RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PREP (Homo sapiens)

Ensembl gene IDs: ENSG00000085377

Ensembl transcript IDs: ENST00000369110.8, ENST00000448705.1, ENST00000652536.2

Found 475 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCCTCCAAAGGCCTGGCTGGTTCCTGCCTCAGGCTCTGCCCATTaGTGCTGTCCTCACCAACCCCCAAAACGTTGCCCATTGTTTGTC +
Preference number: 1 (lower is better)
Translates to: LPPKAWLVPASGSAH*CCPHQPPKRCPLFV
Trigger: GACAAACAATGGGCAACGTTTTGGGGGTTGGTGAGGACAGCAGCAATGGGCAGAGCCTGAGGCAGGAACCAGCCAGGCCTTTGGAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 90 bp CTGGCAGATTTGGTGTCTAATGAGGGTTGCTTCCTGGTTCATAGGTaGCACCGTCTCCTGTGTCCTCACATGGTGGAAGGGATGGGGCGG +
Preference number: 1 (lower is better)
Translates to: LADLVSNEGCFLVHR*HRLLCPHMVEGMGR
Trigger: CCGCCCCATCCCTTCCACCATGTGAGGACACAGGAGACGGTGTCACCTATGAACCAGGAAGCAACCCTCATTAGACACCAAATCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR GCA 90 bp TGTGGTCCAGCCCTCCAGGTGGGAGGGGCCTTGATAAACACCTGGTaGCCTATTGGTGACCTCTCATTGCAAAGGAACAGAGACATTCTT +
Preference number: 1 (lower is better)
Translates to: CGPALQVGGALINTW*PIGDLSLQRNRDIL
Trigger: AAGAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGGTGTTTATCAAGGCCCCTCCCACCTGGAGGGCTGGACCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR GCA 90 bp ACCTCCACAGCTTTCCAGCCTGTCCTTAACCTGCCTTTGAGTCTTTaGAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGGAACTTC +
Preference number: 1 (lower is better)
Translates to: TSTAFQPVLNLPLSL*NSFWALAMWPAGNF
Trigger: GAAGTTCCCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGGTTAAGGACAGGCTGGAAAGCTGTGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 90 bp AATGGCTCAATGTTCCTCCTTCAAGGGCCTCAGTCCTCATCCCACTaGCCTGACCACCCCAACAGTATGACCTTTGCCTCTTTACAGCAA +
Preference number: 1 (lower is better)
Translates to: NGSMFLLQGPQSSSH*PDHPNSMTFASLQQ
Trigger: TTGCTGTAAAGAGGCAAAGGTCATACTGTTGGGGTGGTCAGGCCAGTGGGATGAGGACTGAGGCCCTTGAAGGAGGAACATTGAGCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 90 bp CCTCCAGGTGGGAGGGGCCTTGATAAACACCTGGTGCCCTATTGGTaGCCTCTCATTGCAAAGGAACAGAGACATTCTTCGTCATCATCA +
Preference number: 1 (lower is better)
Translates to: PPGGRGLDKHLVPYW*PLIAKEQRHSSSSS
Trigger: TGATGATGACGAAGAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGGTGTTTATCAAGGCCCCTCCCACCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR TCA 90 bp GCAGAAAGGTTAAATGACTTGCCCCACGTGGATTTCAGGCCTGTCTaGCAGAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTC +
Preference number: 1 (lower is better)
Translates to: AERLNDLPHVDFRPV*QSFLTLYVFSALYV
Trigger: GACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTCTGTCAGACAGGCCTGAAATCCACGTGGGGCAAGTCATTTAACCTTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR TCA 90 bp CAACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTaGGATATGGAGGATGAGAATGGCTCAATGTTCCTCCTTCAAGGG +
Preference number: 1 (lower is better)
Translates to: QLDEGRTFSLCTFSP*DMEDENGSMFLLQG
Trigger: CCCTTGAAGGAGGAACATTGAGCCATTCTCATCCTCCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 90 bp TGTGAGTGCAGGAATAATGTTCCCGTGGGGAAGCATTATGCCCAGTaGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTC +
Preference number: 1 (lower is better)
Translates to: CECRNNVPVGKHYAQ*FLGVNVGKPLRFSV
Trigger: GACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTGGGCATAATGCTTCCCCACGGGAACATTATTCCTGCACTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR TCA 90 bp ATGACTTGCCCCACGTGGATTTCAGGCCTGTCTGACAGAGCTTCTTaGCCCTGTATGTCTTCTCGGCCCTGTATGTCTATCAAGAATGTT +
Preference number: 1 (lower is better)
Translates to: MTCPTWISGLSDRAS*PCMSSRPCMSIKNV
Trigger: AACATTCTTGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTCTGTCAGACAGGCCTGAAATCCACGTGGGGCAAGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR GCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTaGAGGAATAATGTTCCCGTGGGGAAGCATTATGCCCAGTGGTTT +
Preference number: 1 (lower is better)
Translates to: KIKFPRQFCSTVACE*RNNVPVGKHYAQWF
Trigger: AAACCACTGGGCATAATGCTTCCCCACGGGAACATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR GCA 90 bp TTCCTAAGGTTGTGTGAGGACAAACATTCATCCACACAGAGTGCTTaGAGCGGGTGGCACAGGGTAAACATGAGCAAGATAATTTACCAT +
Preference number: 1 (lower is better)
Translates to: FLRLCEDKHSSTQSA*SGWHRVNMSKIIYH
Trigger: ATGGTAAATTATCTTGCTCATGTTTACCCTGTGCCACCCGCTGCAAGCACTCTGTGTGGATGAATGTTTGTCCTCACACAACCTTAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 90 bp CACAGGGTAAACATGAGCAAGATAATTTACCATCTGTCTCCTCCCTaGAATATCAACTGGATGAGGGCAGGACATTTTCTCTCTGCACCT +
Preference number: 1 (lower is better)
Translates to: HRVNMSKIIYHLSPP*NINWMRAGHFLSAP
Trigger: AGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTTGATATTCCAGGGAGGAGACAGATGGTAAATTATCTTGCTCATGTTTACCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR GCA 90 bp ACTGCAGCACTATCCACAACAGCCAAGATAGGGAATCAACCCACGTaGCCATCAGCAGATGAACAGATGAAGAAAATGTGGTACATATAT +
Preference number: 1 (lower is better)
Translates to: TAALSTTAKIGNQPT*PSADEQMKKMWYIY
Trigger: ATATATGTACCACATTTTCTTCATCTGTTCATCTGCTGATGGGCACGTGGGTTGATTCCCTATCTTGGCTGTTGTGGATAGTGCTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 90 bp ACCTCAGAAAGTATGGTTAGATTCTGTGCAACCTTGAAAATGCTCTaGACTCAGTGGGTCCAACTCAGCTATTTGTACTTCACACCACAC +
Preference number: 1 (lower is better)
Translates to: TSESMVRFCATLKML*TQWVQLSYLYFTPH
Trigger: GTGTGGTGTGAAGTACAAATAGCTGAGTTGGACCCACTGAGTCCAGAGCATTTTCAAGGTTGCACAGAATCTAACCATACTTTCTGAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 90 bp GTCATTTGCAGCAACATGGATGGAACTGAAGGTCAATATGGTAAGTaGAATAAGCCAGGCACAGGAAGACAAATATCCCATGTTCTCCAC +
Preference number: 1 (lower is better)
Translates to: VICSNMDGTEGQYGK*NKPGTGRQISHVLH
Trigger: GTGGAGAACATGGGATATTTGTCTTCCTGTGCCTGGCTTATTTCACTTACCATATTGACCTTCAGTTCCATCCATGTTGCTGCAAATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 90 bp TATTACTGTATTCCTCCTCCTCCTCATCAGTTGCTAAGTGACATTTaGGATTTGAACCCAGTCCTGATATCTGAAGCTCACACACTACAC +
Preference number: 1 (lower is better)
Translates to: YYCIPPPPHQLLSDI*DLNPVLISEAHTLH
Trigger: GTGTAGTGTGTGAGCTTCAGATATCAGGACTGGGTTCAAATCCCAAATGTCACTTAGCAACTGATGAGGAGGAGGAGGAATACAGTAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 90 bp GATACAGAAAAGTGGGATCAAATAGAGAAGAATCCCTTAGAGTTCTaGGTAGGAGCCCAATCTCAAGTCTTATTTCTAATGTTTAAAGCT +
Preference number: 1 (lower is better)
Translates to: DTEKWDQIEKNPLEF*VGAQSQVLFLMFKA
Trigger: AGCTTTAAACATTAGAAATAAGACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCCCACTTTTCTGTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 90 bp TCTTCCTCCAAAGGCCTGGCTGGTTCCTGCCTCAGGCTCTGCCCATaGCTGCTGTCCTCACCAACCCCCAAAACGTTGCCCATTGTTTGT +
Preference number: 2 (lower is better)
Translates to: SSSKGLAGSCLRLCP*LLSSPTPKTLPIVC
Trigger: ACAAACAATGGGCAACGTTTTGGGGGTTGGTGAGGACAGCAGCAATGGGCAGAGCCTGAGGCAGGAACCAGCCAGGCCTTTGGAGGAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 90 bp ACCCCGCTTTTCCCTAGGCTCTCCTGCTGTCAGTTTCCCACAGTGTaGTCGGCTTTCATCTCTCAGTGGCTTCACCTGACTGAGCTGCCT +
Preference number: 2 (lower is better)
Translates to: TPLFPRLSCCQFPTV*SAFISQWLHLTELP
Trigger: AGGCAGCTCAGTCAGGTGAAGCCACTGAGAGATGAAAGCCGACAACACTGTGGGAAACTGACAGCAGGAGAGCCTAGGGAAAAGCGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR TCA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGCTTAGCAGGGCCTTGTaGCAAAGCAGTGAGGCCACC +
Preference number: 2 (lower is better)
Translates to: PAFESLQLLLGISYVACWLSRAL*QSSEAT
Trigger: GGTGGCCTCACTGCTTTGTCACAAGGCCCTGCTAAG...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR TCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGACGTGGGAAAGCCCTTaGGGTTTTCTGTCGCTGTCA +
Preference number: 2 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWTWESP*GFLSLS
Trigger: TGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGT...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 90 bp TTTACAGCAACCTCCACAGCTTTCCAGCCTGTCCTTAACCTGCCTTaGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: FTATSTAFQPVLNLP*SLCNSFWALAMWPA
Trigger: AGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGGTTAAGGACAGGCTGGAAAGCTGTGGAGGTTGCTGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR GCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGCGTGGGGAAGCATTATaGCCAGTGGTTTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: DDRVSACNTSYWHTLFPERGEAL*PVVSWC
Trigger: ACACCAAGAAACCACTGGGCATAATGCTTCCCCACG...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGGAAAGAGGCTGCCTCTaGCTTGACCATGCAAATGTA +
Preference number: 2 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWERGCL*LDHANV
Trigger: TACATTTGCATGGTCAAGCCAGAGGCAGCCTCTTTC...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CCA 90 bp GAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTCTATCAAGAATGTTGCTGATTCCTAATCTGTaGCCTGTGTGGTCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: ELLDPVCLLGPVCLSRMLLIPNL*PVWSSP
Trigger: AGGGCTGGACCACACAGGCCACAGATTAGGAATCAG...CAACATTCTTGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR CCA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGGCAGGAGAAACAGCTTaGGAAATGCTGAAATTTCTG +
Preference number: 2 (lower is better)
Translates to: PAFESLQLLLGISYVACWAGETA*EMLKFL
Trigger: CAGAAATTTCAGCATTTCCCAAGCTGTTTCTCCTGC...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGTGCAACACTAGCTACTaGCACACTTTGTTTCCAGAG +
Preference number: 2 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWCNTSY*HTLFPE
Trigger: CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCA...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 90 bp GGAGGGGCCTTGATAAACACCTGGTGCCCTATTGGTGACCTCTCATaGCAAAGGAACAGAGACATTCTTCGTCATCATCAATCAACCAGT +
Preference number: 2 (lower is better)
Translates to: GGALINTWCPIGDLS*QRNRDILRHHQSTS
Trigger: ACTGGTTGATTGATGATGACGAAGAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGGTGTTTATCAAGGCCCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR CAA 90 bp TGGACCTTTGCCAAATGGGGAAAAGGTATTATGTGCTTCCTAAGGTaGTGTGAGGACAAACATTCATCCACACAGAGTGCTTGCAGCGGG +
Preference number: 2 (lower is better)
Translates to: WTFAKWGKGIMCFLR*CEDKHSSTQSACSG
Trigger: CCCGCTGCAAGCACTCTGTGTGGATGAATGTTTGTCCTCACACAACCTTAGGAAGCACATAATACCTTTTCCCCATTTGGCAAAGGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR GCA 90 bp CTGACAGAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTCTATCAAGATTGATAAACACCTGGTaGCCTATTGGTGACCTCTCA +
Preference number: 2 (lower is better)
Translates to: LTELLDPVCLLGPVCLSRLINTW*PIGDLS
Trigger: TGAGAGGTCACCAATAGGGCACCAGGTGTTTATCAA...TCTTGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR CCA 90 bp CTGACAGAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTCTATCAAGATTCACAGAAACATTGTaGGGAACATCCAGCGCTCTT +
Preference number: 2 (lower is better)
Translates to: LTELLDPVCLLGPVCLSRFTETL*GTSSAL
Trigger: AAGAGCGCTGGATGTTCCCCACAATGTTTCTGTGAA...TCTTGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTCTGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR TCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGAAGAAGTCTTCTCCATaGGAACAGTTCTCACATTTA +
Preference number: 2 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWKKSSP*EQFSHL
Trigger: TAAATGTGAGAACTGTTCTCATGGAGAAGACTTCTT...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR GCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGTATCAAAAAGATATCTaGACTCCTGTGTCTACTGCA +
Preference number: 2 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWYQKDI*TPVSTA
Trigger: TGCAGTAGACACAGGAGTGCAGATATCTTTTTGATA...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 90 bp GCTGTAAAGCAGACCTCAGAAAGTATGGTTAGATTCTGTGCAACCTaGAAAATGCTCTGGACTCAGTGGGTCCAACTCAGCTATTTGTAC +
Preference number: 2 (lower is better)
Translates to: AVKQTSESMVRFCAT*KMLWTQWVQLSYLY
Trigger: GTACAAATAGCTGAGTTGGACCCACTGAGTCCAGAGCATTTTCAAGGTTGCACAGAATCTAACCATACTTTCTGAGGTCTGCTTTACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 90 bp TGTATTCCTCCTCCTCCTCATCAGTTGCTAAGTGACATTTGGGATTaGAACCCAGTCCTGATATCTGAAGCTCACACACTACACACTGTA +
Preference number: 2 (lower is better)
Translates to: CIPPPPHQLLSDIWD*NPVLISEAHTLHTV
Trigger: TACAGTGTGTAGTGTGTGAGCTTCAGATATCAGGACTGGGTTCAAATCCCAAATGTCACTTAGCAACTGATGAGGAGGAGGAGGAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR TCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTACGTGGGAAAGCCCTTaGGGTTTTCTGTCGCTGTCA +
Preference number: 2 (lower is better)
Translates to: CCRKVKCFILTENSTSGVTWESP*GFLSLS
Trigger: TGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGT...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR-3UTR TCA 90 bp AAAACTGTGGCAGAAAGGTTAAATGACTTGCCCCACGTGGATTTCAGGCCTGTCCCATTTCTAGACAATTaGAGGGTAATTCACCAAGCT +
Preference number: 2 (lower is better)
Translates to: KTVAERLNDLPHVDFRPVPFLDN*RVIHQA
Trigger: AGCTTGGTGAATTACCCTTCAATTGTCTAGAAATGG...GACAGGCCTGAAATCCACGTGGGGCAAGTCATTTAACCTTTCTGCCACAGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR GCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTACTGTAGCCTGTGAGTaGAGGAATAATGTTCCCGTG +
Preference number: 2 (lower is better)
Translates to: RKVKCFILTENSTSGVAPTVACE*RNNVPV
Trigger: CACGGGAACATTATTCCTGCACTCACAGGCTACAGT...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCGGAATAATGTTCCCGTaGGGAAGCATTATGCCCAGT +
Preference number: 2 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCGIMFP*GSIMPS
Trigger: ACTGGGCATAATGCTTCCCCACGGGAACATTATTCC...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR-3UTR CCA 90 bp AATAGCATTCCTTCTCACGGACTATTCATTTGCCCCACTTTGTTTCTTCACAGCAATCCCTTAGAGTTCTaGGTAGGAGCCCAATCTCAA +
