATGAGCGAGGACAGCC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGCGAGAATGGAAAGTTaGCGCCTCCGCCAACTCCGA +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDARMES*RLRQLR
Trigger: TCGGAGTTGGCGGAGGCGGCAACTTTCCATTCTCGC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATATCACACGGCCGGGGCTaGAGGGGAAGCGGCTTCGGC +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQISHGRG*RGSGFG
Trigger: GCCGAAGCCGCTTCCCCTCCAGCCCCGGCCGTGTGA...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTCCCGCTCGGTCTTCTaGAGCTCGCTGAGCACGCAC +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSRSVF*SSLSTH
Trigger: GTGCGTGCTCAGCGAGCTCCAGAAGACCGAGCGGGA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTGCTGCAGATGCTGGTaGAGGAGGCGATGGAATTCC +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDCCRCW*RRRWNS
Trigger: GGAATTCCATCGCCTCCTTCACCAGCATCTGCAGCA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGGGTTCAAGGCCGCCATaGGCTGCTCAGAGAAGGCAC +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRGSRPP*AAQRRH
Trigger: GTGCCTTCTCTGAGCAGCTCATGGCGGCCTTGAACC...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCCTGGTTCCCCTCCCTaGTCCCCAGGGCACTTCCCT +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYPGSPP*SPGHFP
Trigger: AGGGAAGTGCCCTGGGGATCAGGGAGGGGAACCAGG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGGGGGCGCGGGGCTCTaGAGAGGAAACTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIGGAGL*RGNSWE
Trigger: CTCCCAGGAGTTTCCTCTGCAGAGCCCCGCGCCCCC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGCAGTGAGCCAAGATTaGACCACCGCACTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDAVSQD*TTALQS
Trigger: AGACTGGAGTGCGGTGGTGCAATCTTGGCTCACTGC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATACCCCGGCGGCGAGAATaGAAAGTTGCCGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIPRRRE*KVAASA
Trigger: GGCGGAGGCGGCAACTTTCCATTCTCGCCGCCGGGG...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCCAGCCACCTCCTGCTaGCTTCCCAAGTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDPATSC*LPKFPS
Trigger: AGATGGAAACTTGGGAAGCCAGCAGGAGGTGGCTGG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCATGATGTAACGAGGTaGCAGTCCGTGGCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDHDVTR*QSVASG
Trigger: GCCAGAAGCCACGGACTGCCACCTCGTTACATCATG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATATCTTCTGGAGCTCGCTaGGCACGCACACGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQISSGAR*ARTRAG
Trigger: GCCTGCGCGTGTGCGTGCTCAGCGAGCTCCAGAAGA...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCAGTGCAGGTGTCAGTaGTGTTGGACCCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHQCRCQ*CWTPPS
Trigger: GCTGGGAGGGGTCCAACATCACTGACACCTGCACTG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGAGGTGGAGGTTGCAGTaGGCCAAGATTGCACCACCG +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRRWRLQ*AKIAPP
Trigger: CGGTGGTGCAATCTTGGCTCACTGCAACCTCCACCT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAGGAGCAAGCTATCCTaGGTGAAGCAGGCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDRSKLS*VKQALC
Trigger: ACACAAGGCCTGCTTCACTCAGGATAGCTTGCTCCT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTGCAGAGGAAACTCCTaGGAGTGGGGGCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYCRGNS*EWGLRP
Trigger: TGGCCGGAGCCCCCACTCCCAGGAGTTTCCTCTGCA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAGCTTCTCCAGGTCCTTaGCGCTCTCGGCGCGGCTGT +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIASPGP*RSRRGC
Trigger: ACAGCCGCGCCGAGAGCGCCAAGGACCTGGAGAAGC...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTCATTGCCTCTTCTCTaGTGCGGCAATCTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDSLPLL*CGNLPV
Trigger: CACAGGGAGATTGCCGCACCAGAGAAGAGGCAATGA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCCTGTTCAGAGATCATaGCCCAGGTATCTTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDPVQRS*PRYLAP
Trigger: TGGAGCAAGATACCTGGGTCATGATCTCTGAACAGG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACACAGTCTTCCATGTATaGCCAGCAGACTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDTVFHV*PADCWQ
Trigger: CTGCCAACAGTCTGCTGGTCATACATGGAAGACTGT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTACGCGCAGGCGAAGCTaGTTCTCCAGGTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITITRRRS*FSRSLA
Trigger: CGCCAAGGACCTGGAGAAGCAGCTTCGCCTGCGCGT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATACCAGGAACTCCAGCGTaGCCACATAGTCCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIPGTPA*PHSPAR
Trigger: CCGAGCGGGACTATGTGGGCACGCTGGAGTTCCTGG...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCTCAGGGTGCACCGATaGACACCGCTGCTGCACATG +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYLRVHR*TPLLHM
Trigger: CATGTGCAGCAGCGGTGTGCATCGGTGCACCCTGAG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCTTGTACAGCCTTGGTaGAGACTGTGGAGTCCGGTC +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRLVQPW*RLWSPV
Trigger: GACCGGACTCCACAGTCTGCACCAAGGCTGTACAAG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGGTGGGAGTTGTCCATaGTCAGAACCTGGAAGAAGT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDGGSCP*SEPGRS
Trigger: ACTTCTTCCAGGTTCTGAGCATGGACAACTCCCACC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCCTGCATTCGCTATCTaGTCCAGCCACCTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHPAFAI*SSHLLL
Trigger: CAGCAGGAGGTGGCTGGACCAGATAGCGAATGCAGG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCCTTGGTGCAGACTGTaGAGTCCGGTCTCTGACTCC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHPWCRL*SPVSDS
Trigger: GGAGTCAGAGACCGGACTCCACAGTCTGCACCAAGG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTCAGTTTGTTGGCCATaGCCACAGATTTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDSVCWP*PQICRS
Trigger: GGACCTACAAATCTGTGGTCATGGCCAACAAACTGA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAATGCACTGTCCAGGGTaGAGACCAGCTGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIMHCPG*RPAAAA
Trigger: GGCTGCAGCAGCTGGTCTTCACCCTGGACAGTGCAT...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTCCTGCTATCCAACTaGACACCAAATGCACTTCCC +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDFLLSN*TPNALP
Trigger: GGGAAGTGCATTTGGTGTTCAGTTGGATAGCAGGAA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCAGCTCCGAGGAAACTaGCAGCAGTCCAACCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYQLRGN*QQSNPR
Trigger: TCTGGGGTTGGACTGCTGTCAGTTTCCTCGGAGCTG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGGCAAGAGAATGGCTTaGACCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHGKRMA*TQEVEV
Trigger: AACCTCCACCTCCTGGGTTCAAGCCATTCTCTTGCC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGAGGGCTTCCATCACTaGTGCATAGTCACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDEGFHH*CIVTVF
Trigger: AAACACAGTGACTATGCAGCAGTGATGGAAGCCCTC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCCTCTTCCTACAGCATaGACAACAGAAGGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDPLPTA*TTEGPN
Trigger: ATTTGGCCCTTCTGTTGTGCATGCTGTAGGAAGAGG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGTGAAGACCAGCTGCTaGAGCCACAGTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHVKTSC*SHSSSS
Trigger: GGAAGAGGAACTGTGGCTGCAGCAGCTGGTCTTCAC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCAAGAGTCCGGACGCTaGTGGGAAGATTCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRQESGR*WEDSKD
Trigger: ATCCTTGGAATCTTCCCAGCAGCGTCCGGACTCTTG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAACAGACAGCTTTCATaGCTTGGAGGGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDNRQLS*LGGLPS
Trigger: TGATGGAAGCCCTCCAAGCCATGAAAGCTGTCTGTT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTGCAATCCTCGGCCTaGAGTGAGATACTTGGTTTG +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDLQSSA*SEILGL
Trigger: CAAACCAAGTATCTCACTCCAGGCCGAGGATTGCAA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGTGGCCACAAGAGTCTaGCAGAAAACCATGTCTCTA +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDVATRV*QKTMSL
Trigger: TAGAGACATGGTTTTCTGCCAGACTCTTGTGGCCAC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCGAGGTGGCAGTCCGTaGCTTCTGGCCAGAATGATG +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYRGGSP*LLARMM
Trigger: CATCATTCTGGCCAGAAGCCACGGACTGCCACCTCG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTCCAGCTGGGGGAGGTaGCTCGCACAGCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITISSWGR*LAQLVQ
Trigger: CTGTACAAGCTGTGCGAGCCACCTCCCCCAGCTGGA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CAA 72 bp TTCCCCCACCTGTTCTGCTTCATGCAGGGTGAAACTTaGCTGAGGCTCATCACTAAAAGTTCAAACATTCGA +
Preference number: 4 (lower is better)
Translates to: FPHLFCFMQGET*LRLITKSSNIR
Trigger: TCGAATGTTTGAACTTTTAGTGATGAGCCTCAGCAAAGTTTCACCCTGCATGAAGCAGAACAGGTGGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCCACCACATTGCACTTaGTGCCAGCTGTGCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYPPHCT*CQLCCR
Trigger: ACGACAGCACAGCTGGCATCAAGTGCAATGTGGTGG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCTTTTAGCAGATACCTaGGACCATGGCCATCCTGCT +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRLLADT*DHGHPA
Trigger: AGCAGGATGGCCATGGTCTCAGGTATCTGCTAAAAG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGTTCATCCAAAGCGTTaGGAGGCCTCATTAGCTTAT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDVHPKR*EASLAY
Trigger: ATAAGCTAATGAGGCCTCTCAACGCTTTGGATGAAC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAGGCTTCTGGCCAGAATaGTGGCTTGCTCCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIGFWPE*WLAPAS
Trigger: TGACGCTGGAGCAAGCCATCATTCTGGCCAGAAGCC...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTTCTTCGCTGTGTTCTaGACTCTTGCTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRFFAVF*TLAPCF
Trigger: GAAGCAGGGAGCAAGAGTTCAGAACACAGCGAAGAA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGGTGGGTGGATCACTTaGTGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHGGWIT*CQEFKT
Trigger: GGTCTTGAACTCCTGACATCAAGTGATCCACCCACC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAATGCTTGTCCCAAGTaGACGCCTTCCTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYNACPK*TPSSGL
