RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PREX1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124126

Ensembl transcript IDs: ENST00000371941.4, ENST00000482556.5, ENST00000496915.1, ENST00000620554.1

Found 772 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTaGGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGCGCTGCCTGC +
Preference number: 1 (lower is better)
Translates to: GRRQGGRWAGPGTGG*GSLGPSLEKASAAC
Trigger: GCAGGCAGCGCTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCTTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 90 bp GGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGCGCTaGCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCC +
Preference number: 1 (lower is better)
Translates to: GRLRKPWAIPGEGQR*LLCPPKSQLQRPRP
Trigger: GGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGCGCTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 90 bp AGAGAGGGAAGCGCACCCTGGAGGGCGGGAGGCTCGGATGCCAGATaGCGGGAGGGCTTCAAGCTCCCAGGCCTGGGGGCAGCAGGGAGC +
Preference number: 1 (lower is better)
Translates to: REGSAPWRAGGSDAR*REGFKLPGLGAAGS
Trigger: GCTCCCTGCTGCCCCCAGGCCTGGGAGCTTGAAGCCCTCCCGGCATCTGGCATCCGAGCCTCCCGCCCTCCAGGGTGCGCTTCCCTCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 90 bp GGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGCGCTGCCTaGTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCG +
Preference number: 1 (lower is better)
Translates to: GCGSLGPSLEKASAA*CVLPNPSSRGRGPA
Trigger: CGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGCGCTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 90 bp GGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTaGAGAAGGCCAGCGCTGCCTGCTGTGTCCTCCCAAATCCCAGCT +
Preference number: 1 (lower is better)
Translates to: GQVPERAAAEALGHP*RRPALPAVSSQIPA
Trigger: AGCTGGGATTTGGGAGGACACAGCAGGCAGCGCTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 90 bp TGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTaGGGCATTTGGGTGTTCAGAGGTCCCCATCCACCGGCGGCTGGC +
Preference number: 1 (lower is better)
Translates to: CCVLPNPSSRGRGPA*GIWVFRGPHPPAAG
Trigger: GCCAGCCGCCGGTGGATGGGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR CCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATaGGCCGGCCCAGGGCCAATCAGCCAGCTCGTCATCACAGCGAGG +
Preference number: 1 (lower is better)
Translates to: MGLQHPSSFWQACEE*AGPGPISQLVITAR
Trigger: CCTCGCTGTGATGACGAGCTGGCTGATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 90 bp GCTGCTCCCATCAGCTCTATGGGTCTCCAGCACCCCTCCAGCTTCTaGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCAGCCAG +
Preference number: 1 (lower is better)
Translates to: AAPISSMGLQHPSSF*QACEEWAGPGPISQ
Trigger: CTGGCTGATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCATAGAGCTGATGGGAGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 90 bp GATGGGGATGAGGCCGGCGCCCACACTCCCAGCAGCACCAGGCTTTaGGTGGACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGC +
Preference number: 1 (lower is better)
Translates to: DGDEAGAHTPSSTRL*VDKGLHEAAELIQG
Trigger: GCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGTCCACCCAAAGCCTGGTGCTGCTGGGAGTGTGGGCGCCGGCCTCATCCCCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR TCA 90 bp CAGCTCTATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTaGAGAATGGGCCGGCCCAGGGCCAATCAGCCAGCTCGTCATCAC +
Preference number: 1 (lower is better)
Translates to: QLYGSPAPLQLLAGV*RMGRPRANQPARHH
Trigger: GTGATGACGAGCTGGCTGATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCATAGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 90 bp GATGCAAGATACAGTGACAAGGCCACTGCCTGCCCTCGTGTATGCTaGGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGGAGGCTCGGA +
Preference number: 1 (lower is better)
Translates to: DARYSDKATACPRVC*GKRGKRTLEGGRLG
Trigger: TCCGAGCCTCCCGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGTGGCCTTGTCACTGTATCTTGCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 90 bp GGGATGAGGCCGGCGCCCACACTCCCAGCAGCACCAGGCTTTGGGTaGACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTG +
Preference number: 1 (lower is better)
Translates to: GMRPAPTLPAAPGFG*TKDFMRRQSSSRAL
Trigger: CAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGTCCACCCAAAGCCTGGTGCTGCTGGGAGTGTGGGCGCCGGCCTCATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR GCA 90 bp TCTGATGCAAGATACAGTGACAAGGCCACTGCCTGCCCTCGTGTATaGTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGGAGGCTC +
Preference number: 1 (lower is better)
Translates to: SDARYSDKATACPRV*CGKRGKRTLEGGRL
Trigger: GAGCCTCCCGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGTGGCCTTGTCACTGTATCTTGCATCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 90 bp AGAATCTCCACCCTTGGGCCCTGCTTCCGCATGATGTCCGTGGCCTaGATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATG +
Preference number: 1 (lower is better)
Translates to: RISTLGPCFRMMSVA*MMHLGSNPWLRAKM
Trigger: CATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCATGCAGGCCACGGACATCATGCGGAAGCAGGGCCCAAGGGTGGAGATTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR CCA 90 bp GTGTGGGTCCCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTaGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCATCA +
Preference number: 1 (lower is better)
Translates to: VWVPPPQQAGWLPVL*LVMSQSPCSEKLPS
Trigger: TGATGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGGGACCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR TCA 90 bp TCCCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTaGTGTCCCAATCGCCCTGCTCTGAGAAGTTACCATCAAGAAAAT +
Preference number: 1 (lower is better)
Translates to: SLLPSRQGGFLCSGW*CPNRPALRSYHQEN
Trigger: ATTTTCTTGATGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR TCA 90 bp CATCAAGAAAATAAATCACAGAAGCCACCGCCCGGTGTTTCCCAGTaGCCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCAT +
Preference number: 1 (lower is better)
Translates to: HQENKSQKPPPGVSQ*PSNPCDTAPQVGLH
Trigger: ATGGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACACCGGGCGGTGGCTTCTGTGATTTATTTTCTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 90 bp GAAGCTAAGATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTaGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCA +
Preference number: 1 (lower is better)
Translates to: EAKMRRRRHVWSPGM*TLKETGVSKVQAEP
Trigger: TGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATCTTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 90 bp AAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTaGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAA +
Preference number: 1 (lower is better)
Translates to: KRASSNTGQPLENGG*GKESQSIPQNDTLQ
Trigger: TTGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 90 bp CTTAACTTGAATGCTAACCACCCAGATGTTCGCTTCATGCATCTATaGTCTGGGCACTTTTCTGTAGGTAGATTACATCTCATGATAAAA +
Preference number: 1 (lower is better)
Translates to: LNLNANHPDVRFMHL*SGHFSVGRLHLMIK
Trigger: TTTTATCATGAGATGTAATCTACCTACAGAAAAGTGCCCAGAGCATAGATGCATGAAGCGAACATCTGGGTGGTTAGCATTCAAGTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000620554.1
3UTR-3UTR TCA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGTGCCTGTGCCACACATaGCCATCTGGCAGGCCCCCA +
Preference number: 2 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLECLCHT*PSGRPP
Trigger: TGGGGGCCTGCCAGATGGTCATGTGTGGCACAGGCA...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR GCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTCCCGGAACGGGCGGCTaGGGAAGCCTTGGGCCATCC +
Preference number: 2 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLPGTGG*GSLGPS
Trigger: GGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGG...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTGAGGGAAGCGCACCCTaGAGGGCGGGAGGCTCGGAT +
Preference number: 2 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLEGSAP*RAGGSD
Trigger: ATCCGAGCCTCCCGCCCTCCAGGGTGCGCTTCCCTC...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGCGGGAGGCTCGGATaGCAGATGCCGGGAGGGCTT +
Preference number: 2 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGGGRLG*QMPGGL
Trigger: AAGCCCTCCCGGCATCTGGCATCCGAGCCTCCCGCC...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp CAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCCAGCCTTGGGCCATCCCTaGAGAAGGCCAGCGCTGCCT +
Preference number: 2 (lower is better)
Translates to: QLQRPRPSVGHLGVQRSPALGHP*RRPALP
Trigger: AGGCAGCGCTGGCCTTCTCCAGGGATGGCCCAAGGC...TGGGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGCAGGCGTGTGAAGAATaGGCCGGCCCAGGGCCAATC +
Preference number: 2 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQQACEE*AGPGPI
Trigger: GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTG...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGCGTTCCCTTGGGTTCTaGGGACGCAGGAGCCGAAGG +
Preference number: 2 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQRSLGF*GRRSRR
Trigger: CCTTCGGCTCCTGCGTCCCCAGAACCCAAGGGAACG...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGAGGCGCGGAGCACCCTaGGGCATCTGGTCCTTGACT +
Preference number: 2 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQRRGAP*GIWSLT
Trigger: AGTCAAGGACCAGATGCCCCAGGGTGCTCCGCGCCT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR CCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTGGCCGCGGCCCAGCGTaGGGCATTTGGGTGTTCAGA +
Preference number: 2 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLGRGPA*GIWVFR
Trigger: TCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCC...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR TCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGGCTCATCCAGGGCATTaGTGGGGCGGATCAGCTGGT +
Preference number: 2 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQAHPGH*WGGSAG
Trigger: ACCAGCTGATCCGCCCCATCAATGCCCTGGATGAGC...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR TCA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGCTGGAATGTGGACGTTaGAGGAAACCGGGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLELECGR*RKPGFQ
Trigger: TTGAAACCCCGGTTTCCTTCAACGTCCACATTCCAG...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR TCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAACAGTTCCAGGGGCGGTaGTGTCCAGAGCTGGTGTGG +
Preference number: 2 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQQFQGR*CPELVW
Trigger: CCACACCAGCTCTGGACATCACCGCCCCTGGAACTG...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR TCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGGGGGCATCTGGTCCTTaGCTCGCAGGTTTTTGGCCA +
Preference number: 2 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGGASGP*LAGFWP
Trigger: TGGCCAAAAACCTGCGAGTCAAGGACCAGATGCCCC...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR GCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGCCTGCCCTCGTGTATaGTGCGGCAAGAGAGGGAAG +
Preference number: 2 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGACPRV*CGKRGK
Trigger: CTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGC...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGAGGCAGGGAGGACGCTaGGCAGGTCCCGGAACGGGC +
Preference number: 2 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRRQGGR*AGPGTG
Trigger: GCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCT...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCTCATCACAGCGAGGGTaGCCAGGCTTGTCCCGGAAG +
Preference number: 2 (lower is better)
Translates to: HPSSFWQACEEWAGPGPISSQRG*PGLSRK
Trigger: CTTCCGGGACAAGCCTGGCCACCCTCGCTGTGATGA...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGCACCCCTCCAGCTTCTaGCAGGCGTGTGAAGAATGG +
Preference number: 2 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGHPSSF*QACEEW
Trigger: CCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAATCAGAGCAAATCTCGTaGCCAGGGCTGGTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQSEQIS*PGLVAP
Trigger: TGGGGCCACCAGCCCTGGGCACGAGATTTGCTCTGA...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCCAGGCGTGTGAAGAATaGGCCGGCCCAGGGCCAATC +
Preference number: 2 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFQACEE*AGPGPI
Trigger: GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTG...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGTCTCGTGCCCAGGGCTaGTGGCCCCAGTTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRSRAQG*WPQFQG
Trigger: CCCCTGGAACTGGGGCCACCAGCCCTGGGCACGAGA...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGCAGAATCTCCACCCTTaGGCCCTGCTTCCGCATGAT +
Preference number: 2 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGQNLHP*ALLPHD
Trigger: ATCATGCGGAAGCAGGGCCCAAGGGTGGAGATTCTG...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGGCCTTGGGCCATCCCTaGAGAAGGCCAGCGCTGCCT +
Preference number: 2 (lower is better)
Translates to: SKRASSNTGQPLENGGWGALGHP*RRPALP
Trigger: AGGCAGCGCTGGCCTTCTCCAGGGATGGCCCAAGGC...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGCGGCTGCGGAAGCCTTaGGCCATCCCTGGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRRLRKP*AIPGEG
Trigger: GCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCG...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGCTCCAGCTCCAACCCTaGCTGGCCACCTCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: SKRASSNTGQPLENGGWGLQLQP*LATSQA
Trigger: GGCCTGAGAGGTGGCCAGCCAGGGTTGGAGCTGGAG...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CAA 90 bp GGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTaGTCTCTGATGCAAGATACAGTGACAAGGCCACTGCCTGCCCTC +
Preference number: 2 (lower is better)
Translates to: GPSPISRSRAKAGPP*SLMQDTVTRPLPAL
Trigger: GAGGGCAGGCAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR TCA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCGGACAAAGGACTTCATaGGGCGGCAGAGCTCATCCA +
Preference number: 2 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSGQRTS*GGRAHP
Trigger: TGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGTCC...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR TCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCCGAGGAGATGGGGATaGGGCCGGCGCCCACACTCC +
Preference number: 2 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNPRRWG*GRRPHS
Trigger: GGAGTGTGGGCGCCGGCCTCATCCCCATCTCCTCGG...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR GCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGAGGCCAGGCACCAGCTaGTCCCATCAGCTCTATGGG +
Preference number: 2 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPRPGTS*SHQLYG
Trigger: CCCATAGAGCTGATGGGAGCAGCTGGTGCCTGGCCT...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCTCCATGACGTTCCCTTaGGTTCTGGGGACGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFSMTFP*VLGTQE
Trigger: CTCCTGCGTCCCCAGAACCCAAGGGAACGTCATGGA...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCCCAGCGTGGGGCATTTaGGTGTTCAGAGGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSPAWGI*VFRGPH
Trigger: ATGGGGACCTCTGAACACCCAAATGCCCCACGCTGG...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR TCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTCTTCTGGCAGGCGTGTaGAGAATGGGCCGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: VTQRERVLTPANRWRMEGLLAGV*RMGRPR
Trigger: CCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAG...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR TCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCTGTGCTCTGGCTGGTaGTGTCCCAATCGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFLCSGW*CPNRPA
Trigger: AGCAGGGCGATTGGGACATCACCAGCCAGAGCACAG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGCCAAGATGGCCGCCTaGTCCAGGGACACGCTCAGG +
Preference number: 2 (lower is better)
Translates to: VTQRERVLTPANRWRMEGAKMAA*SRDTLR
Trigger: CCTGAGCGTGTCCCTGGAGCAGGCGGCCATCTTGGC...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR CCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCACGGCTGCGGAAGCCTTaGGCCATCCCTGGAGAAGGC +
Preference number: 2 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPRLRKP*AIPGEG
Trigger: GCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCG...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGGGAGAAGGCCAGCGCTaGCTGCTGTGTCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: QALVASHSKRASSNTGQPGEGQR*LLCPPK
Trigger: TTTGGGAGGACACAGCAGGCAGCGCTGGCCTTCTCC...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGCTCAGGGTGCTCCTCTaGATGCCTGTGCCACACATG +
Preference number: 2 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRLRVLL*MPVPHM
Trigger: CATGTGTGGCACAGGCATGCAGAGGAGCACCCTGAG...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR CCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGTTGGGCAGCAACCCGTaGCTCCGTGCCAAGATGGCC +
Preference number: 2 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVLGSNP*LRAKMA
Trigger: GGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAA...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR GCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGAAGGCCAGCGCTGCCTaGTGTGTCCTCCCAAATCCC +
Preference number: 2 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVKASAA*CVLPNP
Trigger: GGGATTTGGGAGGACACAGCAGGCAGCGCTGGCCTT...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAGGAGAAGGCCAGCGCTaGCTGCTGTGTCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPGEGQR*LLCPPK
Trigger: TTTGGGAGGACACAGCAGGCAGCGCTGGCCTTCTCC...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTAGGCCAGGCACCAGCTaGTCCCATCAGCTCTATGGG +
Preference number: 2 (lower is better)
Translates to: VTQRERVLTPANRWRMEGRPGTS*SHQLYG
Trigger: CCCATAGAGCTGATGGGAGCAGCTGGTGCCTGGCCT...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTCCGGGGTTTCAAAAGTaGAGGCGGAGCCATCCCGAG +
Preference number: 2 (lower is better)
Translates to: VTQRERVLTPANRWRMEGPGFQK*RRSHPE
Trigger: CTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGG...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGTGCCCTCGTGTATGCTaGGGCAAGAGAGGGAAGCGC +
Preference number: 2 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVCPRVC*GKRGKR
Trigger: GCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCA...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGGACAAGGCCACTGCCTaGCCTCGTGTATGCTGCGGC +
Preference number: 2 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLDKATA*PRVCCG
Trigger: GCCGCAGCATACACGAGGGCAGGCAGTGGCCTTGTC...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATCGTGCCCAGGGCTGGTaGCCCCAGTTCCAGGGGCGG +
Preference number: 2 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHRAQGW*PQFQGR
Trigger: CCGCCCCTGGAACTGGGGCCACCAGCCCTGGGCACG...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CAA 90 bp AAGATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTaGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGA +
Preference number: 2 (lower is better)
Translates to: KMRRRRHVWSPGMWT*KETGVSKVQAEPSR
Trigger: TCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGACACGTGTGGTCACCTaGAATGTGGACGTTGAAGGA +
Preference number: 2 (lower is better)
Translates to: SKRASSNTGQPLENGGWGTRVVT*NVDVEG
Trigger: TCCTTCAACGTCCACATTCCAGGTGACCACACGTGT...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGAGGAGGAGACACGTGTaGTCACCTGGAATGTGGACG +
Preference number: 2 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVRRRHV*SPGMWT
Trigger: CGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR TCA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCCTTCTGGCAGGCGTGTaGAGAATGGGCCGGCCCAGG +
Preference number: 2 (lower is better)
Translates to: ISCHINKVRANLVPRAGGLLAGV*RMGRPR
Trigger: CCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAG...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGATGTCCCAATCGCCCTaGTCTGAGAAGTTACCATCA +
Preference number: 2 (lower is better)
Translates to: SKRASSNTGQPLENGGWGMSQSP*SEKLPS
Trigger: TGATGGTAACTTCTCAGAGCAGGGCGATTGGGACAT...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTCGTGCCCAGGGCTGGTaGCCCCAGTTCCAGGGGCGG +
Preference number: 2 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLRAQGW*PQFQGR
Trigger: CCGCCCCTGGAACTGGGGCCACCAGCCCTGGGCACG...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACGCACCAGGCTTTGGGTaGACAAAGGACTTCATGAGG +
Preference number: 2 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNAPGFG*TKDFMR
Trigger: CCTCATGAAGTCCTTTGTCCACCCAAAGCCTGGTGC...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAAGGAGGAGACACGTGTaGTCACCTGGAATGTGGACG +
Preference number: 2 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTRRRHV*SPGMWT
Trigger: CGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATAGCTCCAACCCTGGCTaGCCACCTCTCAGGCCCTTG +
Preference number: 2 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHSSNPG*PPLRPL
Trigger: CAAGGGCCTGAGAGGTGGCCAGCCAGGGTTGGAGCT...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACAGCAGCACCAGGCTTTaGGTGGACAAAGGACTTCAT +
Preference number: 2 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNSSTRL*VDKGLH
Trigger: ATGAAGTCCTTTGTCCACCCAAAGCCTGGTGCTGCT...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR TCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATCCCGGTGTTTCCCAGTaGCCCTCTAACCCGTGTGAC +
Preference number: 2 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHPGVSQ*PSNPCD
Trigger: GTCACACGGGTTAGAGGGTCACTGGGAAACACCGGG...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR GCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATAAGGCCAGCGCTGCCTaGTGTGTCCTCCCAAATCCC +
Preference number: 2 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHKASAA*CVLPNP
Trigger: GGGATTTGGGAGGACACAGCAGGCAGCGCTGGCCTT...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR TCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACCTGGAATGTGGACGTTaGAGGAAACCGGGGTTTCAA +
Preference number: 2 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYLECGR*RKPGFQ
Trigger: TTGAAACCCCGGTTTCCTTCAACGTCCACATTCCAG...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGAATACTACCTTCTGTTaGTCCCCTGTTAGACAACAT +
Preference number: 2 (lower is better)
Translates to: QALVASHSKRASSNTGQPNTTFC*SPVRQH
Trigger: ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATT...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATGCACCCTGGGGCATCTaGTCCTTGACTCGCAGGTTT +
Preference number: 2 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHAPWGI*SLTRRF
Trigger: AAACCTGCGAGTCAAGGACCAGATGCCCCAGGGTGC...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR TCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACCAATCGCCCTGCTCTaGGAAGTTACCATCAAGAAA +
Preference number: 2 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTPIALL*EVTIKK
Trigger: TTTCTTGATGGTAACTTCTCAGAGCAGGGCGATTGG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CCA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAACTCCAGCTCCAACCCTaGCTGGCCACCTCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQLQLQP*LATSQA
Trigger: GGCCTGAGAGGTGGCCAGCCAGGGTTGGAGCTGGAG...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR TCA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAACTGTGCTCTGGCTGGTaGTGTCCCAATCGCCCTGCT +
Preference number: 2 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQLCSGW*CPNRPA
Trigger: AGCAGGGCGATTGGGACATCACCAGCCAGAGCACAG...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 72 bp CAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTaGGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGC +
Preference number: 3 (lower is better)
Translates to: QGGRWAGPGTGG*GSLGPSLEKAS
Trigger: GCTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 72 bp CCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTaGGTGTTCAGAGGTCCCCATCCACCGGCGGCTGGC +
Preference number: 3 (lower is better)
Translates to: PSSRGRGPAWGI*VFRGPHPPAAG
Trigger: GCCAGCCGCCGGTGGATGGGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR TCA 72 bp CCCCCAGGCGGTAGCAGAGCTCCGAGGAGATGGGGATaGGGCCGGCGCCCACACTCCCAGCAGCACCAGGCT +
Preference number: 3 (lower is better)
Translates to: PPGGSRAPRRWG*GRRPHSQQHQA
Trigger: AGCCTGGTGCTGCTGGGAGTGTGGGCGCCGGCCTCATCCCCATCTCCTCGGAGCTCTGCTACCGCCTGGGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR-3UTR CAA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGCGAGGGTGGCCAGGCTaGTCCCGGAAGGAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: LPALVYAAAREGSAPWRARGWPG*SRKEAG
Trigger: CCCTGCCTCCTTCCGGGACAAGCCTGGCCACCCTCG...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CAA 90 bp CCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCAGCTCATCCAGGGCATaGATGGGGCGGATCAGCTGG +
Preference number: 3 (lower is better)
Translates to: PSSRGRGPAWGIWVFRGPSSSRA*MGRISW
Trigger: CCAGCTGATCCGCCCCATCAATGCCCTGGATGAGCT...GGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR TCA 72 bp GGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTaGAGAATGGGCCGGCCCAGGGCCAATCAGCCAGCT +