Preference number: 2 (lower is better)
Translates to: NSIPSHGLFICPTLFLHSNPLEF*VGAQSQ
Trigger: TTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATT...GCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR GCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCGTGGGGAAGCATTATaGCCAGTGGTTTCTTGGTGT +
Preference number: 2 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIRGEAL*PVVSWC
Trigger: ACACCAAGAAACCACTGGGCATAATGCTTCCCCACG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR-3UTR GCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTATTTTCTTTCTTTCCTaGCATGCTGGTCAGCAGTTA +
Preference number: 2 (lower is better)
Translates to: GSNREESLRVLGRSPISSIFFLS*HAGQQL
Trigger: TAACTGCTGACCAGCATGGCAGGAAAGAAAGAAAAT...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTAAGCATTATGCCCAGTaGTTTCTTGGTGTCAACGTG +
Preference number: 2 (lower is better)
Translates to: TLATGTLCFQRSYGESYTKHYAQ*FLGVNV
Trigger: CACGTTGACACCAAGAAACCACTGGGCATAATGCTT...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR TCA 90 bp AGACAATTGAAGGGTAATTCACCAAGCTATAATAATGCCCTAGTTTCACAGAAACTGGTGCCCTATTGGTaGCCTCTCATTGCAAAGGAA +
Preference number: 2 (lower is better)
Translates to: RQLKGNSPSYNNALVSQKLVPYW*PLIAKE
Trigger: TTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAG...TTTCTGTGAAACTAGGGCATTATTATAGCTTGGTGAATTACCCTTCAATTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR GCA 90 bp AATAATGCCCTAGTTTCACAGAAACATTGTGGGGAACATCCAGCGCTCTTTATTTTGGTGACCTCTCATTaGAAAGGAACAGAGACATTC +
Preference number: 2 (lower is better)
Translates to: NNALVSQKHCGEHPALFILVTSH*KGTETF
Trigger: GAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAA...AATAAAGAGCGCTGGATGTTCCCCACAATGTTTCTGTGAAACTAGGGCATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTAAGCATTATGCCCAGTaGTTTCTTGGTGTCAACGTG +
Preference number: 2 (lower is better)
Translates to: CCRKVKCFILTENSTSGVKHYAQ*FLGVNV
Trigger: CACGTTGACACCAAGAAACCACTGGGCATAATGCTT...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR-3UTR CCA 90 bp AGACAATTGAAGGGTAATTCACCAAGCTATAATAATGCCCTAGTTTCACAGAAAGCCTTGATAAACACCTaGTGCCCTATTGGTGACCTC +
Preference number: 2 (lower is better)
Translates to: RQLKGNSPSYNNALVSQKALINT*CPIGDL
Trigger: GAGGTCACCAATAGGGCACCAGGTGTTTATCAAGGC...TTTCTGTGAAACTAGGGCATTATTATAGCTTGGTGAATTACCCTTCAATTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR TCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCAAGTATGCCCGACTATaGTCCTTAATTCAGCAATCT +
Preference number: 2 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCKYARL*SLIQQS
Trigger: AGATTGCTGAATTAAGGATCATAGTCGGGCATACTT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR-3UTR TCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCAAGAAGTCTTCTCCATaGGAACAGTTCTCACATTTA +
Preference number: 2 (lower is better)
Translates to: CRKVKCFILTENSTSGVAKKSSP*EQFSHL
Trigger: TAAATGTGAGAACTGTTCTCATGGAGAAGACTTCTT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR-3UTR CCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTTTTTACCCAACTAAGTaGTCAGTGTTTGTTTATGAC +
Preference number: 2 (lower is better)
Translates to: GSNREESLRVLGRSPISSFYPTK*SVFVYD
Trigger: GTCATAAACAAACACTGACCACTTAGTTGGGTAAAA...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTGTCTTTCAATATGCTTaGTATGCAGTGATATGCTTG +
Preference number: 2 (lower is better)
Translates to: TLATGTLCFQRSYGESYTVFQYA*YAVICL
Trigger: CAAGCATATCACTGCATACCAAGCATATTGAAAGAC...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR TCA 90 bp AGACAATTGAAGGGTAATTCACCAAGCTATAATAATGCCCTAGTTTCACAGAAATCACAAACAATGTTCTaGTTCCTAATCTGTGGCCTG +
Preference number: 2 (lower is better)
Translates to: RQLKGNSPSYNNALVSQKSQTMF*FLICGL
Trigger: CAGGCCACAGATTAGGAATCAGAACATTGTTTGTGA...TTTCTGTGAAACTAGGGCATTATTATAGCTTGGTGAATTACCCTTCAATTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR CCA 90 bp AACAGCTTGGGAAATGCTGAAATTTCTGACTGTAAGAAATGCTTGGATATATGTACTCATGTGATCTCTTaGAACCAAGGATCCTTGGAT +
Preference number: 2 (lower is better)
Translates to: NSLGNAEISDCKKCLDICTHVIS*NQGSLD
Trigger: ATCCAAGGATCCTTGGTTCCAAGAGATCACATGAGT...ACATATATCCAAGCATTTCTTACAGTCAGAAATTTCAGCATTTCCCAAGCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 90 bp CTGCCTTTTCAGGATATTTCACTTAATCAGACTATACCCAGTCATTaGTGTCTGGCTTCTTTCACTTATAATGTTTTTGAGATTCATCCA +
Preference number: 2 (lower is better)
Translates to: LPFQDISLNQTIPSH*CLASFTYNVFEIHP
Trigger: TGGATGAATCTCAAAAACATTATAAGTGAAAGAAGCCAGACACAAATGACTGGGTATAGTCTGATTAAGTGAAATATCCTGAAAAGGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR GCA 72 bp GCCTGGCTGGTTCCTGCCTCAGGCTCTGCCCATTGCTaGTGTCCTCACCAACCCCCAAAACGTTGCCCATTG +
Preference number: 3 (lower is better)
Translates to: AWLVPASGSAHC*CPHQPPKRCPL
Trigger: CAATGGGCAACGTTTTGGGGGTTGGTGAGGACAGCAGCAATGGGCAGAGCCTGAGGCAGGAACCAGCCAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR GCA 72 bp GCCCTCCAGGTGGGAGGGGCCTTGATAAACACCTGGTaGCCTATTGGTGACCTCTCATTGCAAAGGAACAGA +
Preference number: 3 (lower is better)
Translates to: ALQVGGALINTW*PIGDLSLQRNR
Trigger: TCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGGTGTTTATCAAGGCCCCTCCCACCTGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR CCA 72 bp ATGTTCCTCCTTCAAGGGCCTCAGTCCTCATCCCACTaGCCTGACCACCCCAACAGTATGACCTTTGCCTCT +
Preference number: 3 (lower is better)
Translates to: MFLLQGPQSSSH*PDHPNSMTFAS
Trigger: AGAGGCAAAGGTCATACTGTTGGGGTGGTCAGGCCAGTGGGATGAGGACTGAGGCCCTTGAAGGAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CAA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGATGCCCAGTGGTTTCTaGGTGTCAACGTGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: PAFESLQLLLGISYVACWMPSGF*VSTWES
Trigger: GCTTTCCCACGTTGACACCAAGAAACCACTGGGCAT...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 72 bp CCCAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTaGGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAA +
Preference number: 3 (lower is better)
Translates to: PSGFLVSTWESP*GFLSLSGGSTK
Trigger: TTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR TCA 72 bp CCCACGTGGATTTCAGGCCTGTCTGACAGAGCTTCTTaGCCCTGTATGTCTTCTCGGCCCTGTATGTCTATC +
Preference number: 3 (lower is better)
Translates to: PTWISGLSDRAS*PCMSSRPCMSI
Trigger: GATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTCTGTCAGACAGGCCTGAAATCCACGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR TCA 72 bp AGTCCTCATCCCACTGGCCTGACCACCCCAACAGTATaGCCTTTGCCTCTTTACAGCAACCTCCACAGCTTT +
Preference number: 3 (lower is better)
Translates to: SPHPTGLTTPTV*PLPLYSNLHSF
Trigger: AAAGCTGTGGAGGTTGCTGTAAAGAGGCAAAGGTCATACTGTTGGGGTGGTCAGGCCAGTGGGATGAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 72 bp TTGGTGTCTAATGAGGGTTGCTTCCTGGTTCATAGGTaGCACCGTCTCCTGTGTCCTCACATGGTGGAAGGG +
Preference number: 3 (lower is better)
Translates to: LVSNEGCFLVHR*HRLLCPHMVEG
Trigger: CCCTTCCACCATGTGAGGACACAGGAGACGGTGTCACCTATGAACCAGGAAGCAACCCTCATTAGACACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 72 bp GGGAGGGGCCTTGATAAACACCTGGTGCCCTATTGGTaGCCTCTCATTGCAAAGGAACAGAGACATTCTTCG +
Preference number: 3 (lower is better)
Translates to: GRGLDKHLVPYW*PLIAKEQRHSS
Trigger: CGAAGAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGGTGTTTATCAAGGCCCCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR TCA 72 bp GGTAACAAATGCTCTGGTGTGCTTAGCAGGGCCTTGTaGCAAAGCAGTGAGGCCACCTGTGCAACATGTACA +
Preference number: 3 (lower is better)
Translates to: GNKCSGVLSRAL*QSSEATCATCT
Trigger: TGTACATGTTGCACAGGTGGCCTCACTGCTTTGTCACAAGGCCCTGCTAAGCACACCAGAGCATTTGTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 72 bp GAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTaGGATATGGAGGATGAGAATGGCTCAATGTTCCTC +
Preference number: 3 (lower is better)
Translates to: EGRTFSLCTFSP*DMEDENGSMFL
Trigger: GAGGAACATTGAGCCATTCTCATCCTCCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR GCA 72 bp TTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTaGAGGAATAATGTTCCCGTGGGGAAGCATTATGCC +
Preference number: 3 (lower is better)
Translates to: FPRQFCSTVACE*RNNVPVGKHYA
Trigger: GGCATAATGCTTCCCCACGGGAACATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR CCA 72 bp GTCCTTAACCTGCCTTTGAGTCTTTGCAACTCCTTCTaGGCATTAGCTATGTGGCCTGCTGGGAACTTCCAG +
Preference number: 3 (lower is better)
Translates to: VLNLPLSLCNSF*ALAMWPAGNFQ
Trigger: CTGGAAGTTCCCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGGTTAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 72 bp TTTACCATCTGTCTCCTCCCTGGAATATCAACTGGATaGGGGCAGGACATTTTCTCTCTGCACCTTCAGCCC +
Preference number: 3 (lower is better)
Translates to: FTICLLPGISTG*GQDIFSLHLQP
Trigger: GGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTTGATATTCCAGGGAGGAGACAGATGGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CAA 90 bp AAAACTGTGGCAGAAAGGTTAAATGACTTGCCCCACGTGGATTTCAGGCCTGTCACACCTGGTGCCCTATaGGTGACCTCTCATTGCAAA +
Preference number: 3 (lower is better)
Translates to: KTVAERLNDLPHVDFRPVTPGAL*VTSHCK
Trigger: TTTGCAATGAGAGGTCACCAATAGGGCACCAGGTGT...GACAGGCCTGAAATCCACGTGGGGCAAGTCATTTAACCTTTCTGCCACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR-3UTR CAA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGTGCAGGAGAAACAGCTaGGGAAATGCTGAAATTTCT +
Preference number: 3 (lower is better)
Translates to: PAFESLQLLLGISYVACWCRRNS*GNAEIS
Trigger: AGAAATTTCAGCATTTCCCAAGCTGTTTCTCCTGCA...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CAA 90 bp GAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTCTATCAAGAATGTTGAAACAGGAGGCCAGTTaGCCAACTGCTGATGTAGAA +
Preference number: 3 (lower is better)
Translates to: ELLDPVCLLGPVCLSRMLKQEAS*PTADVE
Trigger: TTCTACATCAGCAGTTGGCAAACTGGCCTCCTGTTT...CAACATTCTTGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
3UTR TCA 72 bp AGACCTCAGAAAGTATGGTTAGATTCTGTGCAACCTTaGAAATGCTCTGGACTCAGTGGGTCCAACTCAGCT +
Preference number: 3 (lower is better)
Translates to: RPQKVWLDSVQP*KCSGLSGSNSA
Trigger: AGCTGAGTTGGACCCACTGAGTCCAGAGCATTTTCAAGGTTGCACAGAATCTAACCATACTTTCTGAGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 72 bp ATTCCTCCTCCTCCTCATCAGTTGCTAAGTGACATTTaGGATTTGAACCCAGTCCTGATATCTGAAGCTCAC +
Preference number: 3 (lower is better)
Translates to: IPPPPHQLLSDI*DLNPVLISEAH
Trigger: GTGAGCTTCAGATATCAGGACTGGGTTCAAATCCCAAATGTCACTTAGCAACTGATGAGGAGGAGGAGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 72 bp GACAAACATTCATCCACACAGAGTGCTTGCAGCGGGTaGCACAGGGTAAACATGAGCAAGATAATTTACCAT +
Preference number: 3 (lower is better)
Translates to: DKHSSTQSACSG*HRVNMSKIIYH
Trigger: ATGGTAAATTATCTTGCTCATGTTTACCCTGTGCCACCCGCTGCAAGCACTCTGTGTGGATGAATGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CAA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTATGCCCAGTGGTTTCTaGGTGTCAACGTGGGAAAGC +
Preference number: 3 (lower is better)
Translates to: CCRKVKCFILTENSTSGVMPSGF*VSTWES
Trigger: GCTTTCCCACGTTGACACCAAGAAACCACTGGGCAT...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR-3UTR CAA 90 bp AATAGCATTCCTTCTCACGGACTATTCATTTGCCCCACTTTGTTTCTTCACAGCCTGAGATCCTGTCATTaGCAGCAACATGGATGGAAC +
Preference number: 3 (lower is better)
Translates to: NSIPSHGLFICPTLFLHSLRSCH*QQHGWN
Trigger: GTTCCATCCATGTTGCTGCAAATGACAGGATCTCAG...GCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 72 bp ATGGGGAAAAGGTATTATGTGCTTCCTAAGGTTGTGTaGGGACAAACATTCATCCACACAGAGTGCTTGCAG +
Preference number: 3 (lower is better)
Translates to: MGKRYYVLPKVV*GQTFIHTECLQ
Trigger: CTGCAAGCACTCTGTGTGGATGAATGTTTGTCCTCACACAACCTTAGGAAGCACATAATACCTTTTCCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 72 bp ATAATTTACCATCTGTCTCCTCCCTGGAATATCAACTaGATGAGGGCAGGACATTTTCTCTCTGCACCTTCA +
Preference number: 3 (lower is better)
Translates to: IIYHLSPPWNIN*MRAGHFLSAPS
Trigger: TGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTTGATATTCCAGGGAGGAGACAGATGGTAAATTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR-3UTR CAA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTAACGTGGGAAAGCCCTaGAGGTTTTCTGTCGCTGTC +
Preference number: 3 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFNVGKP*RFSVAV
Trigger: GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTT...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR GCA 72 bp ACTTGGACCTTTGCCAAATGGGGAAAAGGTATTATGTaGTTCCTAAGGTTGTGTGAGGACAAACATTCATCC +
Preference number: 3 (lower is better)
Translates to: TWTFAKWGKGIM*FLRLCEDKHSS
Trigger: GGATGAATGTTTGTCCTCACACAACCTTAGGAAGCACATAATACCTTTTCCCCATTTGGCAAAGGTCCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR GCA 72 bp AATACCATAAACTGGTGGGTTGTCAACAACAGAAATTaGTCTCTCACAGTCCTAGAGTCTGGGACATCTAAG +
Preference number: 3 (lower is better)
Translates to: NTINWWVVNNRN*SLTVLESGTSK
Trigger: CTTAGATGTCCCAGACTCTAGGACTGTGAGAGAGCAATTTCTGTTGTTGACAACCCACCAGTTTATGGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 72 bp AGTATGGTTAGATTCTGTGCAACCTTGAAAATGCTCTaGACTCAGTGGGTCCAACTCAGCTATTTGTACTTC +
Preference number: 3 (lower is better)
Translates to: SMVRFCATLKML*TQWVQLSYLYF
Trigger: GAAGTACAAATAGCTGAGTTGGACCCACTGAGTCCAGAGCATTTTCAAGGTTGCACAGAATCTAACCATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR TCA 72 bp AGCAACATGGATGGAACTGAAGGTCAATATGGTAAGTaGAATAAGCCAGGCACAGGAAGACAAATATCCCAT +
Preference number: 3 (lower is better)
Translates to: SNMDGTEGQYGK*NKPGTGRQISH
Trigger: ATGGGATATTTGTCTTCCTGTGCCTGGCTTATTTCACTTACCATATTGACCTTCAGTTCCATCCATGTTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR GCA 72 bp AGTATATCAAAAAGATATCTGCACTCCTGTGTCTACTaGAGCACTATCCACAACAGCCAAGATAGGGAATCA +