Trigger: CAGGCCTGAGGAAGGCGTGCACTTGGGACAAGCATT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACACTGTCAGACTCACATaGTCCTTCTTCCCATCAATG +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDTVRLT*SFFPSM
Trigger: CATTGATGGGAAGAAGGAGCATGTGAGTCTGACAGT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGCCAGAATGATGGCTTaGTCCAGCGTCACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIARMMA*SSVTLR
Trigger: CCTGAGCGTGACGCTGGAGCAAGCCATCATTCTGGC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGGCCCAAGGAAGCCATaGCCATTGCAGACACCAAAA +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHGPRKP*PLQTPK
Trigger: TTTTGGTGTCTGCAATGGGCATGGCTTCCTTGGGCC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAGAAGACTTTACATGCTaGGGAGAGGCTGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIEDFTC*GEAGRR
Trigger: CCTGCGCCCAGCCTCTCCCCAGCATGTAAAGTCTTC...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACATCACTGCTGTGCAGTaGGGAGATTTTAGATTTGGC +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDITAVQ*GDFRFG
Trigger: GCCAAATCTAAAATCTCCCCACTGCACAGCAGTGAT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTCCATCACATTGACATaGCAGTTGGTAGGGCAGAAA +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDSITLT*QLVGQK
Trigger: TTTCTGCCCTACCAACTGCCATGTCAATGTGATGGA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTCCATTTCATCACTGTaGAAATACGAGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDSISSL*KYELHW
Trigger: CCAGTGCAGCTCGTATTTCCACAGTGATGAAATGGA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGAGTCCGGACGCTGCTaGGAAGATTCCAAGGATCTT +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHESGRC*EDSKDL
Trigger: AAGATCCTTGGAATCTTCCCAGCAGCGTCCGGACTC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACAGAAGGCACAGACAGTaGCCACAAGAGTCTGGCAGA +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHRRHRQ*PQESGR
Trigger: TCTGCCAGACTCTTGTGGCCACTGTCTGTGCCTTCT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCTGCACATGATGATGTaGCAGGCGCCCAGCCTGTTG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITILHMMM*QAPSLL
Trigger: CAACAGGCTGGGCGCCTGCCACATCATCATGTGCAG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTCATTCTTCTCCAGCTaGGGGAGGTGGCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITISFFSS*GRWLAQ
Trigger: CTGTGCGAGCCACCTCCCCCAGCTGGAGAAGAATGA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTCCCAGCCTTCAATGTaGGACTGCCATTCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSQPSM*DCHSSK
Trigger: TTTAGAGGAATGGCAGTCTCACATTGAAGGCTGGGA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCCATCACCTCCGTGTTaGTCCGGCCACGAAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIPSPPC*SGHEKG
Trigger: ACCTTTTTCGTGGCCGGATCAACACGGAGGTGATGG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAATTTCCAACAGCCATaGCACAAATTCGCTTCCAAG +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDNFQQP*HKFASK
Trigger: CTTGGAAGCGAATTTGTGTCATGGCTGTTGGAAATT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACAATTTCCTGATGTTCTaGGCAAGAGTCCGGACGCTG +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHNFLMF*ARVRTL
Trigger: CAGCGTCCGGACTCTTGCTCAGAACATCAGGAAATT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTCTGGTTGTACTGTTTaGCCTTTTCCAGTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSGCTV*PFPVRL
Trigger: CAGCCTCACTGGAAAAGGTCAAACAGTACAACCAGA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTGCAAATGGGGGACTaGAAATGTATAGCACACAGT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDLQMGD*KCIAHS
Trigger: ACTGTGTGCTATACATTTTCAGTCCCCCATTTGCAA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGCAAGCTATCCTGAGTaGAGCAGGCCTTGTGTCTAC +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYASYPE*SRPCVY
Trigger: GTAGACACAAGGCCTGCTTCACTCAGGATAGCTTGC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCAGAGCCAGGTCAGTTaGTTCCAGATTGAACAGCAA +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRQSQVS*FQIEQQ
Trigger: TTGCTGTTCAATCTGGAATCAACTGACCTGGCTCTG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCTCCACCTCTTTCAGTaGAGTCTGAAGTTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHLHLFQ*SLKFAQ
Trigger: CTGGGCAAACTTCAGACTGCACTGAAAGAGGTGGAG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTGTGTTCTGAACTCTTaGTCCCTGCTTCCGCATCAC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHCVLNS*SLLPHH
Trigger: GTGATGCGGAAGCAGGGAGCAAGAGTTCAGAACACA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTTCCCCCACCTGTTCTaGTTCATGCAGGGTGAAACT +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHFPHLF*FMQGET
Trigger: AGTTTCACCCTGCATGAAGCAGAACAGGTGGGGGAA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGTCACTGTGTTTCCGTaGAGTCCGCTTCAGCAACTC +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYVTVFP*SPLQQL
Trigger: GAGTTGCTGAAGCGGACTCCACGGAAACACAGTGAC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGATGTGTCCACTGCTATaGAAATCAGCGGTGCCATCA +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRMCPLL*KSAVPS
Trigger: TGATGGCACCGCTGATTTCCATAGCAGTGGACACAT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTTCACTGTCTCTCTTaGCTTTGTGCTCACAAGAAC +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDFHCLS*LCAHKN
Trigger: GTTCTTGTGAGCACAAAGCCAAGAGAGACAGTGAAA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAGATACCTGAGACCATaGCCATCCTGCTGTCCCAGA +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYRYLRP*PSCCPR
Trigger: TCTGGGACAGCAGGATGGCCATGGTCTCAGGTATCT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCTGTTGTCAAACATCTaGTTCAAGGCCGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHLLSNI*FKAAMS
Trigger: GCTCATGGCGGCCTTGAACCAGATGTTTGACAACAG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCAGCTTGTACAGCCTTaGTGCAGACTGTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIQLVQP*CRLWSP
Trigger: CGGACTCCACAGTCTGCACCAAGGCTGTACAAGCTG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAACCATTTTAATGAATaGGAGAGGAGGCATGGTGGT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDNHFNE*ERRHGG
Trigger: ACCACCATGCCTCCTCTCCCATTCATTAAAATGGTT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAGGTACATTTACACATaGTTGGACAGCTCTGATGCT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDRYIYT*LDSSDA
Trigger: AGCATCAGAGCTGTCCAACCATGTGTAAATGTACCT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGTTCCCACTTCTTGTTaGGCATTAGGTTCGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYVPTSC*ALGSGC
Trigger: ACACCCCGAACCTAATGCTCAACAAGAAGTGGGAAC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTCTTTCAGTGCAGTCTaGAGTTTGCCCAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHSFSAV*SLPSSF
Trigger: GAAACTGCTGGGCAAACTTCAGACTGCACTGAAAGA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGGGAAGTTCATCACCTaGGTCCATTTCATCACTGTG +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHGKFIT*VHFITV
Trigger: CACAGTGATGAAATGGACTCAGGTGATGAACTTCCC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTTGAATCCACCTGGCTaGAAAGATGCTCAAGGCAAC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHLNPPG*KDAQGN
Trigger: GTTGCCTTGAGCATCTTTTCAGCCAGGTGGATTCAA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTCCAAGGATCTTGCTTaGTATGAAGCCGTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSKDLA*YEAVAF
Trigger: AAAGGCTACGGCTTCATATCAAGCAAGATCCTTGGA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCGACTTCCTTCTGCTTaGTATGTAAGAGGAACATTT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDRLPSA*YVRGTF
Trigger: AAATGTTCCTCTTACATATCAAGCAGAAGGAAGTCG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAGCAGCTAGAAGAAAGTaGGTCCTGCTGGAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIAARRK*VLLEAL
Trigger: TAAGGCCTCCAGCAGGACTCACTTTCTTCTAGCTGC...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCCCTTGTCAATCATGTaGCTTTGTGCAAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHPLSIM*LCASHW
Trigger: CCAGTGACTTGCACAAAGTCACATGATTGACAAGGG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTATGGAAATCAGCGGTaGCATCATCCACATTCTCCA +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRYGNQR*HHPHSP
Trigger: TGGAGAATGTGGATGATGGCACCGCTGATTTCCATA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGCAGGCTGTAACGTGTaGAATGACACTGGCATGTGT +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYAGCNV*NDTGMC
Trigger: ACACATGCCAGTGTCATTGCACACGTTACAGCCTGC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTGTGGAAATACGAGCTaGACTGGCTGCTGCAGATGC +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITICGNTS*TGCCRC
Trigger: GCATCTGCAGCAGCCAGTGCAGCTCGTATTTCCACA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGCCCTCACAACAGCCTaGCCTTTTAGGAGATTGGTA +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYALTTA*PFRRLV
Trigger: TACCAATCTCCTAAAAGGGCAGGCTGTTGTGAGGGC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCCATCTCATTTTCCTTaGTGTTGTCAAACATCTGGT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDPSHFP*CCQTSG
Trigger: ACCAGATGTTTGACAACAGCAAGGAAAATGAGATGG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTACTGCAAGCTGTGTTTaGACAGGCAGCTGTGCGCTT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITITASCV*TGSCAL
Trigger: AAGCGCACAGCTGCCTGTGCAAACACAGCTTGCAGT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATACAACCCCAGAAGCACTaGAAGCTGTGTTTGCACAGG +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIQPQKH*KLCLHR
Trigger: CCTGTGCAAACACAGCTTGCAGTGCTTCTGGGGTTG...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATACAGCTTTCATGGCTTaGAGGGCTTCCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYTAFMA*RASITA
Trigger: AGCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTCTCCATCTGTCTCTTaGCCTCGTTTATGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSPSVS*PRLCWN
Trigger: GTTCCAACATAAACGAGGCCAAGAGACAGATGGAGA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAGGAATCTTGCTTCGTTaGCCGCCTGTACTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIGILLR*PPVLPA
Trigger: TGCAGGAAGTACAGGCGGCCAACGAAGCAAGATTCC...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCATCTCCAGGGGGCTTaGAGTGAGATTTTTGAAGGT +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHHLQGA*SEIFEG