Preference number: 3 (lower is better)
Translates to: GSPAPLQLLAGV*RMGRPRANQPA
Trigger: AGCTGGCTGATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 72 bp TCCGTGGCCTGCATGATGCACTTGGGCAGCAACCCGTaGCTCCGTGCCAAGATGGCCGCCTGCTCCAGGGAC +
Preference number: 3 (lower is better)
Translates to: SVACMMHLGSNP*LRAKMAACSRD
Trigger: GTCCCTGGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCATGCAGGCCACGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR CCA 72 bp CTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTaGGGCATTTGGGTGTTCAGAGGTCCCCATCCACCG +
Preference number: 3 (lower is better)
Translates to: LPNPSSRGRGPA*GIWVFRGPHPP
Trigger: CGGTGGATGGGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR GCA 72 bp TACAGTGACAAGGCCACTGCCTGCCCTCGTGTATGCTaGGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGG +
Preference number: 3 (lower is better)
Translates to: YSDKATACPRVC*GKRGKRTLEGG
Trigger: CCCGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGTGGCCTTGTCACTGTA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 72 bp CTGCATGATGCACTTGGGCAGCAACCCGTGGCTCCGTaGCAAGATGGCCGCCTGCTCCAGGGACACGCTCAG +
Preference number: 3 (lower is better)
Translates to: LHDALGQQPVAP*QDGRLLQGHAQ
Trigger: CTGAGCGTGTCCCTGGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCATGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR CCA 72 bp CAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGGGTaGCCCCATGTGGCCTCCATGACGTTCCCTTGGGTT +
Preference number: 3 (lower is better)
Translates to: QKCRRSHPEGAG*PHVASMTFPWV
Trigger: AACCCAAGGGAACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 72 bp AGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTaGGGCTCCATCCCCTCCAGCTCCAACCCTGGCTGG +
Preference number: 3 (lower is better)
Translates to: SDPLTRVTRHLR*GSIPSSSNPGW
Trigger: CCAGCCAGGGTTGGAGCTGGAGGGGATGGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR GCA 72 bp ACCCTTGGGCCCTGCTTCCGCATGATGTCCGTGGCCTaGATGATGCACTTGGGCAGCAACCCGTGGCTCCGT +
Preference number: 3 (lower is better)
Translates to: TLGPCFRMMSVA*MMHLGSNPWLR
Trigger: ACGGAGCCACGGGTTGCTGCCCAAGTGCATCATGCAGGCCACGGACATCATGCGGAAGCAGGGCCCAAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR CCA 72 bp ATCAGCTCTATGGGTCTCCAGCACCCCTCCAGCTTCTaGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: ISSMGLQHPSSF*QACEEWAGPGP
Trigger: TGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCATAGAGCTGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 72 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTaGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: PPPQQAGWLPVL*LVMSQSPCSEK
Trigger: CTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 72 bp CCGGCGCCCACACTCCCAGCAGCACCAGGCTTTGGGTaGACAAAGGACTTCATGAGGCGGCAGAGCTCATCC +
Preference number: 3 (lower is better)
Translates to: PAPTLPAAPGFG*TKDFMRRQSSS
Trigger: GGATGAGCTCTGCCGCCTCATGAAGTCCTTTGTCCACCCAAAGCCTGGTGCTGCTGGGAGTGTGGGCGCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR GCA 72 bp AGATACAGTGACAAGGCCACTGCCTGCCCTCGTGTATaGTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: RYSDKATACPRV*CGKRGKRTLEG
Trigger: GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGTGGCCTTGTCACTGTATCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 72 bp CCCAGCTGTGACCTTTCCCTGAAGGCATACCGAAGCTaGGGGGACAAACTGCCGAGGGGGCTTGTGTGGGTC +
Preference number: 3 (lower is better)
Translates to: PSCDLSLKAYRS*GDKLPRGLVWV
Trigger: GACCCACACAAGCCCCCTCGGCAGTTTGTCCCCCCAGCTTCGGTATGCCTTCAGGGAAAGGTCACAGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR TCA 72 bp GGTAGAGGCGCGGAGCACCCTGGGGCATCTGGTCCTTaGCTCGCAGGTTTTTGGCCAGAATCTCCACCCTTG +
Preference number: 3 (lower is better)
Translates to: GRGAEHPGASGP*LAGFWPESPPL
Trigger: CAAGGGTGGAGATTCTGGCCAAAAACCTGCGAGTCAAGGACCAGATGCCCCAGGGTGCTCCGCGCCTCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR TCA 72 bp CCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTaGTGTCCCAATCGCCCTGCTCTGAGAAGTTACCAT +
Preference number: 3 (lower is better)
Translates to: PSRQGGFLCSGW*CPNRPALRSYH
Trigger: ATGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR TCA 72 bp AATAAATCACAGAAGCCACCGCCCGGTGTTTCCCAGTaGCCCTCTAACCCGTGTGACACGGCACCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: NKSQKPPPGVSQ*PSNPCDTAPQV
Trigger: CACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACACCGGGCGGTGGCTTCTGTGATTTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CCA 72 bp TCTGTACATTTTAAAGTAAACCAGTGCACAATGCGCTaGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: SVHFKVNQCTMR*PWALPHFPQQG
Trigger: GCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAGCGCATTGTGCACTGGTTTACTTTAAAATGTACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CAA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCCTGGAATGTGGACGTaGAAGGAAACCGGGGTTTCA +
Preference number: 3 (lower is better)
Translates to: QALVASHSKRASSNTGQPPGMWT*KETGVS
Trigger: TGAAACCCCGGTTTCCTTCAACGTCCACATTCCAGG...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CAA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACTCCATGACGTTCCCTaGGGTTCTGGGGACGCAGGA +
Preference number: 3 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTLHDVP*GSGDAG
Trigger: TCCTGCGTCCCCAGAACCCAAGGGAACGTCATGGAG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CAA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGCCTGGAATGTGGACGTaGAAGGAAACCGGGGTTTCA +
Preference number: 3 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVPGMWT*KETGVS
Trigger: TGAAACCCCGGTTTCCTTCAACGTCCACATTCCAGG...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CAA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACTGGGGCATCTGGTCCTaGACTCGCAGGTTTTTGGCC +
Preference number: 3 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYWGIWS*TRRFLA
Trigger: GGCCAAAAACCTGCGAGTCAAGGACCAGATGCCCCA...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR CCA 72 bp ATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTaGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAG +
Preference number: 3 (lower is better)
Translates to: MRRRRHVWSPGM*TLKETGVSKVQ
Trigger: CTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR-3UTR CAA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATGCCTGCATGATGCACTaGGGCAGCAACCCGTGGCTC +
Preference number: 3 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHACMMH*GSNPWL
Trigger: GAGCCACGGGTTGCTGCCCAAGTGCATCATGCAGGC...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
3UTR TCA 72 bp TGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTaGGAAGTTACCATCAAGAAAATAAATCACAGAAGC +
Preference number: 3 (lower is better)
Translates to: CALAGDVPIALL*EVTIKKINHRS
Trigger: GCTTCTGTGATTTATTTTCTTGATGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGGGGAGCCGGTGTGCTTaGTGGCCTTGGCCCGGCCCC +
Preference number: 4 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLEGSRCA*WPWPGP
Trigger: GGGGCCGGGCCAAGGCCACCAAGCACACCGGCTCCC...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCCGCCAGCAGCTGCTTaGAGAAGGTGCACACGGCGG +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGPPAAA*RRCTRR
Trigger: CCGCCGTGTGCACCTTCTCCAAGCAGCTGCTGGCGG...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCACACGGCACCTCAGGTaGGGCTCCATCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGTRHLR*GSIPSS
Trigger: GCTGGAGGGGATGGAGCCCCACCTGAGGTGCCGTGT...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTAGGCAGGGAGGACGCTaGGCAGGTCCCGGAACGGGC +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVRQGGR*AGPGTG
Trigger: GCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCT...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CAA 72 bp TCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTaGGGTGTTCAGAGGTCCCCATCCACCGGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SQLQRPRPSVGH*GVQRSPSTGGW
Trigger: CCAGCCGCCGGTGGATGGGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR TCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGTCTGGCAGTCTCCCTaGGCCAGCAGCCAGTCCACC +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLVWQSP*ASSQST
Trigger: GGTGGACTGGCTGCTGGCTCAGGGAGACTGCCAGAC...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCTGTGCTCTGGCTGGTaGTGTCCCAATCGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGLCSGW*CPNRPA
Trigger: AGCAGGGCGATTGGGACATCACCAGCCAGAGCACAG...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGCAGGGAGCCCCCACCTaGACTCACCACCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQQGAPT*THHLPG
Trigger: CCCTGGCAGGTGGTGAGTTCAGGTGGGGGCTCCCTG...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCATGACCTTCAGCGCCTaGCGGCTGCCCTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGMTFSA*RLPSMW
Trigger: CCACATTGAGGGCAGCCGGCAGGCGCTGAAGGTCAT...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGCCCGGAACGGGCGGCTaGGGAAGCCTTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRAPGTGG*GSLGPS
Trigger: GGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGG...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCCGGGGTTTCAAAAGTaGAGGCGGAGCCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGPGFQK*RRSHPE
Trigger: CTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGG...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCTGGAGGCCTCCTGACTaGCTCGTGCTTCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGWRPPD*LVLPGH
Trigger: ATGCCCAGGAAGCACGAGCCAGTCAGGAGGCCTCCA...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTGCCTGGTCTTCCTCCTaGGCCTGCTCGCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVAWSSS*ACSPLG
Trigger: CCCCAGTGGCGAGCAGGCCCAGGAGGAAGACCAGGC...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTCCAGCCACTTGCGGCTaGCGTCGCGGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVPATCG*RRGCSP
Trigger: AGGAGAGCAGCCGCGACGCCAGCCGCAAGTGGCTGG...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTGGCGAGAGCAGGGACTaGCAGTGCAGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVGESRD*QCSRTP
Trigger: GGGCGTCCTGCTGCACTGCCAGTCCCTGCTCTCGCC...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCTCTCGTGCCCAGGGCTaGTGGCCCCAGTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: PSSRGRGPAWGIWVFRGPSRAQG*WPQFQG
Trigger: CCCCTGGAACTGGGGCCACCAGCCCTGGGCACGAGA...GGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR TCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCAGCAGTGGGAAGGCTaGATCAGCCTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGQQWEG*ISLVFL
Trigger: GAGGAAGACCAGGCTGATTCAGCCTTCCCACTGCTG...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCCGAGGATCTTGGCGGTaGGGCCGAAGCAGCCGCGGG +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGRGSWR*GRSSRG
Trigger: CCCGCGGCTGCTTCGGCCTCACCGCCAAGATCCTCG...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCCAGGGACTGCGCGTTaGTGTCCTGCTGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGPGTAR*CPAANP
Trigger: AGGATTTGCAGCAGGACATCAACGCGCAGTCCCTGG...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTTGCCTGTGCCACACATaGCCATCTGGCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLCLCHT*PSGRPP
Trigger: TGGGGGCCTGCCAGATGGTCATGTGTGGCACAGGCA...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCGGGGCATCTGGTCCTTaGCTCGCAGGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGGASGP*LAGFWP
Trigger: TGGCCAAAAACCTGCGAGTCAAGGACCAGATGCCCC...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTACGGTCTTCATGGCCTaGAGGGCACTCTGGACCGCG +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLTVFMA*RALWTA
Trigger: CGCGGTCCAGAGTGCCCTGCAGGCCATGAAGACCGT...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGCGTCTCTGCGCAGCTaGAGCTCCGTGTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLASLRS*SSVSVH
Trigger: GTGCACAGACACGGAGCTGCAGCTGCGCAGAGACGC...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTGGCGGGAGGCTCGGATaGCAGATGCCGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLGGRLG*QMPGGL
Trigger: AAGCCCTCCCGGCATCTGGCATCCGAGCCTCCCGCC...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCTCCGTGCCAAGATaGCCGCCTGCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWGSVPR*PPAPGT
Trigger: TGTCCCTGGAGCAGGCGGCCATCTTGGCACGGAGCC...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTAGGCGCGGAGCACCCTaGGGCATCTGGTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLRRGAP*GIWSLT
Trigger: AGTCAAGGACCAGATGCCCCAGGGTGCTCCGCGCCT...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGGCCTTGGGCCATCCCTaGAGAAGGCCAGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQALGHP*RRPALP
Trigger: AGGCAGCGCTGGCCTTCTCCAGGGATGGCCCAAGGC...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCGCCTTGGGCCATCCCTaGAGAAGGCCAGCGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PSSRGRGPAWGIWVFRGPALGHP*RRPALP
Trigger: AGGCAGCGCTGGCCTTCTCCAGGGATGGCCCAAGGC...GGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCCGTGCCCAGGGCTGGTaGCCCCAGTTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSRAQGW*PQFQGR
Trigger: CCGCCCCTGGAACTGGGGCCACCAGCCCTGGGCACG...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGGAGGGAAGCGCACCCTaGAGGGCGGGAGGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGEGSAP*RAGGSD
Trigger: ATCCGAGCCTCCCGCCCTCCAGGGTGCGCTTCCCTC...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCCAGCACGTGGTGCATaGAGCCATTGTTGCACAGAC +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGPARGA*SHCCTD
Trigger: GTCTGTGCAACAATGGCTTCATGCACCACGTGCTGG...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGAGGCCCCGGTCTTCCTaGCCAAGGGTCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGRPRSS*PRVPLA
Trigger: AGCCAGTGGGACCCTTGGTCAGGAAGACCGGGGCCT...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTAGGCCCCGGTCTTCCTaGCCAAGGGTCCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLRPRSS*PRVPLA
Trigger: AGCCAGTGGGACCCTTGGTCAGGAAGACCGGGGCCT...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTTGTCGAGGTAGAAGATaGCCTTCAGCGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLCRGRR*PSAPAG
Trigger: GCCGGCAGGCGCTGAAGGTCATCTTCTACCTCGACA...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTCAGTTCCAGGGGCGGTaGTGTCCAGAGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVQFQGR*CPELVW
Trigger: CCACACCAGCTCTGGACATCACCGCCCCTGGAACTG...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCTTCCTCCCCAGCTGTaGCCTTTCCCTGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGLPPQL*PFPEGI
Trigger: TATGCCTTCAGGGAAAGGTCACAGCTGGGGAGGAAG...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCCTCCTCAGCCAAGGATaGGTCGCAGGACCCACCCGA +
Preference number: 4 (lower is better)
Translates to: PSSRGRGPAWGIWVFRGPLLSQG*VAGPTR
Trigger: TCGGGTGGGTCCTGCGACGCATCCTTGGCTGAGGAG...GGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGCGTCTCTGCGCAGCTaGAGCTCCGTGTCTGTGCAC +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWASLRS*SSVSVH
Trigger: GTGCACAGACACGGAGCTGCAGCTGCGCAGAGACGC...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGAGGGCCGCCAGCAGCTaGTTGGAGAAGGTGCACACG +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWRAASS*LEKVHT
Trigger: CGTGTGCACCTTCTCCAAGCAGCTGCTGGCGGCCCT...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCTCCGCGGCCTGGCTaGCTGGAGAAGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGPPRPG*LEKAAP
Trigger: AGGGGCTGCCTTCTCCAGGCAGCCAGGCCGCGGAGG...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGGCCAAGATGGCCGCCTaGTCCAGGGACACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGAKMAA*SRDTLR
Trigger: CCTGAGCGTGTCCCTGGAGCAGGCGGCCATCTTGGC...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGAGAAGGCCAGCGCTaGCTGCTGTGTCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLGEGQR*LLCPPK
Trigger: TTTGGGAGGACACAGCAGGCAGCGCTGGCCTTCTCC...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCTTGCGGAACTCAAAGTaGGGCATGGTCACGATGGCG +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGLRNSK*GMVTMA
Trigger: CGCCATCGTGACCATGCCCCACTTTGAGTTCCGCAA...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGCGGCCACCAGGGCCTaGCAGAAGATCGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRAAATRA*QKIASL
Trigger: CAGAGACGCGATCTTCTGCCAGGCCCTGGTGGCCGC...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGGCACCCTGGGGCATCTaGTCCTTGACTCGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLEAPWGI*SLTRRF
Trigger: AAACCTGCGAGTCAAGGACCAGATGCCCCAGGGTGC...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGGGCCGCGGCCCAGCGTaGGGCATTTGGGTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGGRGPA*GIWVFR
Trigger: TCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCC...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGTGCTCCAGGCAGCCATaGAGCTTGTCCTGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLECSRQP*SLSCLS
Trigger: TGACAAGCAGGACAAGCTTCATGGCTGCCTGGAGCA...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGCAGTTCCAGGGGCGGTaGTGTCCAGAGCTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRAQFQGR*CPELVW
Trigger: CCACACCAGCTCTGGACATCACCGCCCCTGGAACTG...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGCCTTCGATGTGGGACTaGAGCTGCTCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQPSMWD*SCSRAS
Trigger: GGAAGCCCTGGAGCAGCTGCAGTCCCACATCGAAGG...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGGTGAACAGCGCTGTGTaGAGCCTCAGGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGVNSAV*SLRLAP
Trigger: TGGGGCCAGCCTGAGGCTGCACACAGCGCTGTTCAC...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCCCCGGAACGGGCGGCTaGGGAAGCCTTGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSPGTGG*GSLGPS
Trigger: GGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGG...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGAGGCCAGGCACCAGCTaGTCCCATCAGCTCTATGGG +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQRPGTS*SHQLYG
Trigger: CCCATAGAGCTGATGGGAGCAGCTGGTGCCTGGCCT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCGACCGCGGGGTGGTCTaGGTGCTTGCCGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGDRGVV*VLAGSP
Trigger: AGGACTCCCGGCAAGCACCCAGACCACCCCGCGGTC...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAAGCCTGGTCTTCCTCCTaGGCCTGCTCGCCACTGGGG +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQAWSSS*ACSPLG
Trigger: CCCCAGTGGCGAGCAGGCCCAGGAGGAAGACCAGGC...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGCCGAAGCTGCCATCATaGAGACCCTGGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWPKLPS*RPWPWG
Trigger: TCCCCAAGGCCAGGGTCTCCATGATGGCAGCTTCGG...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGAAGGGTCCCACTGGCTaGCCCGAAGCTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWKGPTG*PEAAIM
Trigger: CATGATGGCAGCTTCGGGCCAGCCAGTGGGACCCTT...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGTCATCACAGCGAGGGTaGCCAGGCTTGTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQSSQRG*PGLSRK
Trigger: CTTCCGGGACAAGCCTGGCCACCCTCGCTGTGATGA...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTCCTTCTCCGCAATCATaGCGTAGGCATCACGCTCCA +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLPSPQS*RRHHAP
Trigger: TGGAGCGTGATGCCTACGTCATGATTGCGGAGAAGG...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGCGGAAACATGGTGGATaGTGCCATTCTCCAACAGGG +
Preference number: 4 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLERKHGG*CHSPTG
Trigger: CCCTGTTGGAGAATGGCATCATCCACCATGTTTCCG...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGACATTGTCCAGCTCTaGCAGCGTCACCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLDIVQL*QRHPDV
Trigger: GACATCTGGGTGACGCTGTCAGAGCTGGACAATGTC...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGCCAGGGACTGCGCGTTaGTGTCCTGCTGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWPGTAR*CPAANP
Trigger: AGGATTTGCAGCAGGACATCAACGCGCAGTCCCTGG...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTGCTCATCCAGGGCATTaGTGGGGCGGATCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLAHPGH*WGGSAG
Trigger: ACCAGCTGATCCGCCCCATCAATGCCCTGGATGAGC...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCTGCCTGTGCCACACATaGCCATCTGGCAGGCCCCCA +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGCLCHT*PSGRPP
Trigger: TGGGGGCCTGCCAGATGGTCATGTGTGGCACAGGCA...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCTTCTGGCAGGCGTGTaGAGAATGGGCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGLLAGV*RMGRPR
Trigger: CCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAG...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTATGTGGGACTGCAGCTaGTCCAGGGCTTCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVMWDCS*SRASSF
Trigger: GAAGCTGGAAGCCCTGGAGCAGCTGCAGTCCCACAT...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCACGCCGTGTTCCAGGTaGACGTTGTCCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PSSRGRGPAWGIWVFRGPTPCSR*TLSTVR
Trigger: CCTGACTGTGGACAACGTGCACCTGGAACACGGCGT...GGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCTGGCTGGCCCGAAGCTaGCATCATGGAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGWLARS*HHGDPG
Trigger: GCCAGGGTCTCCATGATGGCAGCTTCGGGCCAGCCA...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCAGGGCCGCCAGCAGCTaGTTGGAGAAGGTGCACACG +
Preference number: 4 (lower is better)
Translates to: HPSSFWQACEEWAGPGPIRAASS*LEKVHT
Trigger: CGTGTGCACCTTCTCCAAGCAGCTGCTGGCGGCCCT...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTTCAGCGCCTGCCGGCTaGCCTCAATGTGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVSAPAG*PQCGRR
Trigger: TCTTCTACCACATTGAGGGCAGCCGGCAGGCGCTGA...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTACTTTCTCCAGGGACTaGGCGTTGATGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLTFSRD*ALMSCC
Trigger: GCAGCAGGACATCAACGCGCAGTCCCTGGAGAAAGT...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCGGCTCGGATGCCAGATaGCGGGAGGGCTTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: HPSSFWQACEEWAGPGPIGSDAR*REGFKL
Trigger: GAGCTTGAAGCCCTCCCGGCATCTGGCATCCGAGCC...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGCCAAAGGGATGTCCGTaGTCTTCCGGCCTCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQPKGCP*SSGLPE
Trigger: TTCTGGGAGGCCGGAAGACCACGGACATCCCTTTGG...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCCTCTGGACCGCGGGGTaGTCTGGGTGCTTGCCGGGA +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSLWTAG*SGCLPG
Trigger: TCCCGGCAAGCACCCAGACCACCCCGCGGTCCAGAG...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp CAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCCATGGAGGCCTCCTGACTaGCTCGTGCTTCCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: QLQRPRPSVGHLGVQRSPWRPPD*LVLPGH
Trigger: ATGCCCAGGAAGCACGAGCCAGTCAGGAGGCCTCCA...TGGGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGATCTTCTCCAGCACATaGCACCTGACGCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQIFSST*HLTPAV
Trigger: CACGGCAGGCGTCAGGTGCCATGTGCTGGAGAAGAT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCTCCATGAGGTTGATGTaGCAATTGGTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GREDAGQVPERAAAEALGSMRLM*QLVGQK
Trigger: CTTCTGCCCCACCAATTGCCACATCAACCTCATGGA...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGCTGGGTGTACGACATaGGGTTCAGGTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWAGCTT*GSGGLA
Trigger: AGCAAGGCCACCTGAACCCCATGTCGTACACCCAGC...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTGCTGGGTGTACGACATaGGGTTCAGGTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVAGCTT*GSGGLA
Trigger: AGCAAGGCCACCTGAACCCCATGTCGTACACCCAGC...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTTCCTGGATGCTAATCTaGATCAGGCTCCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVSWMLI*IRLRPR
Trigger: CCGTGGCCGGAGCCTGATCCAGATTAGCATCCAGGA...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCGGCTCCGTGCCAAGATaGCCGCCTGCTCCAGGGACA +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGGSVPR*PPAPGT
Trigger: TGTCCCTGGAGCAGGCGGCCATCTTGGCACGGAGCC...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTCACCCCTCCAGCTTCTaGCAGGCGTGTGAAGAATGG +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVHPSSF*QACEEW
Trigger: CCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCAGCTCCAACCCTGGCTaGCCACCTCTCAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: HPSSFWQACEEWAGPGPISSNPG*PPLRPL
Trigger: CAAGGGCCTGAGAGGTGGCCAGCCAGGGTTGGAGCT...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGAAGGCATACCGAAGCTaGGGGGACAAACTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQKAYRS*GDKLPR
Trigger: CCTCGGCAGTTTGTCCCCCCAGCTTCGGTATGCCTT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGCACATGGCACCTaGCGCCTGCCGTGCTCACAT +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGPAHGT*RLPCSH