Preference number: 3 (lower is better)
Translates to: SISKRYLHSCVY*STIHNSQDRES
Trigger: TGATTCCCTATCTTGGCTGTTGTGGATAGTGCTGCAGTAGACACAGGAGTGCAGATATCTTTTTGATATACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR GCA 72 bp GACTCAAATAGCATTCCTTCTCACGGACTATTCATTTaGCCCACTTTGTTTCTTCACAGCTCTTTTTATTCC +
Preference number: 3 (lower is better)
Translates to: DSNSIPSHGLFI*PTLFLHSSFYS
Trigger: GGAATAAAAAGAGCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATTTGAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 72 bp AAGTGGGATCAAATAGAGAAGAATCCCTTAGAGTTCTaGGTAGGAGCCCAATCTCAAGTCTTATTTCTAATG +
Preference number: 3 (lower is better)
Translates to: KWDQIEKNPLEF*VGAQSQVLFLM
Trigger: CATTAGAAATAAGACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCCCACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 72 bp ATGAAAAAGACTGAGATCCTGTCATTTGCAGCAACATaGATGGAACTGAAGGTCAATATGGTAAGTGAAATA +
Preference number: 3 (lower is better)
Translates to: MKKTEILSFAAT*MELKVNMVSEI
Trigger: TATTTCACTTACCATATTGACCTTCAGTTCCATCCATGTTGCTGCAAATGACAGGATCTCAGTCTTTTTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CCA 72 bp GAAAAACCAAGCCATATAGCTGTCTTTCAATATGCTTaGTATGCAGTGATATGCTTGATAGAAAATGGTATG +
Preference number: 3 (lower is better)
Translates to: EKPSHIAVFQYA*YAVICLIENGM
Trigger: CATACCATTTTCTATCAAGCATATCACTGCATACCAAGCATATTGAAAGACAGCTATATGGCTTGGTTTTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCCTAGCACAAACGGACTaGCGGCGCGGCGGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVLAQTD*RRGGED
Trigger: GTCCTCGCCGCCGCGCCGCCAGTCCGTTTGTGCTAG...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGCTGGGGTTACTGCCCTaGCTGCCCACCTCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWLGLLP*LPTSWL
Trigger: CAGCCAGGAGGTGGGCAGGCAGGGCAGTAACCCCAG...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAAGCAGGGGGTTGCTTTaGTTCCTGCTGCGGCCCACG +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEESRGLL*FLLRPT
Trigger: CGTGGGCCGCAGCAGGAAGCAAAGCAACCCCCTGCT...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCCTATCACTTTGGCTGTaGGCTTCCCCGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVLSLWL*ASPPRG
Trigger: GCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAG...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGCTCATCCCACTGGCCTaGCCACCCCAACAGTATGAC +
Preference number: 4 (lower is better)
Translates to: PAFESLQLLLGISYVACWLIPLA*PPQQYD
Trigger: GTCATACTGTTGGGGTGGTCAGGCCAGTGGGATGAG...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGACCACGCGGTCATCATaGTCAGCAGTGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLTTRSS*SAVRSS
Trigger: GCTGCTCCTCACTGCTGACCATGATGACCGCGTGGT...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCGATTGTCACCCAGTCTaGGCCACTGGCACTCAGACC +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVDCHPV*ATGTQT
Trigger: GGTCTGAGTGCCAGTGGCTCAGACTGGGTGACAATC...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGATGAACTTCAGGGAGTaGAGCGGGACCACGCGGTCA +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWMNFRE*SGTTRS
Trigger: TGACCGCGTGGTCCCGCTTCACTCCCTGAAGTTCAT...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGTGTACCCTACAATGCTaGCGACATCGAGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLCTLQC*RHRAGR
Trigger: CCTTCCCGCTCGATGTCGGCAGCATTGTAGGGTACA...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGTCCACACAGAGTGCTTaGAGCGGGTGGCACAGGGTA +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWSTQSA*SGWHRV
Trigger: TACCCTGTGCCACCCGCTGCAAGCACTCTGTGTGGA...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGTTCATCCACACAGAGTaGTTGCAGCGGGTGGCACAG +
Preference number: 4 (lower is better)
Translates to: PAFESLQLLLGISYVACWFIHTE*LQRVAQ
Trigger: CTGTGCCACCCGCTGCAAGCACTCTGTGTGGATGAA...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCCCCACACTGGCTTCCTaGTCTTCCTCCAAAGGCCTG +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVPTLAS*SSSKGL
Trigger: CAGGCCTTTGGAGGAAGAGCAGGAAGCCAGTGTGGG...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCGGCTTCCCCGCCCCGTaGCCCGCCTTGGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCGFPAP*PALVST
Trigger: CGTGGACACCAAGGCGGGCCACGGGGCGGGGAAGCC...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTGGCTTCCCCGCCCCGTaGCCCGCCTTGGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: TLATGTLCFQRSYGESYTGFPAP*PALVST
Trigger: CGTGGACACCAAGGCGGGCCACGGGGCGGGGAAGCC...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGTGCCCACCTCCTGGCTaGGGAACTTGGACCTTTGCC +
Preference number: 4 (lower is better)
Translates to: DDRVSACNTSYWHTLFPECPPPG*GTWTFA
Trigger: GGCAAAGGTCCAAGTTCCCCAGCCAGGAGGTGGGCA...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 72 bp GCCCAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTaGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAA +
Preference number: 4 (lower is better)
Translates to: AQWFLGVNVGKP*RFSVAVRRKHE
Trigger: TTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCCGGCCCACGATGTACTaGAGGGTGGCAATGAACTTC +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVRPTMY*RVAMNF
Trigger: GAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCG...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGCTCGGAGTGCCACTGTaGCATCGTCAGACAGTATGT +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLLGVPL*HRQTVC
Trigger: ACATACTGTCTGACGATGGCACAGTGGCACTCCGAG...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCGGTTGCTTTGCTTCCTaGTGCGGCCCACGATGTACT +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVGCFAS*CGPRCT
Trigger: AGTACATCGTGGGCCGCAGCAGGAAGCAAAGCAACC...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGGGTCCAGGAACACTCTaGCCTCACCCTCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLGPGTL*PHPLRN
Trigger: ATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACC...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGGGTCCAGGAACACTCTaGCCTCACCCTCTAAGGAAT +
Preference number: 4 (lower is better)
Translates to: PAFESLQLLLGISYVACWGPGTL*PHPLRN
Trigger: ATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACC...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGATTCCCTTCCCATCATaGGTCCAGGCCATACAGCTG +
Preference number: 4 (lower is better)
Translates to: PAFESLQLLLGISYVACWIPFPS*VQAIQL
Trigger: CAGCTGTATGGCCTGGACCCATGATGGGAAGGGAAT...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGCCAAGGCCCAGCTCCTaGGGTTACTGCCCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRPRPSS*GYCPAC
Trigger: GCAGGCAGGGCAGTAACCCCAGGAGCTGGGCCTTGG...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 72 bp TTCCCTAGGCTCTCCTGCTGTCAGTTTCCCACAGTGTaGTCGGCTTTCATCTCTCAGTGGCTTCACCTGACT +
Preference number: 4 (lower is better)
Translates to: FPRLSCCQFPTV*SAFISQWLHLT
Trigger: AGTCAGGTGAAGCCACTGAGAGATGAAAGCCGACAACACTGTGGGAAACTGACAGCAGGAGAGCCTAGGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGAAGAGGTCAGGTCTCTaGTTTGCACAAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLKRSGL*FAQAAT
Trigger: AGTGGCTGCTTGTGCAAATCAGAGACCTGACCTCTT...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCACTGAAGGGTGGCAATaGACTTCAGGGAGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVTEGWQ*TSGSEA
Trigger: CGCTTCACTCCCTGAAGTTCATTGCCACCCTTCAGT...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGACTGAAGGGTGGCAATaGACTTCAGGGAGTGAAGCG +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWTEGWQ*TSGSEA
Trigger: CGCTTCACTCCCTGAAGTTCATTGCCACCCTTCAGT...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGCACCCATAATCAGTaGTCCAAGCATGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVSTHNQ*SKHGRW
Trigger: CCATCGGCCATGCTTGGACCACTGATTATGGGTGCT...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCACTGAAGGGACAGCATaGCCGGGGACAGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVATEGTA*PGTGRG
Trigger: CCCCCTGCCTGTCCCCGGCCATGCTGTCCCTTCAGT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGATTCACCATCTTCGCTaGACGCATAACCTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWIHHLR*THNLGV
Trigger: CACTCCGAGGTTATGCGTTCAGCGAAGATGGTGAAT...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCTCAGTGTCCTTCTTCTaGCCGCTGTACCCTACAATG +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVSVSFF*PLYPTM
Trigger: CATTGTAGGGTACAGCGGTCAGAAGAAGGACACTGA...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGCCCAGTCCTGATATCTaGAGCTCACACACTACACAC +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWPSPDI*SSHTTH
Trigger: GTGTGTAGTGTGTGAGCTTCAGATATCAGGACTGGG...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGTGCACCTTCAGCCCCTaGGATATGGAGGATGAGAAT +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWCTFSP*DMEDEN
Trigger: ATTCTCATCCTCCATATCTCAGGGGCTGAAGGTGCA...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGCCTCTGATGGGACACTaGTCAAGAAATGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: PAFESLQLLLGISYVACWPLMGH*SRNGTV
Trigger: TACTGTGCCATTTCTTGAGCAGTGTCCCATCAGAGG...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCAGCAGGGGGTTGCTTTaGTTCCTGCTGCGGCCCACG +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVASRGLL*FLLRPT
Trigger: CGTGGGCCGCAGCAGGAAGCAAAGCAACCCCCTGCT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCCTCTCGGAAAACTCTTaGCTCCAGCTCCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVLSENS*LQLLFG
Trigger: ACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAG...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGCATGGACGGGTACTaGATGTCATCTGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVSMDGY*MSSASG
Trigger: ACCAGAAGCAGATGACATCCAGTACCCGTCCATGCT...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCTGCAGAATGTTCTTaGCGTCATGGAGGTAGCATA +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEEAAECS*RHGGSI
Trigger: TATGCTACCTCCATGACGTCAAGAACATTCTGCAGC...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATATGAACTTCAGGGAGTaGAGCGGGACCACGCGGTCA +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNMNFRE*SGTTRS
Trigger: TGACCGCGTGGTCCCGCTTCACTCCCTGAAGTTCAT...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATTACACGTCGGGGTACTaGAGGGACAGCATGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNYTSGY*RDSMAG
Trigger: CCCGGCCATGCTGTCCCTTCAGTACCCCGACGTGTA...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGAAGATTAGCCGGGAATaGTGGTATGCGCCTGTAATA +
Preference number: 4 (lower is better)
Translates to: PAFESLQLLLGISYVACWKISRE*WYAPVI
Trigger: TATTACAGGCGCATACCATCATTCCCGGCTAATCTT...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAACCTCTGATGGGACACTaGTCAAGAAATGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEEPLMGH*SRNGTV
Trigger: TACTGTGCCATTTCTTGAGCAGTGTCCCATCAGAGG...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCACTGTAGCCTGTGAGTaGAGGAATAATGTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVTVACE*RNNVPV
Trigger: CACGGGAACATTATTCCTGCACTCACAGGCTACAGT...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGTCCAGGAGTGATCTATaGAGGAGAAACAGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWSRSDL*RRNSLG
Trigger: TCCCAAGCTGTTTCTCCTGCATAGATCACTCCTGGA...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATTCAGGCTCTGCCCATTaGTGCTGTCCTCACCAACCC +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNSGSAH*CCPHQP
Trigger: GGGTTGGTGAGGACAGCAGCAATGGGCAGAGCCTGA...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGCCAGAGTCGGTTTACTaGATCACATCCTTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLPESVY*ITSFPY
Trigger: ATAAGGGAAGGATGTGATCCAGTAAACCGACTCTGG...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGGAATAATGTTCCCGTaGGGAAGCATTATGCCCAGT +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEEGIMFP*GSIMPS
Trigger: ACTGGGCATAATGCTTCCCCACGGGAACATTATTCC...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AAAACTGTGGCAGAAAGGTTAAATGACTTGCCCCACGTGGATTTCAGGCCTGTCCTGATTCCTAATCTGTaGCCTGTGTGGTCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: KTVAERLNDLPHVDFRPVLIPNL*PVWSSP
Trigger: AGGGCTGGACCACACAGGCCACAGATTAGGAATCAG...GACAGGCCTGAAATCCACGTGGGGCAAGTCATTTAACCTTTCTGCCACAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAATCTTTCCTGCCATGCTaGTCAGCAGTTACACCAAAG +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEESFLPC*SAVTPK
Trigger: CTTTGGTGTAACTGCTGACCAGCATGGCAGGAAAGA...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 72 bp ACCTCCACAGCTTTCCAGCCTGTCCTTAACCTGCCTTaGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATG +
Preference number: 4 (lower is better)
Translates to: TSTAFQPVLNLP*SLCNSFWALAM
Trigger: CATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGGTTAAGGACAGGCTGGAAAGCTGTGGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGGCTGCAGAATGTTCTTaGCGTCATGGAGGTAGCATA +
Preference number: 4 (lower is better)
Translates to: DDRVSACNTSYWHTLFPEAAECS*RHGGSI
Trigger: TATGCTACCTCCATGACGTCAAGAACATTCTGCAGC...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ACCTGGTGCCCTATTGGTGACCTCTCATTGCAAAGGAACAGAGACATTCTTCGTCTGGTGCCCTATTGGTaGCCTCTCATTGCAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TWCPIGDLSLQRNRDILRLVPYW*PLIAKE
Trigger: TTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAG...ACGAAGAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR TCA 90 bp AAAACTGTGGCAGAAAGGTTAAATGACTTGCCCCACGTGGATTTCAGGCCTGTCCAGTTTGCCAACTGCTaGTGTAGAACAGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KTVAERLNDLPHVDFRPVQFANC*CRTGAD