Trigger: ACCTTCAAAAATCTCACTCCAAGCCCCCTGGAGATG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGACACCATATTCCAGGTaGACATTGTCCACTGTCAGA +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRTPYSR*TLSTVR
Trigger: TCTGACAGTGGACAATGTCCACCTGGAATATGGTGT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTAAATACGAGCTGCACTaGCTGCTGCAGATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIKYELH*LLQMLV
Trigger: CACCAGCATCTGCAGCAGCCAGTGCAGCTCGTATTT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCTTTGTGCAAGTCACTaGGTTATTCTTTGCTTTGGT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDLCASH*VILCFG
Trigger: ACCAAAGCAAAGAATAACCCAGTGACTTGCACAAAG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CAA 72 bp AATCATGTGACTTTGTGCAAGTCACTGGGTTATTCTTaGCTTTGGTTCCTCAACTCTAAAAATGGGCGCGAT +
Preference number: 4 (lower is better)
Translates to: NHVTLCKSLGYS*LWFLNSKNGRD
Trigger: ATCGCGCCCATTTTTAGAGTTGAGGAACCAAAGCAAAGAATAACCCAGTGACTTGCACAAAGTCACATGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CAA 72 bp AATGCATTAAGAAGGCAGACTTCCTGGGTTCAAATTTaGGTTCTACCCCTTGTCAATCATGTGACTTTGTGC +
Preference number: 4 (lower is better)
Translates to: NALRRQTSWVQI*VLPLVNHVTLC
Trigger: GCACAAAGTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTTCTTAATGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACATTTTTGTCAACTTTTaGTGCTGCACACTGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDIFVNF*CCTLVH
Trigger: ATGAACCAGTGTGCAGCATCAAAAGTTGACAAAAAT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGATGTCTTCAATGTTTaGGAACAACATCTTCACTGT +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDDVFNV*EQHLHC
Trigger: ACAGTGAAGATGTTGTTCTCAAACATTGAAGACATC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATACCTTCCTCAGGCCTGTaGATCTCTCCAATTTCCAAC +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIPSSGL*ISPISN
Trigger: GTTGGAAATTGGAGAGATTCACAGGCCTGAGGAAGG...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTCTTGGCAGTTAAGCTaGAGAAACCTTTGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHSWQLS*RNLWAQ
Trigger: TTGAGCCCAAAGGTTTCTTCAGCTTAACTGCCAAGA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCACTGCAAAGGGCACTaGATTTACTCTGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYHCKGH*IYSEGQ
Trigger: CTGACCTTCAGAGTAAATTCAGTGCCCTTTGCAGTG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGAGAAGGTCATCTATTTaGCAAACACACATCTCCACC +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRRRSSI*QTHIST
Trigger: GGTGGAGATGTGTGTTTGTCAAATAGATGACCTTCT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTATCCTCGGCCTGGAGTaGGATACTTGGTTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIILGLE*DTWFGQ
Trigger: TTGACCAAACCAAGTATCTCACTCCAGGCCGAGGAT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGGTTCCATTTCCTGTTaGAATTCTTGCAATCCTCGG +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHGSISC*NSCNPR
Trigger: CCGAGGATTGCAAGAATTTCAACAGGAAATGGAACC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACATGAGAAAACAGTCATaGCAATATGAAAGGACTTGC +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDMRKQS*QYERTC
Trigger: GCAAGTCCTTTCATATTGTCATGACTGTTTTCTCAT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCCAATGAATGCACAATaGACCCAAGCCACCAGAAGA +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYPMNAQ*TQATRR
Trigger: TCTTCTGGTGGCTTGGGTTCATTGTGCATTCATTGG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGAGGGTGAAACTTTGCTaGGGCTCATCACTAAAAGTT +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRRVKLC*GSSLKV
Trigger: AACTTTTAGTGATGAGCCTCAGCAAAGTTTCACCCT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATACTGCTTCATGCAGGGTaGAACTTTGCTGAGGCTCAT +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQILLHAG*NFAEAH
Trigger: ATGAGCCTCAGCAAAGTTTCACCCTGCATGAAGCAG...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGGGCTCAGTTTCCCTTaGTCCGAAGATTTGTTTTCT +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHGLSFP*SEDLFS
Trigger: AGAAAACAAATCTTCGGAGCAAGGGAAACTGAGCCC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTCTAATGAGGATTACTaGTTCCAGGATGGTGATGAG +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSNEDY*FQDGDE
Trigger: CTCATCACCATCCTGGAAGCAGTAATCCTCATTAGA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGTGAGATACTTGGTTTaGTCAAAGGCCCTCACAACA +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHVRYLV*SKALTT
Trigger: TGTTGTGAGGGCCTTTGACCAAACCAAGTATCTCAC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTACAGGCAAAGCATTTaGAGGTATTACTGGGCATGT +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRYRQSI*RYYWAC
Trigger: ACATGCCCAGTAATACCTCCAAATGCTTTGCCTGTA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTTCTCTTTCGGTCTTTaGTCAGATTTCCTTGTCTGC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHFSFGL*SDFLVC
Trigger: GCAGACAAGGAAATCTGATCAAAGACCGAAAGAGAA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGGATCTTGCTTGATATaGAGCCGTAGCCTTTTTGGA +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYGSCLI*SRSLFG
Trigger: TCCAAAAAGGCTACGGCTTCATATCAAGCAAGATCC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGCTGAACTGTCTGATTaGACTTCTATCCATTTCCAG +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHAELSD*TSIHFQ
Trigger: CTGGAAATGGATAGAAGTTCAATCAGACAGTTCAGC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACAGACTGTTGGCAGTATaGATGCTGACATCACTGTTA +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHRLLAV*MLTSLL
Trigger: TAACAGTGATGTCAGCATTCATACTGCCAACAGTCT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGAGCAAAAGACACAGATaGTCAATAACACACAGAGAC +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSKRHR*SITHRD
Trigger: GTCTCTGTGTGTTATTGATCATCTGTGTCTTTTGCT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCAACAATGTGTCCACTaGTATGGAAATCAGCGGTGC +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIQQCVH*YGNQRC
Trigger: GCACCGCTGATTTCCATAGCAGTGGACACATTGTTG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTAACGCCAAATATCATTaGCTCTTCTCTGGTGCGGCA +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITINAKYH*LFSGAA
Trigger: TGCCGCACCAGAGAAGAGGCAATGATATTTGGCGTT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACACCTGGCTGAAAAGATaGTCAAGGCAACTATGTATC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHTWLKR*SRQLCI
Trigger: GATACATAGTTGCCTTGAGCATCTTTTCAGCCAGGT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCACAAGAATAAAGGATaGCCAAAGGCAGCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHHKNKG*PKAARR
Trigger: TCTTCTAGCTGCCTTTGGGCATCCTTTATTCTTGTG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTAGAGTGGCCAATGAATaGACAATGAACCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIRVANE*TMNPSH
Trigger: GTGGCTTGGGTTCATTGTGCATTCATTGGCCACTCT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCTCTGCATTAAATCATaGTACACAGGAAAAGATCTA +
Preference number: 4 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDLCIKS*YTGKDL
Trigger: TAGATCTTTTCCTGTGTAGCATGATTTAATGCAGAG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCTACATAGGCAGCTTTaGATGTGGAGTTTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITILHRQL*MWSLVV
Trigger: CACCACCAAACTCCACATCCAAAGCTGCCTATGTAG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAGAGCTTCTGCCTGCCTaGTTTCTTGGGAGTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIELLPA*FLGSSF
Trigger: AAAAGAACTCCCAAGAAACCAGGCAGGCAGAAGCTC...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CAA 72 bp CAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTaGTGCAAGTCACTGGGTTATTCTTTGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: QILVLPLVNHVT*CKSLGYSLLWF
Trigger: GAACCAAAGCAAAGAATAACCCAGTGACTTGCACAAAGTCACATGATTGACAAGGGGTAGAACCAAAATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGCCAAGTCCATCAGCTaGATCTGGAATTTTCACTGT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIAKSIS*IWNFHC
Trigger: ACAGTGAAAATTCCAGATTCAGCTGATGGACTTGGC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGCACTGAATTTACTCTaGAGGTCAGTAGGAATCACT +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYALNLL*RSVGIT
Trigger: AGTGATTCCTACTGACCTTCAGAGTAAATTCAGTGC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATATTGCTGATGGTGTCATaGCCAGAATCTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQILLMVS*PESSCS
Trigger: TGAACAGGAAGATTCTGGTCATGACACCATCAGCAA...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTTGTCCTGTTTATCATaGGATATGCGAACACTTAAG +
Preference number: 4 (lower is better)
Translates to: VLAVFEGALVIEEHVALRLSCLS*DMRTLK
Trigger: CTTAAGTGTTCGCATATCTCATGATAAACAGGACAA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTTTGACCTTTTCCAGTaGGGCTGCATTTATCTGAGC +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIFDLFQ*GCIYLS
Trigger: GCTCAGATAAATGCAGCCTCACTGGAAAAGGTCAAA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTATGTCCATCTGTAGATaGCTTGCTGTTCTTCAACCG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIMSICR*LAVLQP
Trigger: CGGTTGAAGAACAGCAAGGCATCTACAGATGGACAT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGTGCAGTCTGAAGTTTaGCCAGCAGTTTCTGATAGA +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIVQSEV*PAVSDR
Trigger: TCTATCAGAAACTGCTGGGCAAACTTCAGACTGCAC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCGATGGAATTCCTATTaGTGTTGCAGTCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYRWNSY*CCSHCK
Trigger: CTTACAGTGACTGCAACAGCAATAGGAATTCCATCG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGTGAAAAAGAACACCTaGATTCGCTATCTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIVKKNT*IRYLVQ
Trigger: CTGGACCAGATAGCGAATGCAGGTGTTCTTTTTCAC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTGGCCTCGTTTATGTTaGAACAGACAGCTTTCATGG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIWPRLC*NRQLSW
Trigger: CCATGAAAGCTGTCTGTTCCAACATAAACGAGGCCA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAAGGCAGCTTTGGATGTaGAGTTTGGTGGTGAATTTG +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIRQLWM*SLVVNL
Trigger: CAAATTCACCACCAAACTCCACATCCAAAGCTGCCT...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCCTGGGTTCAAATTTTaGTTCTACCCCTTGTCAATC +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYPGFKF*FYPLSI