Trigger: ATGTGAGCACGGCAGGCGTCAGGTGCCATGTGCTGG...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTGACATTGTCCAGCTCTaGCAGCGTCACCCAGATGTC +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVDIVQL*QRHPDV
Trigger: GACATCTGGGTGACGCTGTCAGAGCTGGACAATGTC...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTGGACAAAGGACTTCATaGGGCGGCAGAGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVGQRTS*GGRAHP
Trigger: TGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGTCC...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGCCGAGGAGATGGGGATaGGGCCGGCGCCCACACTCC +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGPRRWG*GRRPHS
Trigger: GGAGTGTGGGCGCCGGCCTCATCCCCATCTCCTCGG...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGGGGCATCTGGTCCTTaGCTCGCAGGTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRAGASGP*LAGFWP
Trigger: TGGCCAAAAACCTGCGAGTCAAGGACCAGATGCCCC...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGCCACGTTCTGCCGGATaGGATGCAGGAATGCCGACT +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGPRSAG*DAGMPT
Trigger: AGTCGGCATTCCTGCATCGCATCCGGCAGAACGTGG...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGCTCCTGACTGGCTCGTaGTTCCTGGGCATCCTCATG +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRALLTGS*FLGILM
Trigger: CATGAGGATGCCCAGGAAGCACGAGCCAGTCAGGAG...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTGCAGCTCCGTGTCTGTaGACTTCAGCAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLAAPCL*TSARPG
Trigger: TCCTGGCCTTGCTGAAGTGCACAGACACGGAGCTGC...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCCAAGAAGATCGCGTCTCTaGGCAGCTGCAGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: QLQRPRPSVGHLGVQRSPRRSRL*AAAAPC
Trigger: ACACGGAGCTGCAGCTGCGCAGAGACGCGATCTTCT...TGGGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCCTGCTCCAGCCACTTaGGGCTGGCGTCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFPAPAT*GWRRGC
Trigger: GCAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTCAGCGCCTGCCGGCTaGCCTCAATGTGGTAGAAGA +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGSAPAG*PQCGRR
Trigger: TCTTCTACCACATTGAGGGCAGCCGGCAGGCGCTGA...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCATGACCTTCAGCGCCTaGCGGCTGCCCTCAATGTGG +
Preference number: 4 (lower is better)
Translates to: HPSSFWQACEEWAGPGPIMTFSA*RLPSMW
Trigger: CCACATTGAGGGCAGCCGGCAGGCGCTGAAGGTCAT...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGCTCAGGGTGCTCCTCTaGATGCCTGTGCCACACATG +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRALRVLL*MPVPHM
Trigger: CATGTGTGGCACAGGCATGCAGAGGAGCACCCTGAG...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTATGATGTCCGTGGCCTaGATGATGCACTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVMMSVA*MMHLGS
Trigger: GCTGCCCAAGTGCATCATGCAGGCCACGGACATCAT...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCGACAAGGCCACTGCCTaGCCTCGTGTATGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSDKATA*PRVCCG
Trigger: GCCGCAGCATACACGAGGGCAGGCAGTGGCCTTGTC...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGCCCCGTGGTCCTCCCTaGCCCAGGCCTGAAGCTCAC +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPPRGPP*PRPEAH
Trigger: GTGAGCTTCAGGCCTGGGGCAGGGAGGACCACGGGG...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGAGCATAGACGTACGGTaGGGCAGCTCCACGAATCTG +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQSIDVR*GSSTNL
Trigger: CAGATTCGTGGAGCTGCCCCACCGTACGTCTATGCT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTAGCATAGACGTACGGTaGGGCAGCTCCACGAATCTG +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVSIDVR*GSSTNL
Trigger: CAGATTCGTGGAGCTGCCCCACCGTACGTCTATGCT...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCTTGTTTGAAGGGTaGGCTGACCCTGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWGLFEG*ADPALQ
Trigger: CTGAAGAGCAGGGTCAGCCCACCCTTCAAACAAGCC...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCGACATGGGGTTCAGGTaGCCTTGCTCCGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: HPSSFWQACEEWAGPGPIDMGFR*PCSGSR
Trigger: CCTTGACCCGGAGCAAGGCCACCTGAACCCCATGTC...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGTGGTGATGCAGTGCTaGGTGTACGACATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWVVMQC*VYDMGF
Trigger: GAACCCCATGTCGTACACCCAGCACTGCATCACCAC...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCGCGGCCACCAGGGCCTaGCAGAAGATCGCGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFAATRA*QKIASL
Trigger: CAGAGACGCGATCTTCTGCCAGGCCCTGGTGGCCGC...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGTTCCTCCTTCACTGTaGCTGGCGAGAGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRAVPPSL*LARAGT
Trigger: AGTCCCTGCTCTCGCCAGCCACAGTGAAGGAGGAAC...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGAGGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTAGATGTCCTCCAGCATaGTCCGTTCCTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: RRQGGRWAGPGTGGCGSLRCPPA*SVPPSL
Trigger: CAGTGAAGGAGGAACGGACCATGCTGGAGGACATCT...AAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGCTATCTTTACCGCCGTaGTGCTGGCATCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGLSLPP*CWHPWA
Trigger: TGCCCACGGATGCCAGCACCACGGCGGTAAAGATAG...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCCGGCTGCGGAAGCCTTaGGCCATCCCTGGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFRLRKP*AIPGEG
Trigger: GCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCG...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGCACCCCTCCAGCTTCTaGCAGGCGTGTGAAGAATGG +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRAHPSSF*QACEEW
Trigger: CCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAACGTTCCCTTGGGTTCTaGGGACGCAGGAGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQRSLGF*GRRSRR
Trigger: CCTTCGGCTCCTGCGTCCCCAGAACCCAAGGGAACG...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTCCATGACGTTCCCTTaGGTTCTGGGGACGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGSMTFP*VLGTQE
Trigger: CTCCTGCGTCCCCAGAACCCAAGGGAACGTCATGGA...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCTGTCCAGAGCTGGTGTaGCTCTCGGGGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGCPELV*LSGILW
Trigger: CCAGAGGATCCCCGAGAGCCACACCAGCTCTGGACA...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGTGTGCTTGGTGGCCTTaGCCCGGCCCCCGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPCAWWP*PGPRGP
Trigger: AGGACCACGGGGGCCGGGCCAAGGCCACCAAGCACA...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR TCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCGCTCCCGCTCGCGGATaGTGGCATCCAGCCACTTCT +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSAPARG*WHPATS
Trigger: AGAAGTGGCTGGATGCCATCATCCGCGAGCGGGAGC...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGTCACCTGCTCATTCTTaGACTGGTGCTTGTCGGAAA +
Preference number: 4 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLESPAHS*TGACRK
Trigger: TTTCCGACAAGCACCAGTTCAAGAATGAGCAGGTGA...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCTGTCCACAGTCAGGGTaGCCATGGGGCTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGCPQSG*PWGCPH
Trigger: GTGAGGACAGCCCCATGGTCACCCTGACTGTGGACA...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCTCTCGCTCTCTTCACTaGCCAGGGGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSSRSLH*PGAGRR
Trigger: CCTCCTCCCTGCCCCTGGTCAGTGAAGAGAGCGAGA...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGGACAAAGGACTTCATaGGGCGGCAGAGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRAGQRTS*GGRAHP
Trigger: TGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGTCC...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCTGTCCGTGGCCTGCATaGTGCACTTGGGCAGCAACC +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGCPWPA*CTWAAT
Trigger: GGTTGCTGCCCAAGTGCATCATGCAGGCCACGGACA...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCACGCCGAGCGCCACTaGCTCCTCCCGAGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFHAERH*LLPSLA
Trigger: TGCCAGACTCGGGAGGAGGCAGTGGCGCTCGGCGTG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCGCGCCGACTCCGGAATaGCTGGAAGTGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSAPTPE*LEVLQD
Trigger: GTCCTGGAGCACTTCCAGGCATTCCGGAGTCGGCGC...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGCAATCCTCTGGCCAATaGTCTCCAGCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWQSSGQ*SPAWCH
Trigger: GTGACACCAAGCTGGAGAGCATTGGCCAGAGGATTG...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGATGGTGGTGATGCAGTaGTGGGTGTACGACATGGGG +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGMVVMQ*WVYDMG
Trigger: CCCCATGTCGTACACCCAGCACTGCATCACCACCAT...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCTGGCTGGCCCGAAGCTaGCATCATGGAGACCCTGGC +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFWLARS*HHGDPG
Trigger: GCCAGGGTCTCCATGATGGCAGCTTCGGGCCAGCCA...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCGGACCGAGTCTCGATTaGTGTTACACTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: PSSRGRGPAWGIWVFRGPGPSLD*CYTRCR
Trigger: CCTACAGCGAGTGTAACAGCAATCGAGACTCGGTCC...GGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCGTGAACAGCGCTGTGTaGAGCCTCAGGCTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFVNSAV*SLRLAP
Trigger: TGGGGCCAGCCTGAGGCTGCACACAGCGCTGTTCAC...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTAGCAAACGGTCTTCATaGCCTGCAGGGCACTCTGGA +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLSKRSS*PAGHSG
Trigger: TCCAGAGTGCCCTGCAGGCCATGAAGACCGTTTGCT...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTCGAAGACGCTGTCATTaGCAGCAAAGGCCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLRRRCH*QQRPRG
Trigger: TCCTCGAGGCCTTTGCTGCCAATGACAGCGTCTTCG...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGGCTTGTTTGAAGGGTaGGCTGACCCTGCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRAGLFEG*ADPALQ
Trigger: CTGAAGAGCAGGGTCAGCCCACCCTTCAAACAAGCC...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCCAGCCACTTGCGGCTaGCGTCGCGGCTGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFPATCG*RRGCSP
Trigger: AGGAGAGCAGCCGCGACGCCAGCCGCAAGTGGCTGG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGAGATGTCCTCCAGCATaGTCCGTTCCTCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQRCPPA*SVPPSL
Trigger: CAGTGAAGGAGGAACGGACCATGCTGGAGGACATCT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCCCAGCGTGGGGCATTTaGGTGTTCAGAGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGPAWGI*VFRGPH
Trigger: ATGGGGACCTCTGAACACCCAAATGCCCCACGCTGG...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGGGCCGCGGCCCAGCGTaGGGCATTTGGGTGTTCAGA +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPGRGPA*GIWVFR
Trigger: TCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCC...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCTCATCACAGCGAGGGTaGCCAGGCTTGTCCCGGAAG +
Preference number: 4 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSSSQRG*PGLSRK
Trigger: CTTCCGGGACAAGCCTGGCCACCCTCGCTGTGATGA...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGTGGTCACCTGGAATGTaGACGTTGAAGGAAACCGGG +
Preference number: 4 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQWSPGM*TLKETG
Trigger: CCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCA...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGAGGAGGAGACACGTGTaGTCACCTGGAATGTGGACG +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGRRRHV*SPGMWT
Trigger: CGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAAACTTCTTGCTCCCGGTaGCCCTGGATTTCCGCTTGC +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQTSCSR*PWISAC
Trigger: GCAAGCGGAAATCCAGGGTCACCGGGAGCAAGAAGT...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTAGAGGGAGCCGTTaGTGGATTTGGTCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLCRGSR*WIWSSW
Trigger: CCAAGAGGACCAAATCCATCAACGGCTCCCTCTACA...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGCGCTGCTCAGGGCCATaGGCCGCCTGCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRRCSGP*AACSSP
Trigger: TGGAGAACTGCAGGCGGCTCATGGCCCTGAGCAGCG...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCGCTCATCCAGGGCATTaGTGGGGCGGATCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSAHPGH*WGGSAG
Trigger: ACCAGCTGATCCGCCCCATCAATGCCCTGGATGAGC...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCACCGAGGAGATGGGGATaGGGCCGGCGCCCACACTCC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPPRRWG*GRRPHS
Trigger: GGAGTGTGGGCGCCGGCCTCATCCCCATCTCCTCGG...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGCTGGAATGTGGACGTTaGAGGAAACCGGGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWLECGR*RKPGFQ
Trigger: TTGAAACCCCGGTTTCCTTCAACGTCCACATTCCAG...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGCGATACATCACCTaGTCATTCTTGAACTGGTGC +
Preference number: 4 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLEKRYIT*SFLNWC
Trigger: GCACCAGTTCAAGAATGAGCAGGTGATGTATCGCTT...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGATCTTCCTCCCCACCTaGAGGCCAGCCACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPIFLPT*RPATSA
Trigger: GGCTGAGGTGGCTGGCCTGCAGGTGGGGAGGAAGAT...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGGGGTTCAGGTGGCCTTaGTCCGGGTCAAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPGFRWP*SGSRPM
Trigger: CATCGGCCTTGACCCGGAGCAAGGCCACCTGAACCC...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCTTGGGGATCACCCTCTaGAGCAGGCAAGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGLGITL*SRQALP
Trigger: TGGAAGTGCTTGCCTGCTGCAGAGGGTGATCCCCAA...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGCTGCTTGGAGAAGGTaGACACGGCGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRAAWRR*TRRPPG
Trigger: CCCTGGTGGCCGCCGTGTGCACCTTCTCCAAGCAGC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCGGCTGGCGTCGCGGCTaGTCTCCTCGTACTCGCCAT +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFGWRRG*SPRTRH
Trigger: ATGGCGAGTACGAGGAGAGCAGCCGCGACGCCAGCC...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGCCTGCTCCAGCCACTTaGGGCTGGCGTCGCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVPAPAT*GWRRGC
Trigger: GCAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGG...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTCCCGTGGCCGCCACCTaGTCCAGCCACTTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVPVAAT*SSHLRL
Trigger: CAGCCGCAAGTGGCTGGAGCAGGTGGCGGCCACGGG...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCGCCAAGATGGCCGCCTaGTCCAGGGACACGCTCAGG +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFAKMAA*SRDTLR
Trigger: CCTGAGCGTGTCCCTGGAGCAGGCGGCCATCTTGGC...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCAAGGCCAGCGCTGCCTaGTGTGTCCTCCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSKASAA*CVLPNP
Trigger: GGGATTTGGGAGGACACAGCAGGCAGCGCTGGCCTT...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCTCAGAGCAAATCTCGTaGCCAGGGCTGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFSEQIS*PGLVAP
Trigger: TGGGGCCACCAGCCCTGGGCACGAGATTTGCTCTGA...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGGACAAGGCCACTGCCTaGCCTCGTGTATGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPDKATA*PRVCCG
Trigger: GCCGCAGCATACACGAGGGCAGGCAGTGGCCTTGTC...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCGCAGCTCCACGAATCTaGAAGCACAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSAAPRI*KHSVSG
Trigger: GCCGGACACACTGTGCTTCCAGATTCGTGGAGCTGC...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp CCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCTGTTACTTCTCACGCTaGTGTAGGACAGGACCGAGT +
Preference number: 4 (lower is better)
Translates to: PSSRGRGPAWGIWVFRGPCYFSR*CRTGPS
Trigger: ACTCGGTCCTGTCCTACACCAGCGTGAGAAGTAACA...GGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGTCCTGCTTGTCAGATaGGATCCGCATGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGVLLVR*DPHVTG
Trigger: CCCTGTGACATGCGGATCCCATCTGACAAGCAGGAC...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGCCGCCAGCAGCTGCTTaGAGAAGGTGCACACGGCGG +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGPPAAA*RRCTRR
Trigger: CCGCCGTGTGCACCTTCTCCAAGCAGCTGCTGGCGG...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCGGCGGGAGGGCAGCTTaGAGAAGTGGTAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFGGRAA*RSGSCR
Trigger: TCGACAGCTACCACTTCTCCAAGCTGCCCTCCCGCC...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTGCACCAGGCTTTGGGTaGACAAAGGACTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLAPGFG*TKDFMR
Trigger: CCTCATGAAGTCCTTTGTCCACCCAAAGCCTGGTGC...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGAGGCGCGGAGCACCCTaGGGCATCTGGTCCTTGACT +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPRRGAP*GIWSLT
Trigger: AGTCAAGGACCAGATGCCCCAGGGTGCTCCGCGCCT...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTAGGCAGGGAGGACGCTaGGCAGGTCCCGGAACGGGC +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGRQGGR*AGPGTG
Trigger: GCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCCT...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGTGCCCAGGGCTGGTaGCCCCAGTTCCAGGGGCGG +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNRAQGW*PQFQGR
Trigger: CCGCCCCTGGAACTGGGGCCACCAGCCCTGGGCACG...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGACACGGCACCTCAGGTaGGGCTCCATCCCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGTRHLR*GSIPSS
Trigger: GCTGGAGGGGATGGAGCCCCACCTGAGGTGCCGTGT...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCTGGCTTCCTGTGCTCTaGCTGGTGATGTCCCAATCG +
Preference number: 4 (lower is better)
Translates to: HPSSFWQACEEWAGPGPIWLPVL*LVMSQS
Trigger: CGATTGGGACATCACCAGCCAGAGCACAGGAAGCCA...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGCAGTGCACAATGCGCTaGCCCTGGGCCCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRQCTMR*PWALPH
Trigger: ATGGGGGAGGGCCCAGGGCCAGCGCATTGTGCACTG...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCTTCCCAAGTTCATGCTaGGACTGCGGCTCCGGGTGT +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFFPSSC*DCGSGC
Trigger: ACACCCGGAGCCGCAGTCTCAGCATGAACTTGGGAA...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGACACCAGGTCCTCATTaGTGGAGTAGATCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPALVYAAAREGSAPWRATPGPH*WSRSSS
Trigger: GGAGGAAGATCTACTCCATCAATGAGGACCTGGTGT...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGTGTCCACAGTCAGGGTaGCCATGGGGCTGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPCPQSG*PWGCPH
Trigger: GTGAGGACAGCCCCATGGTCACCCTGACTGTGGACA...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCCCACATCCAGCTTGGTaGAGAGCTGCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSPHPAW*RAAGRH
Trigger: ATGCCTACCTGCAGCTCTTCACCAAGCTGGATGTGG...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR TCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTCCAATCGCCCTGCTCTaGGAAGTTACCATCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVPIALL*EVTIKK
Trigger: TTTCTTGATGGTAACTTCTCAGAGCAGGGCGATTGG...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCTGCAGGAATGCCGACTaGAAGAAGCGCAAGGTGCCC +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSCRNAD*KKRKVP
Trigger: GGGCACCTTGCGCTTCTTGCAGTCGGCATTCCTGCA...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCGAGTCGGCCACGTTCTaGCGGATGCGATGCAGGAAT +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSESATF*RMRCRN
Trigger: ATTCCTGCATCGCATCCGGCAGAACGTGGCCGACTC...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTGGGCTTTCTCATGGTTaGTGCAATACTCCTCGTACA +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVGLSHG*CNTPRT
Trigger: TGTACGAGGAGTATTGCAGCAACCATGAGAAAGCCC...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGGGTTCAGGTGGCCTTaGTCCGGGTCAAGGCCGATG +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRGFRWP*SGSRPM
Trigger: CATCGGCCTTGACCCGGAGCAAGGCCACCTGAACCC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGAGCAGGGACTGGCAGTaGAGCAGGACGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVSRDWQ*SRTPVA
Trigger: GGCCACGGGCGTCCTGCTGCACTGCCAGTCCCTGCT...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCAACCCGTGGCTCCGTaGCAAGATGGCCGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: QALVASHSKRASSNTGQPQPVAP*QDGRLL
Trigger: GAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTG...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAAATGATGTCCGTGGCCTaGATGATGCACTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQMMSVA*MMHLGS
Trigger: GCTGCCCAAGTGCATCATGCAGGCCACGGACATCAT...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGGCCTGCCCTCGTGTATaGTGCGGCAAGAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPACPRV*CGKRGK
Trigger: CTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGC...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCCGACTCCGGAATGCCTaGAAGTGCTCCAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFRLRNA*KCSRTS
Trigger: TGAGGTCCTGGAGCACTTCCAGGCATTCCGGAGTCG...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCTGCCCACTGAGGGGGTaGTCTTGGGGTAGGACACTT +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFCPLRG*SWGRTL
Trigger: AAGTGTCCTACCCCAAGACCACCCCCTCAGTGGGCA...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCTGCCCACTGAGGGGGTaGTCTTGGGGTAGGACACTT +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSCPLRG*SWGRTL
Trigger: AAGTGTCCTACCCCAAGACCACCCCCTCAGTGGGCA...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGAAGGGTCCCACTGGCTaGCCCGAAGCTGCCATCATG +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPKGPTG*PEAAIM
Trigger: CATGATGGCAGCTTCGGGCCAGCCAGTGGGACCCTT...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCAGTCGCGATAACTCATaGTGTCGTGGCCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGSRDNS*CRGLSP
Trigger: AGGACTCAGGCCACGACACCATGAGTTATCGCGACT...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCAAGGCCAGGAGCAGCTaGTTCTTCCCATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: HPSSFWQACEEWAGPGPIKARSS*FFPSST
Trigger: TGTGGAAGATGGGAAGAACCAGCTGCTCCTGGCCTT...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGTCTCGTGCCCAGGGCTaGTGGCCCCAGTTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVSRAQG*WPQFQG
Trigger: CCCCTGGAACTGGGGCCACCAGCCCTGGGCACGAGA...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCACACCGGCCAACCGCTaGAGAATGGAGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFTPANR*RMEGGG
Trigger: TCCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGT...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGAGCTCCAACCCTGGCTaGCCACCTCTCAGGCCCTTG +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGSSNPG*PPLRPL
Trigger: CAAGGGCCTGAGAGGTGGCCAGCCAGGGTTGGAGCT...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGAGGGAAGCGCACCCTaGAGGGCGGGAGGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGEGSAP*RAGGSD
Trigger: ATCCGAGCCTCCCGCCCTCCAGGGTGCGCTTCCCTC...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCAGTGCACAATGCGCTaGCCCTGGGCCCTCCCCCAT +
Preference number: 4 (lower is better)
Translates to: QALVASHSKRASSNTGQPQCTMR*PWALPH
Trigger: ATGGGGGAGGGCCCAGGGCCAGCGCATTGTGCACTG...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGCACGTTCTCCAGCACTaGGAGGGGAGATGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGHVLQH*EGRCRG
Trigger: CCCCCGACATCTCCCCTCCCAGTGCTGGAGAACGTG...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR TCA 90 bp ACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTGATGGGGCGGATCCCAGCACATGGCACCTaGCGCCTGCCGTGCTCACAT +
Preference number: 4 (lower is better)
Translates to: TKDFMRRQSSSRALMGRIPAHGT*RLPCSH
Trigger: ATGTGAGCACGGCAGGCGTCAGGTGCCATGTGCTGG...GATCCGCCCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR TCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGGAAGCTCACCTTTCGTaGACAGCGCTGTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPEAHLS*TALCAA
Trigger: GGCTGCACACAGCGCTGTTCACGAAAGGTGAGCTTC...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGAGGCATCACGCTCCATaGCCAGCTTCAGGCTCTCGC +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGRHHAP*PASGSR
Trigger: GCGAGAGCCTGAAGCTGGGCATGGAGCGTGATGCCT...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAAATGGCACCTGACGCCTaGCGTGCTCACATACTCATA +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQMAPDA*RAHILI
Trigger: TATGAGTATGTGAGCACGGCAGGCGTCAGGTGCCAT...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCCAATCCTCTGGCCAATaGTCTCCAGCTTGGTGTCAC +
Preference number: 4 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSQSSGQ*SPAWCH
Trigger: GTGACACCAAGCTGGAGAGCATTGGCCAGAGGATTG...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTGCGCGTTGATGTCCTaGTGCAAATCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFCALMS*CKSSAA
Trigger: GGCCGCGGAGGATTTGCAGCAGGACATCAACGCGCA...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGTCTTTACCGCCGTGGTaGTGGCATCCGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRSLPPW*WHPWAG