Trigger: ATCAGCCCCTGTTCTACATCAGCAGTTGGCAAACTG...GACAGGCCTGAAATCCACGTGGGGCAAGTCATTTAACCTTTCTGCCACAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR TCA 90 bp ACCTGGTGCCCTATTGGTGACCTCTCATTGCAAAGGAACAGAGACATTCTTCGTTCTGACAGAGCTTCTTaGCCCTGTATGTCTTCTCGG +
Preference number: 4 (lower is better)
Translates to: TWCPIGDLSLQRNRDILRSDRAS*PCMSSR
Trigger: CCGAGAAGACATACAGGGTCAAGAAGCTCTGTCAGA...ACGAAGAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR TCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGTCATCAGTTGCTAAGTaGCATTTGGGATTTGAACCC +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLSSVAK*HLGFEP
Trigger: GGGTTCAAATCCCAAATGTCACTTAGCAACTGATGA...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCTTAGCAGGGCCTTGTaGCAAAGCAGTGAGGCCACC +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVALSRAL*QSSEAT
Trigger: GGTGGCCTCACTGCTTTGTCACAAGGCCCTGCTAAG...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGAAGCAACCTGCTCTTTaGATAACCACCCCGCTTTTC +
Preference number: 4 (lower is better)
Translates to: DDRVSACNTSYWHTLFPEKQPAL*ITTPLF
Trigger: GAAAAGCGGGGTGGTTATTCAAAGAGCAGGTTGCTT...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGCGCATAACCTCGGAGTaGCACTGTGCCATCGTCAGA +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRRITSE*HCAIVR
Trigger: TCTGACGATGGCACAGTGGCACTCCGAGGTTATGCG...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGGTCAGGTCATGGAGCTaGAGAATGTTCTTGACGTCA +
Preference number: 4 (lower is better)
Translates to: DDRVSACNTSYWHTLFPEVRSWS*RMFLTS
Trigger: TGACGTCAAGAACATTCTGCAGCTCCATGACCTGAC...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGTGTACCCTACAATGCTaGCGACATCGAGCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRCTLQC*RHRAGR
Trigger: CCTTCCCGCTCGATGTCGGCAGCATTGTAGGGTACA...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATCGCTGTACCCTACAATaGTGCCGACATCGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNRCTLQ*CRHRAG
Trigger: TCCCGCTCGATGTCGGCAGCATTGTAGGGTACAGCG...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGAAGATACCACCTTTATaGCACGTCTCTCCATATTCG +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLKIPPL*HVSPYS
Trigger: CGAATATGGAGAGACGTGGCATAAAGGTGGTATCTT...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTGGTTACTGCCCTGCCTaGCCACCTCCTGGCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFGYCPA*PPPGWG
Trigger: TCCCCAGCCAGGAGGTGGGCAGGCAGGGCAGTAACC...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCTCTTTCAAGCACATCTaGAAGCTCTTTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVSFKHI*KLFGTI
Trigger: GATGGTGCCAAAGAGCTTCCAGATGTGCTTGAAAGA...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTAGTGCTTGCAGCGGGTaGCACAGGGTAAACATGAGC +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSSACSG*HRVNMS
Trigger: GCTCATGTTTACCCTGTGCCACCCGCTGCAAGCACT...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATCCTGGCTGGGGAACTTaGACCTTTGCCAAATGGGGA +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNPGWGT*TFAKWG
Trigger: TCCCCATTTGGCAAAGGTCCAAGTTCCCCAGCCAGG...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTGATTGTCACCCAGTCTaGGCCACTGGCACTCAGACC +
Preference number: 4 (lower is better)
Translates to: TLATGTLCFQRSYGESYTDCHPV*ATGTQT
Trigger: GGTCTGAGTGCCAGTGGCTCAGACTGGGTGACAATC...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGATGTGTAACCTTCCTTaGTCAGATACTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: DDRVSACNTSYWHTLFPEMCNLP*SDTQQH
Trigger: GTGCTGCTGAGTATCTGATCAAGGAAGGTTACACAT...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATCATCATGGTCAGCAGTaGGGAGCAGCATGGACGGGT +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNHHGQQ*GAAWTG
Trigger: ACCCGTCCATGCTGCTCCTCACTGCTGACCATGATG...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGGGATCCAAGGAACTCTaGTTTCTAGGAATACTTTGT +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLGSKEL*FLGILC
Trigger: ACAAAGTATTCCTAGAAATCAGAGTTCCTTGGATCC...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAAATTCAGGAATTCCCTaGGAATACTTCATGGCGCTT +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEENSGIP*EYFMAL
Trigger: AAGCGCCATGAAGTATTCGCAGGGAATTCCTGAATT...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR GCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGTGCTTTGCTTCCTGCTaGGGCCCACGATGTACTGAA +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRCFASC*GPRCTE
Trigger: TTCAGTACATCGTGGGCCGCAGCAGGAAGCAAAGCA...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp TGTCTGACAGAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTCTATCATGCAACCACTCTAAGTaGCAAAGCAACCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: CLTELLDPVCLLGPVCLSCNHSK*QSNHRQ
Trigger: TTGCCTGTGGTTGCTTTGGCACTTAGAGTGGTTGCA...TGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTCTGTCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR GCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGCCATGTGTGTGTAGCTaGTTAAGCTTTAGTGGGAGT +
Preference number: 4 (lower is better)
Translates to: DDRVSACNTSYWHTLFPEPCVCS*LSFSGS
Trigger: ACTCCCACTAAAGCTTAAGCAGCTACACACACATGG...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATTCCTGCCTCAGGCTCTaGCCATTGCTGCTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNSCLRL*PLLLSS
Trigger: TGAGGACAGCAGCAATGGGCAGAGCCTGAGGCAGGA...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATTTCCCTAGGCTCTCCTaGTGTCAGTTTCCCACAGTG +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNFPRLS*CQFPTV
Trigger: CACTGTGGGAAACTGACAGCAGGAGAGCCTAGGGAA...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AATAGCATTCCTTCTCACGGACTATTCATTTGCCCCACTTTGTTTCTTCACAGCTTCCCGCGATGCCACTaGATTCCTGCTGTAGGTCAC +
Preference number: 4 (lower is better)
Translates to: NSIPSHGLFICPTLFLHSFPRCH*IPAVGH
Trigger: GTGACCTACAGCAGGAATCCAGTGGCATCGCGGGAA...GCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp GAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTCTATCAAGAATGTTGCTCTCGGAAAACTCTTaGCTCCAGCTCCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: ELLDPVCLLGPVCLSRMLLSENS*LQLLFG
Trigger: ACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAG...CAACATTCTTGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTCTATCACTTTGGCTGTaGGCTTCCCCGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFLSLWL*ASPPRG
Trigger: GCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAG...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAATTGCTAAGTGACATTTaGGATTTGAACCCAGTCCTG +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEELLSDI*DLNPVL
Trigger: CAGGACTGGGTTCAAATCCCAAATGTCACTTAGCAA...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATTGGGCATTAGCTATGTaGCCTGCTGGGAACTTCCAG +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNWALAM*PAGNFQ
Trigger: CTGGAAGTTCCCAGCAGGCCACATAGCTAATGCCCA...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTTCCTGTGTCCTCACATaGTGGAAGGGATGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVSCVLT*WKGWGG
Trigger: CCCGCCCCATCCCTTCCACCATGTGAGGACACAGGA...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTAAGAGGTCAGGTCTCTaGTTTGCACAAGCAGCCACT +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSKRSGL*FAQAAT
Trigger: AGTGGCTGCTTGTGCAAATCAGAGACCTGACCTCTT...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATCGGCCCACGATGTACTaGAGGGTGGCAATGAACTTC +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNRPTMY*RVAMNF
Trigger: GAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCG...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATTCAGGCACCGCGCGATaGACGCAAACATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNSGTAR*TQTCLR
Trigger: TCTCAGACATGTTTGCGTTCATCGCGCGGTGCCTGA...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGAAGTATGCCCGACTATaGTCCTTAATTCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWKYARL*SLIQQS
Trigger: AGATTGCTGAATTAAGGATCATAGTCGGGCATACTT...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp CCTGGTGCCCTATTGGTGACCTCTCATTGCAAAGGAACAGAGACATTCTTCGTCTCACAAACAATGTTCTaGTTCCTAATCTGTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PGALLVTSHCKGTETFFVSQTMF*FLICGL
Trigger: CAGGCCACAGATTAGGAATCAGAACATTGTTTGTGA...GACGAAGAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR GCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTCGCTGTACCCTACAATaGTGCCGACATCGAGCGGGA +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVRCTLQ*CRHRAG
Trigger: TCCCGCTCGATGTCGGCAGCATTGTAGGGTACAGCG...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGCGTGGGGAAGCATTATaGCCAGTGGTTTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRRGEAL*PVVSWC
Trigger: ACACCAAGAAACCACTGGGCATAATGCTTCCCCACG...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGAGCTGTCTTTCAATATaGTTGGTATGCAGTGATATG +
Preference number: 4 (lower is better)
Translates to: RGKALEVFCRCQEEARKLSCLSI*LVCSDM
Trigger: CATATCACTGCATACCAAGCATATTGAAAGACAGCT...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTGACAGAGTCTCAGCATaGAACACTAGCTACTGGCAC +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSDRVSA*NTSYWH
Trigger: GTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTC...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGATTTTCTTTCTTTCCTaGCATGCTGGTCAGCAGTTA +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWIFFLS*HAGQQL
Trigger: TAACTGCTGACCAGCATGGCAGGAAAGAAAGAAAAT...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGTCCATTACTCCAACTTaGGCAATAACACAACCAAAG +
Preference number: 4 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWSITPT*AITQPK
Trigger: CTTTGGTTGTGTTATTGCCCAAGTTGGAGTAATGGA...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATGCCTTGGTGTCCACGTaGATAAGCAGGGGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNALVST*ISRGLL
Trigger: AAGCAACCCCCTGCTTATCCACGTGGACACCAAGGC...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCATTGCACTCCAGCCTaGGCCGTAACAGCAAAACTC +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVAHCTPA*AVTAKL
Trigger: GAGTTTTGCTGTTACGGCCCAGGCTGGAGTGCAATG...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATGCTTTCATCTCTCAGTaGCTTCACCTGACTGAGCTG +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNAFISQ*LHLTEL
Trigger: CAGCTCAGTCAGGTGAAGCCACTGAGAGATGAAAGC...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATATTCACCATCTTCGCTaGACGCATAACCTCGGAGTG +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNIHHLR*THNLGV
Trigger: CACTCCGAGGTTATGCGTTCAGCGAAGATGGTGAAT...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCATCATGGTCAGCAGTaGGGAGCAGCATGGACGGGT +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIHHGQQ*GAAWTG
Trigger: ACCCGTCCATGCTGCTCCTCACTGCTGACCATGATG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTACGTGGGAAAGCCCTTaGGGTTTTCTGTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: TLATGTLCFQRSYGESYTTWESP*GFLSLS
Trigger: TGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGT...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGATAATTTACTCATGTaGTCTCTTGGAACCAAGGAT +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEEDNLLM*SLGTKD
Trigger: ATCCTTGGTTCCAAGAGATCACATGAGTAAATTATC...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTCTTGTGACAAAGCAGTaGGGCCACCTGTGCAACATG +
Preference number: 4 (lower is better)
Translates to: TLATGTLCFQRSYGESYTLVTKQ*GHLCNM
Trigger: CATGTTGCACAGGTGGCCTCACTGCTTTGTCACAAG...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTACCTTGAGAGACTGGTaGCAGGCTTCCTTAGTTGAA +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSTLRDW*QASLVE
Trigger: TTCAACTAAGGAAGCCTGTCACCAGTCTCTCAAGGT...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCTCAGTGGCTTCACCTaGCTGAGCTGCCTGCCATCT +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLILSGFT*LSCLPS
Trigger: AGATGGCAGGCAGCTCAGTCAGGTGAAGCCACTGAG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGGTCAGGTCATGGAGCTaGAGAATGTTCTTGACGTCA +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRVRSWS*RMFLTS
Trigger: TGACGTCAAGAACATTCTGCAGCTCCATGACCTGAC...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATTCTGATGTTGGCCACTaGCAGGATACCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNSDVGH*QDTTHV
Trigger: CACATGGGTGGTATCCTGGCAGTGGCCAACATCAGA...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTTCTGATGTTGGCCACTaGCAGGATACCACCCATGTG +
Preference number: 4 (lower is better)
Translates to: TLATGTLCFQRSYGESYTSDVGH*QDTTHV
Trigger: CACATGGGTGGTATCCTGGCAGTGGCCAACATCAGA...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGCTTTCTTTCCTGCCATaGTGGTCAGCAGTTACACCA +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRLSFLP*WSAVTP
Trigger: TGGTGTAACTGCTGACCAGCATGGCAGGAAAGAAAG...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATACAAATGCTCTGGTGTaGTTAGCAGGGCCTTGTGAC +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNTNALV*LAGPCD
Trigger: GTCACAAGGCCCTGCTAAGCACACCAGAGCATTTGT...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTTTCCCGCGATGCCACTaGATTCCTGCTGTAGGTCAC +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVFPRCH*IPAVGH
Trigger: GTGACCTACAGCAGGAATCCAGTGGCATCGCGGGAA...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATACACCGTCCCCTCATTaGTCACGTAGTCATATTCCC +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNTPSPH*SRSHIP
Trigger: GGGAATATGACTACGTGACCAATGAGGGGACGGTGT...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTCTCTCGGAAAACTCTTaGCTCCAGCTCCTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPLSENS*LQLLFG
Trigger: ACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAG...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAATGCACAATGAACATTaGAATCTTCGTACCATCCTT +