Trigger: GATTGACAAGGGGTAGAACCAAAATTTGAACCCAGG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACAGAAGGCAGACTTCCTaGGTTCAAATTTTGGTTCTA +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHRRQTS*VQILVL
Trigger: TAGAACCAAAATTTGAACCCAGGAAGTCTGCCTTCT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAGATTGCAACACTGTTaGGTTACCTCAAAATGTGCA +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYRLQHC*VTSKCA
Trigger: TGCACATTTTGAGGTAACTCAACAGTGTTGCAATCT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTTTCGGATGAATGCTTaGTCAGATAGCATTTATCCT +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHFRMNA*SDSIYP
Trigger: AGGATAAATGCTATCTGATCAAGCATTCATCCGAAA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACGCTTCAAACCATTCATaGTTCTCTTCAGGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHASNHS*FSSGVF
Trigger: AAAAACACCTGAAGAGAAGCATGAATGGTTTGAAGC...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCAGAAATCACTGCTGTaGAGTGGGGAGATTTTAGAT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIQKSLL*SGEILD
Trigger: ATCTAAAATCTCCCCACTGCACAGCAGTGATTTCTG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTTTCTCATGATGATTTaGAAGATGTCGCCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYFLMMI*KMSPGF
Trigger: GAAACCTGGCGACATCTTGCAAATCATCATGAGAAA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTATAAACCCATTGTATaGAATCTTGCTTCGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYYKPIV*NLASLA
Trigger: GGCCAACGAAGCAAGATTCCATACAATGGGTTTATA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGTAATTGAATCCACCTaGCTGAAAAGATGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIVIEST*LKRCSR
Trigger: CCTTGAGCATCTTTTCAGCCAGGTGGATTCAATTAC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTTGCCCCATGAAATATaGCAAAGTACAACTGAAATC +
Preference number: 4 (lower is better)
Translates to: FFNNGLLQEELSIITCVHLPHEI*QSTTEI
Trigger: GATTTCAGTTGTACTTTGCCATATTTCATGGGGCAA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATATCCATGCTCAGAACCTaGAAGAAGTTAGCAGGTTTT +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQISMLRT*KKLAGF
Trigger: AAAACCTGCTAACTTCTTCCAGGTTCTGAGCATGGA...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTAACTTGTCTTTAAAGTaGAGAAAGCAGGTTCCCACT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITINLSLK*RKQVPT
Trigger: AGTGGGAACCTGCTTTCTTCACTTTAAAGACAAGTT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTCGATGTTTCATATTTaGTCCCTCCATTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITISMFHI*SLHFLI
Trigger: GATGAGGAAATGGAGGGATCAAATATGAAACATCGA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR TCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAGGTTTTAGCAGTATTTaGAGGTGCACTGGTTATAGA +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIGFSSI*RCTGYR
Trigger: TCTATAACCAGTGCACCTTCAAATACTGCTAAAACC...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTTTTCAAGGACATGGTaGATAAATCCATTGTCACAG +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYFSRTW*INPLSQ
Trigger: CTGTGACAATGGATTTATGCACCATGTCCTTGAAAA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTGTCTGTTGGTATTATaGCCTCTGATGTCTTACGTT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITICLLVL*PLMSYV
Trigger: AACGTAAGACATCAGAGGGCATAATACCAACAGACA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAAATTCCTATTGCTGTTaGAGTCACTGTAAGAGTCTC +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQINSYCC*SHCKSL
Trigger: GAGACTCTTACAGTGACTGCAACAGCAATAGGAATT...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAATCCAAACTTTCTATaGATGACCTTCCCTTTTAGG +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYNPNFL*MTFPFR
Trigger: CCTAAAAGGGAAGGTCATGCATAGAAAGTTTGGATT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTTGATGTATCTTCAGTaGAGAATGTTTAGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYLMYLQ*RMFSQH
Trigger: ATGCTGGCTAAACATTCTCCACTGAAGATACATCAA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATATTCAATGGAATATCCTaGGGCCATTTTTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIFNGIS*GHFWYR
Trigger: TCTGTACCAAAAATGGCCCCAGGATATTCCATTGAA...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTACATTTACACATGGTTaGACAGCTCTGATGCTTACA +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITITFTHG*TALMLT
Trigger: TGTAAGCATCAGAGCTGTCCAACCATGTGTAAATGT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTAATAATATCCTTCCATaGTCTCTAGTGCTTGTGCAA +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITINNILP*SLVLVQ
Trigger: TTGCACAAGCACTAGAGAGCATGGAAGGATATTATT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCATTTTAATGACCCTTaGATGCCTCTAATGAGGATT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIHFNDP*MPLMRI
Trigger: AATCCTCATTAGAGGCATGCAAGGGTCATTAAAATG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTAATCATGTGACTTTGTaGAAGTCACTGGGTTATTCT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITINHVTL*KSLGYS
Trigger: AGAATAACCCAGTGACTTGCACAAAGTCACATGATT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTGTCTACATAACAATTaGTCAATGATGCACAGACCA +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITICLHNN*SMMHRP
Trigger: TGGTCTGTGCATCATTGAGCAATTGTTATGTAGACA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTTTGATGCTGCACACTaGTTCATTCTGTGTAAGAAT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIFDAAH*FILCKN
Trigger: ATTCTTACACAGAATGAACCAGTGTGCAGCATCAAA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAATGGGAGAGGAGGCATaGTGGTTAATTTTTAAATCT +
Preference number: 4 (lower is better)
Translates to: PCASINYKSPNGPFKVQIMGEEA*WLIFKS
Trigger: AGATTTAAAAATTAACCACCATGCCTCCTCTCCCAT...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
3UTR CAA 72 bp AATGGGGGACTGAAAATGTATAGCACACAGTCTATATaGTCCTTAACATTTCTCATGATGATTTGCAAGATG +
Preference number: 4 (lower is better)
Translates to: NGGLKMYSTQSI*SLTFLMMICKM
Trigger: CATCTTGCAAATCATCATGAGAAATGTTAAGGACAATATAGACTGTGTGCTATACATTTTCAGTCCCCCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTATGACCCAGGTATCTTaGTCCATTCCTAATTTTAAA +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITIMTQVS*SIPNFK
Trigger: TTTAAAATTAGGAATGGAGCAAGATACCTGGGTCAT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR GCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCTTGAGCACTCTCAATaGTATTATAAACCCATTGTA +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITILEHSQ*YYKPIV
Trigger: TACAATGGGTTTATAATAGCATTGAGAGTGCTCAAG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CCA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTCAATATTTGTTCAATaGAATATCCTGGGGCCATTT +
Preference number: 4 (lower is better)
Translates to: LYMDFSQKSLELLCQITISIFVQ*NILGPF
Trigger: AAATGGCCCCAGGATATTCCATTGAACAAATATTGA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp AGCGCGGCGCTGCCCGCCGTGCTGAGCGCTGACCCGCGCGCCCGCTaGTGCCCGGCCCCCGGCGGCGAGAATGGAAAGTTGCCGCCTCCG +
Preference number: 5 (lower is better)
Translates to: SAALPAVLSADPRAR*CPAPGGENGKLPPP
Trigger: CGGAGGCGGCAACTTTCCATTCTCGCCGCCGGGGGCCGGGCAGCAGCGGGCGCGCGGGTCAGCGCTCAGCACGGCGGGCAGCGCCGCGCT
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CCA 90 bp CCTTGGCGCTCTCGGCGCGGCTGTCTCCGCGGCTGTCCTCGCTCATaGTCGGCGGCGGTGCGCAGCGCGGCGCTGCCCGCCGTGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PWRSRRGCLRGCPRS*SAAVRSAALPAVLS
Trigger: GCTCAGCACGGCGGGCAGCGCCGCGCTGCGCACCGCCGCCGACCATGAGCGAGGACAGCCGCGGAGACAGCCGCGCCGAGAGCGCCAAGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp TCGGTCTTCTGGAGCTCGCTGAGCACGCACACGCGCAGGCGAAGCTaGTTCTCCAGGTCCTTGGCGCTCTCGGCGCGGCTGTCTCCGCGG +
Preference number: 5 (lower is better)
Translates to: SVFWSSLSTHTRRRS*FSRSLALSARLSPR
Trigger: CCGCGGAGACAGCCGCGCCGAGAGCGCCAAGGACCTGGAGAAGCAGCTTCGCCTGCGCGTGTGCGTGCTCAGCGAGCTCCAGAAGACCGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000529398.5
CDS TCA 90 bp ACTCCAGCGTGCCCACATAGTCCCGCTCGGTCTTCTGGAGCTCGCTaGGCACGCACACGCGCAGGCGAAGCTGCTTCTCCAGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: TPACPHSPARSSGAR*ARTRAGEAASPGPW
Trigger: CCAAGGACCTGGAGAAGCAGCTTCGCCTGCGCGTGTGCGTGCTCAGCGAGCTCCAGAAGACCGAGCGGGACTATGTGGGCACGCTGGAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000529398.5
CDS TCA 90 bp CGCACAGCTTGTACAGCCTTGGTGCAGACTGTGGAGTCCGGTCTCTaGCTCCCAAATTCTTCGCTGTGTTCTGAACTCTTGCTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: RTACTALVQTVESGL*LPNSSLCSELLLPA
Trigger: AGCAGGGAGCAAGAGTTCAGAACACAGCGAAGAATTTGGGAGTCAGAGACCGGACTCCACAGTCTGCACCAAGGCTGTACAAGCTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS TCA 90 bp TCTCATTTTCCTTGCTGTTGTCAAACATCTGGTTCAAGGCCGCCATaGGCTGCTCAGAGAAGGCACAGACAGTGGCCACAAGAGTCTGGC +
Preference number: 5 (lower is better)
Translates to: SHFPCCCQTSGSRPP*AAQRRHRQWPQESG
Trigger: GCCAGACTCTTGTGGCCACTGTCTGTGCCTTCTCTGAGCAGCTCATGGCGGCCTTGAACCAGATGTTTGACAACAGCAAGGAAAATGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp GTTGGAACAGACAGCTTTCATGGCTTGGAGGGCTTCCATCACTGCTaGATAGTCACTGTGTTTCCGTGGAGTCCGCTTCAGCAACTCCTT +
Preference number: 5 (lower is better)
Translates to: VGTDSFHGLEGFHHC*IVTVFPWSPLQQLL
Trigger: AAGGAGTTGCTGAAGCGGACTCCACGGAAACACAGTGACTATGCAGCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGTCTGTTCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 90 bp GCCATGAGCTGCTCAGAGAAGGCACAGACAGTGGCCACAAGAGTCTaGCAGAAAACCATGTCTCTACGGAGCTGTGTCTCACTATCTGAA +
Preference number: 5 (lower is better)
Translates to: AMSCSEKAQTVATRV*QKTMSLRSCVSLSE
Trigger: TTCAGATAGTGAGACACAGCTCCGTAGAGACATGGTTTTCTGCCAGACTCTTGTGGCCACTGTCTGTGCCTTCTCTGAGCAGCTCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGGCGAGAATGGAAAGTaGCCGCCTCCGCCAACTCCG +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDGENGK*PPPPTP
Trigger: CGGAGTTGGCGGAGGCGGCAACTTTCCATTCTCGCC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS TCA 90 bp CATCACTGTGGAAATACGAGCTGCACTGGCTGCTGCAGATGCTGGTaGAGGAGGCGATGGAATTCCTATTGCTGTTGCAGTCACTGTAAG +
Preference number: 5 (lower is better)
Translates to: HHCGNTSCTGCCRCW*RRRWNSYCCCSHCK
Trigger: CTTACAGTGACTGCAACAGCAATAGGAATTCCATCGCCTCCTTCACCAGCATCTGCAGCAGCCAGTGCAGCTCGTATTTCCACAGTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp TATGTTGGAACAGACAGCTTTCATGGCTTGGAGGGCTTCCATCACTaGTGCATAGTCACTGTGTTTCCGTGGAGTCCGCTTCAGCAACTC +
Preference number: 5 (lower is better)