Trigger: ACCTGCCCACGGATGCCAGCACCACGGCGGTAAAGA...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCAGGCCAGGCACCAGCTaGTCCCATCAGCTCTATGGG +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFRPGTS*SHQLYG
Trigger: CCCATAGAGCTGATGGGAGCAGCTGGTGCCTGGCCT...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGATGTCCCAATCGCCCTaGTCTGAGAAGTTACCATCA +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGMSQSP*SEKLPS
Trigger: TGATGGTAACTTCTCAGAGCAGGGCGATTGGGACAT...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGACATGGGGTTCAGGTaGCCTTGCTCCGGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRDMGFR*PCSGSR
Trigger: CCTTGACCCGGAGCAAGGCCACCTGAACCCCATGTC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCCGAAGCTGCCATCATaGAGACCCTGGCCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFPKLPS*RPWPWG
Trigger: TCCCCAAGGCCAGGGTCTCCATGATGGCAGCTTCGG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAAAGTCGCGATAACTCATaGTGTCGTGGCCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQSRDNS*CRGLSP
Trigger: AGGACTCAGGCCACGACACCATGAGTTATCGCGACT...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCGGCGGGAGGGCAGCTTaGAGAAGTGGTAGCTGTCGA +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFGGRAA*RSGSCR
Trigger: TCGACAGCTACCACTTCTCCAAGCTGCCCTCCCGCC...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGTGTCCAGAGCTGGTGTaGCTCTCGGGGATCCTCTGG +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGCPELV*LSGILW
Trigger: CCAGAGGATCCCCGAGAGCCACACCAGCTCTGGACA...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTACAATGCGCTGGCCCTaGGCCCTCCCCCATTTCCCG +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGTMRWP*ALPHFP
Trigger: CGGGAAATGGGGGAGGGCCCAGGGCCAGCGCATTGT...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTTGCCCAAGATCTCGTTaGGGACGCAGAGGCGGAGGC +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVCPRSR*GRRGGG
Trigger: GCCTCCGCCTCTGCGTCCTCAACGAGATCTTGGGCA...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACGAGGCCCTTCTCCACTaGGTCGGCCACGTTCTGCCG +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNEALLH*VGHVLP
Trigger: CGGCAGAACGTGGCCGACTCAGTGGAGAAGGGCCTC...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGTGCAGATGTCTGTaGGGTTGGAACCCTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRECRCL*GWNPPS
Trigger: GCTGGGAGGGTTCCAACCTCACAGACATCTGCACTC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTCATGGTGTCGTGGCCTaGGTCCTCCTGGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVHGVVA*VLLVLL
Trigger: GAGGAGGACCAGGAGGACTCAGGCCACGACACCATG...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGGCCTCCCAGAAGCATaGAGCTCAAAAGGAAGGCGC +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRGLPEA*SSKGRR
Trigger: GCGCCTTCCTTTTGAGCTGCATGCTTCTGGGAGGCC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGGAGGAGCGGGTACTTaGAGATCCTCTGGATCGGAG +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRGGAGT*RSSGSE
Trigger: CTCCGATCCAGAGGATCTGCAAGTACCCGCTCCTCC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAATCCAGCTTCTCCATCTaGCGCTTGGTCTCATTGATG +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQSSFSI*RLVSLM
Trigger: CATCAATGAGACCAAGCGGCAGATGGAGAAGCTGGA...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCCCCTTTCCTGGATGTTaGCCGCAGAGATCTTTAACA +
Preference number: 4 (lower is better)
Translates to: HPSSFWQACEEWAGPGPIPFPGC*PQRSLT
Trigger: TGTTAAAGATCTCTGCGGGCAACATCCAGGAAAGGG...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTTTCAGGCTCTCGCGCTaGTCCCGCTCGCGGATGATG +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGFRLSR*SRSRMM
Trigger: CATCATCCGCGAGCGGGAGCAGCGCGAGAGCCTGAA...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCTTCTCCAGCACGTGGTaGATGAAGCCATTGTTGCAC +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGFSSTW*MKPLLH
Trigger: GTGCAACAATGGCTTCATGCACCACGTGCTGGAGAA...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAGCGCCGACTCCGGAATaGCTGGAAGTGCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPAPTPE*LEVLQD
Trigger: GTCCTGGAGCACTTCCAGGCATTCCGGAGTCGGCGC...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCTCCTGACTGGCTCGTaGTTCCTGGGCATCCTCATG +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFLLTGS*FLGILM
Trigger: CATGAGGATGCCCAGGAAGCACGAGCCAGTCAGGAG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACCTCCGCGGCCTGGCTaGCTGGAGAAGGCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTPPRPG*LEKAAP
Trigger: AGGGGCTGCCTTCTCCAGGCAGCCAGGCCGCGGAGG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp TGGGTGGACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTGATGGGGCGTTGATGTCCTGCTaGAAATCCTCCGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WVDKGLHEAAELIQGIDGALMSC*KSSAAW
Trigger: CCAGGCCGCGGAGGATTTGCAGCAGGACATCAACGC...CCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGTCCACCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCTCAGGGTGCTCCTCTaGATGCCTGTGCCACACATG +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFLRVLL*MPVPHM
Trigger: CATGTGTGGCACAGGCATGCAGAGGAGCACCCTGAG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCATGTCCCAATCGCCCTaGTCTGAGAAGTTACCATCA +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGMSQSP*SEKLPS
Trigger: TGATGGTAACTTCTCAGAGCAGGGCGATTGGGACAT...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAGGCTCGGATGCCAGATaGCGGGAGGGCTTCAAGCTC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPGSDAR*REGFKL
Trigger: GAGCTTGAAGCCCTCCCGGCATCTGGCATCCGAGCC...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGGCCTGCCCTCGTGTATaGTGCGGCAAGAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: QALVASHSKRASSNTGQPACPRV*CGKRGK
Trigger: CTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGC...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGGGTTGGGAGCCGGTGTaGTTGGTGGCCTTGGCCCGG +
Preference number: 4 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLGWEPV*LVALAR
Trigger: CCGGGCCAAGGCCACCAAGCACACCGGCTCCCAACC...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCTCAGGGCTTTCTCATaGTTGCTGCAATACTCCTCG +
Preference number: 4 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGLRAFS*LLQYSS
Trigger: CGAGGAGTATTGCAGCAACCATGAGAAAGCCCTGAG...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGCAAACCACTTATTCTTaGCCGTGTTGTGGATCTTCC +
Preference number: 4 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGQTTYS*PCCGSS
Trigger: GGAAGATCCACAACACGGCCAAGAATAAGTGGTTTG...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCACACTGGGGTCCTCAGTaGAGGCCTCCTGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPHWGPQ*RPPDWL
Trigger: GAGCCAGTCAGGAGGCCTCCACTGAGGACCCCAGTG...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTCACTGGGGTCCTCAGTaGAGGCCTCCTGACTGGCTC +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGHWGPQ*RPPDWL
Trigger: GAGCCAGTCAGGAGGCCTCCACTGAGGACCCCAGTG...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGAAGGCTGAATCAGCCTaGTCTTCCTCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGKAESA*SSSWAC
Trigger: GCAGGCCCAGGAGGAAGACCAGGCTGATTCAGCCTT...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGCGAAGACGCTGTCATTaGCAGCAAAGGCCTCGAGGA +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPRRRCH*QQRPRG
Trigger: TCCTCGAGGCCTTTGCTGCCAATGACAGCGTCTTCG...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCCAATGCTCTCCAGCTTaGTGTCACAGATGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSQCSPA*CHRCCG
Trigger: TCCGCAACATCTGTGACACCAAGCTGGAGAGCATTG...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAATCCATGAGGTTGATGTaGCAATTGGTGGGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQSMRLM*QLVGQK
Trigger: CTTCTGCCCCACCAATTGCCACATCAACCTCATGGA...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGCCATCATGGAGACCCTaGCCTTGGGGATCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGPSWRP*PWGSPS
Trigger: AGAGGGTGATCCCCAAGGCCAGGGTCTCCATGATGG...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTTTGGGCAGCAACCCGTaGCTCCGTGCCAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGLGSNP*LRAKMA
Trigger: GGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAA...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGCAGAATCTCCACCCTTaGGCCCTGCTTCCGCATGAT +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPQNLHP*ALLPHD
Trigger: ATCATGCGGAAGCAGGGCCCAAGGGTGGAGATTCTG...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGGCACCCTGGGGCATCTaGTCCTTGACTCGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGAPWGI*SLTRRF
Trigger: AAACCTGCGAGTCAAGGACCAGATGCCCCAGGGTGC...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCTGGTCACCTGGAATGTaGACGTTGAAGGAAACCGGG +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSWSPGM*TLKETG
Trigger: CCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCA...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAGCCGGTGTGCTTGGTaGCCTTGGCCCGGCCCCCGT +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYSRCAW*PWPGPR
Trigger: ACGGGGGCCGGGCCAAGGCCACCAAGCACACCGGCT...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR TCA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTCTTCTTCCGTCTTGCTaGTTTCACCAATTTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLLLPSC*FHQFLG
Trigger: TCCTAGAAATTGGTGAAATCAGCAAGACGGAAGAAG...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCTCACGTTGCTGCCATTaGCCTTCAGAATGCACTGAC +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSSRCCH*PSECTD
Trigger: GTCAGTGCATTCTGAAGGTCAATGGCAGCAACGTGA...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTGCTCCAGGCAGCCATaGAGCTTGTCCTGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFCSRQP*SLSCLS
Trigger: TGACAAGCAGGACAAGCTTCATGGCTGCCTGGAGCA...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTCCCGGTGTTTCCCAGTaGCCCTCTAACCCGTGTGAC +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVPGVSQ*PSNPCD
Trigger: GTCACACGGGTTAGAGGGTCACTGGGAAACACCGGG...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCATCCCTGCCCCAGGCCTaGAGCTCACCTTTCGTGAAC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPSLPQA*SSPFVN
Trigger: GTTCACGAAAGGTGAGCTTCAGGCCTGGGGCAGGGA...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR GCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAACTGCCGTCTTGGCCATaGAGACAAACCACTTATTCT +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQLPSWP*RQTTYS
Trigger: AGAATAAGTGGTTTGTCTGCATGGCCAAGACGGCAG...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTCGGAATGCCTGGAAGTaGTCCAGGACCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGRNAWK*SRTSGA
Trigger: TGCCCCTGAGGTCCTGGAGCACTTCCAGGCATTCCG...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCGCTCTTCAGTTGGGCTaGAAACTCCTGGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFALQLG*KLLVAG
Trigger: GCCTGCTACCAGGAGTTTGCAGCCCAACTGAAGAGC...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGATCTCACGGTCCTCCTaGTTGAGTAGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPISRSS*LSRKLR
Trigger: CCTCAGCTTCCTACTCAAGCAGGAGGACCGTGAGAT...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCACCCCATCTCGTCGCTaGCCAAGTAGGAGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFTPSRR*PSRSCY
Trigger: GTAACAGCTCCTACTTGGGCAGCGACGAGATGGGGT...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCTGGTTCATAGGGAAATaGTTGGTCTCTTCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGWFIGK*LVSSKA
Trigger: GGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCA...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTTGCGCGTTGATGTCCTaGTGCAAATCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVCALMS*CKSSAA
Trigger: GGCCGCGGAGGATTTGCAGCAGGACATCAACGCGCA...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCATGCCCTCGTGTATGCTaGGGCAAGAGAGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPCPRVC*GKRGKR
Trigger: GCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCA...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAATTTAAAGTAAACCAGTaGACAATGCGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQFKVNQ*TMRWPW
Trigger: CCAGGGCCAGCGCATTGTGCACTGGTTTACTTTAAA...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGTGGATTTGGTCCTCTTaGTGGACTTCTTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPWIWSS*WTSCSR
Trigger: CCGGGAGCAAGAAGTCCACCAAGAGGACCAAATCCA...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp ACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTGATGGGGCGGATCCGACTCCGGAATGCCTaGAAGTGCTCCAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: TKDFMRRQSSSRALMGRIRLRNA*KCSRTS
Trigger: TGAGGTCCTGGAGCACTTCCAGGCATTCCGGAGTCG...GATCCGCCCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGGTGGTGATGCAGTGCTaGGTGTACGACATGGGGTTC +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGVVMQC*VYDMGF
Trigger: GAACCCCATGTCGTACACCCAGCACTGCATCACCAC...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCTGTTACTTCTCACGCTaGTGTAGGACAGGACCGAGT +
Preference number: 4 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFCYFSR*CRTGPS
Trigger: ACTCGGTCCTGTCCTACACCAGCGTGAGAAGTAACA...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGGTCCTGCTTGTCAGATaGGATCCGCATGTCACAGGG +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGVLLVR*DPHVTG
Trigger: CCCTGTGACATGCGGATCCCATCTGACAAGCAGGAC...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTCTCCTTCACTGTGGCTaGCGAGAGCAGGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVLLHCG*REQGLA
Trigger: TGCCAGTCCCTGCTCTCGCCAGCCACAGTGAAGGAG...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTCTCCTTCACTGTGGCTaGCGAGAGCAGGGACTGGCA +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGLLHCG*REQGLA
Trigger: TGCCAGTCCCTGCTCTCGCCAGCCACAGTGAAGGAG...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTTGGGCAGCAACCCGTaGCTCCGTGCCAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNLGSNP*LRAKMA
Trigger: GGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTGATGGGGCGGATCCCAGCGTGGGGCATTTaGGTGTTCAGAGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: TKDFMRRQSSSRALMGRIPAWGI*VFRGPH
Trigger: ATGGGGACCTCTGAACACCCAAATGCCCCACGCTGG...GATCCGCCCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR TCA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAAGCCAAGAAATCCTTATaGACTTCCAGGATGTCTTCG +
Preference number: 4 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQAKKSL*TSRMSS
Trigger: CGAAGACATCCTGGAAGTTCATAAGGATTTCTTGGC...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTCGCAGAACTTGTCCTTaGATTTTAAGAAAACATTCC +
Preference number: 4 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVRRTCP*ILRKHS
Trigger: GGAATGTTTTCTTAAAATTCAAGGACAAGTTCTGCG...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGCCGCTTGGTCTCATTaGTGTTGGAGCAAACGGTCT +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRAAWSH*CWSKRS
Trigger: AGACCGTTTGCTCCAACATCAATGAGACCAAGCGGC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTCACACCCTTGGACATaGTGTCCTCCAGCTCACTTC +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFSHPWT*CPPAHF
Trigger: GAAGTGAGCTGGAGGACATCATGTCCAAGGGTGTGA...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCACAGCAGTGGGAAGGCTaGATCAGCCTGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPQQWEG*ISLVFL
Trigger: GAGGAAGACCAGGCTGATTCAGCCTTCCCACTGCTG...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACGCTGCTCAGGGCCATaGGCCGCCTGCAGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTRCSGP*AACSSP
Trigger: TGGAGAACTGCAGGCGGCTCATGGCCCTGAGCAGCG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGTCTCGCTCTCTTCACTaGCCAGGGGCAGGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLSRSLH*PGAGRR
Trigger: CCTCCTCCCTGCCCCTGGTCAGTGAAGAGAGCGAGA...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTTCTCCAGCACTTTCGTaGACAGCGCTGTGTGCAGCC +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGSPALS*TALCAA
Trigger: GGCTGCACACAGCGCTGTTCACGAAAGTGCTGGAGA...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTGTCCGTGGCCTGCATaGTGCACTTGGGCAGCAACC +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNCPWPA*CTWAAT
Trigger: GGTTGCTGCCCAAGTGCATCATGCAGGCCACGGACA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACGCGGGGTGGTCTGGGTaGTTGCCGGGAGTCCTCTTG +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYAGWSG*LPGVLL
Trigger: CAAGAGGACTCCCGGCAAGCACCCAGACCACCCCGC...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTACGCCGTGTTCCAGGTaGACGTTGTCCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGTPCSR*TLSTVR
Trigger: CCTGACTGTGGACAACGTGCACCTGGAACACGGCGT...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGGCTCTTCAGTTGGGCTaGAAACTCCTGGTAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QALVASHSKRASSNTGQPALQLG*KLLVAG
Trigger: GCCTGCTACCAGGAGTTTGCAGCCCAACTGAAGAGC...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAGCTGCTTGGAGAAGGTaGACACGGCGGCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTAAWRR*TRRPPG
Trigger: CCCTGGTGGCCGCCGTGTGCACCTTCTCCAAGCAGC...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTCTTTACCGCCGTGGTaGTGGCATCCGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNSLPPW*WHPWAG
Trigger: ACCTGCCCACGGATGCCAGCACCACGGCGGTAAAGA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACAAGGCCAGCGCTGCCTaGTGTGTCCTCCCAAATCCC +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNKASAA*CVLPNP
Trigger: GGGATTTGGGAGGACACAGCAGGCAGCGCTGGCCTT...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCCGGGGTTTCAAAAGTaGAGGCGGAGCCATCCCGAG +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNPGFQK*RRSHPE
Trigger: CTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGG...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTCAGAGCAAATCTCGTaGCCAGGGCTGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNSEQIS*PGLVAP
Trigger: TGGGGCCACCAGCCCTGGGCACGAGATTTGCTCTGA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGGTTTGTTCTTGCTGCTaGTCCCCTCCATCTCCTCGT +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGVCSCC*SPPSPR
Trigger: ACGAGGAGATGGAGGGGACCAGCAGCAAGAACAAAC...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAAAGGCTGAATCAGCCTaGTCTTCCTCCTGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPKAESA*SSSWAC
Trigger: GCAGGCCCAGGAGGAAGACCAGGCTGATTCAGCCTT...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAATCTTCTCCAGCACATaGCACCTGACGCCTGCCGTG +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPIFSST*HLTPAV
Trigger: CACGGCAGGCGTCAGGTGCCATGTGCTGGAGAAGAT...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTGATGGGGCGGATCACTCAAAGTGGGGCATaGTCACGATGGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TKDFMRRQSSSRALMGRITQSGA*SRWRCS
Trigger: TGAGCAGCGCCATCGTGACCATGCCCCACTTTGAGT...GATCCGCCCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCATCCTGGATGCTAATCTaGATCAGGCTCCGGCCACGG +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPSWMLI*IRLRPR
Trigger: CCGTGGCCGGAGCCTGATCCAGATTAGCATCCAGGA...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGACACGTGTGGTCACCTaGAATGTGGACGTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPTRVVT*NVDVEG
Trigger: TCCTTCAACGTCCACATTCCAGGTGACCACACGTGT...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTGATGGGGCGGATCTGGCTTCCTGTGCTCTaGCTGGTGATGTCCCAATCG +
Preference number: 4 (lower is better)
Translates to: TKDFMRRQSSSRALMGRIWLPVL*LVMSQS
Trigger: CGATTGGGACATCACCAGCCAGAGCACAGGAAGCCA...GATCCGCCCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAAAGGCATACCGAAGCTaGGGGGACAAACTGCCGAGG +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPKAYRS*GDKLPR
Trigger: CCTCGGCAGTTTGTCCCCCCAGCTTCGGTATGCCTT...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAACAATGCGCTGGCCCTaGGCCCTCCCCCATTTCCCG +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTTMRWP*ALPHFP
Trigger: CGGGAAATGGGGGAGGGCCCAGGGCCAGCGCATTGT...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGTCACGTTGCTGCCATTaGCCTTCAGAATGCACTGAC +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRSRCCH*PSECTD
Trigger: GTCAGTGCATTCTGAAGGTCAATGGCAGCAACGTGA...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACCCGGGTCAAGGCCGATaGGGGAGGGTTTGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYPGQGR*GRVCVQ
Trigger: TTGGACGCAAACCCTCCCTCATCGGCCTTGACCCGG...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACCGGGTCAAGGCCGATaGGGGAGGGTTTGCGTCCAA +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTPGQGR*GRVCVQ
Trigger: TTGGACGCAAACCCTCCCTCATCGGCCTTGACCCGG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTCCACATCCAGCTTGGTaGAGAGCTGCAGGTAGGCAT +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGPHPAW*RAAGRH
Trigger: ATGCCTACCTGCAGCTCTTCACCAAGCTGGATGTGG...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACATGGTGTCGTGGCCTaGGTCCTCCTGGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTHGVVA*VLLVLL
Trigger: GAGGAGGACCAGGAGGACTCAGGCCACGACACCATG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCTGGAATGTGGACGTTaGAGGAAACCGGGGTTTCAA +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFLECGR*RKPGFQ
Trigger: TTGAAACCCCGGTTTCCTTCAACGTCCACATTCCAG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCACTTCCTCCCCAGCTGTaGCCTTTCCCTGAAGGCATA +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPLPPQL*PFPEGI
Trigger: TATGCCTTCAGGGAAAGGTCACAGCTGGGGAGGAAG...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGGCAAGAAGCGCAAGGTaGCCACGTAGTCCCTCTCGG +
Preference number: 4 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLARSAR*PRSPSR
Trigger: CCGAGAGGGACTACGTGGGCACCTTGCGCTTCTTGC...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAGGTGGTCTGGGTGCTTaGCGGGAGTCCTCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTGGLGA*RESSWP
Trigger: TGGCCAAGAGGACTCCCGGCAAGCACCCAGACCACC...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCCCTGGATTTCCGCTTaGAGTAGACGAGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFPWISA*SRREGC
Trigger: ACAACCTTCTCGTCTACTGCAAGCGGAAATCCAGGG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTTCGGGCCTTGTAGGTaGCATCGTCGTAGCGGAAGC +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNFGPCR*HRRSGS
Trigger: GCTTCCGCTACGACGATGGCACCTACAAGGCCCGAA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAATGGTGGTGATGCAGTaGTGGGTGTACGACATGGGG +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPMVVMQ*WVYDMG
Trigger: CCCCATGTCGTACACCCAGCACTGCATCACCACCAT...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACCTCCTCAGCCAAGGATaGGTCGCAGGACCCACCCGA +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYLLSQG*VAGPTR
Trigger: TCGGGTGGGTCCTGCGACGCATCCTTGGCTGAGGAG...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATCCCGTGGCCGCCACCTaGTCCAGCCACTTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHPVAAT*SSHLRL
Trigger: CAGCCGCAAGTGGCTGGAGCAGGTGGCGGCCACGGG...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCAGCAGGGACTGGCAGTaGAGCAGGACGCCCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ISCHINKVRANLVPRAGGSRDWQ*SRTPVA
Trigger: GGCCACGGGCGTCCTGCTGCACTGCCAGTCCCTGCT...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCTTGTTCATCATCATGTaGTACAGCTTCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSLFIIM*YSFSPF
Trigger: GAAGGGGGAGAAGCTGTACCACATGATGATGAACAA...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGTGCTTGTCGGAAACATaGTGGATGATGCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPCLSET*WMMPFS
Trigger: GGAGAATGGCATCATCCACCATGTTTCCGACAAGCA...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTGGATCAGCAGGCGCTTaGCCAGAATGTTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVGSAGA*PECSPP
Trigger: TGGTGGAGAACATTCTGGCCAAGCGCCTGCTGATCC...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTACTCAAAGTGGGGCATaGTCACGATGGCGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVTQSGA*SRWRCS
Trigger: TGAGCAGCGCCATCGTGACCATGCCCCACTTTGAGT...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTTTGCGGAACTCAAAGTaGGGCATGGTCACGATGGCG +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGLRNSK*GMVTMA
Trigger: CGCCATCGTGACCATGCCCCACTTTGAGTTCCGCAA...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGCAATGCTCTCCAGCTTaGTGTCACAGATGTTGCGGA +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRQCSPA*CHRCCG
Trigger: TCCGCAACATCTGTGACACCAAGCTGGAGAGCATTG...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCTGTGGTAGAAGACGTTaGTGTTGGCCACATAGTTCT +
Preference number: 4 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSCGRRR*CWPHSS
Trigger: AGAACTATGTGGCCAACACCAACGTCTTCTACCACA...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACAGGCGTGTGAAGAATaGGCCGGCCCAGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTQACEE*AGPGPI
Trigger: GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAACACCGGCCAACCGCTaGAGAATGGAGGGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTTPANR*RMEGGG