Preference number: 4 (lower is better)
Translates to: SWCQRGKALEVFCRCQEEMHNEH*NLRTIL
Trigger: AAGGATGGTACGAAGATTCCAATGTTCATTGTGCAT...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATAGCACCCATAATCAGTaGTCCAAGCATGGCCGATGG +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNSTHNQ*SKHGRW
Trigger: CCATCGGCCATGCTTGGACCACTGATTATGGGTGCT...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCTTCCTCTATCACTTTaGCTGTGGGCTTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLILPLSL*LWASPP
Trigger: GGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTCTTCCTCTATCACTTTaGCTGTGGGCTTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFLPLSL*LWASPP
Trigger: GGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAG...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR CAA 72 bp CCTCCTCCTCATCAGTTGCTAAGTGACATTTGGGATTaGAACCCAGTCCTGATATCTGAAGCTCACACACTA +
Preference number: 4 (lower is better)
Translates to: PPPHQLLSDIWD*NPVLISEAHTL
Trigger: TAGTGTGTGAGCTTCAGATATCAGGACTGGGTTCAAATCCCAAATGTCACTTAGCAACTGATGAGGAGGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATCCAAGAAGTTGGACCTaGCACAAGCTATCCATTCTA +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNPRSWT*HKLSIL
Trigger: TAGAATGGATAGCTTGTGTCAGGTCCAACTTCTTGG...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGTATAAGAAAGCTGGATaGGAGCCATCCAATTTTATG +
Preference number: 4 (lower is better)
Translates to: DDRVSACNTSYWHTLFPEYKKAG*EPSNFM
Trigger: CATAAAATTGGATGGCTCTCATCCAGCTTTCTTATA...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTGGTCAATATGGTAAGTaGAATAAGCCAGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSGQYGK*NKPGTG
Trigger: TCCTGTGCCTGGCTTATTTCACTTACCATATTGACC...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCACCACCCCAACAGTATaGCCTTTGCCTCTTTACAGC +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCTTPTV*PLPLYS
Trigger: GCTGTAAAGAGGCAAAGGTCATACTGTTGGGGTGGT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTGGAATATCAACTGGATaGGGGCAGGACATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSGISTG*GQDIFS
Trigger: AGAGAAAATGTCCTGCCCTCATCCAGTTGATATTCC...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTGGCAGGAGAATCACGTaGACCCAAGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFGRRIT*TQEVEV
Trigger: AACCTCCACCTCTTGGGTTCACGTGATTCTCCTGCC...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTCGCATAACCTCGGAGTaGCACTGTGCCATCGTCAGA +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFRITSE*HCAIVR
Trigger: TCTGACGATGGCACAGTGGCACTCCGAGGTTATGCG...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTTCAGGATTCCCGCGATaGCACTGGATTCCTGCTGTA +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVSGFPR*HWIPAV
Trigger: TACAGCAGGAATCCAGTGGCATCGCGGGAATCCTGA...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCACTGTAGCCTGTGAGTaGAGGAATAATGTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVATVACE*RNNVPV
Trigger: CACGGGAACATTATTCCTGCACTCACAGGCTACAGT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCAGACCAGCCACAGTATaGCTGAAGACGAGAGTGAAT +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVARPATV*LKTRVN
Trigger: ATTCACTCTCGTCTTCAGCCATACTGTGGCTGGTCT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR CCA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGACATATAATACTCGCTaGTTCTGCAAACCTGTATTG +
Preference number: 4 (lower is better)
Translates to: DDRVSACNTSYWHTLFPETYNTR*FCKPVL
Trigger: CAATACAGGTTTGCAGAACCAGCGAGTATTATATGT...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTCGTCAGACAGTATGTTaGGGTCCAGGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVRQTVC*GPGTLW
Trigger: CCAGAGTGTTCCTGGACCCCAACATACTGTCTGACG...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATCCAGAGTCGGTTTACTaGATCACATCCTTCCCTTAT +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNPESVY*ITSFPY
Trigger: ATAAGGGAAGGATGTGATCCAGTAAACCGACTCTGG...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATCCAGTAGTCAGGTCATaGAGCTGCAGAATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNPVVRS*SCRMFL
Trigger: CAAGAACATTCTGCAGCTCCATGACCTGACTACTGG...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTGCCTTGGTGTCCACGTaGATAAGCAGGGGGTTGCTT +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFALVST*ISRGLL
Trigger: AAGCAACCCCCTGCTTATCCACGTGGACACCAAGGC...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGGGAACCAAGGATCCTTaGATCCAAGGAACTCTGATT +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRGTKDP*IQGTLI
Trigger: AATCAGAGTTCCTTGGATCCAAGGATCCTTGGTTCC...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGTGCAACACTAGCTACTaGCACACTTTGTTTCCAGAG +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRCNTSY*HTLFPE
Trigger: CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCA...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTATGCTCTGGACTCAGTaGGTCCAACTCAGCTATTTG +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPMLWTQ*VQLSYL
Trigger: CAAATAGCTGAGTTGGACCCACTGAGTCCAGAGCAT...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCAAGAGAACTCGTAACTaGAGGCCAATCATGCTAGGC +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVAKRTRN*RPIMLG
Trigger: GCCTAGCATGATTGGCCTCCAGTTACGAGTTCTCTT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGCAGTCCTCATCCCACTaGCCTGACCACCCCAACAGT +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKQSSSH*PDHPNS
Trigger: ACTGTTGGGGTGGTCAGGCCAGTGGGATGAGGACTG...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATCTTTGTATAAACCTCTaGTGGGACACTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNLCINL*WDTAQE
Trigger: TTCTTGAGCAGTGTCCCATCAGAGGTTTATACAAAG...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATATCCTGTTGAGGGTATaGGTTGTAGAACATTCCCTT +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNILLRV*VVEHSL
Trigger: AAGGGAATGTTCTACAACTCATACCCTCAACAGGAT...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAAAATATCTTCTGACTaGTCGGTTCCCAAGACATGG +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRKISSD*SVPKTW
Trigger: CCATGTCTTGGGAACCGATCAGTCAGAAGATATTTT...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTCCAAGAAGTTGGACCTaGCACAAGCTATCCATTCTA +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPPRSWT*HKLSIL
Trigger: TAGAATGGATAGCTTGTGTCAGGTCCAACTTCTTGG...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGTCAGGCACCGCGCGATaGACGCAAACATGTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKSGTAR*TQTCLR
Trigger: TCTCAGACATGTTTGCGTTCATCGCGCGGTGCCTGA...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp GGGAACATCCAGCGCTCTTTATTCTCATCTTCCTTCACAAACAATGTTCTGATTGGCAGAAAGGTTAAATaGCTTGCCCCACGTGGATTT +
Preference number: 4 (lower is better)
Translates to: GNIQRSLFSSSFTNNVLIGRKVK*LAPRGF
Trigger: AAATCCACGTGGGGCAAGTCATTTAACCTTTCTGCC...AATCAGAACATTGTTTGTGAAGGAAGATGAGAATAAAGAGCGCTGGATGTTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR TCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCGATTCTGTGCAACCTTaGAAATGCTCTGGACTCAGT +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVADSVQP*KCSGLS
Trigger: ACTGAGTCCAGAGCATTTTCAAGGTTGCACAGAATC...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATGTGCCCATCAGCAGATaGACAGATGAAGAAAATGTG +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNVPISR*TDEENV
Trigger: CACATTTTCTTCATCTGTTCATCTGCTGATGGGCAC...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAAGATACCACCTTTATaGCACGTCTCTCCATATTCG +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNKIPPL*HVSPYS
Trigger: CGAATATGGAGAGACGTGGCATAAAGGTGGTATCTT...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGGGTTGCTTTGCTTCCTaGTGCGGCCCACGATGTACT +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKGCFAS*CGPRCT
Trigger: AGTACATCGTGGGCCGCAGCAGGAAGCAAAGCAACC...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTCAACAGTATGACCTTTaGCTCTTTACAGCAACCTCC +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPQQYDL*LFTATS
Trigger: GGAGGTTGCTGTAAAGAGGCAAAGGTCATACTGTTG...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCGTCAGACAGTATGTTaGGGTCCAGGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIRQTVC*GPGTLW
Trigger: CCAGAGTGTTCCTGGACCCCAACATACTGTCTGACG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTATTCCCTTCCCATCATaGGTCCAGGCCATACAGCTG +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIIPFPS*VQAIQL
Trigger: CAGCTGTATGGCCTGGACCCATGATGGGAAGGGAAT...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AATAGCATTCCTTCTCACGGACTATTCATTTGCCCCACTTTGTTTCTTCACAGCAAGCATTATGCCCAGTaGTTTCTTGGTGTCAACGTG +
Preference number: 4 (lower is better)
Translates to: NSIPSHGLFICPTLFLHSKHYAQ*FLGVNV
Trigger: CACGTTGACACCAAGAAACCACTGGGCATAATGCTT...GCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTGGAATAATGTTCCCGTaGGGAAGCATTATGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TLATGTLCFQRSYGESYTGIMFP*GSIMPS
Trigger: ACTGGGCATAATGCTTCCCCACGGGAACATTATTCC...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTGCAGGAGAAACAGCTTaGGAAATGCTGAAATTTCTG +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSAGETA*EMLKFL
Trigger: CAGAAATTTCAGCATTTCCCAAGCTGTTTCTCCTGC...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATGAAAGAGGCTGCCTCTaGCTTGACCATGCAAATGTA +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNERGCL*LDHANV
Trigger: TACATTTGCATGGTCAAGCCAGAGGCAGCCTCTTTC...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTAATCCCTTAGAGTTCTaGGTAGGAGCCCAATCTCAA +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPNPLEF*VGAQSQ
Trigger: TTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATT...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCTTTGCAACTCCTTCTaGGCATTAGCTATGTGGCCT +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCLCNSF*ALAMWP
Trigger: AGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAG...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 72 bp TTGATAAACACCTGGTGCCCTATTGGTGACCTCTCATaGCAAAGGAACAGAGACATTCTTCGTCATCATCAA +
Preference number: 4 (lower is better)
Translates to: LINTWCPIGDLS*QRNRDILRHHQ
Trigger: TTGATGATGACGAAGAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAATAGGGCACCAGGTGTTTATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR TCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTCTTTGTATAAACCTCTaGTGGGACACTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPLCINL*WDTAQE
Trigger: TTCTTGAGCAGTGTCCCATCAGAGGTTTATACAAAG...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATACACAAAATATCTTCTaGCTGATCGGTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNTQNIF*LIGSQD
Trigger: GTCTTGGGAACCGATCAGTCAGAAGATATTTTGTGT...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCACACAAAATATCTTCTaGCTGATCGGTTCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVATQNIF*LIGSQD
Trigger: GTCTTGGGAACCGATCAGTCAGAAGATATTTTGTGT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAGTGTCCTTCTTCTaGCCGCTGTACCCTACAATG +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFSVSFF*PLYPTM
Trigger: CATTGTAGGGTACAGCGGTCAGAAGAAGGACACTGA...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCATGTGTAACCTTCCTTaGTCAGATACTCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCMCNLP*SDTQQH
Trigger: GTGCTGCTGAGTATCTGATCAAGGAAGGTTACACAT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATGAACGCAAACATGTCTaGGACTTCCTCTATCACTTT +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNERKHV*DFLYHF
Trigger: AAAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTC...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGACGTGGGAAAGCCCTTaGGGTTTTCTGTCGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKTWESP*GFLSLS
Trigger: TGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGT...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTGGATCCAAGGAACTCTaGTTTCTAGGAATACTTTGT +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSGSKEL*FLGILC
Trigger: ACAAAGTATTCCTAGAAATCAGAGTTCCTTGGATCC...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp TCATCTTCCTTCACAAACAATGTTCTGATTCCTAATCTGTGGCCTGTGTGGTCCTCATCAATCAACCAGTaGTTCAGTTTCTGGAAGACT +
Preference number: 4 (lower is better)
Translates to: SSSFTNNVLIPNLWPVWSSSINQ*FSFWKT
Trigger: AGTCTTCCAGAAACTGAATCACTGGTTGATTGATGA...GGACCACACAGGCCACAGATTAGGAATCAGAACATTGTTTGTGAAGGAAGATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR TCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCAAAACTGACAAACCTTaGGAGACTGGTGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCKTDKP*ETGDRL
Trigger: AAGCCTGTCACCAGTCTCTCAAGGTTTGTCAGTTTT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTTTCAGGACATTCAGCTaGTATGGTTCCTTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPFRTFS*YGSLCY
Trigger: GTAACACAAGGAACCATAGCAGCTGAATGTCCTGAA...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR GCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGATTCAAAGTGTTGTTTaGTGTCCGAGCACCCATAAT +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRIQSVV*CPSTHN
Trigger: ATTATGGGTGCTCGGACAGCAAACAACACTTTGAAT...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTATTCAAAGTGTTGTTTaGTGTCCGAGCACCCATAAT +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSIQSVV*CPSTHN
Trigger: ATTATGGGTGCTCGGACAGCAAACAACACTTTGAAT...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGTGCTTTGCTTCCTGCTaGGGCCCACGATGTACTGAA +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKCFASC*GPRCTE
Trigger: TTCAGTACATCGTGGGCCGCAGCAGGAAGCAAAGCA...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTCGTGGGGAAGCATTATaGCCAGTGGTTTCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFRGEAL*PVVSWC