Translates to: YVGTDSFHGLEGFHH*CIVTVFPWSPLQQL
Trigger: GAGTTGCTGAAGCGGACTCCACGGAAACACAGTGACTATGCAGCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGTCTGTTCCAACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 90 bp TTTTCCTTGCTGTTGTCAAACATCTGGTTCAAGGCCGCCATGAGCTaGTCAGAGAAGGCACAGACAGTGGCCACAAGAGTCTGGCAGAAA +
Preference number: 5 (lower is better)
Translates to: FSLLLSNIWFKAAMS*SEKAQTVATRVWQK
Trigger: TTTCTGCCAGACTCTTGTGGCCACTGTCTGTGCCTTCTCTGAGCAGCTCATGGCGGCCTTGAACCAGATGTTTGACAACAGCAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACTGCTTCTCCAGGTCCTaGGCGCTCTCGGCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHCFSRS*ALSARL
Trigger: CAGCCGCGCCGAGAGCGCCAAGGACCTGGAGAAGCA...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp CCCTCTCTGCTAAGAGCATTTCTTGAGAAGGAAGGTCCTCAGGAATaGAGTGCTGTCTTCCATCCTGGGATATTCCTAAGAGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PSLLRAFLEKEGPQE*SAVFHPGIFLREEE
Trigger: CTCCTCCTCTCTTAGGAATATCCCAGGATGGAAGACAGCACTGCATTCCTGAGGACCTTCCTTCTCAAGAAATGCTCTTAGCAGAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529398.5
CDS CCA 90 bp CCATCTGTCTCTTGGCCTCGTTTATGTTGGAACAGACAGCTTTCATaGCTTGGAGGGCTTCCATCACTGCTGCATAGTCACTGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: PSVSWPRLCWNRQLS*LGGLPSLLHSHCVS
Trigger: GGAAACACAGTGACTATGCAGCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGTCTGTTCCAACATAAACGAGGCCAAGAGACAGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 90 bp TCATCACCTGAGTCCATTTCATCACTGTGGAAATACGAGCTGCACTaGCTGCTGCAGATGCTGGTGAAGGAGGCGATGGAATTCCTATTG +
Preference number: 5 (lower is better)
Translates to: SSPESISSLWKYELH*LLQMLVKEAMEFLL
Trigger: CAATAGGAATTCCATCGCCTCCTTCACCAGCATCTGCAGCAGCCAGTGCAGCTCGTATTTCCACAGTGATGAAATGGACTCAGGTGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS TCA 90 bp AGAGTCCGGACGCTGCTGGGAAGATTCCAAGGATCTTGCTTGATATaGAGCCGTAGCCTTTTTGGACAACTCAGCTTTGGTTCCATTTCC +
Preference number: 5 (lower is better)
Translates to: RVRTLLGRFQGSCLI*SRSLFGQLSFGSIS
Trigger: GGAAATGGAACCAAAGCTGAGTTGTCCAAAAAGGCTACGGCTTCATATCAAGCAAGATCCTTGGAATCTTCCCAGCAGCGTCCGGACTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp ATCTTGCTTCGTTGGCCGCCTGTACTTCCTGCAGGCTGTAACGTGTaGAATGACACTGGCATGTGTCTCTTTGCTGACATTGATTCCATT +
Preference number: 5 (lower is better)
Translates to: ILLRWPPVLPAGCNV*NDTGMCLFADIDSI
Trigger: AATGGAATCAATGTCAGCAAAGAGACACATGCCAGTGTCATTGCACACGTTACAGCCTGCAGGAAGTACAGGCGGCCAACGAAGCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 90 bp CACATTGACATGGCAGTTGGTAGGGCAGAAATCACTGCTGTGCAGTaGGGAGATTTTAGATTTGGCCTGTTTAAAAGTAGGCCAGGCCCT +
Preference number: 5 (lower is better)
Translates to: HIDMAVGRAEITAVQ*GDFRFGLFKSRPGP
Trigger: AGGGCCTGGCCTACTTTTAAACAGGCCAAATCTAAAATCTCCCCACTGCACAGCAGTGATTTCTGCCCTACCAACTGCCATGTCAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000517617.1
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGACAGCTTTCATGGCTaGGAGGGCTTCCATCACTGC +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDDSFHG*EGFHHC
Trigger: GCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGTC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTCCATCACCTCCGTGTaGATCCGGCCACGAAAAAGG +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDSITSV*IRPRKR
Trigger: CCTTTTTCGTGGCCGGATCAACACGGAGGTGATGGA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTGGAATCTTGCTTCGTaGGCCGCCTGTACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDWNLAS*AACTSC
Trigger: GCAGGAAGTACAGGCGGCCAACGAAGCAAGATTCCA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGGGCCAGAATGATGGCTaGCTCCAGCGTCACGCTCAG +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRGQNDG*LQRHAQ
Trigger: CTGAGCGTGACGCTGGAGCAAGCCATCATTCTGGCC...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGGGTGGCTCGCACAGCTaGTACAGCCTTGGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRGGSHS*YSLGAD
Trigger: GTCTGCACCAAGGCTGTACAAGCTGTGCGAGCCACC...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp CCTGGAGTGAGATACTTGGTTTGGTCAAAGGCCCTCACAACAGCCTaGCCTTTTAGGAGATTGGTAATTGAATCCACCTGGCTGAAAAGA +
Preference number: 5 (lower is better)
Translates to: PGVRYLVWSKALTTA*PFRRLVIESTWLKR
Trigger: TCTTTTCAGCCAGGTGGATTCAATTACCAATCTCCTAAAAGGGCAGGCTGTTGTGAGGGCCTTTGACCAAACCAAGTATCTCACTCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGGTTCCCACTTCTTGTaGAGCATTAGGTTCGGGGTG +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDGSHFL*SIRFGV
Trigger: CACCCCGAACCTAATGCTCAACAAGAAGTGGGAACC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CCA 90 bp AATAGGGTGATGTCAAGAAGTGTTAATGGAGTAATCGGGGAGAGCTaGCAGAAGATTCTCTTGCTAGGGGGACTGGCTTTCCAACTTGTA +
Preference number: 5 (lower is better)
Translates to: NRVMSRSVNGVIGES*QKILLLGGLAFQLV
Trigger: TACAAGTTGGAAAGCCAGTCCCCCTAGCAAGAGAATCTTCTGCCAGCTCTCCCCGATTACTCCATTAACACTTCTTGACATCACCCTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529398.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCAGGCAGCTGTGCGCTaGGATCTGATAAACGAGGCT +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRQAAVR*DLINEA
Trigger: AGCCTCGTTTATCAGATCCAAGCGCACAGCTGCCTG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp GGGGCTTGGAGTGAGATTTTTGAAGGTCTTCTTGAGCACTCTCAATaGTATTATAAACCCATTGTATGGAATCTTGCTTCGTTGGCCGCC +
Preference number: 5 (lower is better)
Translates to: GAWSEIFEGLLEHSQ*YYKPIVWNLASLAA
Trigger: GGCGGCCAACGAAGCAAGATTCCATACAATGGGTTTATAATAGCATTGAGAGTGCTCAAGAAGACCTTCAAAAATCTCACTCCAAGCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 90 bp ACGACACCATATTCCAGGTGGACATTGTCCACTGTCAGACTCACATaGTCCTTCTTCCCATCAATGATGGCCATAGTGTTGAATTTGTCA +
Preference number: 5 (lower is better)
Translates to: TTPYSRWTLSTVRLT*SFFPSMMAIVLNLS
Trigger: TGACAAATTCAACACTATGGCCATCATTGATGGGAAGAAGGAGCATGTGAGTCTGACAGTGGACAATGTCCACCTGGAATATGGTGTCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGGCAGGTTCCCACTTCTaGTTGAGCATTAGGTTCGGG +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRAGSHF*LSIRFG
Trigger: CCCGAACCTAATGCTCAACAAGAAGTGGGAACCTGC...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGAAACTTCCATCACATaGACATGGCAGTTGGTAGGG +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDETSIT*TWQLVG
Trigger: CCCTACCAACTGCCATGTCAATGTGATGGAAGTTTC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAGTGAGATACTTGGTTaGGTCAAAGGCCCTCACAAC +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDSEILG*VKGPHN
Trigger: GTTGTGAGGGCCTTTGACCAAACCAAGTATCTCACT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCCTGGAGTGAGATACTaGGTTTGGTCAAAGGCCCTC +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRPGVRY*VWSKAL
Trigger: GAGGGCCTTTGACCAAACCAAGTATCTCACTCCAGG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACACAGCTTGTACAGCCTaGGTGCAGACTGTGGAGTCC +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHTACTA*VQTVES
Trigger: GGACTCCACAGTCTGCACCAAGGCTGTACAAGCTGT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp CAGAAGGTCATCTATTTGACAAACACACATCTCCACCTCTTTCAGTaGAGTCTGAAGTTTGCCCAGCAGTTTCTGATAGATGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: QKVIYLTNTHLHLFQ*SLKFAQQFLIDVLG
Trigger: ACCCAAGACATCTATCAGAAACTGCTGGGCAAACTTCAGACTGCACTGAAAGAGGTGGAGATGTGTGTTTGTCAAATAGATGACCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATACAGGTGTCAGTGATGTaGGACCCCTCCCAGCCTTCA +
Preference number: 5 (lower is better)
Translates to: PCASINYKSPNGPFKVQIQVSVM*DPSQPS
Trigger: TGAAGGCTGGGAGGGGTCCAACATCACTGACACCTG...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAACCAGTCTATCAGTTaGTTGGCCATGACCACAGAT +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDNQSIS*LAMTTD
Trigger: ATCTGTGGTCATGGCCAACAAACTGATAGACTGGTT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCAACGCCAAATATCATaGCCTCTTCTCTGGTGCGGC +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHQRQIS*PLLWCG
Trigger: GCCGCACCAGAGAAGAGGCAATGATATTTGGCGTTG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATACACTGCAAGCTGTGTTaGCACAGGCAGCTGTGCGCT +
Preference number: 5 (lower is better)
Translates to: PCASINYKSPNGPFKVQIHCKLC*HRQLCA
Trigger: AGCGCACAGCTGCCTGTGCAAACACAGCTTGCAGTG...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCCATCTGTAGATGCCTaGCTGTTCTTCAACCGTCTG +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHPSVDA*LFFNRL
Trigger: CAGACGGTTGAAGAACAGCAAGGCATCTACAGATGG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTCCACCACATTGCACTaGATGCCAGCTGTGCTGTCG +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITISTTLH*MPAVLS
Trigger: CGACAGCACAGCTGGCATCAAGTGCAATGTGGTGGA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACTTGGACAACTCAGCTTaGGTTCCATTTCCTGTTGAA +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDLDNSA*VPFPVE
Trigger: TTCAACAGGAAATGGAACCAAAGCTGAGTTGTCCAA...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACGTTCATCTGTCAAGTTaGGTGACAGAAGTGACTGAA +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDVHLSS*VTEVTE
Trigger: TTCAGTCACTTCTGTCACCAAACTTGACAGATGAAC...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTTGGCCTCGTTTATGTaGGAACAGACAGCTTTCATG +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRLASFM*EQTAFM
Trigger: CATGAAAGCTGTCTGTTCCAACATAAACGAGGCCAA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTTGATTCCATTCACCTaGATAATGCACTGTCCAGGG +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRLIPFT*IMHCPG
Trigger: CCCTGGACAGTGCATTATCAAGGTGAATGGAATCAA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACATCTTTTCCACCACATaGCACTTGATGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHIFSTT*HLMPAV
Trigger: CACAGCTGGCATCAAGTGCAATGTGGTGGAAAAGAT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGCCCTGAGCTTCTGGTaGTACTGTTTGACCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYALSFW*YCLTFS
Trigger: GGAAAAGGTCAAACAGTACAACCAGAAGCTCAGGGC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCTGTGTTCTGAACTCTaGCTCCCTGCTTCCGCATCA +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITILCSEL*LPASAS
Trigger: TGATGCGGAAGCAGGGAGCAAGAGTTCAGAACACAG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCCCAACAGCTGTGCCTaGCACAAAGTGAATTCTCAA +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHPNSCA*HKVNSQ