Trigger: TCCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGT...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
3UTR CAA 72 bp CCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTaGTCTCTGATGCAAGATACAGTGACAAGGCCACTG +
Preference number: 4 (lower is better)
Translates to: PISRSRAKAGPP*SLMQDTVTRPL
Trigger: CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGATCTCCTCGTCAGCATaGAAGCGGAAGTACTGGGAC +
Preference number: 4 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVISSSA*KRKYWD
Trigger: GTCCCAGTACTTCCGCTTTCATGCTGACGAGGAGAT...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACAGCAGAAGGACTGGTTaGGGATGGACTCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNSRRTG*GWTPPL
Trigger: CAGAGGTGGAGTCCATCCTCAACCAGTCCTTCTGCT...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACCCCGGTGTTTCCCAGTaGCCCTCTAACCCGTGTGAC +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYPGVSQ*PSNPCD
Trigger: GTCACACGGGTTAGAGGGTCACTGGGAAACACCGGG...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACTGTGCTCTGGCTGGTaGTGTCCCAATCGCCCTGCT +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTLCSGW*CPNRPA
Trigger: AGCAGGGCGATTGGGACATCACCAGCCAGAGCACAG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACGGAATGCCTGGAAGTaGTCCAGGACCTCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTRNAWK*SRTSGA
Trigger: TGCCCCTGAGGTCCTGGAGCACTTCCAGGCATTCCG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTATGGCACCTGACGCCTaGCGTGCTCACATACTCATA +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGMAPDA*RAHILI
Trigger: TATGAGTATGTGAGCACGGCAGGCGTCAGGTGCCAT...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTATCTCACGGTCCTCCTaGTTGAGTAGGAAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVISRSS*LSRKLR
Trigger: CCTCAGCTTCCTACTCAAGCAGGAGGACCGTGAGAT...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACACCCCATCTCGTCGCTaGCCAAGTAGGAGCTGTTAC +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNTPSRR*PSRSCY
Trigger: GTAACAGCTCCTACTTGGGCAGCGACGAGATGGGGT...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACGCGTTGATGTCCTGCTaGAAATCCTCCGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYALMSC*KSSAAW
Trigger: CCAGGCCGCGGAGGATTTGCAGCAGGACATCAACGC...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATGGCGGGAGGCTCGGATaGCAGATGCCGGGAGGGCTT +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHGGRLG*QMPGGL
Trigger: AAGCCCTCCCGGCATCTGGCATCCGAGCCTCCCGCC...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACATGCCCTCGTGTATGCTaGGGCAAGAGAGGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTCPRVC*GKRGKR
Trigger: GCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCA...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGGCAGCTCCACGAATCTaGAAGCACAGTGTGTCCGGC +
Preference number: 4 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLAAPRI*KHSVSG
Trigger: GCCGGACACACTGTGCTTCCAGATTCGTGGAGCTGC...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACACTGGCTCGTGCTTCCTaGGCATCCTCATGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTLARAS*ASSWVW
Trigger: CCACACCCATGAGGATGCCCAGGAAGCACGAGCCAG...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGCCATCATGGAGACCCTaGCCTTGGGGATCACCCTCT +
Preference number: 4 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLPSWRP*PWGSPS
Trigger: AGAGGGTGATCCCCAAGGCCAGGGTCTCCATGATGG...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGGTTCCTCCTTCACTGTaGCTGGCGAGAGCAGGGACT +
Preference number: 4 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLVPPSL*LARAGT
Trigger: AGTCCCTGCTCTCGCCAGCCACAGTGAAGGAGGAAC...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGAGAAGACGTTGGTGTTaGCCACATAGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRRRRWC*PHSSRP
Trigger: TGGACGAGAACTATGTGGCCAACACCAACGTCTTCT...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGTGTGGTAGAAGACGTTaGTGTTGGCCACATAGTTCT +
Preference number: 4 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPCGRRR*CWPHSS
Trigger: AGAACTATGTGGCCAACACCAACGTCTTCTACCACA...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGCACCAGGCTTTGGGTaGACAAAGGACTTCATGAGG +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGAPGFG*TKDFMR
Trigger: CCTCATGAAGTCCTTTGTCCACCCAAAGCCTGGTGC...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGGAAGAAGGCATTGCAAGGAGGAAGGATTTGGGGTGCAGTGTTTTATTTCTTAGGGCTCAGGCAAGGCTaGGGGAGGGGCTACCTGTCC +
Preference number: 4 (lower is better)
Translates to: GKKALQGGRIWGAVFYFLGLRQG*GRGYLS
Trigger: GGACAGGTAGCCCCTCCCCCAGCCTTGCCTGAGCCC...TAAGAAATAAAACACTGCACCCCAAATCCTTCCTCCTTGCAATGCCTTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000620554.1
CDS-3UTR TCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTCTTCCAGCCGTTGGTaGCGGTATAGCCGTTGCTAT +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNSSSRW*RYSRCY
Trigger: ATAGCAACGGCTATACCGTCACCAACGGCTGGAAGA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTTGTTCTCCACCAGCTTaGAGTCGTTGCGAAGCTGTT +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVCSPPA*SRCEAV
Trigger: AACAGCTTCGCAACGACTTCAAGCTGGTGGAGAACA...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCCAATCGCCCTGCTCTaGGAAGTTACCATCAAGAAA +
Preference number: 4 (lower is better)
Translates to: QALVASHSKRASSNTGQPPIALL*EVTIKK
Trigger: TTTCTTGATGGTAACTTCTCAGAGCAGGGCGATTGG...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAAGAAGATCGCGTCTCTaGGCAGCTGCAGCTCCGTGT +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTRRSRL*AAAAPC
Trigger: ACACGGAGCTGCAGCTGCGCAGAGACGCGATCTTCT...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCACAGTGTGTCCGGCTaGTCGGGGATTTTGATGATC +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNHSVSG*SGILMI
Trigger: GATCATCAAAATCCCCGACCAGCCGGACACACTGTG...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTTTGATGGAGTCCACCTaGTTAAAGAGGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVLMEST*LKRCSR
Trigger: CCTGGAGCACCTCTTTAACCAGGTGGACTCCATCAA...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAGCCCGGCTCATGACTaGCCCCTTGAGGAGAGCATT +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYSPAHD*PLEESI
Trigger: AATGCTCTCCTCAAGGGGCCAGTCATGAGCCGGGCT...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTACACGTGTGGTCACCTaGAATGTGGACGTTGAAGGA +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGTRVVT*NVDVEG
Trigger: TCCTTCAACGTCCACATTCCAGGTGACCACACGTGT...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCATCTTCCACATATCTCTaGATGTTGTCCACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPSSTYL*MLSTRV
Trigger: GACCCTGGTGGACAACATTCAGAGATATGTGGAAGA...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTCAGGGAGCCCCCACCTaGACTCACCACCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLQGAPT*THHLPG
Trigger: CCCTGGCAGGTGGTGAGTTCAGGTGGGGGCTCCCTG...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACATTCTGCCGGATGCGATaGAGGAATGCCGACTGCAAG +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTFCRMR*RNADCK
Trigger: CTTGCAGTCGGCATTCCTGCATCGCATCCGGCAGAA...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTCTTTCTCATGGTTGCTaGAATACTCCTCGTACACGC +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVLSHGC*NTPRTR
Trigger: GCGTGTACGAGGAGTATTGCAGCAACCATGAGAAAG...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGAGGCAACGAACTCATTaGCAAGAAAGCACTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVRQRTH*QESTWG
Trigger: TCCCCAAGTGCTTTCTTGGCAATGAGTTCGTTGCCT...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGTCATTCTTGAACTGGTaGTTGTCGGAAACATGGTGG +
Preference number: 4 (lower is better)
Translates to: QALVASHSKRASSNTGQPSFLNW*LSETWW
Trigger: CCACCATGTTTCCGACAAGCACCAGTTCAAGAATGA...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACATTGGGGATCACCCTCTaGAGCAGGCAAGCACTTCCA +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTLGITL*SRQALP
Trigger: TGGAAGTGCTTGCCTGCTGCAGAGGGTGATCCCCAA...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTTCTCCAACAGGGCTTaGCCCAAGTTGACTCCTTCT +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNFSNRA*PKLTPS
Trigger: AGAAGGAGTCAACTTGGGCCAAGCCCTGTTGGAGAA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp ACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTGATGGGGCGGATCAGCAGCCTGTTGATCTaGGTGACATATTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: TKDFMRRQSSSRALMGRISSLLI*VTYCFI
Trigger: GATGAAGCAATATGTCACCCAGATCAACAGGCTGCT...GATCCGCCCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTGGCGAGAGCAGGGACTaGCAGTGCAGCAGGACGCCC +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLGESRD*QCSRTP
Trigger: GGGCGTCCTGCTGCACTGCCAGTCCCTGCTCTCGCC...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTAGAAGACGTTGGTGTTaGCCACATAGTTCTCGTCCA +
Preference number: 4 (lower is better)
Translates to: VTQRERVLTPANRWRMEGRRRWC*PHSSRP
Trigger: TGGACGAGAACTATGTGGCCAACACCAACGTCTTCT...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAATGGGGCGGATCAGCTaGTCTATCTTTACCGCCGTG +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTMGRIS*SIFTAV
Trigger: CACGGCGGTAAAGATAGACCAGCTGATCCGCCCCAT...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACATGGGGCGGATCAGCTaGTCTATCTTTACCGCCGTG +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYMGRIS*SIFTAV
Trigger: CACGGCGGTAAAGATAGACCAGCTGATCCGCCCCAT...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCCCTTGCAGGAGGAGCTaGGTGCAGATGTCTGTGAGG +
Preference number: 4 (lower is better)
Translates to: ISCHINKVRANLVPRAGGPCRRS*VQMSVR
Trigger: CCTCACAGACATCTGCACTCAGCTCCTCCTGCAAGG...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTCTTCCACATATCTCTaGATGTTGTCCACCAGGGTC +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNSSTYL*MLSTRV
Trigger: GACCCTGGTGGACAACATTCAGAGATATGTGGAAGA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGTGGTGTCACAGATGTTaGGGAACTCAAAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLWCHRC*GTQSGA
Trigger: TGCCCCACTTTGAGTTCCGCAACATCTGTGACACCA...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTCAACCCGTGGCTCCGTaGCAAGATGGCCGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLQPVAP*QDGRLL
Trigger: GAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTG...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTTTAAAGTAAACCAGTaGACAATGCGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNFKVNQ*TMRWPW
Trigger: CCAGGGCCAGCGCATTGTGCACTGGTTTACTTTAAA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACATTCTTGGCCGTGTTGTaGATCTTCCAGCCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTFLAVL*IFQPLV
Trigger: CACCAACGGCTGGAAGATCCACAACACGGCCAAGAA...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACTCTCCTCTGCCGTCTTaGCCATGCAGACAAACCACT +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYSPLPS*PCRQTT
Trigger: AGTGGTTTGTCTGCATGGCCAAGACGGCAGAGGAGA...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTTGCTCATTCTTGAACTaGTGCTTGTCGGAAACATGG +
Preference number: 4 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVCSFLN*CLSETW
Trigger: CCATGTTTCCGACAAGCACCAGTTCAAGAATGAGCA...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp TCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTGGGGGAACTCTTGTAAGCTGTaGTTCATAGGGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: SKRASSNTGQPLENGGWGNSCKL*FIGKCL
Trigger: CAAGCATTTCCCTATGAACCACAGCTTACAAGAGTT...CCCCCACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAAAGGCCAGGAGCAGCTaGTTCTTCCCATCTTCCACA +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTKARSS*FFPSST
Trigger: TGTGGAAGATGGGAAGAACCAGCTGCTCCTGGCCTT...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCCTATCTTTACCGCCGTaGTGCTGGCATCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: ISCHINKVRANLVPRAGGLSLPP*CWHPWA
Trigger: TGCCCACGGATGCCAGCACCACGGCGGTAAAGATAG...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTCTCCAGCTCCAACCCTaGCTGGCCACCTCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLLQLQP*LATSQA
Trigger: GGCCTGAGAGGTGGCCAGCCAGGGTTGGAGCTGGAG...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATGGGCTTGGCCCAAGTTaGCTCCTTCTTCCGTCTTGC +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHGLGPS*LLLPSC
Trigger: GCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCC...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATGCTGTGACCTTTCCCTaGAGGCATACCGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHAVTFP*RHTEAG
Trigger: CCCAGCTTCGGTATGCCTTCAGGGAAAGGTCACAGC...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATAGCACTTGGGGACAGTaGTCAGCTTTCTCCGGCGGT +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHSTWGQ*SAFSGG
Trigger: ACCGCCGGAGAAAGCTGAGCACTGTCCCCAAGTGCT...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR GCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACATGGTGTCACAGATGTTaGGGAACTCAAAGTGGGGCA +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTWCHRC*GTQSGA
Trigger: TGCCCCACTTTGAGTTCCGCAACATCTGTGACACCA...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTCAGGCGTGTGAAGAATaGGCCGGCCCAGGGCCAATC +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLQACEE*AGPGPI
Trigger: GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTG...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATTCCATGACGTTCCCTTaGGTTCTGGGGACGCAGGAG +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHSMTFP*VLGTQE
Trigger: CTCCTGCGTCCCCAGAACCCAAGGGAACGTCATGGA...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTGAGCAGCCATGGTGGTaGTGCAGTGCTGGGTGTACG +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLEQPWW*CSAGCT
Trigger: CGTACACCCAGCACTGCATCACCACCATGGCTGCTC...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTTGTCGAGGTAGAAGATaGCCTTCAGCGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLCRGRR*PSAPAG
Trigger: GCCGGCAGGCGCTGAAGGTCATCTTCTACCTCGACA...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAACTTCTGGCAGGCGTGTaGAGAATGGGCCGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQLLAGV*RMGRPR
Trigger: CCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAG...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCGGACCGAGTCTCGATTaGTGTTACACTCGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: ISCHINKVRANLVPRAGGGPSLD*CYTRCR
Trigger: CCTACAGCGAGTGTAACAGCAATCGAGACTCGGTCC...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAAGGCTGGCGTCGCGGCTaGTCTCCTCGTACTCGCCAT +
Preference number: 4 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQGWRRG*SPRTRH
Trigger: ATGGCGAGTACGAGGAGAGCAGCCGCGACGCCAGCC...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATCAGAATCTCCACCCTTaGGCCCTGCTTCCGCATGAT +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHQNLHP*ALLPHD
Trigger: ATCATGCGGAAGCAGGGCCCAAGGGTGGAGATTCTG...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTGCTCCCGGGAAGCACTaGCTTGTAGGTCTTCAGGTG +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLAPGKH*LVGLQV
Trigger: CACCTGAAGACCTACAAGTCAGTGCTTCCCGGGAGC...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR TCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTGCTGTGACCTTTCCCTaGAGGCATACCGAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLAVTFP*RHTEAG
Trigger: CCCAGCTTCGGTATGCCTTCAGGGAAAGGTCACAGC...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACTGGTTCATAGGGAAATaGTTGGTCTCTTCGAAAGCC +
Preference number: 4 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYWFIGK*LVSSKA
Trigger: GGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCA...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTGCAGCTCCGTGTCTGTaGACTTCAGCAAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLAAPCL*TSARPG
Trigger: TCCTGGCCTTGCTGAAGTGCACAGACACGGAGCTGC...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATAAGAAGGCCCTTTCCTaGATGTTGCCCGCAGAGATC +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHKKALS*MLPAEI
Trigger: GATCTCTGCGGGCAACATCCAGGAAAGGGCCTTCTT...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCCTCTTCTCCAGCACGTaGTGCATGAAGCCATTGTTG +
Preference number: 4 (lower is better)
Translates to: ISCHINKVRANLVPRAGGLFSST*CMKPLL
Trigger: CAACAATGGCTTCATGCACCACGTGCTGGAGAAGAG...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCAGCAGCACCAGGCTTTaGGTGGACAAAGGACTTCAT +
Preference number: 4 (lower is better)
Translates to: ISCHINKVRANLVPRAGGSSTRL*VDKGLH
Trigger: ATGAAGTCCTTTGTCCACCCAAAGCCTGGTGCTGCT...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTGCATCCAGCCACTTCTaGTTCTCCTCTGCCGTCTTG +
Preference number: 4 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLASSHF*FSSAVL
Trigger: CAAGACGGCAGAGGAGAAGCAGAAGTGGCTGGATGC...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGAATACTACCTTCTGTTaGTCCCCTGTTAGACAACAT +
Preference number: 4 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLNTTFC*SPVRQH
Trigger: ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATT...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAAATACTACCTTCTGTTaGTCCCCTGTTAGACAACAT +
Preference number: 4 (lower is better)
Translates to: EWRVGEGITVDTSKRHLTNTTFC*SPVRQH
Trigger: ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATT...TGTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR TCA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAAAGCAGAAGGACTGGTTaGGGATGGACTCCACCTCTG +
Preference number: 4 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQSRRTG*GWTPPL
Trigger: CAGAGGTGGAGTCCATCCTCAACCAGTCCTTCTGCT...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATTTGTCGGAAACATGGTaGATGATGCCATTCTCCAAC +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHLSETW*MMPFSN
Trigger: GTTGGAGAATGGCATCATCCACCATGTTTCCGACAA...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATAGCAGCCTGTTGATCTaGGTGACATATTGCTTCATC +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHSSLLI*VTYCFI
Trigger: GATGAAGCAATATGTCACCCAGATCAACAGGCTGCT...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAACACAGTGTGTCCGGCTaGTCGGGGATTTTGATGATC +
Preference number: 4 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQHSVSG*SGILMI
Trigger: GATCATCAAAATCCCCGACCAGCCGGACACACTGTG...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR GCA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAAGAAGCTGTTTGTTCTTaGTGCTGGTCCCCTCCATCT +
Preference number: 4 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQEAVCS*CWSPPS
Trigger: AGATGGAGGGGACCAGCAGCAAGAACAAACAGCTTC...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CCA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAATTGATGGAGTCCACCTaGTTAAAGAGGTGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQLMEST*LKRCSR
Trigger: CCTGGAGCACCTCTTTAACCAGGTGGACTCCATCAA...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATAACTCTTGTAAGCTGTaGTTCATAGGGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHNSCKL*FIGKCL
Trigger: CAAGCATTTCCCTATGAACCACAGCTTACAAGAGTT...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CCA 90 bp GGGAAGAAGGCATTGCAAGGAGGAAGGATTTGGGGTGCAGTGTTTTATTTCTTAACAAAATTCAGACAGTaGTTACTTCTAGGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: GKKALQGGRIWGAVFYFLTKFRQ*LLLGGR
Trigger: TCTTCCCCCTAGAAGTAACCACTGTCTGAATTTTGT...TAAGAAATAAAACACTGCACCCCAAATCCTTCCTCCTTGCAATGCCTTCTTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000620554.1
CDS CCA 90 bp CTGTGGCTGGCGAGAGCAGGGACTGGCAGTGCAGCAGGACGCCCGTaGCCGCCACCTGCTCCAGCCACTTGCGGCTGGCGTCGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: LWLARAGTGSAAGRP*PPPAPATCGWRRGC
Trigger: GCAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGGTGGCGGCCACGGGCGTCCTGCTGCACTGCCAGTCCCTGCTCTCGCCAGCCACAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTGTGTGCTTGGTGGCCTaGGCCCGGCCCCCGTGGTCC +
Preference number: 5 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVVCLVA*ARPPWS
Trigger: GGACCACGGGGGCCGGGCCAAGGCCACCAAGCACAC...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS GCA 90 bp GAGAGCAGGGACTGGCAGTGCAGCAGGACGCCCGTGGCCGCCACCTaGTCCAGCCACTTGCGGCTGGCGTCGCGGCTGCTCTCCTCGTAC +
Preference number: 5 (lower is better)
Translates to: ESRDWQCSRTPVAAT*SSHLRLASRLLSSY
Trigger: GTACGAGGAGAGCAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGGTGGCGGCCACGGGCGTCCTGCTGCACTGCCAGTCCCTGCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCGTGCCCAAGATCTCGTaGAGGACGCAGAGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GREDAGQVPERAAAEALGVPKIS*RTQRRR
Trigger: CCTCCGCCTCTGCGTCCTCAACGAGATCTTGGGCAC...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGGGGTGGTCTGGGTGCTaGCCGGGAGTCCTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQGWSGC*PGVLLA
Trigger: GGCCAAGAGGACTCCCGGCAAGCACCCAGACCACCC...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 90 bp AGCGCAAGGTGCCCACGTAGTCCCTCTCGGTGCCCAAGATCTCGTTaGGGACGCAGAGGCGGAGGCGCAGCTGGCGCTCGGACTCCCGGG +
Preference number: 5 (lower is better)
Translates to: SARCPRSPSRCPRSR*GRRGGGAAGARTPG
Trigger: CCCGGGAGTCCGAGCGCCAGCTGCGCCTCCGCCTCTGCGTCCTCAACGAGATCTTGGGCACCGAGAGGGACTACGTGGGCACCTTGCGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAGGGTCTTGATGGAGTaGGGGAGGTTCCAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLERVLME*GRFQGS
Trigger: GGACCCCTGGAACCTCCCCAACTCCATCAAGACCCT...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCTGGGGCATCTGGTCCTaGACTCGCAGGTTTTTGGCC +
Preference number: 5 (lower is better)
Translates to: GREDAGQVPERAAAEALGWGIWS*TRRFLA
Trigger: GGCCAAAAACCTGCGAGTCAAGGACCAGATGCCCCA...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp CCGTGGCCGCCACCTGCTCCAGCCACTTGCGGCTGGCGTCGCGGCTaGTCTCCTCGTACTCGCCATTGTTGTTGTAGCGGTAGCCCAGGG +
Preference number: 5 (lower is better)
Translates to: PWPPPAPATCGWRRG*SPRTRHCCCSGSPG
Trigger: CCCTGGGCTACCGCTACAACAACAATGGCGAGTACGAGGAGAGCAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGGTGGCGGCCACGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGAAGGCCTCGAGGATCTaGGCGGTGAGGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQKASRI*AVRPKQ
Trigger: CTGCTTCGGCCTCACCGCCAAGATCCTCGAGGCCTT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp TGTTGTAGCGGTAGCCCAGGGCCGCCAGCAGCTGCTTGGAGAAGGTaGACACGGCGGCCACCAGGGCCTGGCAGAAGATCGCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: CCSGSPGPPAAAWRR*TRRPPGPGRRSRLC
Trigger: GCAGAGACGCGATCTTCTGCCAGGCCCTGGTGGCCGCCGTGTGCACCTTCTCCAAGCAGCTGCTGGCGGCCCTGGGCTACCGCTACAACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp CAGCCTGGTCTTCCTCCTGGGCCTGCTCGCCACTGGGGTCCTCAGTaGAGGCCTCCTGACTGGCTCGTGCTTCCTGGGCATCCTCATGGG +
Preference number: 5 (lower is better)
Translates to: QPGLPPGPARHWGPQ*RPPDWLVLPGHPHG
Trigger: CCCATGAGGATGCCCAGGAAGCACGAGCCAGTCAGGAGGCCTCCACTGAGGACCCCAGTGGCGAGCAGGCCCAGGAGGAAGACCAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp GCCAGCAGCTGCTTGGAGAAGGTGCACACGGCGGCCACCAGGGCCTaGCAGAAGATCGCGTCTCTGCGCAGCTGCAGCTCCGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: ASSCLEKVHTAATRA*QKIASLRSCSSVSV
Trigger: CACAGACACGGAGCTGCAGCTGCGCAGAGACGCGATCTTCTGCCAGGCCCTGGTGGCCGCCGTGTGCACCTTCTCCAAGCAGCTGCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTCGCACGGTAGGGATCTaGTTCAGCTCCACCAGCAGC +
Preference number: 5 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVRTVGI*FSSTSS
Trigger: GCTGCTGGTGGAGCTGAACAAGATCCCTACCGTGCG...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCATGGATTTGGTCCTCTaGGTGGACTTCTTGCTCCCG +
Preference number: 5 (lower is better)
Translates to: GREDAGQVPERAAAEALGMDLVL*VDFLLP
Trigger: CGGGAGCAAGAAGTCCACCAAGAGGACCAAATCCAT...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGGGGTTCAGGTGGCCTaGCTCCGGGTCAAGGCCGAT +
Preference number: 5 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGGVQVA*LRVKAD
Trigger: ATCGGCCTTGACCCGGAGCAAGGCCACCTGAACCCC...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCACCTGCTCCAGCCACTaGCGGCTGGCGTCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSTCSSH*RLASRL
Trigger: CAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGGT...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTAGCTCATCCAGGGCATaGATGGGGCGGATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVSSSRA*MGRISW
Trigger: CCAGCTGATCCGCCCCATCAATGCCCTGGATGAGCT...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp AGGTGCACACGGCGGCCACCAGGGCCTGGCAGAAGATCGCGTCTCTaGGCAGCTGCAGCTCCGTGTCTGTGCACTTCAGCAAGGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RCTRRPPGPGRRSRL*AAAAPCLCTSARPG
Trigger: TCCTGGCCTTGCTGAAGTGCACAGACACGGAGCTGCAGCTGCGCAGAGACGCGATCTTCTGCCAGGCCCTGGTGGCCGCCGTGTGCACCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp CGCCATTGTTGTTGTAGCGGTAGCCCAGGGCCGCCAGCAGCTGCTTaGAGAAGGTGCACACGGCGGCCACCAGGGCCTGGCAGAAGATCG +
Preference number: 5 (lower is better)
Translates to: RHCCCSGSPGPPAAA*RRCTRRPPGPGRRS