Trigger: ACACCAAGAAACCACTGGGCATAATGCTTCCCCACG...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATGGGAACTTGGACCTTTaGCAAATGGGGAAAAGGTAT +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNGNLDL*QMGKRY
Trigger: ATACCTTTTCCCCATTTGGCAAAGGTCCAAGTTCCC...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATGTCAACAACAGAAATTaGTCTCTCACAGTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNVNNRN*SLTVLE
Trigger: CTCTAGGACTGTGAGAGAGCAATTTCTGTTGTTGAC...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTCATTTTGGGATCCTCTaGCCAGTAGATAGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFHFGIL*PVDRQA
Trigger: TGCCTGCCTATCTACTGGCCAGAGGATCCCAAAATG...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR CCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATACAGTAATCTTATTCTaGGCCTCCACAAAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNTVILF*ASTKAL
Trigger: TAAGGCCTTTGTGGAGGCCCAGAATAAGATTACTGT...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATTCCATTACTCCAACTTaGGCAATAACACAACCAAAG +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNSITPT*AITQPK
Trigger: CTTTGGTTGTGTTATTGCCCAAGTTGGAGTAATGGA...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTAGCATGGACGGGTACTaGATGTCATCTGCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLISMDGY*MSSASG
Trigger: ACCAGAAGCAGATGACATCCAGTACCCGTCCATGCT...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCAAGCATTATGCCCAGTaGTTTCTTGGTGTCAACGTG +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCKHYAQ*FLGVNV
Trigger: CACGTTGACACCAAGAAACCACTGGGCATAATGCTT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATGGAACCAAGGATCCTTaGATCCAAGGAACTCTGATT +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNGTKDP*IQGTLI
Trigger: AATCAGAGTTCCTTGGATCCAAGGATCCTTGGTTCC...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AGACAATTGAAGGGTAATTCACCAAGCTATAATAATGCCCTAGTTTCACAGAAAAAGACTCAGTACCCTTaGGGAGCTGGACTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: RQLKGNSPSYNNALVSQKKTQYP*GAGLSG
Trigger: ACCAGACAGTCCAGCTCCCCAAGGGTACTGAGTCTT...TTTCTGTGAAACTAGGGCATTATTATAGCTTGGTGAATTACCCTTCAATTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTTGGACCTTTGCCAAATaGGGAAAAGGTATTATGTGC +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPWTFAK*GKGIMC
Trigger: GCACATAATACCTTTTCCCCATTTGGCAAAGGTCCA...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAAGTGCTCTCATTTCTaGAGAATCGTTCTATTCTTC +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRKCSHF*RIVLFF
Trigger: GAAGAATAGAACGATTCTTCAGAAATGAGAGCACTT...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR TCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTCCTTGGCCTTCTCAATaGTGGTCTGGATTACTCTAC +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFPWPSQ*WSGLLY
Trigger: GTAGAGTAATCCAGACCATCATTGAGAAGGCCAAGG...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR TCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATCTCTGTGAGAGTTTTTaGAACATCCCAAAGCCCAAT +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNLCESF*NIPKPN
Trigger: ATTGGGCTTTGGGATGTTTCAAAAACTCTCACAGAG...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR TCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGCCGATGGTATATTTATaGAACTTCAGCATGTCCATT +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRPMVYL*NFSMSI
Trigger: AATGGACATGCTGAAGTTTCATAAATATACCATCGG...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAAGACATCTTTCTCATaGTCAGGAACAAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNKTSFS*SGTSTF
Trigger: GAAAGTACTTGTTCCTGAGCATGAGAAAGATGTCTT...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTGGAAAAGGTATTATGTaGTTCCTAAGGTTGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPGKGIM*FLRLCE
Trigger: CTCACACAACCTTAGGAAGCACATAATACCTTTTCC...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCTGACTGGTCATTTTaGGATCCTCTGGCCAGTAGA +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFSDWSF*DPLASR
Trigger: TCTACTGGCCAGAGGATCCCAAAATGACCAGTCAGA...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGTCATCAGCCATATATaGTGCTGTCACGGATGTGTA +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVVISHI*CCHGCV
Trigger: TACACATCCGTGACAGCACCATATATGGCTGATGAC...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCGACATTCAGCTGCTATaGTTCCTTGTGTTACTTCTG +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCDIQLL*FLVLLL
Trigger: CAGAAGTAACACAAGGAACCATAGCAGCTGAATGTC...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR CCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATACAGTAATCTTATTCTaGGCCTCCACAAAGGCCTTA +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNTVILF*ASTKAL
Trigger: TAAGGCCTTTGTGGAGGCCCAGAATAAGATTACTGT...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCCAGTAGTCAGGTCATaGAGCTGCAGAATGTTCTTG +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIPVVRS*SCRMFL
Trigger: CAAGAACATTCTGCAGCTCCATGACCTGACTACTGG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATTCCAAGCATGGCCGATaGTATATTTATGAAACTTCA +
Preference number: 4 (lower is better)
Translates to: KIKFPRQFCSTVACECRNSKHGR*YIYETS
Trigger: TGAAGTTTCATAAATATACCATCGGCCATGCTTGGA...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGCTTCACATTATGCAATaGAGAGTATTTGACAAGCCA +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRLHIMQ*RVFDKP
Trigger: TGGCTTGTCAAATACTCTCCATTGCATAATGTGAAG...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCACTCATGTGATCTCTTaGAACCAAGGATCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCTHVIS*NQGSLD
Trigger: ATCCAAGGATCCTTGGTTCCAAGAGATCACATGAGT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp CAGCGCTCTTTATTCTCATCTTCCTTCACAAACAATGTTCTGATTCCTAATCTGTTCACAGAAACATTGTaGGGAACATCCAGCGCTCTT +
Preference number: 4 (lower is better)
Translates to: QRSLFSSSFTNNVLIPNLFTETL*GTSSAL
Trigger: AAGAGCGCTGGATGTTCCCCACAATGTTTCTGTGAA...CAGATTAGGAATCAGAACATTGTTTGTGAAGGAAGATGAGAATAAAGAGCGCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CCA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTGTCTTTCAATATGCTTaGTATGCAGTGATATGCTTG +
Preference number: 4 (lower is better)
Translates to: GSNREESLRVLGRSPISSVFQYA*YAVICL
Trigger: CAAGCATATCACTGCATACCAAGCATATTGAAAGAC...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTCATCTGTCTCCTCCCTaGAATATCAACTGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFHLSPP*NINWMR
Trigger: CCTCATCCAGTTGATATTCCAGGGAGGAGACAGATG...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATGATCACAGTGATAAATaGTACCTGGAGATAAAAAGG +
Preference number: 4 (lower is better)
Translates to: IKFPRQFCSTVACECRNNDHSDK*YLEIKR
Trigger: CCTTTTTATCTCCAGGTATCATTTATCACTGTGATC...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATGCAATGGAGAGTATTTaGCAAGCCATTCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNAMESI*QAIQSV
Trigger: AACACTTTGAATGGCTTGTCAAATACTCTCCATTGC...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCGCAATGGAGAGTATTTaGCAAGCCATTCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCAMESI*QAIQSV
Trigger: AACACTTTGAATGGCTTGTCAAATACTCTCCATTGC...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTAATTTTCCAGCCCAGTaGTTTTTGAAAGGAGGCATC +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVNFPAQ*FLKGGI
Trigger: GATGCCTCCTTTCAAAAATCACTGGGCTGGAAAATT...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp GGGAACATCCAGCGCTCTTTATTCTCATCTTCCTTCACAAACAATGTTCTGATTCCATTTCTAGACAATTaGAGGGTAATTCACCAAGCT +
Preference number: 4 (lower is better)
Translates to: GNIQRSLFSSSFTNNVLIPFLDN*RVIHQA
Trigger: AGCTTGGTGAATTACCCTTCAATTGTCTAGAAATGG...AATCAGAACATTGTTTGTGAAGGAAGATGAGAATAAAGAGCGCTGGATGTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR TCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTTTCTATTTCCAGGAGTaGTCTATGCAGGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVFYFQE*SMQEKQ
Trigger: CTGTTTCTCCTGCATAGATCACTCCTGGAAATAGAA...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTTTCCACTACTGGGTATaGATCCAAAAGAAAGGAAAT +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPFHYWV*IQKKGN
Trigger: ATTTCCTTTCTTTTGGATTCATACCCAGTAGTGGAA...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCTGAGATATGGAGGATaGGAATGGCTCAATGTTCCT +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLILRYGG*EWLNVP
Trigger: AGGAACATTGAGCCATTCTCATCCTCCATATCTCAG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCAAGACATCTTTCTCATaGTCAGGAACAAGTACTTTC +
Preference number: 4 (lower is better)
Translates to: CRKVKCFILTENSTSGVAKTSFS*SGTSTF
Trigger: GAAAGTACTTGTTCCTGAGCATGAGAAAGATGTCTT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCACACACTGTATTTTCTaGTGTAAAGCAGACCTCAGA +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCTHCIF*CKADLR
Trigger: TCTGAGGTCTGCTTTACAGCAGAAAATACAGTGTGT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTTATCAAAAAGATATCTaGACTCCTGTGTCTACTGCA +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPYQKDI*TPVSTA
Trigger: TGCAGTAGACACAGGAGTGCAGATATCTTTTTGATA...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAGTGGCAACTATACTTaGGATAATCATATAGTTCAG +
Preference number: 4 (lower is better)
Translates to: KKIKFPRQFCSTVACECRSGNYT*DNHIVQ
Trigger: CTGAACTATATGATTATCCCAAGTATAGTTGCCACT...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTCTTTCAAGCACATCTaGAAGCTCTTTGGCACCATC +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLISFKHI*KLFGTI
Trigger: GATGGTGCCAAAGAGCTTCCAGATGTGCTTGAAAGA...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTTCCAAGCATGGCCGATaGTATATTTATGAAACTTCA +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPSKHGR*YIYETS
Trigger: TGAAGTTTCATAAATATACCATCGGCCATGCTTGGA...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTCTTCACATTATGCAATaGAGAGTATTTGACAAGCCA +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPLHIMQ*RVFDKP
Trigger: TGGCTTGTCAAATACTCTCCATTGCATAATGTGAAG...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTCACGAAAACTGTTTATaGAATCCAGTCGACGTTCAG +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVHENCL*NPVDVQ
Trigger: CTGAACGTCGACTGGATTCCATAAACAGTTTTCGTG...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTACTCATGTGATCTCTTaGAACCAAGGATCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVTHVIS*NQGSLD
Trigger: ATCCAAGGATCCTTGGTTCCAAGAGATCACATGAGT...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGTCAGCCCCTGAGATATaGAGGATGAGAATGGCTCAA +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKSAPEI*RMRMAQ
Trigger: TTGAGCCATTCTCATCCTCCATATCTCAGGGGCTGA...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
3UTR CAA 72 bp GTGCAACCGTTACTGAAATCCAGTTTTAGAACATTTTaGTCATCCCGGTTAGATCCTTTATGCCCAAGTAGT +
Preference number: 4 (lower is better)
Translates to: VQPLLKSSFRTF*SSRLDPLCPSS
Trigger: ACTACTTGGGCATAAAGGATCTAACCGGGATGACAAAAATGTTCTAAAACTGGATTTCAGTAACGGTTGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTATCCTGTTGAGGGTATaGGTTGTAGAACATTCCCTT +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIILLRV*VVEHSL
Trigger: AAGGGAATGTTCTACAACTCATACCCTCAACAGGAT...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTAAAATATCTTCTGACTaGTCGGTTCCCAAGACATGG +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFKISSD*SVPKTW
Trigger: CCATGTCTTGGGAACCGATCAGTCAGAAGATATTTT...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCGATCACAGTGATAAATaGTACCTGGAGATAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCDHSDK*YLEIKR
Trigger: CCTTTTTATCTCCAGGTATCATTTATCACTGTGATC...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCGATAATTTACTCATGTaGTCTCTTGGAACCAAGGAT +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCDNLLM*SLGTKD
Trigger: ATCCTTGGTTCCAAGAGATCACATGAGTAAATTATC...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGAGCCATGAAAAAGACTaGGATCCTGTCATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKSHEKD*DPVICS
Trigger: GCTGCAAATGACAGGATCTCAGTCTTTTTCATGGCT...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTACAGGCTTCCTTAGTTaGAACTTATCCTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: TLATGTLCFQRSYGESYTTGFLS*NLSFSN
Trigger: GTTTGAAAAGGATAAGTTTCAACTAAGGAAGCCTGT...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTGGTAACTTCACATTATaGAATGGAGAGTATTTGACA +
Preference number: 4 (lower is better)
Translates to: RKVKCFILTENSTSGVAPGNFTL*NGEYLT
Trigger: TGTCAAATACTCTCCATTGCATAATGTGAAGTTACC...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp AGACAATTGAAGGGTAATTCACCAAGCTATAATAATGCCCTAGTTTCACAGAAATTGATAAACACCTGGTaGCCTATTGGTGACCTCTCA +
Preference number: 4 (lower is better)
Translates to: RQLKGNSPSYNNALVSQKLINTW*PIGDLS
Trigger: TGAGAGGTCACCAATAGGGCACCAGGTGTTTATCAA...TTTCTGTGAAACTAGGGCATTATTATAGCTTGGTGAATTACCCTTCAATTGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCACGAAAACTGTTTATaGAATCCAGTCGACGTTCAG +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIHENCL*NPVDVQ
Trigger: CTGAACGTCGACTGGATTCCATAAACAGTTTTCGTG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp AATAGCATTCCTTCTCACGGACTATTCATTTGCCCCACTTTGTTTCTTCACAGCTTTTACCCAACTAAGTaGTCAGTGTTTGTTTATGAC +
Preference number: 4 (lower is better)
Translates to: NSIPSHGLFICPTLFLHSFYPTK*SVFVYD
Trigger: GTCATAAACAAACACTGACCACTTAGTTGGGTAAAA...GCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCGAAAATACCATAAACTaGTGGGTTGTCAACAACAGA +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCENTIN*WVVNNR
Trigger: TCTGTTGTTGACAACCCACCAGTTTATGGTATTTTC...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp AACAGCTTGGGAAATGCTGAAATTTCTGACTGTAAGAAATGCTTGGATATATGTGAACGCAAACATGTCTaGGACTTCCTCTATCACTTT +