Trigger: TTGAGAATTCACTTTGTGCAAGGCACAGCTGTTGGG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp GATGCTCAAGGCAACTATGTATCTTGTCCTGTTTATCATGAGATATaGGAACACTTAAGGGAAGTTCATCACCTGAGTCCATTTCATCAC +
Preference number: 5 (lower is better)
Translates to: DAQGNYVSCPVYHEI*EHLREVHHLSPFHH
Trigger: GTGATGAAATGGACTCAGGTGATGAACTTCCCTTAAGTGTTCGCATATCTCATGATAAACAGGACAAGATACATAGTTGCCTTGAGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp AATTCATTCATCTATTTGACAAACACACATCTCCACCTCTTTCAGTaGAGTCTGAAGTTTGCCCAGCAGTTTCTGATAGATGTCTTGGGT +
Preference number: 5 (lower is better)
Translates to: NSFIYLTNTHLHLFQ*SLKFAQQFLIDVLG
Trigger: ACCCAAGACATCTATCAGAAACTGCTGGGCAAACTTCAGACTGCACTGAAAGAGGTGGAGATGTGTGTTTGTCAAATAGATGAATGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517617.1
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACCCTGCATCTCATTTCTaGGATAAAATGTTCCATCAT +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDPASHF*DKMFHH
Trigger: ATGATGGAACATTTTATCCAAGAAATGAGATGCAGG...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCAGTCTATCAGTTTGTaGGCCATGACCACAGATTTG +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHQSISL*AMTTDL
Trigger: CAAATCTGTGGTCATGGCCAACAAACTGATAGACTG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTGGTGCATAAATCCATaGTCACAGAGTCCAACGCCA +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYWCINP*SQSPTP
Trigger: TGGCGTTGGACTCTGTGACAATGGATTTATGCACCA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCTGTCTCTCTTGGCTTaGTGCTCACAAGAACTCTTA +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHLSLLA*CSQELL
Trigger: TAAGAGTTCTTGTGAGCACAAAGCCAAGAGAGACAG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTATTCCAGGTGGACATaGTCCACTGTCAGACTCACA +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYYSRWT*STVRLT
Trigger: TGTGAGTCTGACAGTGGACAATGTCCACCTGGAATA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAGGGCTCAGTTTCCCTaGCTCCGAAGATTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYRAQFP*LRRFVF
Trigger: GAAAACAAATCTTCGGAGCAAGGGAAACTGAGCCCT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATGAAGCCGTAGCCTTTTaGGACAACTCAGCTTTGGTT +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYEAVAF*DNSALV
Trigger: AACCAAAGCTGAGTTGTCCAAAAAGGCTACGGCTTC...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp AAGGCAGACTTCCTGGGTTCAAATTTTGGTTCTACCCCTTGTCAATCATGTGACAGCACACAGTCTATATaGTCCTTAACATTTCTCATG +
Preference number: 5 (lower is better)
Translates to: KADFLGSNFGSTPCQSCDSTQSI*SLTFLM
Trigger: CATGAGAAATGTTAAGGACAATATAGACTGTGTGCT...GTCACATGATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGAAGTCTGCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACATGCAGGGTGAAACTTaGCTGAGGCTCATCACTAAA +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHMQGET*LRLITK
Trigger: TTTAGTGATGAGCCTCAGCAAAGTTTCACCCTGCAT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS TCA 90 bp GGCAATCTCCCTGTGCAATTAACCAGTCTATCAGTTTGTTGGCCATaGCCACAGATTTGTAGGTCCTTAAATGGTAATCTTTATCTCTTA +
Preference number: 5 (lower is better)
Translates to: GNLPVQLTSLSVCWP*PQICRSLNGNLYLL
Trigger: TAAGAGATAAAGATTACCATTTAAGGACCTACAAATCTGTGGTCATGGCCAACAAACTGATAGACTGGTTAATTGCACAGGGAGATTGCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS TCA 90 bp CTGAAAAGATGCTCAAGGCAACTATGTATCTTGTCCTGTTTATCATaGGATATGCGAACACTTAAGGGAAGTTCATCACCTGAGTCCATT +
Preference number: 5 (lower is better)
Translates to: LKRCSRQLCILSCLS*DMRTLKGSSSPESI
Trigger: AATGGACTCAGGTGATGAACTTCCCTTAAGTGTTCGCATATCTCATGATAAACAGGACAAGATACATAGTTGCCTTGAGCATCTTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTTCCTGTTGAAATTCTaGCAATCCTCGGCCTGGAGT +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIFLLKF*QSSAWS
Trigger: ACTCCAGGCCGAGGATTGCAAGAATTTCAACAGGAA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGTCATTTTCCTTGCTGTaGTCAAACATCTGGTTCAAG +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRSFSLL*SNIWFK
Trigger: CTTGAACCAGATGTTTGACAACAGCAAGGAAAATGA...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACCCGACTTCCTTCTGCTaGATATGTAAGAGGAACATT +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHPTSFC*ICKRNI
Trigger: AATGTTCCTCTTACATATCAAGCAGAAGGAAGTCGG...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGTAAACTTTCAGAGCTaGCCGACTTCCTTCTGCTTG +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIVNFQS*PTSFCL
Trigger: CAAGCAGAAGGAAGTCGGCAAGCTCTGAAAGTTTAC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTTCTGGTTGTACTGTTaGACCTTTTCCAGTGAGGCT +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYFWLYC*TFSSEA
Trigger: AGCCTCACTGGAAAAGGTCAAACAGTACAACCAGAA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAAGGAAGCCATGCCCATaGCAGACACCAAAAATAGCA +
Preference number: 5 (lower is better)
Translates to: PCASINYKSPNGPFKVQIRKPCP*QTPKIA
Trigger: TGCTATTTTTGGTGTCTGCAATGGGCATGGCTTCCT...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCTGGCATGTGTCTCTTaGCTGACATTGATTCCATTC +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITILACVS*LTLIPF
Trigger: GAATGGAATCAATGTCAGCAAAGAGACACATGCCAG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGGCTATTATAAACCCATaGTATGGAATCTTGCTTCGT +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRAIINP*YGILLR
Trigger: ACGAAGCAAGATTCCATACAATGGGTTTATAATAGC...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGATGATGGCCATAGTGTaGAATTTGTCAATAACCTCT +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRMMAIV*NLSITS
Trigger: AGAGGTTATTGACAAATTCAACACTATGGCCATCAT...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAAGCTGAAGAAACCTTaGGGCTCAATCATCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYKLKKP*GSIIFS
Trigger: GGAAAAGATGATTGAGCCCAAAGGTTTCTTCAGCTT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp GTTTTAGCAGTATTTGAAGGTGCACTGGTTATAGAGGAGCATGTAGCATTAAGGCTGATCACTACTTGTTaGCAATGGGAAGAAAGATTT +
Preference number: 5 (lower is better)
Translates to: VLAVFEGALVIEEHVALRLITTC*QWEERF
Trigger: AAATCTTTCTTCCCATTGCAAACAAGTAGTGATCAG...CCTTAATGCTACATGCTCCTCTATAACCAGTGCACCTTCAAATACTGCTAAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACATTTCTCATGATGATTaGCAAGATGTCGCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHISHDD*QDVARF
Trigger: AAACCTGGCGACATCTTGCAAATCATCATGAGAAAT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTCTTCAATAATGGCCTTCTTCAAGAGGAACTCTCCATTATTACATGTGTCCACATGATGGTGTATTCTTaGAAGAGTCTGACCTCTCAT +
Preference number: 5 (lower is better)
Translates to: FFNNGLLQEELSIITCVHMMVYS*KSLTSH
Trigger: ATGAGAGGTCAGACTCTTCAAAGAATACACCATCAT...GTGGACACATGTAATAATGGAGAGTTCCTCTTGAAGAAGGCCATTATTGAAGAA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTATACAGGCAAAGCATTaGGAGGTATTACTGGGCATG +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIIQAKH*EVLLGM
Trigger: CATGCCCAGTAATACCTCCAAATGCTTTGCCTGTAT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTCACTGGGTTATTCTTaGCTTTGGTTCCTCAACTCT +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYSLGYS*LWFLNS
Trigger: AGAGTTGAGGAACCAAAGCAAAGAATAACCCAGTGA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATAAGTCATTTCAAAGCTaGGCCCTAGTACTTAAGCAG +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYKSFQS*ALVLKQ
Trigger: CTGCTTAAGTACTAGGGCCAAGCTTTGAAATGACTT...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATTACATTTACACATGGTaGGACAGCTCTGATGCTTAC +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYYIYTW*DSSDAY
Trigger: GTAAGCATCAGAGCTGTCCAACCATGTGTAAATGTA...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGAGTTACCTCAAAATGTGCATCCAGAGTTGTAAAATGTCCAGGAAACACTATCACTTCCCAAAGAGGTaGATGTTTTGGGATAAGAAA +
Preference number: 5 (lower is better)
Translates to: LSYLKMCIQSCKMSRKHYHFPKR*MFWDKK
Trigger: TTTCTTATCCCAAAACATCAACCTCTTTGGGAAGTG...ATAGTGTTTCCTGGACATTTTACAACTCTGGATGCACATTTTGAGGTAACTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCAGAAGGTCATCTATTaGACAAACACACATCTCCAC +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIQKVIY*TNTHLH
Trigger: GTGGAGATGTGTGTTTGTCAAATAGATGACCTTCTG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTGGTTCCATTTCCTGTaGAAATTCTTGCAATCCTCG +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIWFHFL*KFLQSS
Trigger: CGAGGATTGCAAGAATTTCAACAGGAAATGGAACCA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCTTTGGATGTGGAGTTaGGTGGTGAATTTGACTTGT +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITILWMWS*VVNLTC
Trigger: ACAAGTCAAATTCACCACCAAACTCCACATCCAAAG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATATCCTGGGTTCAAATTTaGGTTCTACCCCTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: PCASINYKSPNGPFKVQISWVQI*VLPLVN
Trigger: ATTGACAAGGGGTAGAACCAAAATTTGAACCCAGGA...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 90 bp CCTTTCCGCCGTTCTCTTTCTTTCAAAATAGCTTCAAACCATTCATaGTTCTCTTCAGGTGTTTTTGCCATACAAACAAACCATTTATTT +
Preference number: 5 (lower is better)
Translates to: PFRRSLSFKIASNHS*FSSGVFAIQTNHLF
Trigger: AAATAAATGGTTTGTTTGTATGGCAAAAACACCTGAAGAGAAGCATGAATGGTTTGAAGCTATTTTGAAAGAAAGAGAACGGCGGAAAGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTGGATGTCTTCAATGTTaGAGAACAACATCTTCACTG +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIGCLQC*RTTSSL
Trigger: CAGTGAAGATGTTGTTCTCAAACATTGAAGACATCC...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTATAATCTTACACCCTTaGAAATCACGTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIIILHP*KSRPAS
Trigger: AGATGCAGGACGTGATTTCAAAGGGTGTAAGATTAT...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTTAAAACATACCCGTTaGCTGTTTCTTTCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITILKHTR*LFLSPF
Trigger: GAAGGGAGAAAGAAACAGCAAACGGGTATGTTTTAA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCAGCCGTTGAGGAAGTaGTTCAAAATGATAACTATC +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIQPLRK*FKMITI
Trigger: GATAGTTATCATTTTGAACAACTTCCTCAACGGCTG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTTCCATTTTTCAGCCGTaGAGGAAGTTGTTCAAAATG +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITISIFQP*RKLFKM
Trigger: CATTTTGAACAACTTCCTCAACGGCTGAAAAATGGA...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAAGTTTGGTGGTGAATTaGACTTGTCCAAGTAGAATG +
Preference number: 5 (lower is better)
Translates to: PCASINYKSPNGPFKVQISLVVN*TCPSRM