Trigger: CGATCTTCTGCCAGGCCCTGGTGGCCGCCGTGTGCACCTTCTCCAAGCAGCTGCTGGCGGCCCTGGGCTACCGCTACAACAACAATGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp TCCAGGGACTGCGCGTTGATGTCCTGCTGCAAATCCTCCGCGGCCTaGCTGCCTGGAGAAGGCAGCCCCTCCACGTTCTCCAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: SRDCALMSCCKSSAA*LPGEGSPSTFSSTG
Trigger: CCCAGTGCTGGAGAACGTGGAGGGGCTGCCTTCTCCAGGCAGCCAGGCCGCGGAGGATTTGCAGCAGGACATCAACGCGCAGTCCCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CAA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGAGAAGGTGACATaGTCCAGCTCTGACAGCGTC +
Preference number: 5 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLEKEKVT*SSSDSV
Trigger: GACGCTGTCAGAGCTGGACAATGTCACCTTCTCCTT...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GGCAGGGAGGACGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCTTGACTCGCAGGTTTTaGGCCAGAATCTCCACCCTT +
Preference number: 5 (lower is better)
Translates to: GREDAGQVPERAAAEALGLTRRF*ARISTL
Trigger: AAGGGTGGAGATTCTGGCCAAAAACCTGCGAGTCAA...GCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCGTCCTCCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp TGGCCACCAGGAGGCGCAGAGGGCGGCGGGAGCAGAAGGACTGGTTaGGGATGGACTCCACCTCTGAAAACGGCCGCAGGAACACCAGGT +
Preference number: 5 (lower is better)
Translates to: WPPGGAEGGGSRRTG*GWTPPLKTAAGTPG
Trigger: ACCTGGTGTTCCTGCGGCCGTTTTCAGAGGTGGAGTCCATCCTCAACCAGTCCTTCTGCTCCCGCCGCCCTCTGCGCCTCCTGGTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 90 bp GTGGTGCATGAAGCCATTGTTGCACAGACCCACGCCGAGCGCCACTaGCTCCTCCCGAGTCTGGCAGTCTCCCTGAGCCAGCAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: VVHEAIVAQTHAERH*LLPSLAVSLSQQPV
Trigger: GACTGGCTGCTGGCTCAGGGAGACTGCCAGACTCGGGAGGAGGCAGTGGCGCTCGGCGTGGGTCTGTGCAACAATGGCTTCATGCACCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp AACGGTCTTCATGGCCTGCAGGGCACTCTGGACCGCGGGGTGGTCTaGGTGCTTGCCGGGAGTCCTCTTGGCCAGCTCCTTAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: NGLHGLQGTLDRGVV*VLAGSPLGQLLKEE
Trigger: CTCCTCCTTAAGGAGCTGGCCAAGAGGACTCCCGGCAAGCACCCAGACCACCCCGCGGTCCAGAGTGCCCTGCAGGCCATGAAGACCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp TTCGTGGCCACCAGGAGGCGCAGAGGGCGGCGGGAGCAGAAGGACTaGTTGAGGATGGACTCCACCTCTGAAAACGGCCGCAGGAACACC +
Preference number: 5 (lower is better)
Translates to: FVATRRRRGRREQKD*LRMDSTSENGRRNT
Trigger: GGTGTTCCTGCGGCCGTTTTCAGAGGTGGAGTCCATCCTCAACCAGTCCTTCTGCTCCCGCCGCCCTCTGCGCCTCCTGGTGGCCACGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp CCTGGGCCTGCTCGCCACTGGGGTCCTCAGTGGAGGCCTCCTGACTaGCTCGTGCTTCCTGGGCATCCTCATGGGTGTGGTAGATCCACT +
Preference number: 5 (lower is better)
Translates to: PGPARHWGPQWRPPD*LVLPGHPHGCGRST
Trigger: AGTGGATCTACCACACCCATGAGGATGCCCAGGAAGCACGAGCCAGTCAGGAGGCCTCCACTGAGGACCCCAGTGGCGAGCAGGCCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGCAGATGTCTGTGAGGTaGGAACCCTCCCAGCCTTCG +
Preference number: 5 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGQMSVR*EPSQPS
Trigger: CGAAGGCTGGGAGGGTTCCAACCTCACAGACATCTG...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCCAGGTGCACGTaGTCCACAGTCAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGCSRCT*STVRVT
Trigger: GGTCACCCTGACTGTGGACAACGTGCACCTGGAACA...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGACGAAGACGCTGTCATaGGCAGCAAAGGCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGTKTLS*AAKASR
Trigger: CCTCGAGGCCTTTGCTGCCAATGACAGCGTCTTCGT...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCGGGGTTCAGGTGGCCTaGCTCCGGGTCAAGGCCGAT +
Preference number: 5 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFGVQVA*LRVKAD
Trigger: ATCGGCCTTGACCCGGAGCAAGGCCACCTGAACCCC...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CGCTGGGCAGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGGATCTGGGTGACATATaGCTTCATCTCCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: RWAGPGTGGCGSLGPSLEDLGDI*LHLLQG
Trigger: GCCCTGAAGGAGATGAAGCAATATGTCACCCAGATC...CTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCTGCCCAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTTCCTCCTCGGCCACCTaGAAGCACACCTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVSSSAT*KHTFLM
Trigger: CATCAAGAAGGTGTGCTTCAAGGTGGCCGAGGAGGA...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTCTCATGACTGGCCCCTaGAGGAGAGCATTGATGGAG +
Preference number: 5 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVLMTGP*RRALME
Trigger: CTCCATCAATGCTCTCCTCAAGGGGCCAGTCATGAG...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTTTGTCCACCAGGGTCTaGATGGAGTTGGGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVLSTRV*MELGRF
Trigger: GAACCTCCCCAACTCCATCAAGACCCTGGTGGACAA...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTCCAGGGACTGCGCGTaGATGTCCTGCTGCAAATCC +
Preference number: 5 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLSRDCA*MSCCKS
Trigger: GGATTTGCAGCAGGACATCAACGCGCAGTCCCTGGA...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp TACAGGCCCAGGGCCTCTTCGCGCCGACTCCGGAATGCCTGGAAGTaGTCCAGGACCTCAGGGGCACCATCGTTCATCACGTTGCTGCCA +
Preference number: 5 (lower is better)
Translates to: YRPRASSRRLRNAWK*SRTSGAPSFITLLP
Trigger: TGGCAGCAACGTGATGAACGATGGTGCCCCTGAGGTCCTGGAGCACTTCCAGGCATTCCGGAGTCGGCGCGAAGAGGCCCTGGGCCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp GATCCACTGGTACAGGCCCAGGGCCTCTTCGCGCCGACTCCGGAATaGCTGGAAGTGCTCCAGGACCTCAGGGGCACCATCGTTCATCAC +
Preference number: 5 (lower is better)
Translates to: DPLVQAQGLFAPTPE*LEVLQDLRGTIVHH
Trigger: GTGATGAACGATGGTGCCCCTGAGGTCCTGGAGCACTTCCAGGCATTCCGGAGTCGGCGCGAAGAGGCCCTGGGCCTGTACCAGTGGATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp CACTGGTACAGGCCCAGGGCCTCTTCGCGCCGACTCCGGAATGCCTaGAAGTGCTCCAGGACCTCAGGGGCACCATCGTTCATCACGTTG +
Preference number: 5 (lower is better)
Translates to: HWYRPRASSRRLRNA*KCSRTSGAPSFITL
Trigger: CAACGTGATGAACGATGGTGCCCCTGAGGTCCTGGAGCACTTCCAGGCATTCCGGAGTCGGCGCGAAGAGGCCCTGGGCCTGTACCAGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp TCCAGGGACTGCGCGTTGATGTCCTGCTGCAAATCCTCCGCGGCCTaGCTGCCTGGAGAAGGCAGCCCCTCCACGTTCTCCAGCACTTTC +
Preference number: 5 (lower is better)
Translates to: SRDCALMSCCKSSAA*LPGEGSPSTFSSTF
Trigger: GAAAGTGCTGGAGAACGTGGAGGGGCTGCCTTCTCCAGGCAGCCAGGCCGCGGAGGATTTGCAGCAGGACATCAACGCGCAGTCCCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCTTGCCGGGAGTCCTCTaGGCCAGCTCCTTAAGGAGG +
Preference number: 5 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGLPGVL*ASSLRR
Trigger: CCTCCTTAAGGAGCTGGCCAAGAGGACTCCCGGCAA...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CAGGCGGAGCCATCCCGAGGGAGCCGGGTGGCCCCATGTGGCCTCCATGACGTTGGCTGGTCGGGGATTTaGATGATCTCTTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: QAEPSRGSRVAPCGLHDVGWSGI*MISLAF
Trigger: GAAGGCCAAAGAGATCATCAAAATCCCCGACCAGCC...AACGTCATGGAGGCCACATGGGGCCACCCGGCTCCCTCGGGATGGCTCCGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGCCAATGCTCTCCAGCTaGGTGTCACAGATGTTGCGG +
Preference number: 5 (lower is better)
Translates to: LPALVYAAAREGSAPWRAPMLSS*VSQMLR
Trigger: CCGCAACATCTGTGACACCAAGCTGGAGAGCATTGG...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGAGGTTGATGTGGCAATaGGTGGGGCAGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: LPALVYAAAREGSAPWRARLMWQ*VGQKSR
Trigger: CCTGGACTTCTGCCCCACCAATTGCCACATCAACCT...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGCTCATGACTGGCCCCTaGAGGAGAGCATTGATGGAG +
Preference number: 5 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGLMTGP*RRALME
Trigger: CTCCATCAATGCTCTCCTCAAGGGGCCAGTCATGAG...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ACAAAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATTGATGGGGCGGATCCGAGGGTGGCCAGGCTaGTCCCGGAAGGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: TKDFMRRQSSSRALMGRIRGWPG*SRKEAG
Trigger: CCCTGCCTCCTTCCGGGACAAGCCTGGCCACCCTCG...GATCCGCCCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTTTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CAA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCATGGGAGCCGGTGTGCTaGGTGGCCTTGGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPWEPVC*VALARP
Trigger: GGGCCGGGCCAAGGCCACCAAGCACACCGGCTCCCA...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS TCA 90 bp TCACGGTCCTCCTGCTTGAGTAGGAAGCTGAGGCCCCGGTCTTCCTaGCCAAGGGTCCCACTGGCTGGCCCGAAGCTGCCATCATGGAGA +
Preference number: 5 (lower is better)
Translates to: SRSSCLSRKLRPRSS*PRVPLAGPKLPSWR
Trigger: TCTCCATGATGGCAGCTTCGGGCCAGCCAGTGGGACCCTTGGTCAGGAAGACCGGGGCCTCAGCTTCCTACTCAAGCAGGAGGACCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp TGCCGCTTGGTCTCATTGATGTTGGAGCAAACGGTCTTCATGGCCTaGAGGGCACTCTGGACCGCGGGGTGGTCTGGGTGCTTGCCGGGA +
Preference number: 5 (lower is better)
Translates to: CRLVSLMLEQTVFMA*RALWTAGWSGCLPG
Trigger: TCCCGGCAAGCACCCAGACCACCCCGCGGTCCAGAGTGCCCTGCAGGCCATGAAGACCGTTTGCTCCAACATCAATGAGACCAAGCGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 90 bp CTGCTCGCCACTGGGGTCCTCAGTGGAGGCCTCCTGACTGGCTCGTaGTTCCTGGGCATCCTCATGGGTGTGGTAGATCCACTGGTACAG +
Preference number: 5 (lower is better)
Translates to: LLATGVLSGGLLTGS*FLGILMGVVDPLVQ
Trigger: CTGTACCAGTGGATCTACCACACCCATGAGGATGCCCAGGAAGCACGAGCCAGTCAGGAGGCCTCCACTGAGGACCCCAGTGGCGAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp GCAGGCAAGCACTTCCAGGAGGGAGCAGCCATGGTGGTGATGCAGTaGTGGGTGTACGACATGGGGTTCAGGTGGCCTTGCTCCGGGTCA +
Preference number: 5 (lower is better)
Translates to: AGKHFQEGAAMVVMQ*WVYDMGFRWPCSGS
Trigger: TGACCCGGAGCAAGGCCACCTGAACCCCATGTCGTACACCCAGCACTGCATCACCACCATGGCTGCTCCCTCCTGGAAGTGCTTGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp CCCGAAGCTGCCATCATGGAGACCCTGGCCTTGGGGATCACCCTCTaGAGCAGGCAAGCACTTCCAGGAGGGAGCAGCCATGGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: PEAAIMETLALGITL*SRQALPGGSSHGGD
Trigger: ATCACCACCATGGCTGCTCCCTCCTGGAAGTGCTTGCCTGCTGCAGAGGGTGATCCCCAAGGCCAGGGTCTCCATGATGGCAGCTTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp TGCAGCCATGGCCTCAGAGCCTCTCCCCACAGCATAGACGTACGGTaGGGCAGCTCCACGAATCTGGAAGCACAGTGTGTCCGGCTGGTC +
Preference number: 5 (lower is better)
Translates to: CSHGLRASPHSIDVR*GSSTNLEAQCVRLV
Trigger: GACCAGCCGGACACACTGTGCTTCCAGATTCGTGGAGCTGCCCCACCGTACGTCTATGCTGTGGGGAGAGGCTCTGAGGCCATGGCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp GGCAAGCACTTCCAGGAGGGAGCAGCCATGGTGGTGATGCAGTGCTaGGTGTACGACATGGGGTTCAGGTGGCCTTGCTCCGGGTCAAGG +
Preference number: 5 (lower is better)
Translates to: GKHFQEGAAMVVMQC*VYDMGFRWPCSGSR
Trigger: CCTTGACCCGGAGCAAGGCCACCTGAACCCCATGTCGTACACCCAGCACTGCATCACCACCATGGCTGCTCCCTCCTGGAAGTGCTTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp CTGCGCGTTGATGTCCTGCTGCAAATCCTCCGCGGCCTGGCTGCCTaGAGAAGGCAGCCCCTCCACGTTCTCCAGCACTTTCGTGAACAG +
Preference number: 5 (lower is better)
Translates to: LRVDVLLQILRGLAA*RRQPLHVLQHFREQ
Trigger: CTGTTCACGAAAGTGCTGGAGAACGTGGAGGGGCTGCCTTCTCCAGGCAGCCAGGCCGCGGAGGATTTGCAGCAGGACATCAACGCGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CTGGCCCTGGGCCCTCCCCCATTTCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTGAGCCGTTGATGGATTaGGTCCTCTTGGTGGACTTC +
Preference number: 5 (lower is better)
Translates to: LALGPPPFPAAGLKRVLLEPLMD*VLLVDF
Trigger: GAAGTCCACCAAGAGGACCAAATCCATCAACGGCTC...AAGGAGGACCCGCTTTAGCCCTGCTGCGGGAAATGGGGGAGGGCCCAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CCTCCTCCCCAGCAGGCAGGGTGGCTTCCTGTGCTCTGGCTGGTGATGTCCCAATGCATGAAGCCATTGTaGCACAGACCCACGCCGAGC +
Preference number: 5 (lower is better)
Translates to: PPPQQAGWLPVLWLVMSQCMKPL*HRPTPS
Trigger: GCTCGGCGTGGGTCTGTGCAACAATGGCTTCATGCA...TTGGGACATCACCAGCCAGAGCACAGGAAGCCACCCTGCCTGCTGGGGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCCGAAGCTGTTTGTTCTaGCTGCTGGTCCCCTCCATC +
Preference number: 5 (lower is better)
Translates to: HPSSFWQACEEWAGPGPIRSCLF*LLVPSI
Trigger: GATGGAGGGGACCAGCAGCAAGAACAAACAGCTTCG...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCTCGTTGCGAAGCTGTTaGTTCTTGCTGCTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: HPSSFWQACEEWAGPGPISLRSC*FLLLVP
Trigger: GGGGACCAGCAGCAAGAACAAACAGCTTCGCAACGA...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GCTGCCTGCTGTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGTTCACCACCACAGCCTaGTTCTTCTCCTCGATGTCA +
Preference number: 5 (lower is better)
Translates to: AACCVLPNPSSRGRGPAWFTTTA*FFSSMS
Trigger: TGACATCGAGGAGAAGAACAAGGCTGTGGTGGTGAA...CCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACACAGCAGGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp ATGATGCACTTGGGCAGCAACCCGTGGCTCCGTGCCAAGATGGCCGCCTGCTCCTGTTCCAGGTGCACGTaGTCCACAGTCAGGGTGACC +
Preference number: 5 (lower is better)
Translates to: MMHLGSNPWLRAKMAACSCSRCT*STVRVT
Trigger: GGTCACCCTGACTGTGGACAACGTGCACCTGGAACA...GGAGCAGGCGGCCATCTTGGCACGGAGCCACGGGTTGCTGCCCAAGTGCATCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CAA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGTTGAAGCACACCTTCTaGATGCCCCCATGGTCACTC +
Preference number: 5 (lower is better)
Translates to: LPALVYAAAREGSAPWRALKHTF*MPPWSL
Trigger: GAGTGACCATGGGGGCATCAAGAAGGTGTGCTTCAA...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCTCCTCCTCGGCCACCTaGAAGCACACCTTCTTGATG +
Preference number: 5 (lower is better)
Translates to: HPSSFWQACEEWAGPGPISSSAT*KHTFLM
Trigger: CATCAAGAAGGTGTGCTTCAAGGTGGCCGAGGAGGA...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCAGGGTCTTGATGGAGTaGGGGAGGTTCCAGGGGTCC +
Preference number: 5 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSRVLME*GRFQGS
Trigger: GGACCCCTGGAACCTCCCCAACTCCATCAAGACCCT...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGAGCCGGCCTGCATGATGCACTaGGGCAGCAACCCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: VEGNRGFKSAGGAIPREPACMMH*GSNPWL
Trigger: GAGCCACGGGTTGCTGCCCAAGTGCATCATGCAGGC...CGGCTCCCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTGTCCTCCCAAATCCCAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGCCTGGAATGTGGACGTaGAAGGAAACCGGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: VSSQIPAPEAAAQRGAFGPGMWT*KETGVS
Trigger: TGAAACCCCGGTTTCCTTCAACGTCCACATTCCAGG...CCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTGGGATTTGGGAGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp CCTCTGCAGCAGGCAAGCACTTCCAGGAGGGAGCAGCCATGGTGGTaGTGCAGTGCTGGGTGTACGACATGGGGTTCAGGTGGCCTTGCT +
Preference number: 5 (lower is better)
Translates to: PLQQASTSRREQPWW*CSAGCTTWGSGGLA
Trigger: AGCAAGGCCACCTGAACCCCATGTCGTACACCCAGCACTGCATCACCACCATGGCTGCTCCCTCCTGGAAGTGCTTGCCTGCTGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCTGCCGCTTGGTCTCATaGATGTTGGAGCAAACGGTC +
Preference number: 5 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGCRLVS*MLEQTV
Trigger: GACCGTTTGCTCCAACATCAATGAGACCAAGCGGCA...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCGATTTTGATGATCTCTTaGGCCTTCGTGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: LPALVYAAAREGSAPWRAILMIS*AFVATR
Trigger: CCTGGTGGCCACGAAGGCCAAAGAGATCATCAAAAT...CGCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGCTCCAGAGGCCGCGGCCCAGCGTGGGGCATTTGGGTGTTCAGAGGTCCCCACCATCGTTCATCACGTaGCTGCCATTGACCTTCAGA +
Preference number: 5 (lower is better)
Translates to: QLQRPRPSVGHLGVQRSPPSFIT*LPLTFR
Trigger: TCTGAAGGTCAATGGCAGCAACGTGATGAACGATGG...TGGGGACCTCTGAACACCCAAATGCCCCACGCTGGGCCGCGGCCTCTGGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482556.5
CDS-3UTR CAA 90 bp CACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCCCAGGGCCAATCTTGAAGCACACCTTCTaGATGCCCCCATGGTCACTC +
Preference number: 5 (lower is better)
Translates to: HPSSFWQACEEWAGPGPILKHTF*MPPWSL
Trigger: GAGTGACCATGGGGGCATCAAGAAGGTGTGCTTCAA...GATTGGCCCTGGGCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCCCAGCGTGGGGCATTaGGGTGTTCAGAGGTCCCCA +
Preference number: 5 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFPSVGH*GVQRSP
Trigger: TGGGGACCTCTGAACACCCAAATGCCCCACGCTGGG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGAGGGTGGCCAGGCTaGTCCCGGAAGGAGGCAGGG +
Preference number: 5 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNRGWPG*SRKEAG
Trigger: CCCTGCCTCCTTCCGGGACAAGCCTGGCCACCCTCG...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp CGAGAACAGGACCTTGACATTCTCCTCCGTGAGGCCCTTCTCCACTaGGTCGGCCACGTTCTGCCGGATGCGATGCAGGAATGCCGACTG +
Preference number: 5 (lower is better)
Translates to: REQDLDILLREALLH*VGHVLPDAMQECRL
Trigger: CAGTCGGCATTCCTGCATCGCATCCGGCAGAACGTGGCCGACTCAGTGGAGAAGGGCCTCACGGAGGAGAATGTCAAGGTCCTGTTCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 90 bp GGAACTCAAAGTGGGGCATGGTCACGATGGCGCTGCTCAGGGCCATaGGCCGCCTGCAGTTCTCCACGAAGACGCTGTCATTGGCAGCAA +
Preference number: 5 (lower is better)
Translates to: GTQSGAWSRWRCSGP*AACSSPRRRCHWQQ
Trigger: TTGCTGCCAATGACAGCGTCTTCGTGGAGAACTGCAGGCGGCTCATGGCCCTGAGCAGCGCCATCGTGACCATGCCCCACTTTGAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp GGCGGGAGGGCAGCTTGGAGAAGTGGTAGCTGTCGAGGTAGAAGATaGCCTTCAGCGCCTGCCGGCTGCCCTCAATGTGGTAGAAGACGT +
Preference number: 5 (lower is better)
Translates to: GGRAAWRSGSCRGRR*PSAPAGCPQCGRRR
Trigger: ACGTCTTCTACCACATTGAGGGCAGCCGGCAGGCGCTGAAGGTCATCTTCTACCTCGACAGCTACCACTTCTCCAAGCTGCCCTCCCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp ACATTCTCCTCCGTGAGGCCCTTCTCCACTGAGTCGGCCACGTTCTaGCGGATGCGATGCAGGAATGCCGACTGCAAGAAGCGCAAGGTG +
Preference number: 5 (lower is better)
Translates to: TFSSVRPFSTESATF*RMRCRNADCKKRKV
Trigger: CACCTTGCGCTTCTTGCAGTCGGCATTCCTGCATCGCATCCGGCAGAACGTGGCCGACTCAGTGGAGAAGGGCCTCACGGAGGAGAATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp CCAATGCTCTCCAGCTTGGTGTCACAGATGTTGCGGAACTCAAAGTaGGGCATGGTCACGATGGCGCTGCTCAGGGCCATGAGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: PMLSSLVSQMLRNSK*GMVTMALLRAMSRL
Trigger: CAGGCGGCTCATGGCCCTGAGCAGCGCCATCGTGACCATGCCCCACTTTGAGTTCCGCAACATCTGTGACACCAAGCTGGAGAGCATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp TGGTCCTCCTCGGCCACCTTGAAGCACACCTTCTTGATGCCCCCATaGTCACTCCTGTCCATCTCGCTCTCTTCACTGACCAGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: WSSSATLKHTFLMPP*SLLSISLSSLTRGR
Trigger: CCTGCCCCTGGTCAGTGAAGAGAGCGAGATGGACAGGAGTGACCATGGGGGCATCAAGAAGGTGTGCTTCAAGGTGGCCGAGGAGGACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGACAAACCACTTATTCTaGGCCGTGTTGTGGATCTTC +
Preference number: 5 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQTNHLF*AVLWIF
Trigger: GAAGATCCACAACACGGCCAAGAATAAGTGGTTTGT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp ACTGCCTGCCCTCGTGTATGCTGCGGCAAGAGAGGGAAGCGCACCCTGGAGGGCTTGCCAAGAAAGCACTaGGGGACAGTGCTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: TACPRVCCGKRGKRTLEGLPRKH*GTVLSF
Trigger: AAAGCTGAGCACTGTCCCCAAGTGCTTTCTTGGCAA...GCCCTCCAGGGTGCGCTTCCCTCTCTTGCCGCAGCATACACGAGGGCAGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 90 bp TGGACTCCACCTCTGAAAACGGCCGCAGGAACACCAGGTCCTCATTaGTGGAGTAGATCTTCCTCCCCACCTGCAGGCCAGCCACCTCAG +
Preference number: 5 (lower is better)
Translates to: WTPPLKTAAGTPGPH*WSRSSSPPAGQPPQ
Trigger: CTGAGGTGGCTGGCCTGCAGGTGGGGAGGAAGATCTACTCCATCAATGAGGACCTGGTGTTCCTGCGGCCGTTTTCAGAGGTGGAGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 90 bp GCACCATCGTTCATCACGTTGCTGCCATTGACCTTCAGAATGCACTaGCCAGCACAGAGCCCTGCAGCCATGGCCTCAGAGCCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: APSFITLLPLTFRMH*PAQSPAAMASEPLP
Trigger: GGGGAGAGGCTCTGAGGCCATGGCTGCAGGGCTCTGTGCTGGTCAGTGCATTCTGAAGGTCAATGGCAGCAACGTGATGAACGATGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp GCTCCAGGACCTCAGGGGCACCATCGTTCATCACGTTGCTGCCATTaGCCTTCAGAATGCACTGACCAGCACAGAGCCCTGCAGCCATGG +
Preference number: 5 (lower is better)
Translates to: APGPQGHHRSSRCCH*PSECTDQHRALQPW
Trigger: CCATGGCTGCAGGGCTCTGTGCTGGTCAGTGCATTCTGAAGGTCAATGGCAGCAACGTGATGAACGATGGTGCCCCTGAGGTCCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp CTCTCGCGCTGCTCCCGCTCGCGGATGATGGCATCCAGCCACTTCTaGTTCTCCTCTGCCGTCTTGGCCATGCAGACAAACCACTTATTC +
Preference number: 5 (lower is better)
Translates to: LSRCSRSRMMASSHF*FSSAVLAMQTNHLF
Trigger: GAATAAGTGGTTTGTCTGCATGGCCAAGACGGCAGAGGAGAAGCAGAAGTGGCTGGATGCCATCATCCGCGAGCGGGAGCAGCGCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp CTGCTTGTCAGATGGGATCCGCATGTCACAGGGCAGCTCATCTCCTaGCAGGAGGTAGAAGCAGCAGCCATCAGTCATTCCTGCCCCACC +
Preference number: 5 (lower is better)
Translates to: LLVRWDPHVTGQLIS*QEVEAAAISHSCPT
Trigger: GGTGGGGCAGGAATGACTGATGGCTGCTGCTTCTACCTCCTGCCAGGAGATGAGCTGCCCTGTGACATGCGGATCCCATCTGACAAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS-3UTR CAA 90 bp AGGTCCCGGAACGGGCGGCTGCGGAAGCCTTGGGCCATCCCTGGAGAAGGCCAGATGAGGTTCACCTTCTaGTTCATCATCATGTGGTAC +
Preference number: 5 (lower is better)
Translates to: RSRNGRLRKPWAIPGEGQMRFTF*FIIMWY
Trigger: GTACCACATGATGATGAACAAGAAGGTGAACCTCAT...CTGGCCTTCTCCAGGGATGGCCCAAGGCTTCCGCAGCCGCCCGTTCCGGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGAGCCAGTCCACCAGCTaGCTCCCGGGAAGCACTGAC +
Preference number: 5 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVSQSTS*LPGSTD
Trigger: GTCAGTGCTTCCCGGGAGCAAGCTGGTGGACTGGCT...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCACGAAGACGCTGTCATaGGCAGCAAAGGCCTCGAGG +
Preference number: 5 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFTKTLS*AAKASR
Trigger: CCTCGAGGCCTTTGCTGCCAATGACAGCGTCTTCGT...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCCGATGAGGGAGGGTTaGCGTCCAAAGCGGATGCTG +
Preference number: 5 (lower is better)
Translates to: QALVASHSKRASSNTGQPPMREG*RPKRML
Trigger: CAGCATCCGCTTTGGACGCAAACCCTCCCTCATCGG...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCGTGGACAGCAGCCTGTaGATCTGGGTGACATATTGC +
Preference number: 5 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFVDSSL*IWVTYC
Trigger: GCAATATGTCACCCAGATCAACAGGCTGCTGTCCAC...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCGGCTCCGGCCACGGATaGTACACTCTTCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFGSGHG*YTLLSV
Trigger: AACAGAAAGAAGAGTGTACAATCCGTGGCCGGAGCC...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCAAGGAGAAGGTGACATaGTCCAGCTCTGACAGCGTC +
Preference number: 5 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFKEKVT*SSSDSV
Trigger: GACGCTGTCAGAGCTGGACAATGTCACCTTCTCCTT...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTGGGGCATCTGGTCCTaGACTCGCAGGTTTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFWGIWS*TRRFLA
Trigger: GGCCAAAAACCTGCGAGTCAAGGACCAGATGCCCCA...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTCCATGACGTTCCCTaGGGTTCTGGGGACGCAGGA +
Preference number: 5 (lower is better)
Translates to: QALVASHSKRASSNTGQPLHDVP*GSGDAG
Trigger: TCCTGCGTCCCCAGAACCCAAGGGAACGTCATGGAG...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp GGGGCAGGATCAGCAGGCGCTTGGCCAGAATGTTCTCCACCAGCTTaGAGTCGTTGCGAAGCTGTTTGTTCTTGCTGCTGGTCCCCTCCA +
Preference number: 5 (lower is better)
Translates to: GAGSAGAWPECSPPA*SRCEAVCSCCWSPP
Trigger: TGGAGGGGACCAGCAGCAAGAACAAACAGCTTCGCAACGACTTCAAGCTGGTGGAGAACATTCTGGCCAAGCGCCTGCTGATCCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 90 bp AGGCAATCCTCTGGCCAATGCTCTCCAGCTTGGTGTCACAGATGTTaGGGAACTCAAAGTGGGGCATGGTCACGATGGCGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: RQSSGQCSPAWCHRC*GTQSGAWSRWRCSG
Trigger: CCCTGAGCAGCGCCATCGTGACCATGCCCCACTTTGAGTTCCGCAACATCTGTGACACCAAGCTGGAGAGCATTGGCCAGAGGATTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp TCCTCTGGATCGGAGACAACAGGTAGCCTTCCAAAGGGATGTCCGTaGTCTTCCGGCCTCCCAGAAGCATGCAGCTCAAAAGGAAGGCGC +
Preference number: 5 (lower is better)
Translates to: SSGSETTGSLPKGCP*SSGLPEACSSKGRR
Trigger: GCGCCTTCCTTTTGAGCTGCATGCTTCTGGGAGGCCGGAAGACCACGGACATCCCTTTGGAAGGCTACCTGTTGTCTCCGATCCAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp TCCACCAGGGTCTTGATGGAGTTGGGGAGGTTCCAGGGGTCCTCCTaGATGCTAATCTGGATCAGGCTCCGGCCACGGATTGTACACTCT +
Preference number: 5 (lower is better)
Translates to: STRVLMELGRFQGSS*MLIWIRLRPRIVHS
Trigger: AGAGTGTACAATCCGTGGCCGGAGCCTGATCCAGATTAGCATCCAGGAGGACCCCTGGAACCTCCCCAACTCCATCAAGACCCTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCTCCATGACTTCAGTGTaGATTCGACCCCTGAAGATG +
Preference number: 5 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGSMTSV*IRPLKM
Trigger: CATCTTCAGGGGTCGAATCAACACTGAAGTCATGGA...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCATGTTCTCCACCAGCTaGAAGTCGTTGCGAAGCTGT +
Preference number: 5 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFMFSTS*KSLRSC
Trigger: ACAGCTTCGCAACGACTTCAAGCTGGTGGAGAACAT...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCCCATCGTTCATCACGTaGCTGCCATTGACCTTCAGA +
Preference number: 5 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSPSFIT*LPLTFR
Trigger: TCTGAAGGTCAATGGCAGCAACGTGATGAACGATGG...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACGCCTGCATGATGCACTaGGGCAGCAACCCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNACMMH*GSNPWL