Preference number: 4 (lower is better)
Translates to: NSLGNAEISDCKKCLDICERKHV*DFLYHF
Trigger: AAAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTC...ACATATATCCAAGCATTTCTTACAGTCAGAAATTTCAGCATTTCCCAAGCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTAAGTATGCCCGACTATaGTCCTTAATTCAGCAATCT +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIKYARL*SLIQQS
Trigger: AGATTGCTGAATTAAGGATCATAGTCGGGCATACTT...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR GCA 90 bp AGACAATTGAAGGGTAATTCACCAAGCTATAATAATGCCCTAGTTTCACAGAAATTGGTGACCTCTCATTaGAAAGGAACAGAGACATTC +
Preference number: 4 (lower is better)
Translates to: RQLKGNSPSYNNALVSQKLVTSH*KGTETF
Trigger: GAATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAA...TTTCTGTGAAACTAGGGCATTATTATAGCTTGGTGAATTACCCTTCAATTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCAGTGGCAACTATACTTaGGATAATCATATAGTTCAG +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCSGNYT*DNHIVQ
Trigger: CTGAACTATATGATTATCCCAAGTATAGTTGCCACT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTACATATAATACTCGCTaGTTCTGCAAACCTGTATTG +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVTYNTR*FCKPVL
Trigger: CAATACAGGTTTGCAGAACCAGCGAGTATTATATGT...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCATACAACTTGGAAGATaGGACTTACTTGGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCIQLGR*DLLGKV
Trigger: TACTTTTCCAAGTAAGTCCCATCTTCCAAGTTGTAT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTAGACCTCAGAAAGTATaGTTAGATTCTGTGCAACCT +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIRPQKV*LDSVQP
Trigger: AGGTTGCACAGAATCTAACCATACTTTCTGAGGTCT...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTCCAGTCATTTGTGTCTaGCTTCTTTCACTTATAATG +
Preference number: 4 (lower is better)
Translates to: CCRKVKCFILTENSTSGVPVICV*LLSLIM
Trigger: CATTATAAGTGAAAGAAGCCAGACACAAATGACTGG...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTATAAGAAAGCTGGATaGGAGCCATCCAATTTTATG +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIYKKAG*EPSNFM
Trigger: CATAAAATTGGATGGCTCTCATCCAGCTTTCTTATA...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTAAGAAGTCTTCTCCATaGGAACAGTTCTCACATTTA +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIKKSSP*EQFSHL
Trigger: TAAATGTGAGAACTGTTCTCATGGAGAAGACTTCTT...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR TCA 90 bp AACAGCTTGGGAAATGCTGAAATTTCTGACTGTAAGAAATGCTTGGATATATGTCAGCATTTCCCAAACTaGTACTCAAAGGAACATTGT +
Preference number: 4 (lower is better)
Translates to: NSLGNAEISDCKKCLDICQHFPN*YSKEHC
Trigger: ACAATGTTCCTTTGAGTATCAGTTTGGGAAATGCTG...ACATATATCCAAGCATTTCTTACAGTCAGAAATTTCAGCATTTCCCAAGCTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp AACAGCTTGGGAAATGCTGAAATTTCTGACTGTAAGAAATGCTTGGATATATGTCCAGAGGAGTTATGGTaGATCTTATACTCAATGACA +
Preference number: 4 (lower is better)
Translates to: NSLGNAEISDCKKCLDICPEELW*ILYSMT
Trigger: TGTCATTGAGTATAAGATTCACCATAACTCCTCTGG...ACATATATCCAAGCATTTCTTACAGTCAGAAATTTCAGCATTTCCCAAGCTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR TCA 90 bp ATCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTCAGCAGATGAACAGATaGAGAAAATGTGGTACATAT +
Preference number: 4 (lower is better)
Translates to: ITSNKQTNKGDRVDEQLIQQMNR*RKCGTY
Trigger: ATATGTACCACATTTTCTTCATCTGTTCATCTGCTG...AATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTGGTAACTTCACATTATaGAATGGAGAGTATTTGACA +
Preference number: 4 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFGNFTL*NGEYLT
Trigger: TGTCAAATACTCTCCATTGCATAATGTGAAGTTACC...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGATGCACAATGAACATTaGAATCTTCGTACCATCCTT +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKMHNEH*NLRTIL
Trigger: AAGGATGGTACGAAGATTCCAATGTTCATTGTGCAT...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
3UTR CAA 72 bp CAGGATATTTCACTTAATCAGACTATACCCAGTCATTaGTGTCTGGCTTCTTTCACTTATAATGTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: QDISLNQTIPSH*CLASFTYNVFE
Trigger: CTCAAAAACATTATAAGTGAAAGAAGCCAGACACAAATGACTGGGTATAGTCTGATTAAGTGAAATATCCTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR GCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGTCAATATGCTTGGTATaGAGTGATATGCTTGATAGA +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKSICLV*SDMLDR
Trigger: TCTATCAAGCATATCACTGCATACCAAGCATATTGA...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CCA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGTTTTACCCAACTAAGTaGTCAGTGTTTGTTTATGAC +
Preference number: 4 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKFYPTK*SVFVYD
Trigger: GTCATAAACAAACACTGACCACTTAGTTGGGTAAAA...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGGCCCCGTGGCCCGCCTaGGTGTCCACGTGGATAAGC +
Preference number: 5 (lower is better)
Translates to: RGKALEVFCRCQEEARKLAPWPA*VSTWIS
Trigger: GCTTATCCACGTGGACACCAAGGCGGGCCACGGGGC...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 90 bp TGCTTTGCTTCCTGCTGCGGCCCACGATGTACTGAAGGGTGGCAATaGACTTCAGGGAGTGAAGCGGGACCACGCGGTCATCATGGTCAG +
Preference number: 5 (lower is better)
Translates to: CFASCCGPRCTEGWQ*TSGSEAGPRGHHGQ
Trigger: CTGACCATGATGACCGCGTGGTCCCGCTTCACTCCCTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCAGGAAGCAAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 90 bp AATCCAGTCGACGTTCAGGCACCGCGCGATGAACGCAAACATGTCTaGGACTTCCTCTATCACTTTGGCTGTGGGCTTCCCCGCCCCGTG +
Preference number: 5 (lower is better)
Translates to: NPVDVQAPRDERKHV*DFLYHFGCGLPRPV
Trigger: CACGGGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTCATCGCGCGGTGCCTGAACGTCGACTGGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 90 bp ACTTCAGGGAGTGAAGCGGGACCACGCGGTCATCATGGTCAGCAGTaGGGAGCAGCATGGACGGGTACTGGATGTCATCTGCTTCTGGTA +
Preference number: 5 (lower is better)
Translates to: TSGSEAGPRGHHGQQ*GAAWTGTGCHLLLV
Trigger: TACCAGAAGCAGATGACATCCAGTACCCGTCCATGCTGCTCCTCACTGCTGACCATGATGACCGCGTGGTCCCGCTTCACTCCCTGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGTCCTGGCTGGGGAACTaGGACCTTTGCCAAATGGGG +
Preference number: 5 (lower is better)
Translates to: PAFESLQLLLGISYVACWSWLGN*DLCQMG
Trigger: CCCCATTTGGCAAAGGTCCAAGTTCCCCAGCCAGGA...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS CCA 90 bp ACGCATAACCTCGGAGTGCCACTGTGCCATCGTCAGACAGTATGTTaGGGTCCAGGAACACTCTGGCCTCACCCTCTAAGGAATCCTGTA +
Preference number: 5 (lower is better)
Translates to: THNLGVPLCHRQTVC*GPGTLWPHPLRNPV
Trigger: TACAGGATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATGGCACAGTGGCACTCCGAGGTTATGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGACTGGCGATTCGTCTaGAATGTGAACACCGTCCCC +
Preference number: 5 (lower is better)
Translates to: SWCQRGKALEVFCRCQEEDWRFV*NVNTVP
Trigger: GGGGACGGTGTTCACATTCAAGACGAATCGCCAGTC...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AAAACTGTGGCAGAAAGGTTAAATGACTTGCCCCACGTGGATTTCAGGCCTGTCCAGGTGGGAGGGGCCTaGATAAACACCTGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: KTVAERLNDLPHVDFRPVQVGGA*INTWCP
Trigger: AGGGCACCAGGTGTTTATCAAGGCCCCTCCCACCTG...GACAGGCCTGAAATCCACGTGGGGCAAGTCATTTAACCTTTCTGCCACAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CAA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATGCCCCGTGGCCCGCCTaGGTGTCCACGTGGATAAGC +
Preference number: 5 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNAPWPA*VSTWIS
Trigger: GCTTATCCACGTGGACACCAAGGCGGGCCACGGGGC...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAACGTGGGAAAGCCCTaGAGGTTTTCTGTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVNVGKP*RFSVAV
Trigger: GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTT...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS GCA 90 bp ATGCCACGTCTCTCCATATTCGCCACCTCCTCTGATGTTGGCCACTaGCAGGATACCACCCATGTGTCTCACAAAAATAAGCCTGGAAAC +
Preference number: 5 (lower is better)
Translates to: MPRLSIFATSSDVGH*QDTTHVSHKNKPGN
Trigger: GTTTCCAGGCTTATTTTTGTGAGACACATGGGTGGTATCCTGGCAGTGGCCAACATCAGAGGAGGTGGCGAATATGGAGAGACGTGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 90 bp CCACTGTGCCATCGTCAGACAGTATGTTGGGGTCCAGGAACACTCTaGCCTCACCCTCTAAGGAATCCTGTACATATAATACTCGCTGGT +
Preference number: 5 (lower is better)
Translates to: PLCHRQTVCWGPGTL*PHPLRNPVHIILAG
Trigger: ACCAGCGAGTATTATATGTACAGGATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATGGCACAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 90 bp ACGCGGTCATCATGGTCAGCAGTGAGGAGCAGCATGGACGGGTACTaGATGTCATCTGCTTCTGGTAACTTCACATTATGCAATGGAGAG +
Preference number: 5 (lower is better)
Translates to: TRSSWSAVRSSMDGY*MSSASGNFTLCNGE
Trigger: CTCTCCATTGCATAATGTGAAGTTACCAGAAGCAGATGACATCCAGTACCCGTCCATGCTGCTCCTCACTGCTGACCATGATGACCGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TGTCTGACAGAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTCTATCACCTCTCGGAAAACTCTaGGCTCCAGCTCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: CLTELLDPVCLLGPVCLSPLGKL*APAPLW
Trigger: CCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGG...TGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTCTGTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CAA 90 bp AACAATGTTCTGATTCCTAATCTGTGGCCTGTGTGGTCCAGCCCTCCAGGTGGGAGTTTCACAGAAACATaGTGGGGAACATCCAGCGCT +
Preference number: 5 (lower is better)
Translates to: NNVLIPNLWPVWSSPPGGSFTET*WGTSSA
Trigger: AGCGCTGGATGTTCCCCACAATGTTTCTGTGAAACT...CCCACCTGGAGGGCTGGACCACACAGGCCACAGATTAGGAATCAGAACATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS TCA 90 bp CGAAAACTGTTTATGGAATCCAGTCGACGTTCAGGCACCGCGCGATaGACGCAAACATGTCTGAGACTTCCTCTATCACTTTGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RKLFMESSRRSGTAR*TQTCLRLPLSLWLW
Trigger: CCACAGCCAAAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTCATCGCGCGGTGCCTGAACGTCGACTGGATTCCATAAACAGTTTTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 90 bp TTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGTTTATaGAATCCAGTCGACGTTCAGGCACCGCGCGATGAACGCAAACAT +
Preference number: 5 (lower is better)
Translates to: LRFSVAVRRKHENCL*NPVDVQAPRDERKH
Trigger: ATGTTTGCGTTCATCGCGCGGTGCCTGAACGTCGACTGGATTCCATAAACAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCTTGCAGCAACAAGAATaGGTAACCAAAGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVLQQQE*VTKALA
Trigger: GGCCAAGGCTTTGGTTACCAATTCTTGTTGCTGCAA...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR CAA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTACTTCCTCTATCACTTaGGCTGTGGGCTTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: GSNREESLRVLGRSPISSTSSIT*AVGFPA
Trigger: GGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGT...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp CCTGCCTTTGAGTCTTTGCAACTCCTTCTGGGCATTAGCTATGTGGCCTGCTGGCTAAGTGGTCAGTGTTaGTTTATGACAGTGAACCCC +
Preference number: 5 (lower is better)
Translates to: PAFESLQLLLGISYVACWLSGQC*FMTVNP
Trigger: GGGGTTCACTGTCATAAACAAACACTGACCACTTAG...CCAGCAGGCCACATAGCTAATGCCCAGAAGGAGTTGCAAAGACTCAAAGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGTCCAACTCAGCTATTaGTACTTCACACCACACAGC +
Preference number: 5 (lower is better)
Translates to: SWCQRGKALEVFCRCQEEVQLSY*YFTPHS
Trigger: GCTGTGTGGTGTGAAGTACAAATAGCTGAGTTGGAC...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGTCCTTAACCTGCCTTaGAGTCTTTGCAACTCCTTC +
Preference number: 5 (lower is better)
Translates to: SWCQRGKALEVFCRCQEEVLNLP*SLCNSF
Trigger: GAAGGAGTTGCAAAGACTCAAAGGCAGGTTAAGGAC...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS CCA 90 bp CAACAAGAATTGGTAACCAAAGCCTTGGCCTTCTCAATGATGGTCTaGATTACTCTACCAGGCAGGCATCCTAGACCAGCCACAGTATGG +
Preference number: 5 (lower is better)
Translates to: QQELVTKALAFSMMV*ITLPGRHPRPATVW
Trigger: CCATACTGTGGCTGGTCTAGGATGCCTGCCTGGTAGAGTAATCCAGACCATCATTGAGAAGGCCAAGGCTTTGGTTACCAATTCTTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR CAA 90 bp CGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGGTCCATTACTCCAACTaGGGCAATAACACAACCAAA +
Preference number: 5 (lower is better)
Translates to: RGKALEVFCRCQEEARKLVHYSN*GNNTTK
Trigger: TTTGGTTGTGTTATTGCCCAAGTTGGAGTAATGGAC...CAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCACTTCCTCTATCACTTaGGCTGTGGGCTTCCCCGCC +
Preference number: 5 (lower is better)
Translates to: CRKVKCFILTENSTSGVATSSIT*AVGFPA
Trigger: GGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTCTCAGGCTCTGCCCATaGCTGCTGTCCTCACCAACC +
Preference number: 5 (lower is better)
Translates to: TLATGTLCFQRSYGESYTLRLCP*LLSSPT
Trigger: GGTTGGTGAGGACAGCAGCAATGGGCAGAGCCTGAG...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS TCA 90 bp AGCATTATGCCCAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTaGGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGTTTAT +
Preference number: 5 (lower is better)
Translates to: SIMPSGFLVSTWESP*GFLSLSGGSTKTVY
Trigger: ATAAACAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTGGGCATAATGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGTCAACTTTCATGAACTaGATTGTCACCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWSTFMN*IVTQSE
Trigger: CTCAGACTGGGTGACAATCAAGTTCATGAAAGTTGA...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGACATCTGGAAGCTCTTaGGCACCATCAACTTTCATG +
Preference number: 5 (lower is better)
Translates to: DDRVSACNTSYWHTLFPETSGSS*APSTFM
Trigger: CATGAAAGTTGATGGTGCCAAAGAGCTTCCAGATGT...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTCCTCTCGGAAAACTCTaGGCTCCAGCTCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: RKVKCFILTENSTSGVAPPLGKL*APAPLW