Trigger: CATTCTACTTGGACAAGTCAAATTCACCACCAAACT...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATAATTACATGTGTCCACTaGGGAAAGATGAAAACAAGC +
Preference number: 5 (lower is better)
Translates to: PCASINYKSPNGPFKVQIITCVH*GKMKTS
Trigger: GCTTGTTTTCATCTTTCCCAAGTGGACACATGTAAT...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp TTGTATATGGACTTCTCACAAAAGTCTCTAGAGCTTCTGTGCCAAATAACAATTCGTCTGTGTTTTCTTTaGCAGTACACCAAAAGATTA +
Preference number: 5 (lower is better)
Translates to: LYMDFSQKSLELLCQITIRLCFL*QYTKRL
Trigger: TAATCTTTTGGTGTACTGCAAAAGAAAACACAGACG...AATTGTTATTTGGCACAGAAGCTCTAGAGACTTTTGTGAGAAGTCCATATACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS-3UTR CAA 90 bp CCTTGTGCATCCATAAATTACAAGTCCCCTAATGGTCCTTTTAAAGTACAAATATCTCTTCAGGTGTTTTaGCCATACAAACAAACCATT +
Preference number: 5 (lower is better)
Translates to: PCASINYKSPNGPFKVQISLQVF*PYKQTI
Trigger: AATGGTTTGTTTGTATGGCAAAAACACCTGAAGAGA...TATTTGTACTTTAAAAGGACCATTAGGGGACTTGTAATTTATGGATGCACAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CCA 72 bp TCTCGGCGCGGCTGTCTCCGCGGCTGTCCTCGCTCATaGTCGGCGGCGGTGCGCAGCGCGGCGCTGCCCGCC +
Preference number: 6 (lower is better)
Translates to: SRRGCLRGCPRS*SAAVRSAALPA
Trigger: GGCGGGCAGCGCCGCGCTGCGCACCGCCGCCGACCATGAGCGAGGACAGCCGCGGAGACAGCCGCGCCGAGA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CCA 72 bp CGCACACGCGCAGGCGAAGCTGCTTCTCCAGGTCCTTaGCGCTCTCGGCGCGGCTGTCTCCGCGGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: RTRAGEAASPGP*RSRRGCLRGCP
Trigger: AGGACAGCCGCGGAGACAGCCGCGCCGAGAGCGCCAAGGACCTGGAGAAGCAGCTTCGCCTGCGCGTGTGCG
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000529398.5
CDS CAA 72 bp ACGCACACGCGCAGGCGAAGCTGCTTCTCCAGGTCCTaGGCGCTCTCGGCGCGGCTGTCTCCGCGGCTGTCC +
Preference number: 6 (lower is better)
Translates to: THTRRRSCFSRS*ALSARLSPRLS
Trigger: GGACAGCCGCGGAGACAGCCGCGCCGAGAGCGCCAAGGACCTGGAGAAGCAGCTTCGCCTGCGCGTGTGCGT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000529398.5
CDS CAA 90 bp TCGCTGAGCACGCACACGCGCAGGCGAAGCTGCTTCTCCAGGTCCTaGGCGCTCTCGGCGCGGCTGTCTCCGCGGCTGTCCTCGCTCATG +
Preference number: 6 (lower is better)
Translates to: SLSTHTRRRSCFSRS*ALSARLSPRLSSLM
Trigger: CATGAGCGAGGACAGCCGCGGAGACAGCCGCGCCGAGAGCGCCAAGGACCTGGAGAAGCAGCTTCGCCTGCGCGTGTGCGTGCTCAGCGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000529398.5
CDS GCA 72 bp GCTGCTGCCCGGCCCCCGGCGGCGAGAATGGAAAGTTaGCGCCTCCGCCAACTCCGAGGAGAGACAGAAGAC +
Preference number: 6 (lower is better)
Translates to: AAARPPAARMES*RLRQLRGETED
Trigger: GTCTTCTGTCTCTCCTCGGAGTTGGCGGAGGCGGCAACTTTCCATTCTCGCCGCCGGGGGCCGGGCAGCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CAA 72 bp CGCTGCTGCCCGGCCCCCGGCGGCGAGAATGGAAAGTaGCCGCCTCCGCCAACTCCGAGGAGAGACAGAAGA +
Preference number: 6 (lower is better)
Translates to: RCCPAPGGENGK*PPPPTPRRDRR
Trigger: TCTTCTGTCTCTCCTCGGAGTTGGCGGAGGCGGCAACTTTCCATTCTCGCCGCCGGGGGCCGGGCAGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS TCA 72 bp TGCCCACATAGTCCCGCTCGGTCTTCTGGAGCTCGCTaGGCACGCACACGCGCAGGCGAAGCTGCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: CPHSPARSSGAR*ARTRAGEAASP
Trigger: TGGAGAAGCAGCTTCGCCTGCGCGTGTGCGTGCTCAGCGAGCTCCAGAAGACCGAGCGGGACTATGTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000529398.5
CDS GCA 72 bp CAAAGAGGCAAGCAAGGCGGGAGGGTCACATACCGATaGACACCGCTGCTGCACATGATGATGTGGCAGGCG +
Preference number: 6 (lower is better)
Translates to: QRGKQGGRVTYR*TPLLHMMMWQA
Trigger: CGCCTGCCACATCATCATGTGCAGCAGCGGTGTGCATCGGTATGTGACCCTCCCGCCTTGCTTGCCTCTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522247.5
CDS CCA 72 bp CCGCATCACATCTGTAGCCTGCATGATGTAACGAGGTaGCAGTCCGTGGCTTCTGGCCAGAATGATGGCTTG +
Preference number: 6 (lower is better)
Translates to: PHHICSLHDVTR*QSVASGQNDGL
Trigger: CAAGCCATCATTCTGGCCAGAAGCCACGGACTGCCACCTCGTTACATCATGCAGGCTACAGATGTGATGCGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000520235.1
CDS CCA 72 bp TGGCTCGCACAGCTTGTACAGCCTTGGTGCAGACTGTaGAGTCCGGTCTCTGACTCCCAAATTCTTCGCTGT +
Preference number: 6 (lower is better)
Translates to: WLAQLVQPWCRL*SPVSDSQILRC
Trigger: ACAGCGAAGAATTTGGGAGTCAGAGACCGGACTCCACAGTCTGCACCAAGGCTGTACAAGCTGTGCGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS TCA 72 bp CCTTGCTGTTGTCAAACATCTGGTTCAAGGCCGCCATaGGCTGCTCAGAGAAGGCACAGACAGTGGCCACAA +
Preference number: 6 (lower is better)
Translates to: PCCCQTSGSRPP*AAQRRHRQWPQ
Trigger: TTGTGGCCACTGTCTGTGCCTTCTCTGAGCAGCTCATGGCGGCCTTGAACCAGATGTTTGACAACAGCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 72 bp CTGTTGTCAAACATCTGGTTCAAGGCCGCCATGAGCTaGTCAGAGAAGGCACAGACAGTGGCCACAAGAGTC +
Preference number: 6 (lower is better)
Translates to: LLSNIWFKAAMS*SEKAQTVATRV
Trigger: GACTCTTGTGGCCACTGTCTGTGCCTTCTCTGAGCAGCTCATGGCGGCCTTGAACCAGATGTTTGACAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS TCA 72 bp GGAAATACGAGCTGCACTGGCTGCTGCAGATGCTGGTaGAGGAGGCGATGGAATTCCTATTGCTGTTGCAGT +
Preference number: 6 (lower is better)
Translates to: GNTSCTGCCRCW*RRRWNSYCCCS
Trigger: ACTGCAACAGCAATAGGAATTCCATCGCCTCCTTCACCAGCATCTGCAGCAGCCAGTGCAGCTCGTATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 72 bp ACAGACAGCTTTCATGGCTTGGAGGGCTTCCATCACTaGTGCATAGTCACTGTGTTTCCGTGGAGTCCGCTT +
Preference number: 6 (lower is better)
Translates to: TDSFHGLEGFHH*CIVTVFPWSPL
Trigger: AAGCGGACTCCACGGAAACACAGTGACTATGCAGCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 72 bp CGTTGGCCGCCTGTACTTCCTGCAGGCTGTAACGTGTaGAATGACACTGGCATGTGTCTCTTTGCTGACATT +
Preference number: 6 (lower is better)
Translates to: RWPPVLPAGCNV*NDTGMCLFADI
Trigger: AATGTCAGCAAAGAGACACATGCCAGTGTCATTGCACACGTTACAGCCTGCAGGAAGTACAGGCGGCCAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 72 bp GAGTCCATTTCATCACTGTGGAAATACGAGCTGCACTaGCTGCTGCAGATGCTGGTGAAGGAGGCGATGGAA +
Preference number: 6 (lower is better)
Translates to: ESISSLWKYELH*LLQMLVKEAME
Trigger: TTCCATCGCCTCCTTCACCAGCATCTGCAGCAGCCAGTGCAGCTCGTATTTCCACAGTGATGAAATGGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CCA 72 bp TCTTGCAATCCTCGGCCTGGAGTGAGATACTTGGTTTaGTCAAAGGCCCTCACAACAGCCTGCCCTTTTAGG +
Preference number: 6 (lower is better)
Translates to: SCNPRPGVRYLV*SKALTTACPFR
Trigger: CCTAAAAGGGCAGGCTGTTGTGAGGGCCTTTGACCAAACCAAGTATCTCACTCCAGGCCGAGGATTGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CCA 72 bp TGCTCAGAGAAGGCACAGACAGTGGCCACAAGAGTCTaGCAGAAAACCATGTCTCTACGGAGCTGTGTCTCA +
Preference number: 6 (lower is better)
Translates to: CSEKAQTVATRV*QKTMSLRSCVS
Trigger: TGAGACACAGCTCCGTAGAGACATGGTTTTCTGCCAGACTCTTGTGGCCACTGTCTGTGCCTTCTCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CAA 90 bp TCCAGCCACCTCCTGCTGGCTTCCCAAGTTTCCATCTCATTTTCCTaGCTGTTGTCAAACATCTGGTTCAAGGCCGCCATGAGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: SSHLLLASQVSISFS*LLSNIWFKAAMSCS
Trigger: TGAGCAGCTCATGGCGGCCTTGAACCAGATGTTTGACAACAGCAAGGAAAATGAGATGGAAACTTGGGAAGCCAGCAGGAGGTGGCTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CAA 90 bp CTGTCTCTTGGCCTCGTTTATGTTGGAACAGACAGCTTTCATGGCTaGGAGGGCTTCCATCACTGCTGCATAGTCACTGTGTTTCCGTGG +
Preference number: 6 (lower is better)
Translates to: LSLGLVYVGTDSFHG*EGFHHCCIVTVFPW
Trigger: CCACGGAAACACAGTGACTATGCAGCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGTCTGTTCCAACATAAACGAGGCCAAGAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS TCA 72 bp TGTACAGCCTTGGTGCAGACTGTGGAGTCCGGTCTCTaGCTCCCAAATTCTTCGCTGTGTTCTGAACTCTTG +
Preference number: 6 (lower is better)
Translates to: CTALVQTVESGL*LPNSSLCSELL
Trigger: CAAGAGTTCAGAACACAGCGAAGAATTTGGGAGTCAGAGACCGGACTCCACAGTCTGCACCAAGGCTGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CAA 72 bp GGCCTCGTTTATGTTGGAACAGACAGCTTTCATGGCTaGGAGGGCTTCCATCACTGCTGCATAGTCACTGTG +
Preference number: 6 (lower is better)
Translates to: GLVYVGTDSFHG*EGFHHCCIVTV
Trigger: CACAGTGACTATGCAGCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGTCTGTTCCAACATAAACGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS TCA 72 bp AGACTCCACACATTAGCATTTCAGTGCAGGTGTCAGTaGTGTTGGACCCCTCCCAGCCTTCAATGTGAGACT +
Preference number: 6 (lower is better)
Translates to: RLHTLAFQCRCQ*CWTPPSLQCET
Trigger: AGTCTCACATTGAAGGCTGGGAGGGGTCCAACATCACTGACACCTGCACTGAAATGCTAATGTGTGGAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS TCA 72 bp AATCAGACAGGGGCCCTCTCTGCTAAGAGCATTTCTTaGGAAGGAAGGTCCTCAGGAATGCAGTGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: NQTGALSAKSIS*EGRSSGMQCCL
Trigger: AAGACAGCACTGCATTCCTGAGGACCTTCCTTCTCAAGAAATGCTCTTAGCAGAGAGGGCCCCTGTCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529398.5
CDS GCA 72 bp CTCAATACAAATGCCTGTGAATACAGGATGTCCCCCTaGCCACATGCTAGGAAGGGCTGTGTACTGTGTCTA +
Preference number: 6 (lower is better)
Translates to: LNTNACEYRMSP*PHARKGCVLCL
Trigger: TAGACACAGTACACAGCCCTTCCTAGCATGTGGGCAGGGGGACATCCTGTATTCACAGGCATTTGTATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000529398.5
CDS CCA 72 bp GGCTTCCATCACTGCTGCATAGTCACTGTGTTTCCGTaGAGTCCGCTTCAGCAACTCCTTCAAAATAAGAGG +
Preference number: 6 (lower is better)
Translates to: GFHHCCIVTVFP*SPLQQLLQNKR
Trigger: CCTCTTATTTTGAAGGAGTTGCTGAAGCGGACTCCACGGAAACACAGTGACTATGCAGCAGTGATGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 72 bp TCTTGGCCTCGTTTATGTTGGAACAGACAGCTTTCATaGCTTGGAGGGCTTCCATCACTGCTGCATAGTCAC +
Preference number: 6 (lower is better)
Translates to: SWPRLCWNRQLS*LGGLPSLLHSH
Trigger: GTGACTATGCAGCAGTGATGGAAGCCCTCCAAGCCATGAAAGCTGTCTGTTCCAACATAAACGAGGCCAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 72 bp AAGGGAAGTTCATCACCTGAGTCCATTTCATCACTGTaGAAATACGAGCTGCACTGGCTGCTGCAGATGCTG +
Preference number: 6 (lower is better)
Translates to: KGSSSPESISSL*KYELHWLLQML
Trigger: CAGCATCTGCAGCAGCCAGTGCAGCTCGTATTTCCACAGTGATGAAATGGACTCAGGTGATGAACTTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CAA 72 bp AATGGAGTAATCGGGGAGAGCTGGCAGAAGATTCTCTaGCTAGGGGGACTGGCTTTCCAACTTGTAGCTCAA +
Preference number: 6 (lower is better)
Translates to: NGVIGESWQKIL*LGGLAFQLVAQ
Trigger: TTGAGCTACAAGTTGGAAAGCCAGTCCCCCTAGCAAGAGAATCTTCTGCCAGCTCTCCCCGATTACTCCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529398.5