Trigger: GAGCCACGGGTTGCTGCCCAAGTGCATCATGCAGGC...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCACTCCATGACGTTCCCTaGGGTTCTGGGGACGCAGGA +
Preference number: 5 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPLHDVP*GSGDAG
Trigger: TCCTGCGTCCCCAGAACCCAAGGGAACGTCATGGAG...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ATGGGTCTCCAGCACCCCTCCAGCTTCTGGCAGGCGTGTGAAGAATGGGCCGGCAAAGCGGGTCCTCCTTaGTCTCTGATGCAAGATACA +
Preference number: 5 (lower is better)
Translates to: MGLQHPSSFWQACEEWAGKAGPP*SLMQDT
Trigger: TGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTT...GCCGGCCCATTCTTCACACGCCTGCCAGAAGCTGGAGGGGTGCTGGAGACCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp GTTACACTCGCTGTAGGAGTCGCGATAACTCATGGTGTCGTGGCCTaGGTCCTCCTGGTCCTCCTCGGCCACCTTGAAGCACACCTTCTT +
Preference number: 5 (lower is better)
Translates to: VTLAVGVAITHGVVA*VLLVLLGHLEAHLL
Trigger: AAGAAGGTGTGCTTCAAGGTGGCCGAGGAGGACCAGGAGGACTCAGGCCACGACACCATGAGTTATCGCGACTCCTACAGCGAGTGTAAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp CTCCCGCTCGCGGATGATGGCATCCAGCCACTTCTGCTTCTCCTCTaGCGTCTTGGCCATGCAGACAAACCACTTATTCTTGGCCGTGTT +
Preference number: 5 (lower is better)
Translates to: LPLADDGIQPLLLLL*RLGHADKPLILGRV
Trigger: AACACGGCCAAGAATAAGTGGTTTGTCTGCATGGCCAAGACGGCAGAGGAGAAGCAGAAGTGGCTGGATGCCATCATCCGCGAGCGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp AAAGAGGTGCTCCAGGCAGCCATGAAGCTTGTCCTGCTTGTCAGATaGGATCCGCATGTCACAGGGCAGCTCATCTCCAGACCCCATCTC +
Preference number: 5 (lower is better)
Translates to: KEVLQAAMKLVLLVR*DPHVTGQLISRPHL
Trigger: GAGATGGGGTCTGGAGATGAGCTGCCCTGTGACATGCGGATCCCATCTGACAAGCAGGACAAGCTTCATGGCTGCCTGGAGCACCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp AAAGAGGTGCTCCAGGCAGCCATGAAGCTTGTCCTGCTTGTCAGATaGGATCCGCATGTCACAGGGCAGCTCATCTCCTGGCAGGAGGTA +
Preference number: 5 (lower is better)
Translates to: KEVLQAAMKLVLLVR*DPHVTGQLISWQEV
Trigger: TACCTCCTGCCAGGAGATGAGCTGCCCTGTGACATGCGGATCCCATCTGACAAGCAGGACAAGCTTCATGGCTGCCTGGAGCACCTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS-3UTR CAA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTTCGAGAACAGGACCTaGACATTCTCCTCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFFENRT*TFSSVR
Trigger: CCTCACGGAGGAGAATGTCAAGGTCCTGTTCTCGAA...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp TCCCGCAGCAGGGCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGCTCTTGGTGGACTTCTaGCTCCCGGTGACCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SRSRAKAGPPLSLMQDTVLLVDF*LPVTLD
Trigger: ATCCAGGGTCACCGGGAGCAAGAAGTCCACCAAGAG...CACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGCCCTGCTGCGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CTGGCTGGCCACCTCTCAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCCAGGCAACGAACTCATaGCCAAGAAAGCACTTGGGG +
Preference number: 5 (lower is better)
Translates to: LAGHLSGPCSQSLKESEFQATNS*PRKHLG
Trigger: CCCCAAGTGCTTTCTTGGCAATGAGTTCGTTGCCTG...GAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTGAGAGGTGGCCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGGCTGGTCGGGGATTTaGATGATCTCTTTGGCCTTC +
Preference number: 5 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRGWSGI*MISLAF
Trigger: GAAGGCCAAAGAGATCATCAAAATCCCCGACCAGCC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCACCTGCTCCAGCCACTaGCGGCTGGCGTCGCGGCTG +
Preference number: 5 (lower is better)
Translates to: ISCHINKVRANLVPRAGGTCSSH*RLASRL
Trigger: CAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGGT...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp TGTTCATCATCATGTGGTACAGCTTCTCCCCCTTCTCCGCAATCATaGCGTAGGCATCACGCTCCATGCCCAGCTTCAGGCTCTCGCGCT +
Preference number: 5 (lower is better)
Translates to: CSSSCGTASPPSPQS*RRHHAPCPASGSRA
Trigger: AGCGCGAGAGCCTGAAGCTGGGCATGGAGCGTGATGCCTACGTCATGATTGCGGAGAAGGGGGAGAAGCTGTACCACATGATGATGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 90 bp GCATTGATGGAGTCCACCTGGTTAAAGAGGTGCTCCAGGCAGCCATaGAGCTTGTCCTGCTTGTCAGATGGGATCCGCATGTCACAGGGC +
Preference number: 5 (lower is better)
Translates to: ALMESTWLKRCSRQP*SLSCLSDGIRMSQG
Trigger: GCCCTGTGACATGCGGATCCCATCTGACAAGCAGGACAAGCTTCATGGCTGCCTGGAGCACCTCTTTAACCAGGTGGACTCCATCAATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371941.4
ENST00000482556.5
ENST00000496915.1
CDS GCA 90 bp GGACTGGCTATCCCCTCACCTTGTAAGCTGTGGTTCATAGGGAAATaGTTGGTCTCTTCGAAAGCCCGGCTCATGACTGGCCCCTTGAGG +
Preference number: 5 (lower is better)
Translates to: GLAIPSPCKLWFIGK*LVSSKARLMTGPLR
Trigger: CCTCAAGGGGCCAGTCATGAGCCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCACAGCTTACAAGGTGAGGGGATAGCCAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS CCA 90 bp ACCCCATCTCGTCGCTGCCCAAGTAGGAGCTGTTACTTCTCACGCTaGTGTAGGACAGGACCGAGTCTCGATTGCTGTTACACTCGCTGT +
Preference number: 5 (lower is better)
Translates to: TPSRRCPSRSCYFSR*CRTGPSLDCCYTRC
Trigger: ACAGCGAGTGTAACAGCAATCGAGACTCGGTCCTGTCCTACACCAGCGTGAGAAGTAACAGCTCCTACTTGGGCAGCGACGAGATGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTGTTTCCCAGTGACCCTCTAACCCGTGTGACACGGCACCTCAGGTGGGGCTCCTTGGTCTCATTGATGTaGGAGCAAACGGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: VFPSDPLTRVTRHLRWGSLVSLM*EQTVFM
Trigger: CATGAAGACCGTTTGCTCCAACATCAATGAGACCAA...GGAGCCCCACCTGAGGTGCCGTGTCACACGGGTTAGAGGGTCACTGGGAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGGCCCTTTCCTGGATGTaGCCCGCAGAGATCTTTAAC +
Preference number: 5 (lower is better)
Translates to: QALVASHSKRASSNTGQPALSWM*PAEIFN
Trigger: GTTAAAGATCTCTGCGGGCAACATCCAGGAAAGGGC...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp AGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACCGGGGTTTTCTCCTCTGCCGTCTaGGCCATGCAGACAAACCAC +
Preference number: 5 (lower is better)
Translates to: RRRHVWSPGMWTLKETGVFSSAV*AMQTNH
Trigger: GTGGTTTGTCTGCATGGCCAAGACGGCAGAGGAGAA...AACCCCGGTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAAGGGCTTGGCCCAAGTaGACTCCTTCTTCCGTCTTG +
Preference number: 5 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPRAWPK*TPSSVL
Trigger: CAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCT...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAGACCCTGCTCTTCAGTaGGGCTGCAAACTCCTGGTA +
Preference number: 5 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPDPALQ*GCKLLV
Trigger: TACCAGGAGTTTGCAGCCCAACTGAAGAGCAGGGTC...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGGATCTGGGTGACATATaGCTTCATCTCCTTCAGGGC +
Preference number: 5 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRDLGDI*LHLLQG
Trigger: GCCCTGAAGGAGATGAAGCAATATGTCACCCAGATC...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGGGCTCCGGCCACGGATaGTACACTCTTCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: QALVASHSKRASSNTGQPGSGHG*YTLLSV
Trigger: AACAGAAAGAAGAGTGTACAATCCGTGGCCGGAGCC...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTCCAGGGACTGCGCGTaGATGTCCTGCTGCAAATCC +
Preference number: 5 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNSRDCA*MSCCKS
Trigger: GGATTTGCAGCAGGACATCAACGCGCAGTCCCTGGA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp AGCTGTTTGTTCTTGCTGCTGGTCCCCTCCATCTCCTCGTCAGCATaGAAGCGGAAGTACTGGGACTCATCCCTGAACTCGCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: SCLFLLLVPSISSSA*KRKYWDSSLNSLFS
Trigger: GGAGAAGAGCGAGTTCAGGGATGAGTCCCAGTACTTCCGCTTTCATGCTGACGAGGAGATGGAGGGGACCAGCAGCAAGAACAAACAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 90 bp GTTCTCGTCCAGCTGCTTAAAGGAGAAGGTGACATTGTCCAGCTCTaGCAGCGTCACCCAGATGTCCTCCAGCATGGTCCGTTCCTCCTT +
Preference number: 5 (lower is better)
Translates to: VLVQLLKGEGDIVQL*QRHPDVLQHGPFLL
Trigger: AAGGAGGAACGGACCATGCTGGAGGACATCTGGGTGACGCTGTCAGAGCTGGACAATGTCACCTTCTCCTTTAAGCAGCTGGACGAGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp CAAACTCCTGGTAGCAGGCAATCCTCTGGCCAATGCTCTCCAGCTTaGTGTCACAGATGTTGCGGAACTCAAAGTGGGGCATGGTCACGA +
Preference number: 5 (lower is better)
Translates to: QTPGSRQSSGQCSPA*CHRCCGTQSGAWSR
Trigger: TCGTGACCATGCCCCACTTTGAGTTCCGCAACATCTGTGACACCAAGCTGGAGAGCATTGGCCAGAGGATTGCCTGCTACCAGGAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp GCAGGCTGTCACCTTGGACTGGCTATCCCCTCACCTTGTAAGCTGTaGTTCATAGGGAAATGCTTGGTCTCTTCGAAAGCCCGGCTCATG +
Preference number: 5 (lower is better)
Translates to: AGCHLGLAIPSPCKL*FIGKCLVSSKARLM
Trigger: CATGAGCCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCACAGCTTACAAGGTGAGGGGATAGCCAGTCCAAGGTGACAGCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS-3UTR CAA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGAGGAGGAGCGGGTACTaGCAGATCCTCTGGATCGGA +
Preference number: 5 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLRRSGY*QILWIG
Trigger: TCCGATCCAGAGGATCTGCAAGTACCCGCTCCTCCT...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTTTTCTCCGGCGGTCCTaGATGAGGTTCACCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VTQRERVLTPANRWRMEGFLRRS*MRFTFL
Trigger: CAAGAAGGTGAACCTCATCAAGGACCGCCGGAGAAA...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GCTAAAGCGGGTCCTCCTTTGTCTCTGATGCAAGATACAGTGACAAGGCCACTGTGGTGCATGAAGCCATaGTTGCACAGACCCACGCCG +
Preference number: 5 (lower is better)
Translates to: AKAGPPLSLMQDTVTRPLWCMKP*LHRPTP
Trigger: CGGCGTGGGTCTGTGCAACAATGGCTTCATGCACCA...CAGTGGCCTTGTCACTGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CAGGCCCTTGTAGCCAGTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGTTCATAGGGAAATGCTaGGTCTCTTCGAAAGCCCGG +
Preference number: 5 (lower is better)
Translates to: QALVASHSKRASSNTGQPFIGKC*VSSKAR
Trigger: CCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAA...CGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGACTGGCTACAAGGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACAGCTCATCCAGGGCATaGATGGGGCGGATCAGCTGG +
Preference number: 5 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYSSSRA*MGRISW
Trigger: CCAGCTGATCCGCCCCATCAATGCCCTGGATGAGCT...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp ATGTTGCCCGCAGAGATCTTTAACAAAGTCCCTTGCAGGAGGAGCTaGGTGCAGATGTCTGTGAGGTTGGAACCCTCCCAGCCTTCGATG +
Preference number: 5 (lower is better)
Translates to: MLPAEIFNKVPCRRS*VQMSVRLEPSQPSM
Trigger: CATCGAAGGCTGGGAGGGTTCCAACCTCACAGACATCTGCACTCAGCTCCTCCTGCAAGGGACTTTGTTAAAGATCTCTGCGGGCAACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GTCACTCAAAGAGAGCGAGTTCTAACACCGGCCAACCGCTGGAGAATGGAGGGTATTTTGATGATCTCTTaGGCCTTCGTGGCCACCAGG +
Preference number: 5 (lower is better)
Translates to: VTQRERVLTPANRWRMEGILMIS*AFVATR
Trigger: CCTGGTGGCCACGAAGGCCAAAGAGATCATCAAAAT...ACCCTCCATTCTCCAGCGGTTGGCCGGTGTTAGAACTCGCTCTCTTTGAGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCAAGGCCTCGAGGATCTaGGCGGTGAGGCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: ISCHINKVRANLVPRAGGKASRI*AVRPKQ
Trigger: CTGCTTCGGCCTCACCGCCAAGATCCTCGAGGCCTT...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACGACACTTCCATGAGGTaGATGTGGCAATTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNDTSMR*MWQLVG
Trigger: CCCCACCAATTGCCACATCAACCTCATGGAAGTGTC...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 90 bp AGACGAGAAGGTTGTCGAAGAGGAAGAAGGCCCTTTCCTGGATGTTaGCCGCAGAGATCTTTAACAAAGTCCCTTGCAGGAGGAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RREGCRRGRRPFPGC*PQRSLTKSLAGGAE
Trigger: CTCAGCTCCTCCTGCAAGGGACTTTGTTAAAGATCTCTGCGGGCAACATCCAGGAAAGGGCCTTCTTCCTCTTCGACAACCTTCTCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp GTTCATAGGGAAATGCTTGGTCTCTTCGAAAGCCCGGCTCATGACTaGCCCCTTGAGGAGAGCATTGATGGAGTCCACCTGGTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: VHREMLGLFESPAHD*PLEESIDGVHLVKE
Trigger: CTCTTTAACCAGGTGGACTCCATCAATGCTCTCCTCAAGGGGCCAGTCATGAGCCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371941.4
ENST00000482556.5
ENST00000496915.1
CDS CCA 90 bp TTGATGGAGTTGGGGAGGTTCCAGGGGTCCTCCTGGATGCTAATCTaGATCAGGCTCCGGCCACGGATTGTACACTCTTCTTTCTGTTTA +
Preference number: 5 (lower is better)
Translates to: LMELGRFQGSSWMLI*IRLRPRIVHSSFCL
Trigger: TAAACAGAAAGAAGAGTGTACAATCCGTGGCCGGAGCCTGATCCAGATTAGCATCCAGGAGGACCCCTGGAACCTCCCCAACTCCATCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GGCTCTCGGGGATCCTCTGGTAACAGGCGTGATGGAGGCCCCGTCTCTCCTTTCTCGTACACGCAGAACTaGTCCTTGAATTTTAAGAAA +
Preference number: 5 (lower is better)
Translates to: GSRGSSGNRRDGGPVSPFSYTQN*SLNFKK
Trigger: TTTCTTAAAATTCAAGGACAAGTTCTGCGTGTACGA...GAAAGGAGAGACGGGGCCTCCATCACGCCTGTTACCAGAGGATCCCCGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACTTATTCTTGGCCGTGTaGTGGATCTTCCAGCCGTTG +
Preference number: 5 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNLFLAV*WIFQPL
Trigger: CAACGGCTGGAAGATCCACAACACGGCCAAGAATAA...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GTGGACGTTGAAGGAAACCGGGGTTTCAAAAGTGCAGGCGGAGCCATCCCGAGGACTCCTTCTTCCGTCTaGCTGATTTCACCAATTTCT +
Preference number: 5 (lower is better)
Translates to: VDVEGNRGFKSAGGAIPRTPSSV*LISPIS
Trigger: AGAAATTGGTGAAATCAGCAAGACGGAAGAAGGAGT...CCTCGGGATGGCTCCGCCTGCACTTTTGAAACCCCGGTTTCCTTCAACGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCATTCTTGAACTGGTGCTaGTCGGAAACATGGTGGATG +
Preference number: 5 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPFLNWC*SETWWM
Trigger: CATCCACCATGTTTCCGACAAGCACCAGTTCAAGAA...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp CTTCCTGTGCTCTGGCTGGTGATGTCCCAATCGCCCTGCTCTGAGAAGTTACCAAAAGCGGGTCCTCCTTaGTCTCTGATGCAAGATACA +
Preference number: 5 (lower is better)
Translates to: LPVLWLVMSQSPCSEKLPKAGPP*SLMQDT
Trigger: TGTATCTTGCATCAGAGACAAAGGAGGACCCGCTTT...TGGTAACTTCTCAGAGCAGGGCGATTGGGACATCACCAGCCAGAGCACAGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 90 bp CAAACCACTTATTCTTGGCCGTGTTGTGGATCTTCCAGCCGTTGGTaGCGGTATAGCCGTTGCTATGGTAATCCGCTGTCCCATCTTCCA +
Preference number: 5 (lower is better)
Translates to: QTTYSWPCCGSSSRW*RYSRCYGNPLSHLP
Trigger: TGGAAGATGGGACAGCGGATTACCATAGCAACGGCTATACCGTCACCAACGGCTGGAAGATCCACAACACGGCCAAGAATAAGTGGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 90 bp GTAGGGATCTTGTTCAGCTCCACCAGCAGCCTCAGGGCTTTCTCATaGTTGCTGCAATACTCCTCGTACACGCAGAACTTGTCCTTGAAT +
Preference number: 5 (lower is better)
Translates to: VGILFSSTSSLRAFS*LLQYSSYTQNLSLN
Trigger: ATTCAAGGACAAGTTCTGCGTGTACGAGGAGTATTGCAGCAACCATGAGAAAGCCCTGAGGCTGCTGGTGGAGCTGAACAAGATCCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp GATGAGGAGGAGGAGACACGTGTGGTCACCTGGAATGTGGACGTTGAAGGAAACACCAGCTTGAAGTCGTaGCGAAGCTGTTTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: DEEEETRVVTWNVDVEGNTSLKS*RSCLFL
Trigger: CAAGAACAAACAGCTTCGCAACGACTTCAAGCTGGT...GTTTCCTTCAACGTCCACATTCCAGGTGACCACACGTGTCTCCTCCTCCTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACGACACTTCCATGAGGTaGATGTGGCAATTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYDTSMR*MWQLVG
Trigger: CCCCACCAATTGCCACATCAACCTCATGGAAGTGTC...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCCCAATGCTCTCCAGCTaGGTGTCACAGATGTTGCGG +
Preference number: 5 (lower is better)
Translates to: ISCHINKVRANLVPRAGGPMLSS*VSQMLR
Trigger: CCGCAACATCTGTGACACCAAGCTGGAGAGCATTGG...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAAAACTGCCGAGGGGGCTaGTGTGGGTCCCTCCTCCCC +
Preference number: 5 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQNCRGG*CGSLLP
Trigger: GGGGAGGAGGGACCCACACAAGCCCCCTCGGCAGTT...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 90 bp TGCTTGTCGGAAACATGGTGGATGATGCCATTCTCCAACAGGGCTTaGCCCAAGTTGACTCCTTCTTCCGTCTTGCTGATTTCACCAATT +
Preference number: 5 (lower is better)
Translates to: CLSETWWMMPFSNRA*PKLTPSSVLLISPI
Trigger: AATTGGTGAAATCAGCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCTGTTGGAGAATGGCATCATCCACCATGTTTCCGACAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp AGAATGGAGGGTGGGGGAAGGAATCACAGTCGATACCTCAAAACGACACCTTACATCACCTGCTCATTCTaGAACTGGTGCTTGTCGGAA +
Preference number: 5 (lower is better)
Translates to: RMEGGGRNHSRYLKTTPYITCSF*NWCLSE
Trigger: TTCCGACAAGCACCAGTTCAAGAATGAGCAGGTGAT...GTAAGGTGTCGTTTTGAGGTATCGACTGTGATTCCTTCCCCCACCCTCCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCTTGGTGTCACAGATGTaGCGGAACTCAAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: ISCHINKVRANLVPRAGGLVSQM*RNSKWG
Trigger: GCCCCACTTTGAGTTCCGCAACATCTGTGACACCAA...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATAGGTTGATGTGGCAATaGGTGGGGCAGAAGTCCAGG +
Preference number: 5 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHRLMWQ*VGQKSR
Trigger: CCTGGACTTCTGCCCCACCAATTGCCACATCAACCT...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTCCGATGAGGGAGGGTTaGCGTCCAAAGCGGATGCTG +
Preference number: 5 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLPMREG*RPKRML
Trigger: CAGCATCCGCTTTGGACGCAAACCCTCCCTCATCGG...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GAAGCAGGAACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATTTGTCCACCAGGGTCTaGATGGAGTTGGGGAGGTTC +
Preference number: 5 (lower is better)
Translates to: EAGTVVNTTFCWSPVRQHLSTRV*MELGRF
Trigger: GAACCTCCCCAACTCCATCAAGACCCTGGTGGACAA...ATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGTTCCTGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCAGGGCTTTCTCATGGTaGCTGCAATACTCCTCGTAC +
Preference number: 5 (lower is better)
Translates to: ISCHINKVRANLVPRAGGRAFSW*LQYSSY
Trigger: GTACGAGGAGTATTGCAGCAACCATGAGAAAGCCCT...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTAGGATCAGCAGGCGCTaGGCCAGAATGTTCTCCACC +
Preference number: 5 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLRISRR*ARMFST
Trigger: GGTGGAGAACATTCTGGCCAAGCGCCTGCTGATCCT...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS-3UTR CAA 90 bp ATTTCATGCCATATAAATAAAGTCAGAGCAAATCTCGTGCCCAGGGCTGGTGGCTTCATAGGGAAATGCTaGGTCTCTTCGAAAGCCCGG +
Preference number: 5 (lower is better)
Translates to: ISCHINKVRANLVPRAGGFIGKC*VSSKAR
Trigger: CCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAA...GCCACCAGCCCTGGGCACGAGATTTGCTCTGACTTTATTTATATGGCATGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp AGACAGTGGTTACTTCTAGGGGGAAGAAGGCATTGCAAGGAGGAAGGATTTGGGGCAAGGAGGAAGGATTaGGGGTGCAGTGTTTTATTT +
Preference number: 5 (lower is better)
Translates to: RQWLLLGGRRHCKEEGFGARRKD*GCSVLF
Trigger: AAATAAAACACTGCACCCCAAATCCTTCCTCCTTGC...CCCAAATCCTTCCTCCTTGCAATGCCTTCTTCCCCCTAGAAGTAACCACTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000620554.1
CDS-3UTR CAA 90 bp ATGATCATCACAAAATTCAGACAGTGGTTACTTCTAGGGGGAAGAAGGCATTGCAGGGGGAAGAAGGCATaGCAAGGAGGAAGGATTTGG +
Preference number: 5 (lower is better)
Translates to: MIITKFRQWLLLGGRRHCRGKKA*QGGRIW
Trigger: CCAAATCCTTCCTCCTTGCAATGCCTTCTTCCCCCT...GCAATGCCTTCTTCCCCCTAGAAGTAACCACTGTCTGAATTTTGTGATGATCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000620554.1
CDS-3UTR CAA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTTTGGTGTCACAGATGTaGCGGAACTCAAAGTGGGGC +
Preference number: 5 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLLVSQM*RNSKWG
Trigger: GCCCCACTTTGAGTTCCGCAACATCTGTGACACCAA...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp ACAGTTGTCAATACTACCTTCTGTTGGTCCCCTGTTAGACAACATACCTTTCTTTTGACTCGCAGGTTTTaGGCCAGAATCTCCACCCTT +
Preference number: 5 (lower is better)
Translates to: TVVNTTFCWSPVRQHTFLLTRRF*ARISTL
Trigger: AAGGGTGGAGATTCTGGCCAAAAACCTGCGAGTCAA...AAGAAAGGTATGTTGTCTAACAGGGGACCAACAGAAGGTAGTATTGACAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS-3UTR CAA 90 bp GTCGATACCTCAAAACGACACCTTACAACCCTAATATTAACAAACAGGAAACAACCTGGAATGTGGACGTaGAAGGAAACCGGGGTTTCA +
Preference number: 5 (lower is better)
Translates to: VDTSKRHLTTLILTNRKQPGMWT*KETGVS
Trigger: TGAAACCCCGGTTTCCTTCAACGTCCACATTCCAGG...TTGTTTCCTGTTTGTTAATATTAGGGTTGTAAGGTGTCGTTTTGAGGTATCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp GACTGGCAGTGCAGCAGGACGCCCGTGGCCGCCACCTaGTCCAGCCACTTGCGGCTGGCGTCGCGGCTGCTC +
Preference number: 6 (lower is better)
Translates to: DWQCSRTPVAAT*SSHLRLASRLL
Trigger: GAGCAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGGTGGCGGCCACGGGCGTCCTGCTGCACTGCCAGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp GCGAGAGCAGGGACTGGCAGTGCAGCAGGACGCCCGTaGCCGCCACCTGCTCCAGCCACTTGCGGCTGGCGT +
Preference number: 6 (lower is better)
Translates to: ARAGTGSAAGRP*PPPAPATCGWR
Trigger: ACGCCAGCCGCAAGTGGCTGGAGCAGGTGGCGGCCACGGGCGTCCTGCTGCACTGCCAGTCCCTGCTCTCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp CGCCCGTGGCCGCCACCTGCTCCAGCCACTTGCGGCTaGCGTCGCGGCTGCTCTCCTCGTACTCGCCATTGT +
Preference number: 6 (lower is better)
Translates to: RPWPPPAPATCG*RRGCSPRTRHC
Trigger: ACAATGGCGAGTACGAGGAGAGCAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGGTGGCGGCCACGGGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 72 bp TGCCCACGTAGTCCCTCTCGGTGCCCAAGATCTCGTTaGGGACGCAGAGGCGGAGGCGCAGCTGGCGCTCGG +
Preference number: 6 (lower is better)
Translates to: CPRSPSRCPRSR*GRRGGGAAGAR
Trigger: CCGAGCGCCAGCTGCGCCTCCGCCTCTGCGTCCTCAACGAGATCTTGGGCACCGAGAGGGACTACGTGGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp CATGGCCTGCAGGGCACTCTGGACCGCGGGGTGGTCTaGGTGCTTGCCGGGAGTCCTCTTGGCCAGCTCCTT +
Preference number: 6 (lower is better)
Translates to: HGLQGTLDRGVV*VLAGSPLGQLL
Trigger: AAGGAGCTGGCCAAGAGGACTCCCGGCAAGCACCCAGACCACCCCGCGGTCCAGAGTGCCCTGCAGGCCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 72 bp GCCTGCTCGCCACTGGGGTCCTCAGTGGAGGCCTCCTaGCTGGCTCGTGCTTCCTGGGCATCCTCATGGGTG +
Preference number: 6 (lower is better)
Translates to: ACSPLGSSVEAS*LARASWASSWV
Trigger: CACCCATGAGGATGCCCAGGAAGCACGAGCCAGTCAGGAGGCCTCCACTGAGGACCCCAGTGGCGAGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp CGGCGGCCACCAGGGCCTGGCAGAAGATCGCGTCTCTaGGCAGCTGCAGCTCCGTGTCTGTGCACTTCAGCA +
Preference number: 6 (lower is better)
Translates to: RRPPGPGRRSRL*AAAAPCLCTSA
Trigger: TGCTGAAGTGCACAGACACGGAGCTGCAGCTGCGCAGAGACGCGATCTTCTGCCAGGCCCTGGTGGCCGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp AGGCCCAGGGCCTCTTCGCGCCGACTCCGGAATGCCTaGAAGTGCTCCAGGACCTCAGGGGCACCATCGTTC +
Preference number: 6 (lower is better)
Translates to: RPRASSRRLRNA*KCSRTSGAPSF
Trigger: GAACGATGGTGCCCCTGAGGTCCTGGAGCACTTCCAGGCATTCCGGAGTCGGCGCGAAGAGGCCCTGGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp CTTCCTCCTGGGCCTGCTCGCCACTGGGGTCCTCAGTaGAGGCCTCCTGACTGGCTCGTGCTTCCTGGGCAT +
Preference number: 6 (lower is better)
Translates to: LPPGPARHWGPQ*RPPDWLVLPGH
Trigger: ATGCCCAGGAAGCACGAGCCAGTCAGGAGGCCTCCACTGAGGACCCCAGTGGCGAGCAGGCCCAGGAGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp GAGGCCCCGGTCTTCCTGACCAAGGGTCCCACTGGCTaGCCCGAAGCTGCCATCATGGAGACCCTGGCCTTG +
Preference number: 6 (lower is better)
Translates to: EAPVFLTKGPTG*PEAAIMETLAL
Trigger: CAAGGCCAGGGTCTCCATGATGGCAGCTTCGGGCCAGCCAGTGGGACCCTTGGTCAGGAAGACCGGGGCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp TGCTTGGAGAAGGTGCACACGGCGGCCACCAGGGCCTaGCAGAAGATCGCGTCTCTGCGCAGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: CLEKVHTAATRA*QKIASLRSCSS
Trigger: GGAGCTGCAGCTGCGCAGAGACGCGATCTTCTGCCAGGCCCTGGTGGCCGCCGTGTGCACCTTCTCCAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 72 bp TGCAGGGCACTCTGGACCGCGGGGTGGTCTGGGTGCTaGCCGGGAGTCCTCTTGGCCAGCTCCTTAAGGAGG +
Preference number: 6 (lower is better)
Translates to: CRALWTAGWSGC*PGVLLASSLRR
Trigger: CCTCCTTAAGGAGCTGGCCAAGAGGACTCCCGGCAAGCACCCAGACCACCCCGCGGTCCAGAGTGCCCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 90 bp GTGGCCACCAGGAGGCGCAGAGGGCGGCGGGAGCAGAAGGACTGGTaGAGGATGGACTCCACCTCTGAAAACGGCCGCAGGAACACCAGG +
Preference number: 6 (lower is better)
Translates to: VATRRRRGRREQKDW*RMDSTSENGRRNTR
Trigger: CCTGGTGTTCCTGCGGCCGTTTTCAGAGGTGGAGTCCATCCTCAACCAGTCCTTCTGCTCCCGCCGCCCTCTGCGCCTCCTGGTGGCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 72 bp GGAGGCGCAGAGGGCGGCGGGAGCAGAAGGACTGGTTaGGGATGGACTCCACCTCTGAAAACGGCCGCAGGA +
Preference number: 6 (lower is better)
Translates to: GGAEGGGSRRTG*GWTPPLKTAAG
Trigger: TCCTGCGGCCGTTTTCAGAGGTGGAGTCCATCCTCAACCAGTCCTTCTGCTCCCGCCGCCCTCTGCGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp GAAGCCATTGTTGCACAGACCCACGCCGAGCGCCACTaGCTCCTCCCGAGTCTGGCAGTCTCCCTGAGCCAG +
Preference number: 6 (lower is better)
Translates to: EAIVAQTHAERH*LLPSLAVSLSQ
Trigger: CTGGCTCAGGGAGACTGCCAGACTCGGGAGGAGGCAGTGGCGCTCGGCGTGGGTCTGTGCAACAATGGCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp TGCGCGTTGATGTCCTGCTGCAAATCCTCCGCGGCCTaGCTGCCTGGAGAAGGCAGCCCCTCCACGTTCTCC +
Preference number: 6 (lower is better)
Translates to: CALMSCCKSSAA*LPGEGSPSTFS
Trigger: GGAGAACGTGGAGGGGCTGCCTTCTCCAGGCAGCCAGGCCGCGGAGGATTTGCAGCAGGACATCAACGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 90 bp GGGTTCAGGTGGCCTTGCTCCGGGTCAAGGCCGATGAGGGAGGGTTaGCGTCCAAAGCGGATGCTGAAGGACCTGCCCACTGAGGGGGTG +
Preference number: 6 (lower is better)
Translates to: GFRWPCSGSRPMREG*RPKRMLKDLPTEGV