CDS TCA 72 bp GCCAAATCCCCGGATCTGGAAGCCAAGTCCATCAGCTaGATCTGGAATTTTCACTGTCTCTCTTGGCTTTGT +
Preference number: 6 (lower is better)
Translates to: AKSPDLEAKSIS*IWNFHCLSWLC
Trigger: ACAAAGCCAAGAGAGACAGTGAAAATTCCAGATTCAGCTGATGGACTTGGCTTCCAGATCCGGGGATTTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 72 bp CACAGAGTCCAACGCCAAATATCATTGCCTCTTCTCTaGTGCGGCAATCTCCCTGTGCAATTAACCAGTCTA +
Preference number: 6 (lower is better)
Translates to: HRVQRQISLPLL*CGNLPVQLTSL
Trigger: TAGACTGGTTAATTGCACAGGGAGATTGCCGCACCAGAGAAGAGGCAATGATATTTGGCGTTGGACTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 72 bp ATGTCAAGAAGTGTTAATGGAGTAATCGGGGAGAGCTaGCAGAAGATTCTCTTGCTAGGGGGACTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: MSRSVNGVIGES*QKILLLGGLAF
Trigger: GAAAGCCAGTCCCCCTAGCAAGAGAATCTTCTGCCAGCTCTCCCCGATTACTCCATTAACACTTCTTGACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529398.5
CDS CAA 90 bp TTCCTGCAGGCTGTAACGTGTGCAATGACACTGGCATGTGTCTCTTaGCTGACATTGATTCCATTCACCTTGATAATGCACTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: FLQAVTCAMTLACVS*LTLIPFTLIMHCPG
Trigger: CCCTGGACAGTGCATTATCAAGGTGAATGGAATCAATGTCAGCAAAGAGACACATGCCAGTGTCATTGCACACGTTACAGCCTGCAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CAA 90 bp AGAAGTGTTAATGGAGTAATCGGGGAGAGCTGGCAGAAGATTCTCTaGCTAGGGGGACTGGCTTTCCAACTTGTAGCTCAATACAAATGC +
Preference number: 6 (lower is better)
Translates to: RSVNGVIGESWQKIL*LGGLAFQLVAQYKC
Trigger: GCATTTGTATTGAGCTACAAGTTGGAAAGCCAGTCCCCCTAGCAAGAGAATCTTCTGCCAGCTCTCCCCGATTACTCCATTAACACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529398.5
CDS TCA 72 bp ACGAGGCTACCAGTCGGTAAAGTTCATCCAAAGCGTTaGGAGGCCTCATTAGCTTATCTACATAGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: TRLPVGKVHPKR*EASLAYLHRQL
Trigger: AAGCTGCCTATGTAGATAAGCTAATGAGGCCTCTCAACGCTTTGGATGAACTTTACCGACTGGTAGCCTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000520235.1
ENST00000522247.5
CDS GCA 72 bp CCGGCCACGAAAAAGGTACCGATGTCCATCTGTAGATaGCTTGCTGTTCTTCAACCGTCTGTGTTTTCTTTT +
Preference number: 6 (lower is better)
Translates to: PATKKVPMSICR*LAVLQPSVFSF
Trigger: AAAAGAAAACACAGACGGTTGAAGAACAGCAAGGCATCTACAGATGGACATCGGTACCTTTTTCGTGGCCGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 72 bp AGAGTCCAACGCCAAATATCATTGCCTCTTCTCTGGTaGGGCAATCTCCCTGTGCAATTAACCAGTCTATCA +
Preference number: 6 (lower is better)
Translates to: RVQRQISLPLLW*GNLPVQLTSLS
Trigger: TGATAGACTGGTTAATTGCACAGGGAGATTGCCGCACCAGAGAAGAGGCAATGATATTTGGCGTTGGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 72 bp TATTCCAGGTGGACATTGTCCACTGTCAGACTCACATaGTCCTTCTTCCCATCAATGATGGCCATAGTGTTG +
Preference number: 6 (lower is better)
Translates to: YSRWTLSTVRLT*SFFPSMMAIVL
Trigger: CAACACTATGGCCATCATTGATGGGAAGAAGGAGCATGTGAGTCTGACAGTGGACAATGTCCACCTGGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 72 bp AGATACTTGGTTTGGTCAAAGGCCCTCACAACAGCCTaGCCTTTTAGGAGATTGGTAATTGAATCCACCTGG +
Preference number: 6 (lower is better)
Translates to: RYLVWSKALTTA*PFRRLVIESTW
Trigger: CCAGGTGGATTCAATTACCAATCTCCTAAAAGGGCAGGCTGTTGTGAGGGCCTTTGACCAAACCAAGTATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CCA 72 bp TTCCATTTCCTGTTGAAATTCTTGCAATCCTCGGCCTaGAGTGAGATACTTGGTTTGGTCAAAGGCCCTCAC +
Preference number: 6 (lower is better)
Translates to: FHFLLKFLQSSA*SEILGLVKGPH
Trigger: GTGAGGGCCTTTGACCAAACCAAGTATCTCACTCCAGGCCGAGGATTGCAAGAATTTCAACAGGAAATGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CAA 90 bp TTAGCCAGGGCTTCAAGAATCTTGGCAGTTAAGCTGAAGAAACCTTaGGGCTCAATCATCTTTTCCACCACATTGCACTTGATGCCAGCT +
Preference number: 6 (lower is better)
Translates to: LARASRILAVKLKKP*GSIIFSTTLHLMPA
Trigger: AGCTGGCATCAAGTGCAATGTGGTGGAAAAGATGATTGAGCCCAAAGGTTTCTTCAGCTTAACTGCCAAGATTCTTGAAGCCCTGGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS TCA 72 bp CTACACTTTACCTCTTCAACAAATTTCCTGATGTTCTaGGCAAGAGTCCGGACGCTGCTGGGAAGATTCCAA +
Preference number: 6 (lower is better)
Translates to: LHFTSSTNFLMF*ARVRTLLGRFQ
Trigger: TTGGAATCTTCCCAGCAGCGTCCGGACTCTTGCTCAGAACATCAGGAAATTTGTTGAAGAGGTAAAGTGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 72 bp CTAAGAGCATTTCTTGAGAAGGAAGGTCCTCAGGAATaGAGTGCTGTCTTCCATCCTGGGATATTCCTAAGA +
Preference number: 6 (lower is better)
Translates to: LRAFLEKEGPQE*SAVFHPGIFLR
Trigger: TCTTAGGAATATCCCAGGATGGAAGACAGCACTGCATTCCTGAGGACCTTCCTTCTCAAGAAATGCTCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529398.5
CDS CCA 72 bp ATGGCAGTTGGTAGGGCAGAAATCACTGCTGTGCAGTaGGGAGATTTTAGATTTGGCCTGTTTAAAAGTAGG +
Preference number: 6 (lower is better)
Translates to: MAVGRAEITAVQ*GDFRFGLFKSR
Trigger: CCTACTTTTAAACAGGCCAAATCTAAAATCTCCCCACTGCACAGCAGTGATTTCTGCCCTACCAACTGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000517617.1
CDS CAA 72 bp AAGAAACCTTTGGGCTCAATCATCTTTTCCACCACATaGCACTTGATGCCAGCTGTGCTGTCGTACTCATAC +
Preference number: 6 (lower is better)
Translates to: KKPLGSIIFSTT*HLMPAVLSYSY
Trigger: GTATGAGTACGACAGCACAGCTGGCATCAAGTGCAATGTGGTGGAAAAGATGATTGAGCCCAAAGGTTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS TCA 72 bp CTCAGGCCTGTGAATCTCTCCAATTTCCAACAGCCATaGCACAAATTCGCTTCCAAGAAAGCATTTAGGGAA +
Preference number: 6 (lower is better)
Translates to: LRPVNLSNFQQP*HKFASKKAFRE
Trigger: TTCCCTAAATGCTTTCTTGGAAGCGAATTTGTGTCATGGCTGTTGGAAATTGGAGAGATTCACAGGCCTGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CAA 72 bp GCTGTAACGTGTGCAATGACACTGGCATGTGTCTCTTaGCTGACATTGATTCCATTCACCTTGATAATGCAC +
Preference number: 6 (lower is better)
Translates to: AVTCAMTLACVS*LTLIPFTLIMH
Trigger: GTGCATTATCAAGGTGAATGGAATCAATGTCAGCAAAGAGACACATGCCAGTGTCATTGCACACGTTACAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CCA 72 bp GCCTCATTAGCTTATCTACATAGGCAGCTTTGGATGTaGAGTTTGGTGGTGAATTTGACTTGTCCAAGTAGA +
Preference number: 6 (lower is better)
Translates to: ASLAYLHRQLWM*SLVVNLTCPSR
Trigger: TCTACTTGGACAAGTCAAATTCACCACCAAACTCCACATCCAAAGCTGCCTATGTAGATAAGCTAATGAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000520235.1
ENST00000522247.5
CDS CAA 72 bp GTCTTCTTGAGCACTCTCAATGCTATTATAAACCCATaGTATGGAATCTTGCTTCGTTGGCCGCCTGTACTT +
Preference number: 6 (lower is better)
Translates to: VFLSTLNAIINP*YGILLRWPPVL
Trigger: AAGTACAGGCGGCCAACGAAGCAAGATTCCATACAATGGGTTTATAATAGCATTGAGAGTGCTCAAGAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CAA 72 bp GAAGTAAACTTTCAGAGCTTGCCGACTTCCTTCTGCTaGATATGTAAGAGGAACATTTGCAACCAGAGGTTC +
Preference number: 6 (lower is better)
Translates to: EVNFQSLPTSFC*ICKRNICNQRF
Trigger: GAACCTCTGGTTGCAAATGTTCCTCTTACATATCAAGCAGAAGGAAGTCGGCAAGCTCTGAAAGTTTACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS CAA 90 bp TGCTTCATCTCCAGGGGGCTTGGAGTGAGATTTTTGAAGGTCTTCTaGAGCACTCTCAATGCTATTATAAACCCATTGTATGGAATCTTG +
Preference number: 6 (lower is better)
Translates to: CFISRGLGVRFLKVF*STLNAIINPLYGIL
Trigger: CAAGATTCCATACAATGGGTTTATAATAGCATTGAGAGTGCTCAAGAAGACCTTCAAAAATCTCACTCCAAGCCCCCTGGAGATGAAGCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CAA 72 bp TCCAGGGGGCTTGGAGTGAGATTTTTGAAGGTCTTCTaGAGCACTCTCAATGCTATTATAAACCCATTGTAT +
Preference number: 6 (lower is better)
Translates to: SRGLGVRFLKVF*STLNAIINPLY
Trigger: ATACAATGGGTTTATAATAGCATTGAGAGTGCTCAAGAAGACCTTCAAAAATCTCACTCCAAGCCCCCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS TCA 72 bp TGCTCAAGGCAACTATGTATCTTGTCCTGTTTATCATaGGATATGCGAACACTTAAGGGAAGTTCATCACCT +
Preference number: 6 (lower is better)
Translates to: CSRQLCILSCLS*DMRTLKGSSSP
Trigger: AGGTGATGAACTTCCCTTAAGTGTTCGCATATCTCATGATAAACAGGACAAGATACATAGTTGCCTTGAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS GCA 72 bp TTGGCTTTGTGCTCACAAGAACTCTTAGAGGTTTTCTaGTGTTTAAACACGATTTCAGGAAGCAATCCACTT +
Preference number: 6 (lower is better)
Translates to: LALCSQELLEVF*CLNTISGSNPL
Trigger: AAGTGGATTGCTTCCTGAAATCGTGTTTAAACAGCAGAAAACCTCTAAGAGTTCTTGTGAGCACAAAGCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 72 bp CTGAATCTGGAATTTTCACTGTCTCTCTTGGCTTTGTaGTCACAAGAACTCTTAGAGGTTTTCTGCTGTTTA +
Preference number: 6 (lower is better)
Translates to: LNLEFSLSLLAL*SQELLEVFCCL
Trigger: TAAACAGCAGAAAACCTCTAAGAGTTCTTGTGAGCACAAAGCCAAGAGAGACAGTGAAAATTCCAGATTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CAA 72 bp ACATGCTCCTTCTTCCCATCAATGATGGCCATAGTGTaGAATTTGTCAATAACCTCTTCTACTTTACAGTCA +
Preference number: 6 (lower is better)
Translates to: TCSFFPSMMAIV*NLSITSSTLQS
Trigger: TGACTGTAAAGTAGAAGAGGTTATTGACAAATTCAACACTATGGCCATCATTGATGGGAAGAAGGAGCATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 72 bp AGTGAGATTTTTGAAGGTCTTCTTGAGCACTCTCAATaGTATTATAAACCCATTGTATGGAATCTTGCTTCG +
Preference number: 6 (lower is better)
Translates to: SEIFEGLLEHSQ*YYKPIVWNLAS
Trigger: CGAAGCAAGATTCCATACAATGGGTTTATAATAGCATTGAGAGTGCTCAAGAAGACCTTCAAAAATCTCACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS CAA 72 bp TCTTCACTGTTTCTTCTGTCACATTTTTGTCAACTTTaGATGCTGCACACTGGTTCATTCTGTGTAAGAATG +
Preference number: 6 (lower is better)
Translates to: SSLFLLSHFCQL*MLHTGSFCVRM
Trigger: CATTCTTACACAGAATGAACCAGTGTGCAGCATCAAAAGTTGACAAAAATGTGACAGAAGAAACAGTGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000288368.5
ENST00000529398.5
CDS CAA 72 bp ATGATAACTATCAATGTAGAAGTAAACTTTCAGAGCTaGCCGACTTCCTTCTGCTTGATATGTAAGAGGAAC +
Preference number: 6 (lower is better)
Translates to: MITINVEVNFQS*PTSFCLICKRN
Trigger: GTTCCTCTTACATATCAAGCAGAAGGAAGTCGGCAAGCTCTGAAAGTTTACTTCTACATTGATAGTTATCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000288368.5
CDS TCA 72 bp TCATTTTATAAAGTTTCTCACCCTGTTCAGAGATCATaGCCCAGGTATCTTGCTCCATTCCTAATTTTAAAC +
Preference number: 6 (lower is better)
Translates to: SFYKVSHPVQRS*PRYLAPFLILN
Trigger: GTTTAAAATTAGGAATGGAGCAAGATACCTGGGTCATGATCTCTGAACAGGGTGAGAAACTTTATAAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000288368.5
ENST00000517617.1
ENST00000529398.5
CDS GCA 72 bp AGCCTTTTATTAATCAAATCAGCTGGTTACATAAAGTaGTGCCCAAGGTTGTTACAATCATTAGCAAAACAT +
Preference number: 6 (lower is better)
Translates to: SLLLIKSAGYIK*CPRLLQSLAKH
Trigger: ATGTTTTGCTAATGATTGTAACAACCTTGGGCAGCACTTTATGTAACCAGCTGATTTGATTAATAAAAGGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520235.1