Trigger: CACCCCCTCAGTGGGCAGGTCCTTCAGCATCCGCTTTGGACGCAAACCCTCCCTCATCGGCCTTGACCCGGAGCAAGGCCACCTGAACCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp AGGGCCTCTTCGCGCCGACTCCGGAATGCCTGGAAGTaGTCCAGGACCTCAGGGGCACCATCGTTCATCACG +
Preference number: 6 (lower is better)
Translates to: RASSRRLRNAWK*SRTSGAPSFIT
Trigger: CGTGATGAACGATGGTGCCCCTGAGGTCCTGGAGCACTTCCAGGCATTCCGGAGTCGGCGCGAAGAGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp CCACCTGCTCCAGCCACTTGCGGCTGGCGTCGCGGCTaGTCTCCTCGTACTCGCCATTGTTGTTGTAGCGGT +
Preference number: 6 (lower is better)
Translates to: PPAPATCGWRRG*SPRTRHCCCSG
Trigger: ACCGCTACAACAACAATGGCGAGTACGAGGAGAGCAGCCGCGACGCCAGCCGCAAGTGGCTGGAGCAGGTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 90 bp CTCAGGGCCATGAGCCGCCTGCAGTTCTCCACGAAGACGCTGTCATaGGCAGCAAAGGCCTCGAGGATCTTGGCGGTGAGGCCGAAGCAG +
Preference number: 6 (lower is better)
Translates to: LRAMSRLQFSTKTLS*AAKASRILAVRPKQ
Trigger: CTGCTTCGGCCTCACCGCCAAGATCCTCGAGGCCTTTGCTGCCAATGACAGCGTCTTCGTGGAGAACTGCAGGCGGCTCATGGCCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 72 bp AGTGGGGCATGGTCACGATGGCGCTGCTCAGGGCCATaGGCCGCCTGCAGTTCTCCACGAAGACGCTGTCAT +
Preference number: 6 (lower is better)
Translates to: SGAWSRWRCSGP*AACSSPRRRCH
Trigger: ATGACAGCGTCTTCGTGGAGAACTGCAGGCGGCTCATGGCCCTGAGCAGCGCCATCGTGACCATGCCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp GGCCCTTCTCCACTGAGTCGGCCACGTTCTGCCGGATaGGATGCAGGAATGCCGACTGCAAGAAGCGCAAGG +
Preference number: 6 (lower is better)
Translates to: GPSPLSRPRSAG*DAGMPTARSAR
Trigger: CCTTGCGCTTCTTGCAGTCGGCATTCCTGCATCGCATCCGGCAGAACGTGGCCGACTCAGTGGAGAAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp GCCATCATGGAGACCCTGGCCTTGGGGATCACCCTCTaGAGCAGGCAAGCACTTCCAGGAGGGAGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: AIMETLALGITL*SRQALPGGSSH
Trigger: ATGGCTGCTCCCTCCTGGAAGTGCTTGCCTGCTGCAGAGGGTGATCCCCAAGGCCAGGGTCTCCATGATGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 72 bp TGGCCTTGCTCCGGGTCAAGGCCGATGAGGGAGGGTTaGCGTCCAAAGCGGATGCTGAAGGACCTGCCCACT +
Preference number: 6 (lower is better)
Translates to: WPCSGSRPMREG*RPKRMLKDLPT
Trigger: AGTGGGCAGGTCCTTCAGCATCCGCTTTGGACGCAAACCCTCCCTCATCGGCCTTGACCCGGAGCAAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp TCCGTGAGGCCCTTCTCCACTGAGTCGGCCACGTTCTaGCGGATGCGATGCAGGAATGCCGACTGCAAGAAG +
Preference number: 6 (lower is better)
Translates to: SVRPFSTESATF*RMRCRNADCKK
Trigger: CTTCTTGCAGTCGGCATTCCTGCATCGCATCCGGCAGAACGTGGCCGACTCAGTGGAGAAGGGCCTCACGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp GTCTCATTGATGTTGGAGCAAACGGTCTTCATGGCCTaGAGGGCACTCTGGACCGCGGGGTGGTCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: VSLMLEQTVFMA*RALWTAGWSGC
Trigger: GCACCCAGACCACCCCGCGGTCCAGAGTGCCCTGCAGGCCATGAAGACCGTTTGCTCCAACATCAATGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp AAGCAGCCGCGGGGCTCCACGATCTTCTCCAGCACATaGCACCTGACGCCTGCCGTGCTCACATACTCATAC +
Preference number: 6 (lower is better)
Translates to: KQPRGSTIFSST*HLTPAVLTYSY
Trigger: GTATGAGTATGTGAGCACGGCAGGCGTCAGGTGCCATGTGCTGGAGAAGATCGTGGAGCCCCGCGGCTGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp TTCCAGGAGGGAGCAGCCATGGTGGTGATGCAGTGCTaGGTGTACGACATGGGGTTCAGGTGGCCTTGCTCC +
Preference number: 6 (lower is better)
Translates to: FQEGAAMVVMQC*VYDMGFRWPCS
Trigger: GGAGCAAGGCCACCTGAACCCCATGTCGTACACCCAGCACTGCATCACCACCATGGCTGCTCCCTCCTGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp CCAGCTCTGACAGCGTCACCCAGATGTCCTCCAGCATaGTCCGTTCCTCCTTCACTGTGGCTGGCGAGAGCA +
Preference number: 6 (lower is better)
Translates to: PALTASPRCPPA*SVPPSLWLARA
Trigger: TGCTCTCGCCAGCCACAGTGAAGGAGGAACGGACCATGCTGGAGGACATCTGGGTGACGCTGTCAGAGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 72 bp AACTCGCTCTTCTCCAGCACGTGGTGCATGAAGCCATaGTTGCACAGACCCACGCCGAGCGCCACTGCCTCC +
Preference number: 6 (lower is better)
Translates to: NSLFSSTWCMKP*LHRPTPSATAS
Trigger: GGAGGCAGTGGCGCTCGGCGTGGGTCTGTGCAACAATGGCTTCATGCACCACGTGCTGGAGAAGAGCGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 90 bp CTCATGGTGTCGTGGCCTGAGTCCTCCTGGTCCTCCTCGGCCACCTaGAAGCACACCTTCTTGATGCCCCCATGGTCACTCCTGTCCATC +
Preference number: 6 (lower is better)
Translates to: LMVSWPESSWSSSAT*KHTFLMPPWSLLSI
Trigger: GATGGACAGGAGTGACCATGGGGGCATCAAGAAGGTGTGCTTCAAGGTGGCCGAGGAGGACCAGGAGGACTCAGGCCACGACACCATGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 72 bp GACCTTGACATTCTCCTCCGTGAGGCCCTTCTCCACTaGGTCGGCCACGTTCTGCCGGATGCGATGCAGGAA +
Preference number: 6 (lower is better)
Translates to: DLDILLREALLH*VGHVLPDAMQE
Trigger: TTCCTGCATCGCATCCGGCAGAACGTGGCCGACTCAGTGGAGAAGGGCCTCACGGAGGAGAATGTCAAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 72 bp CAGGCAAGCACTTCCAGGAGGGAGCAGCCATGGTGGTaGTGCAGTGCTGGGTGTACGACATGGGGTTCAGGT +
Preference number: 6 (lower is better)
Translates to: QASTSRREQPWW*CSAGCTTWGSG
Trigger: ACCTGAACCCCATGTCGTACACCCAGCACTGCATCACCACCATGGCTGCTCCCTCCTGGAAGTGCTTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp TGCGATGCAGGAATGCCGACTGCAAGAAGCGCAAGGTaGCCACGTAGTCCCTCTCGGTGCCCAAGATCTCGT +
Preference number: 6 (lower is better)
Translates to: CDAGMPTARSAR*PRSPSRCPRSR
Trigger: ACGAGATCTTGGGCACCGAGAGGGACTACGTGGGCACCTTGCGCTTCTTGCAGTCGGCATTCCTGCATCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp TGCTCCCGCTCGCGGATGATGGCATCCAGCCACTTCTaGTTCTCCTCTGCCGTCTTGGCCATGCAGACAAAC +
Preference number: 6 (lower is better)
Translates to: CSRSRMMASSHF*FSSAVLAMQTN
Trigger: GTTTGTCTGCATGGCCAAGACGGCAGAGGAGAAGCAGAAGTGGCTGGATGCCATCATCCGCGAGCGGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp ATGAGCCGCCTGCAGTTCTCCACGAAGACGCTGTCATaGGCAGCAAAGGCCTCGAGGATCTTGGCGGTGAGG +
Preference number: 6 (lower is better)
Translates to: MSRLQFSTKTLS*AAKASRILAVR
Trigger: CCTCACCGCCAAGATCCTCGAGGCCTTTGCTGCCAATGACAGCGTCTTCGTGGAGAACTGCAGGCGGCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 72 bp TCCTGGTCCTCCTCGGCCACCTTGAAGCACACCTTCTaGATGCCCCCATGGTCACTCCTGTCCATCTCGCTC +
Preference number: 6 (lower is better)
Translates to: SWSSSATLKHTF*MPPWSLLSISL
Trigger: GAGCGAGATGGACAGGAGTGACCATGGGGGCATCAAGAAGGTGTGCTTCAAGGTGGCCGAGGAGGACCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 90 bp CCTGAGTCCTCCTGGTCCTCCTCGGCCACCTTGAAGCACACCTTCTaGATGCCCCCATGGTCACTCCTGTCCATCTCGCTCTCTTCACTG +
Preference number: 6 (lower is better)
Translates to: PESSWSSSATLKHTF*MPPWSLLSISLSSL
Trigger: CAGTGAAGAGAGCGAGATGGACAGGAGTGACCATGGGGGCATCAAGAAGGTGTGCTTCAAGGTGGCCGAGGAGGACCAGGAGGACTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 90 bp CCCAGAAGCATGCAGCTCAAAAGGAAGGCGCGCACGGTAGGGATCTaGTTCAGCTCCACCAGCAGCCTCAGGGCTTTCTCATGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: PRSMQLKRKARTVGI*FSSTSSLRAFSWLL
Trigger: CAGCAACCATGAGAAAGCCCTGAGGCTGCTGGTGGAGCTGAACAAGATCCCTACCGTGCGCGCCTTCCTTTTGAGCTGCATGCTTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 90 bp TGGGGCAGGATCAGCAGGCGCTTGGCCAGAATGTTCTCCACCAGCTaGAAGTCGTTGCGAAGCTGTTTGTTCTTGCTGCTGGTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: WGRISRRLARMFSTS*KSLRSCLFLLLVPS
Trigger: GGAGGGGACCAGCAGCAAGAACAAACAGCTTCGCAACGACTTCAAGCTGGTGGAGAACATTCTGGCCAAGCGCCTGCTGATCCTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 90 bp CAGGCAATCCTCTGGCCAATGCTCTCCAGCTTGGTGTCACAGATGTaGCGGAACTCAAAGTGGGGCATGGTCACGATGGCGCTGCTCAGG +
Preference number: 6 (lower is better)
Translates to: QAILWPMLSSLVSQM*RNSKWGMVTMALLR
Trigger: CCTGAGCAGCGCCATCGTGACCATGCCCCACTTTGAGTTCCGCAACATCTGTGACACCAAGCTGGAGAGCATTGGCCAGAGGATTGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 72 bp CCTCTGAAAACGGCCGCAGGAACACCAGGTCCTCATTaGTGGAGTAGATCTTCCTCCCCACCTGCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: PLKTAAGTPGPH*WSRSSSPPAGQ
Trigger: CTGGCCTGCAGGTGGGGAGGAAGATCTACTCCATCAATGAGGACCTGGTGTTCCTGCGGCCGTTTTCAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 72 bp GCAGCTTGGAGAAGTGGTAGCTGTCGAGGTAGAAGATaGCCTTCAGCGCCTGCCGGCTGCCCTCAATGTGGT +
Preference number: 6 (lower is better)
Translates to: AAWRSGSCRGRR*PSAPAGCPQCG
Trigger: ACCACATTGAGGGCAGCCGGCAGGCGCTGAAGGTCATCTTCTACCTCGACAGCTACCACTTCTCCAAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 72 bp GGTAATACTGCTGAACTTTCTCCAGGGACTGCGCGTTaGTGTCCTGCTGCAAATCCTCCGCGGCCTGGCTGC +
Preference number: 6 (lower is better)
Translates to: GNTAELSPGTAR*CPAANPPRPGC
Trigger: GCAGCCAGGCCGCGGAGGATTTGCAGCAGGACATCAACGCGCAGTCCCTGGAGAAAGTTCAGCAGTATTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp CACAGGGCAGCTCATCTCCAGACCCCATCTCGTCGCTaGCCAAGTAGGAGCTGTTACTTCTCACGCTGGTGT +
Preference number: 6 (lower is better)
Translates to: HRAAHLQTPSRR*PSRSCYFSRWC
Trigger: ACACCAGCGTGAGAAGTAACAGCTCCTACTTGGGCAGCGACGAGATGGGGTCTGGAGATGAGCTGCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp TCCAGCTTGGTGTCACAGATGTTGCGGAACTCAAAGTaGGGCATGGTCACGATGGCGCTGCTCAGGGCCATG +
Preference number: 6 (lower is better)
Translates to: SSLVSQMLRNSK*GMVTMALLRAM
Trigger: CATGGCCCTGAGCAGCGCCATCGTGACCATGCCCCACTTTGAGTTCCGCAACATCTGTGACACCAAGCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp TGCTGTTACACTCGCTGTAGGAGTCGCGATAACTCATaGTGTCGTGGCCTGAGTCCTCCTGGTCCTCCTCGG +
Preference number: 6 (lower is better)
Translates to: CCYTRCRSRDNS*CRGLSPPGPPR
Trigger: CCGAGGAGGACCAGGAGGACTCAGGCCACGACACCATGAGTTATCGCGACTCCTACAGCGAGTGTAACAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp GTCTTGATGGAGTTGGGGAGGTTCCAGGGGTCCTCCTaGATGCTAATCTGGATCAGGCTCCGGCCACGGATT +
Preference number: 6 (lower is better)
Translates to: VLMELGRFQGSS*MLIWIRLRPRI
Trigger: AATCCGTGGCCGGAGCCTGATCCAGATTAGCATCCAGGAGGACCCCTGGAACCTCCCCAACTCCATCAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp CTCCAGGCAGCCATGAAGCTTGTCCTGCTTGTCAGATaGGATCCGCATGTCACAGGGCAGCTCATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: LQAAMKLVLLVR*DPHVTGQLISW
Trigger: CCAGGAGATGAGCTGCCCTGTGACATGCGGATCCCATCTGACAAGCAGGACAAGCTTCATGGCTGCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS TCA 72 bp TCATGTGGTACAGCTTCTCCCCCTTCTCCGCAATCATaGCGTAGGCATCACGCTCCATGCCCAGCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: SCGTASPPSPQS*RRHHAPCPASG
Trigger: GCCTGAAGCTGGGCATGGAGCGTGATGCCTACGTCATGATTGCGGAGAAGGGGGAGAAGCTGTACCACATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp ATTGACCTTCAGAATGCACTGACCAGCACAGAGCCCTaGAGCCATGGCCTCAGAGCCTCTCCCCACAGCATA +
Preference number: 6 (lower is better)
Translates to: IDLQNALTSTEP*SHGLRASPHSI
Trigger: TATGCTGTGGGGAGAGGCTCTGAGGCCATGGCTGCAGGGCTCTGTGCTGGTCAGTGCATTCTGAAGGTCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp TCTGGCCAATGCTCTCCAGCTTGGTGTCACAGATGTTaGGGAACTCAAAGTGGGGCATGGTCACGATGGCGC +
Preference number: 6 (lower is better)
Translates to: SGQCSPAWCHRC*GTQSGAWSRWR
Trigger: GCGCCATCGTGACCATGCCCCACTTTGAGTTCCGCAACATCTGTGACACCAAGCTGGAGAGCATTGGCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp CTCCAGGCAGCCATGAAGCTTGTCCTGCTTGTCAGATaGGATCCGCATGTCACAGGGCAGCTCATCTCCAGA +
Preference number: 6 (lower is better)
Translates to: LQAAMKLVLLVR*DPHVTGQLISR
Trigger: TCTGGAGATGAGCTGCCCTGTGACATGCGGATCCCATCTGACAAGCAGGACAAGCTTCATGGCTGCCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp TTGGGGAGGTTCCAGGGGTCCTCCTGGATGCTAATCTaGATCAGGCTCCGGCCACGGATTGTACACTCTTCT +
Preference number: 6 (lower is better)
Translates to: LGRFQGSSWMLI*IRLRPRIVHSS
Trigger: AGAAGAGTGTACAATCCGTGGCCGGAGCCTGATCCAGATTAGCATCCAGGAGGACCCCTGGAACCTCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 72 bp ATGCAGCTCAAAAGGAAGGCGCGCACGGTAGGGATCTaGTTCAGCTCCACCAGCAGCCTCAGGGCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: MQLKRKARTVGI*FSSTSSLRAFS
Trigger: TGAGAAAGCCCTGAGGCTGCTGGTGGAGCTGAACAAGATCCCTACCGTGCGCGCCTTCCTTTTGAGCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp CTCTGGCCAATGCTCTCCAGCTTGGTGTCACAGATGTaGCGGAACTCAAAGTGGGGCATGGTCACGATGGCG +
Preference number: 6 (lower is better)
Translates to: LWPMLSSLVSQM*RNSKWGMVTMA
Trigger: CGCCATCGTGACCATGCCCCACTTTGAGTTCCGCAACATCTGTGACACCAAGCTGGAGAGCATTGGCCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 72 bp AAGGACTTCATGAGGCGGCAGAGCTCATCCAGGGCATaGATGGGGCGGATCAGCTGGTCTATCTTTACCGCC +
Preference number: 6 (lower is better)
Translates to: KDFMRRQSSSRA*MGRISWSIFTA
Trigger: GGCGGTAAAGATAGACCAGCTGATCCGCCCCATCAATGCCCTGGATGAGCTCTGCCGCCTCATGAAGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS TCA 72 bp TTCTTGCTGCTGGTCCCCTCCATCTCCTCGTCAGCATaGAAGCGGAAGTACTGGGACTCATCCCTGAACTCG +
Preference number: 6 (lower is better)
Translates to: FLLLVPSISSSA*KRKYWDSSLNS
Trigger: CGAGTTCAGGGATGAGTCCCAGTACTTCCGCTTTCATGCTGACGAGGAGATGGAGGGGACCAGCAGCAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 72 bp GGAGCAGAAGGACTGGTTGAGGATGGACTCCACCTCTaGAAACGGCCGCAGGAACACCAGGTCCTCATTGAT +
Preference number: 6 (lower is better)
Translates to: GAEGLVEDGLHL*KRPQEHQVLID
Trigger: ATCAATGAGGACCTGGTGTTCCTGCGGCCGTTTTCAGAGGTGGAGTCCATCCTCAACCAGTCCTTCTGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp TCGGAGACAACAGGTAGCCTTCCAAAGGGATGTCCGTaGTCTTCCGGCCTCCCAGAAGCATGCAGCTCAAAA +
Preference number: 6 (lower is better)
Translates to: SETTGSLPKGCP*SSGLPEACSSK
Trigger: TTTTGAGCTGCATGCTTCTGGGAGGCCGGAAGACCACGGACATCCCTTTGGAAGGCTACCTGTTGTCTCCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp GCAGCTCCACGAATCTGGAAGCACAGTGTGTCCGGCTaGTCGGGGATTTTGATGATCTCTTTGGCCTTCGTG +
Preference number: 6 (lower is better)
Translates to: AAPRIWKHSVSG*SGILMISLAFV
Trigger: CACGAAGGCCAAAGAGATCATCAAAATCCCCGACCAGCCGGACACACTGTGCTTCCAGATTCGTGGAGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp GGTAGCAGGCAATCCTCTGGCCAATGCTCTCCAGCTTaGTGTCACAGATGTTGCGGAACTCAAAGTGGGGCA +
Preference number: 6 (lower is better)
Translates to: GSRQSSGQCSPA*CHRCCGTQSGA
Trigger: TGCCCCACTTTGAGTTCCGCAACATCTGTGACACCAAGCTGGAGAGCATTGGCCAGAGGATTGCCTGCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp CGTCGCTGCCCAAGTAGGAGCTGTTACTTCTCACGCTaGTGTAGGACAGGACCGAGTCTCGATTGCTGTTAC +
Preference number: 6 (lower is better)
Translates to: RRCPSRSCYFSR*CRTGPSLDCCY
Trigger: GTAACAGCAATCGAGACTCGGTCCTGTCCTACACCAGCGTGAGAAGTAACAGCTCCTACTTGGGCAGCGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CCA 72 bp GAAATGCTTGGTCTCTTCGAAAGCCCGGCTCATGACTaGCCCCTTGAGGAGAGCATTGATGGAGTCCACCTG +
Preference number: 6 (lower is better)
Translates to: EMLGLFESPAHD*PLEESIDGVHL
Trigger: CAGGTGGACTCCATCAATGCTCTCCTCAAGGGGCCAGTCATGAGCCGGGCTTTCGAAGAGACCAAGCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371941.4
ENST00000482556.5
ENST00000496915.1
CDS CAA 72 bp CCCTCACCTTGTAAGCTGTGGTTCATAGGGAAATGCTaGGTCTCTTCGAAAGCCCGGCTCATGACTGGCCCC +
Preference number: 6 (lower is better)
Translates to: PSPCKLWFIGKC*VSSKARLMTGP
Trigger: GGGGCCAGTCATGAGCCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCACAGCTTACAAGGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS CAA 90 bp CTGGCTATCCCCTCACCTTGTAAGCTGTGGTTCATAGGGAAATGCTaGGTCTCTTCGAAAGCCCGGCTCATGACTGGCCCCTTGAGGAGA +
Preference number: 6 (lower is better)
Translates to: LAIPSPCKLWFIGKC*VSSKARLMTGPLRR
Trigger: TCTCCTCAAGGGGCCAGTCATGAGCCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCACAGCTTACAAGGTGAGGGGATAGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS TCA 72 bp TCAGCAGGCGCTTGGCCAGAATGTTCTCCACCAGCTTaGAGTCGTTGCGAAGCTGTTTGTTCTTGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SAGAWPECSPPA*SRCEAVCSCCW
Trigger: CCAGCAGCAAGAACAAACAGCTTCGCAACGACTTCAAGCTGGTGGAGAACATTCTGGCCAAGCGCCTGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS TCA 72 bp ATTGCTTCATCTCCTTCAGGGCCACATCCAGCTTGGTaGAGAGCTGCAGGTAGGCATCCTGGATCTCACGGT +
Preference number: 6 (lower is better)
Translates to: IASSPSGPHPAW*RAAGRHPGSHG
Trigger: ACCGTGAGATCCAGGATGCCTACCTGCAGCTCTTCACCAAGCTGGATGTGGCCCTGAAGGAGATGAAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp TCAGCTCCACCAGCAGCCTCAGGGCTTTCTCATGGTTaGTGCAATACTCCTCGTACACGCAGAACTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SAPPAASGLSHG*CNTPRTRRTCP
Trigger: AGGACAAGTTCTGCGTGTACGAGGAGTATTGCAGCAACCATGAGAAAGCCCTGAGGCTGCTGGTGGAGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp CTGCAAACTCCTGGTAGCAGGCAATCCTCTGGCCAATaGTCTCCAGCTTGGTGTCACAGATGTTGCGGAACT +
Preference number: 6 (lower is better)
Translates to: LQTPGSRQSSGQ*SPAWCHRCCGT
Trigger: AGTTCCGCAACATCTGTGACACCAAGCTGGAGAGCATTGGCCAGAGGATTGCCTGCTACCAGGAGTTTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 72 bp TTCAGCTCCACCAGCAGCCTCAGGGCTTTCTCATGGTaGCTGCAATACTCCTCGTACACGCAGAACTTGTCC +
Preference number: 6 (lower is better)
Translates to: FSSTSSLRAFSW*LQYSSYTQNLS
Trigger: GGACAAGTTCTGCGTGTACGAGGAGTATTGCAGCAACCATGAGAAAGCCCTGAGGCTGCTGGTGGAGCTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp TCTGCCGTCTTGGCCATGCAGACAAACCACTTATTCTaGGCCGTGTTGTGGATCTTCCAGCCGTTGGTGACG +
Preference number: 6 (lower is better)
Translates to: SAVLAMQTNHLF*AVLWIFQPLVT
Trigger: CGTCACCAACGGCTGGAAGATCCACAACACGGCCAAGAATAAGTGGTTTGTCTGCATGGCCAAGACGGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp TTGGTCTCTTCGAAAGCCCGGCTCATGACTGGCCCCTaGAGGAGAGCATTGATGGAGTCCACCTGGTTAAAG +
Preference number: 6 (lower is better)
Translates to: LVSSKARLMTGP*RRALMESTWLK
Trigger: CTTTAACCAGGTGGACTCCATCAATGCTCTCCTCAAGGGGCCAGTCATGAGCCGGGCTTTCGAAGAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371941.4
ENST00000482556.5
ENST00000496915.1
CDS TCA 72 bp TATTCTTGGCCGTGTTGTGGATCTTCCAGCCGTTGGTaGCGGTATAGCCGTTGCTATGGTAATCCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: YSWPCCGSSSRW*RYSRCYGNPLS
Trigger: GGACAGCGGATTACCATAGCAACGGCTATACCGTCACCAACGGCTGGAAGATCCACAACACGGCCAAGAATA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp TTCTCACGCTGGTGTAGGACAGGACCGAGTCTCGATTaGTGTTACACTCGCTGTAGGAGTCGCGATAACTCA +
Preference number: 6 (lower is better)
Translates to: FSRWCRTGPSLD*CYTRCRSRDNS
Trigger: TGAGTTATCGCGACTCCTACAGCGAGTGTAACAGCAATCGAGACTCGGTCCTGTCCTACACCAGCGTGAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS GCA 72 bp ATCCCCTCACCTTGTAAGCTGTGGTTCATAGGGAAATaGTTGGTCTCTTCGAAAGCCCGGCTCATGACTGGC +
Preference number: 6 (lower is better)
Translates to: IPSPCKLWFIGK*LVSSKARLMTG
Trigger: GCCAGTCATGAGCCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCACAGCTTACAAGGTGAGGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS CCA 72 bp TTGTTCAGCTCCACCAGCAGCCTCAGGGCTTTCTCATaGTTGCTGCAATACTCCTCGTACACGCAGAACTTG +
Preference number: 6 (lower is better)
Translates to: LFSSTSSLRAFS*LLQYSSYTQNL
Trigger: CAAGTTCTGCGTGTACGAGGAGTATTGCAGCAACCATGAGAAAGCCCTGAGGCTGCTGGTGGAGCTGAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp CACTTGGGGACAGTGCTCAGCTTTCTCCGGCGGTCCTaGATGAGGTTCACCTTCTTGTTCATCATCATGTGG +
Preference number: 6 (lower is better)
Translates to: HLGTVLSFLRRS*MRFTFLFIIMW
Trigger: CCACATGATGATGAACAAGAAGGTGAACCTCATCAAGGACCGCCGGAGAAAGCTGAGCACTGTCCCCAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp ATGTTCTCCACCAGCTTGAAGTCGTTGCGAAGCTGTTaGTTCTTGCTGCTGGTCCCCTCCATCTCCTCGTCA +
Preference number: 6 (lower is better)
Translates to: MFSTSLKSLRSC*FLLLVPSISSS
Trigger: TGACGAGGAGATGGAGGGGACCAGCAGCAAGAACAAACAGCTTCGCAACGACTTCAAGCTGGTGGAGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp ATCAGCAGGCGCTTGGCCAGAATGTTCTCCACCAGCTaGAAGTCGTTGCGAAGCTGTTTGTTCTTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: ISRRLARMFSTS*KSLRSCLFLLL
Trigger: CAGCAGCAAGAACAAACAGCTTCGCAACGACTTCAAGCTGGTGGAGAACATTCTGGCCAAGCGCCTGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp GGTTGTCGAAGAGGAAGAAGGCCCTTTCCTGGATGTTaGCCGCAGAGATCTTTAACAAAGTCCCTTGCAGGA +
Preference number: 6 (lower is better)
Translates to: GCRRGRRPFPGC*PQRSLTKSLAG
Trigger: TCCTGCAAGGGACTTTGTTAAAGATCTCTGCGGGCAACATCCAGGAAAGGGCCTTCTTCCTCTTCGACAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp CACCTTGGACTGGCTATCCCCTCACCTTGTAAGCTGTaGTTCATAGGGAAATGCTTGGTCTCTTCGAAAGCC +
Preference number: 6 (lower is better)
Translates to: HLGLAIPSPCKL*FIGKCLVSSKA
Trigger: GGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCACAGCTTACAAGGTGAGGGGATAGCCAGTCCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496915.1
CDS CAA 72 bp AGGTTGTCGAAGAGGAAGAAGGCCCTTTCCTGGATGTaGCCCGCAGAGATCTTTAACAAAGTCCCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: RLSKRKKALSWM*PAEIFNKVPCR
Trigger: CCTGCAAGGGACTTTGTTAAAGATCTCTGCGGGCAACATCCAGGAAAGGGCCTTCTTCCTCTTCGACAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp AGCTTTCTCCGGCGGTCCTTGATGAGGTTCACCTTCTaGTTCATCATCATGTGGTACAGCTTCTCCCCCTTC +
Preference number: 6 (lower is better)
Translates to: SFLRRSLMRFTF*FIIMWYSFSPF
Trigger: GAAGGGGGAGAAGCTGTACCACATGATGATGAACAAGAAGGTGAACCTCATCAAGGACCGCCGGAGAAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp AACAGGGCTTGGCCCAAGTTGACTCCTTCTTCCGTCTaGCTGATTTCACCAATTTCTAGGAGCCAGGCAACG +
Preference number: 6 (lower is better)
Translates to: NRAWPKLTPSSV*LISPISRSQAT
Trigger: CGTTGCCTGGCTCCTAGAAATTGGTGAAATCAGCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp GGAAACATGGTGGATGATGCCATTCTCCAACAGGGCTaGGCCCAAGTTGACTCCTTCTTCCGTCTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: GNMVDDAILQQG*AQVDSFFRLAD
Trigger: ATCAGCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCTGTTGGAGAATGGCATCATCCACCATGTTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 90 bp GGGATCTTGTTCAGCTCCACCAGCAGCCTCAGGGCTTTCTCATGGTaGCTGCAATACTCCTCGTACACGCAGAACTTGTCCTTGAATTTT +
Preference number: 6 (lower is better)
Translates to: GILFSSTSSLRAFSW*LQYSSYTQNLSLNF
Trigger: AAAATTCAAGGACAAGTTCTGCGTGTACGAGGAGTATTGCAGCAACCATGAGAAAGCCCTGAGGCTGCTGGTGGAGCTGAACAAGATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 90 bp CCATTCTCCAACAGGGCTTGGCCCAAGTTGACTCCTTCTTCCGTCTaGCTGATTTCACCAATTTCTAGGAGCCAGGCAACGAACTCATTG +
Preference number: 6 (lower is better)
Translates to: PFSNRAWPKLTPSSV*LISPISRSQATNSL
Trigger: CAATGAGTTCGTTGCCTGGCTCCTAGAAATTGGTGAAATCAGCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCTGTTGGAGAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 90 bp GTGCTTGTCGGAAACATGGTGGATGATGCCATTCTCCAACAGGGCTaGGCCCAAGTTGACTCCTTCTTCCGTCTTGCTGATTTCACCAAT +
Preference number: 6 (lower is better)
Translates to: VLVGNMVDDAILQQG*AQVDSFFRLADFTN
Trigger: ATTGGTGAAATCAGCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCTGTTGGAGAATGGCATCATCCACCATGTTTCCGACAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp CGGAAGCGATACATCACCTGCTCATTCTTGAACTGGTaGTTGTCGGAAACATGGTGGATGATGCCATTCTCC +
Preference number: 6 (lower is better)
Translates to: RKRYITCSFLNW*LSETWWMMPFS
Trigger: GGAGAATGGCATCATCCACCATGTTTCCGACAAGCACCAGTTCAAGAATGAGCAGGTGATGTATCGCTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp ACGAGAAGGTTGTCGAAGAGGAAGAAGGCCCTTTCCTaGATGTTGCCCGCAGAGATCTTTAACAAAGTCCCT +
Preference number: 6 (lower is better)
Translates to: TRRLSKRKKALS*MLPAEIFNKVP
Trigger: AGGGACTTTGTTAAAGATCTCTGCGGGCAACATCCAGGAAAGGGCCTTCTTCCTCTTCGACAACCTTCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp GAAACATGGTGGATGATGCCATTCTCCAACAGGGCTTaGCCCAAGTTGACTCCTTCTTCCGTCTTGCTGATT +
Preference number: 6 (lower is better)
Translates to: ETWWMMPFSNRA*PKLTPSSVLLI
Trigger: AATCAGCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCTGTTGGAGAATGGCATCATCCACCATGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp TTAAACTCTTGTAAGCTGTGGTTCATAGGGAAATGCTaGGTCTCTTCGAAAGCCCGGCTCATGACTGGCCCC +
Preference number: 6 (lower is better)
Translates to: LNSCKLWFIGKC*VSSKARLMTGP
Trigger: GGGGCCAGTCATGAGCCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCACAGCTTACAAGAGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5
CDS CAA 90 bp GAAACATGGTGGATGATGCCATTCTCCAACAGGGCTTGGCCCAAGTaGACTCCTTCTTCCGTCTTGCTGATTTCACCAATTTCTAGGAGC +
Preference number: 6 (lower is better)
Translates to: ETWWMMPFSNRAWPK*TPSSVLLISPISRS
Trigger: GCTCCTAGAAATTGGTGAAATCAGCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCTGTTGGAGAATGGCATCATCCACCATGTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CCA 72 bp TCCTTGATGAGGTTCACCTTCTTGTTCATCATCATGTaGTACAGCTTCTCCCCCTTCTCCGCAATCATGACG +
Preference number: 6 (lower is better)
Translates to: SLMRFTFLFIIM*YSFSPFSAIMT
Trigger: CGTCATGATTGCGGAGAAGGGGGAGAAGCTGTACCACATGATGATGAACAAGAAGGTGAACCTCATCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS CAA 72 bp TGGATGATGCCATTCTCCAACAGGGCTTGGCCCAAGTaGACTCCTTCTTCCGTCTTGCTGATTTCACCAATT +
Preference number: 6 (lower is better)
Translates to: WMMPFSNRAWPK*TPSSVLLISPI
Trigger: AATTGGTGAAATCAGCAAGACGGAAGAAGGAGTCAACTTGGGCCAAGCCCTGTTGGAGAATGGCATCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371941.4
CDS GCA 72 bp TGTTTAAACTCTTGTAAGCTGTGGTTCATAGGGAAATaGTTGGTCTCTTCGAAAGCCCGGCTCATGACTGGC +
Preference number: 6 (lower is better)
Translates to: CLNSCKLWFIGK*LVSSKARLMTG
Trigger: GCCAGTCATGAGCCGGGCTTTCGAAGAGACCAAGCATTTCCCTATGAACCACAGCTTACAAGAGTTTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371941.4
ENST00000482556.5