Trigger: CCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGG...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AATAGCATTCCTTCTCACGGACTATTCATTTGCCCCACTTTGTTTCTTCACAGCCCTCTCGGAAAACTCTaGGCTCCAGCTCCTCTTTGG +
Preference number: 5 (lower is better)
Translates to: NSIPSHGLFICPTLFLHSPLGKL*APAPLW
Trigger: CCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGG...GCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp GGGAACATCCAGCGCTCTTTATTCTCATCTTCCTTCACAAACAATGTTCTGATTGAAGACTCAGTACCCTaGGGGAGCTGGACTGTCTGG +
Preference number: 5 (lower is better)
Translates to: GNIQRSLFSSSFTNNVLIEDSVP*GSWTVW
Trigger: CCAGACAGTCCAGCTCCCCAAGGGTACTGAGTCTTC...AATCAGAACATTGTTTGTGAAGGAAGATGAGAATAAAGAGCGCTGGATGTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CAA 90 bp GAGCTTCTTGACCCTGTATGTCTTCTCGGCCCTGTATGTCTATCAAGAATGTTGACACCTGGTGCCCTATaGGTGACCTCTCATTGCAAA +
Preference number: 5 (lower is better)
Translates to: ELLDPVCLLGPVCLSRMLTPGAL*VTSHCK
Trigger: TTTGCAATGAGAGGTCACCAATAGGGCACCAGGTGT...CAACATTCTTGATAGACATACAGGGCCGAGAAGACATACAGGGTCAAGAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CAA 90 bp CAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCTGCAGGAGAAACAGCTaGGGAAATGCTGAAATTTCT +
Preference number: 5 (lower is better)
Translates to: QWFLGVNVGKPLRFSVAVCRRNS*GNAEIS
Trigger: AGAAATTTCAGCATTTCCCAAGCTGTTTCTCCTGCA...GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGTGTCAACAACAGAAATaGCTCTCTCACAGTCCTAGA +
Preference number: 5 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWCQQQK*LSHSPR
Trigger: TCTAGGACTGTGAGAGAGCAATTTCTGTTGTTGACA...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAATCACGGACTATTCATTaGCCCCACTTTGTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SWCQRGKALEVFCRCQEESRTIH*PHFVSS
Trigger: TGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGA...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS CCA 90 bp GTTTGCTGTCCGAGCACCCATAATCAGTGGTCCAAGCATGGCCGATaGTATATTTATGAAACTTCAGCATGTCCATTACTCCAACTTGGG +
Preference number: 5 (lower is better)
Translates to: VCCPSTHNQWSKHGR*YIYETSACPLLQLG
Trigger: CCCAAGTTGGAGTAATGGACATGCTGAAGTTTCATAAATATACCATCGGCCATGCTTGGACCACTGATTATGGGTGCTCGGACAGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TCTTGGTGTCAACGTGGGAAAGCCCTTGAGGTTTTCTGTCGCTGTCAGGAGGAATCAGTCATTCTCTCTTaGTATAAACCTCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: SWCQRGKALEVFCRCQEESVILS*YKPLMG
Trigger: TCCCATCAGAGGTTTATACAAAGAGAGAATGACTGA...TTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATTCGTCAGACAGTATGTaGGGGTCCAGGAACACTCTG +
Preference number: 5 (lower is better)
Translates to: IKFPRQFCSTVACECRNNSSDSM*GSRNTL
Trigger: CAGAGTGTTCCTGGACCCCAACATACTGTCTGACGA...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTGACTGGCGATTCGTCTaGAATGTGAACACCGTCCCC +
Preference number: 5 (lower is better)
Translates to: TLATGTLCFQRSYGESYTDWRFV*NVNTVP
Trigger: GGGGACGGTGTTCACATTCAAGACGAATCGCCAGTC...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATGGTCAGGTCTCTGATTaGCACAAGCAGCCACTAAGA +
Preference number: 5 (lower is better)
Translates to: KIKFPRQFCSTVACECRNGQVSD*HKQPLR
Trigger: TCTTAGTGGCTGCTTGTGCAAATCAGAGACCTGACC...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTAAGCCATTCAAAGTGTaGTTTGCTGTCCGAGCACCC +
Preference number: 5 (lower is better)
Translates to: GSNREESLRVLGRSPISSKPFKV*FAVRAP
Trigger: GGGTGCTCGGACAGCAAACAACACTTTGAATGGCTT...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTATGCCCAGTGGTTTCTaGGTGTCAACGTGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: RKVKCFILTENSTSGVAPMPSGF*VSTWES
Trigger: GCTTTCCCACGTTGACACCAAGAAACCACTGGGCAT...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AATAGCATTCCTTCTCACGGACTATTCATTTGCCCCACTTTGTTTCTTCACAGCATGCCCAGTGGTTTCTaGGTGTCAACGTGGGAAAGC +
Preference number: 5 (lower is better)
Translates to: NSIPSHGLFICPTLFLHSMPSGF*VSTWES
Trigger: GCTTTCCCACGTTGACACCAAGAAACCACTGGGCAT...GCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp GACGACAGAGTCTCAGCATGCAACACTAGCTACTGGCACACTTTGTTTCCAGAGACTATACCCAGTCATTaGTGTCTGGCTTCTTTCACT +
Preference number: 5 (lower is better)
Translates to: DDRVSACNTSYWHTLFPETIPSH*CLASFT
Trigger: AGTGAAAGAAGCCAGACACAAATGACTGGGTATAGT...CTCTGGAAACAAAGTGTGCCAGTAGCTAGTGTTGCATGCTGAGACTCTGTCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS CCA 90 bp CAGTTTCCACTACGTCTGCATCTGACTGGTCATTTTGGGATCCTCTaGCCAGTAGATAGGCAGGCAAAGGAAAAAGTATTTGTACTGGAA +
Preference number: 5 (lower is better)
Translates to: QFPLRLHLTGHFGIL*PVDRQAKEKVFVLE
Trigger: TTCCAGTACAAATACTTTTTCCTTTGCCTGCCTATCTACTGGCCAGAGGATCCCAAAATGACCAGTCAGATGCAGACGTAGTGGAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS CCA 90 bp ATGGGTCCAGGCCATACAGCTGAACTTGACTCTTTCAAGCACATCTaGAAGCTCTTTGGCACCATCAACTTTCATGAACTTGATTGTCAC +
Preference number: 5 (lower is better)
Translates to: MGPGHTAELDSFKHI*KLFGTINFHELDCH
Trigger: GTGACAATCAAGTTCATGAAAGTTGATGGTGCCAAAGAGCTTCCAGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCCTGGACCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATGGTCAGGTCTCTGATTaGCACAAGCAGCCACTAAGA +
Preference number: 5 (lower is better)
Translates to: IKFPRQFCSTVACECRNNGQVSD*HKQPLR
Trigger: TCTTAGTGGCTGCTTGTGCAAATCAGAGACCTGACC...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCAAGCCATTCAAAGTGTaGTTTGCTGTCCGAGCACCC +
Preference number: 5 (lower is better)
Translates to: CRKVKCFILTENSTSGVAKPFKV*FAVRAP
Trigger: GGGTGCTCGGACAGCAAACAACACTTTGAATGGCTT...GGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCAACGTGGGAAAGCCCTaGAGGTTTTCTGTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCNVGKP*RFSVAV
Trigger: GACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTT...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TCATCTTCCTTCACAAACAATGTTCTGATTCCTAATCTGTGGCCTGTGTGGTCCAAACAGGAGGCCAGTTaGCCAACTGCTGATGTAGAA +
Preference number: 5 (lower is better)
Translates to: SSSFTNNVLIPNLWPVWSKQEAS*PTADVE
Trigger: TTCTACATCAGCAGTTGGCAAACTGGCCTCCTGTTT...GGACCACACAGGCCACAGATTAGGAATCAGAACATTGTTTGTGAAGGAAGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CAA 90 bp AACTGGATGAGGGCAGGACATTTTCTCTCTGCACCTTCAGCCCCTGAGATATGGACATACATATACAACTaGGAAGATGGGACTTACTTG +
Preference number: 5 (lower is better)
Translates to: NWMRAGHFLSAPSAPEIWTYIYN*EDGTYL
Trigger: CAAGTAAGTCCCATCTTCCAAGTTGTATATGTATGT...CCATATCTCAGGGGCTGAAGGTGCAGAGAGAAAATGTCCTGCCCTCATCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTGAGGCTGCCTCTGGCTaGACCATGCAAATGTATTTT +
Preference number: 5 (lower is better)
Translates to: GSNREESLRVLGRSPISSEAASG*TMQMYF
Trigger: AAAATACATTTGCATGGTCAAGCCAGAGGCAGCCTC...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATCCTCCTCCTCATCAGTaGCTAAGTGACATTTGGGAT +
Preference number: 5 (lower is better)
Translates to: KIKFPRQFCSTVACECRNPPPHQ*LSDIWD
Trigger: ATCCCAAATGTCACTTAGCAACTGATGAGGAGGAGG...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS CCA 90 bp CAAGCCATTCAAAGTGTTGTTTGCTGTCCGAGCACCCATAATCAGTaGTCCAAGCATGGCCGATGGTATATTTATGAAACTTCAGCATGT +
Preference number: 5 (lower is better)
Translates to: QAIQSVVCCPSTHNQ*SKHGRWYIYETSAC
Trigger: ACATGCTGAAGTTTCATAAATATACCATCGGCCATGCTTGGACCACTGATTATGGGTGCTCGGACAGCAAACAACACTTTGAATGGCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATGCCATACAGCTGAACTaGACTCTTTCAAGCACATCT +
Preference number: 5 (lower is better)
Translates to: KIKFPRQFCSTVACECRNAIQLN*TLSSTS
Trigger: AGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGC...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTAGCTTTTGGTGGAGATaGGTAGATGTCTCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: RKVKCFILTENSTSGVAPSFWWR*VDVSVP
Trigger: TGGCACAGAGACATCTACCAATCTCCACCAAAAGCT...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATCATAAGACCAAGAAGTaGGACCTGACACAAGCTATC +
Preference number: 5 (lower is better)
Translates to: KIKFPRQFCSTVACECRNHKTKK*DLTQAI
Trigger: GATAGCTTGTGTCAGGTCCAACTTCTTGGTCTTATG...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp GGATCAAATAGAGAAGAATCCCTTAGAGTTCTGGGTAGGAGCCCAATCTCAAGTCATAAGACCAAGAAGTaGGACCTGACACAAGCTATC +
Preference number: 5 (lower is better)
Translates to: GSNREESLRVLGRSPISSHKTKK*DLTQAI
Trigger: GATAGCTTGTGTCAGGTCCAACTTCTTGGTCTTATG...ACTTGAGATTGGGCTCCTACCCAGAACTCTAAGGGATTCTTCTCTATTTGATCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGACTCCACTTCTGGAGTaGCCCCTCAATATGAAGAAA +
Preference number: 5 (lower is better)
Translates to: KKIKFPRQFCSTVACECRTPLLE*PLNMKK
Trigger: TTTCTTCATATTGAGGGGCAACTCCAGAAGTGGAGT...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTCTGAGATCCTGTCATTaGCAGCAACATGGATGGAAC +
Preference number: 5 (lower is better)
Translates to: RKVKCFILTENSTSGVAPLRSCH*QQHGWN
Trigger: GTTCCATCCATGTTGCTGCAAATGACAGGATCTCAG...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTAAGGCACTGGCAGATTaGGTGTCTAATGAGGGTTGC +
Preference number: 5 (lower is better)
Translates to: TLATGTLCFQRSYGESYTKALAD*VSNEGC
Trigger: GCAACCCTCATTAGACACCAAATCTGCCAGTGCCTT...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS TCA 90 bp TGCGAATACTTCATGGCGCTTCCCATACCTGCTGATAATCATAAATaGGTGATTGCAGCAACAAGAATTGGTAACCAAAGCCTTGGCCTT +
Preference number: 5 (lower is better)
Translates to: CEYFMALPIPADNHK*VIAATRIGNQSLGL
Trigger: AAGGCCAAGGCTTTGGTTACCAATTCTTGTTGCTGCAATCACTCATTTATGATTATCAGCAGGTATGGGAAGCGCCATGAAGTATTCGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS TCA 90 bp CATCCATTTAGGTTCATCAGGAAACTCAGCACACAAAATATCTTCTaGCTGATCGGTTCCCAAGACATGGTAGTAGAGCTTTTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: HPFRFIRKLSTQNIF*LIGSQDMVVELLVE
Trigger: CTCCACCAAAAGCTCTACTACCATGTCTTGGGAACCGATCAGTCAGAAGATATTTTGTGTGCTGAGTTTCCTGATGAACCTAAATGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS GCA 90 bp CAAAATGAGGGCAGGGAGGAAAATATCCGAAATTCAGGAATTCCCTaGGAATACTTCATGGCGCTTCCCATACCTGCTGATAATCATAAA +
Preference number: 5 (lower is better)
Translates to: QNEGREENIRNSGIP*EYFMALPIPADNHK
Trigger: TTTATGATTATCAGCAGGTATGGGAAGCGCCATGAAGTATTCGCAGGGAATTCCTGAATTTCGGATATTTTCCTCCCTGCCCTCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS GCA 90 bp GGGGATAAGAGGTGTTATATACTTTCAGTCATCAGCCATATATGGTaGTGTCACGGATGTGTAGAATACATGAATCTGGGATCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: GDKRCYILSVISHIW*CHGCVEYMNLGSKV
Trigger: GACCTTGGATCCCAGATTCATGTATTCTACACATCCGTGACAGCACCATATATGGCTGATGACTGAAAGTATATAACACCTCTTATCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS CCA 90 bp GGTGGGGATAAGAGGTGTTATATACTTTCAGTCATCAGCCATATATaGTGCTGTCACGGATGTGTAGAATACATGAATCTGGGATCCAAG +
Preference number: 5 (lower is better)
Translates to: GGDKRCYILSVISHI*CCHGCVEYMNLGSK
Trigger: CTTGGATCCCAGATTCATGTATTCTACACATCCGTGACAGCACCATATATGGCTGATGACTGAAAGTATATAACACCTCTTATCCCCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS CCA 90 bp ATCAGAAGCATCAATTCCTTTTACGGTCACCTCTCGGAAAACTCTTaGCTCCAGCTCCTCTTTGGTAAGATCACAGTGATAAATGATACC +
Preference number: 5 (lower is better)
Translates to: IRSINSFYGHLSENS*LQLLFGKITVINDT
Trigger: GGTATCATTTATCACTGTGATCTTACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGGTGACCGTAAAAGGAATTGATGCTTCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATGCCATACAGCTGAACTaGACTCTTTCAAGCACATCT +
Preference number: 5 (lower is better)
Translates to: IKFPRQFCSTVACECRNNAIQLN*TLSSTS
Trigger: AGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGC...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATTCAAAGCAGTTTTGTTaGTTGGCCAAGATACCACCT +
Preference number: 5 (lower is better)
Translates to: KIKFPRQFCSTVACECRNSKQFC*LAKIPP
Trigger: AGGTGGTATCTTGGCCAACAAACAAAACTGCTTTGA...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATGTCCATTACTCCAACTaGGGCAATAACACAACCAAA +
Preference number: 5 (lower is better)
Translates to: KIKFPRQFCSTVACECRNVHYSN*GNNTTK
Trigger: TTTGGTTGTGTTATTGCCCAAGTTGGAGTAATGGAC...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTAGAAACACCAAGGCCTaGCTAAAAAGGAGAAGCCTA +
Preference number: 5 (lower is better)
Translates to: RKVKCFILTENSTSGVAPRNTKA*LKRRSL
Trigger: TAGGCTTCTCCTTTTTAGCAAGGCCTTGGTGTTTCT...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTTACTCATGTGATCTCTaGGAACCAAGGATCCTTGGA +
Preference number: 5 (lower is better)
Translates to: RKVKCFILTENSTSGVAPYSCDL*EPRILG
Trigger: TCCAAGGATCCTTGGTTCCAAGAGATCACATGAGTA...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTAGCTACTGGCACACTTaGTTTCCAGAGGAGTTATGG +
Preference number: 5 (lower is better)
Translates to: TLATGTLCFQRSYGESYTSYWHT*FPEELW
Trigger: CCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCT...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTAGCTGCTATGGTTCCTaGTGTTACTTCTGTGCTTTT +
Preference number: 5 (lower is better)
Translates to: RKVKCFILTENSTSGVAPSCYGS*CYFCAF
Trigger: AAAAGCACAGAAGTAACACAAGGAACCATAGCAGCT...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS-3UTR CAA 90 bp AGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCCCTTCAACTTTCATGAACTaGATTGTCACCCAGTCTGAG +
Preference number: 5 (lower is better)
Translates to: RKVKCFILTENSTSGVAPSTFMN*IVTQSE
Trigger: CTCAGACTGGGTGACAATCAAGTTCATGAAAGTTGA...AGGGGCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTAGCTTTTGGTGGAGATaGGTAGATGTCTCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: CCRKVKCFILTENSTSGVSFWWR*VDVSVP
Trigger: TGGCACAGAGACATCTACCAATCTCCACCAAAAGCT...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCACATCCTTCCCTTATaGATAACAAGACATAGCGGC +
Preference number: 5 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCHILPL*ITRHSG
Trigger: GCCGCTATGTCTTGTTATCAATAAGGGAAGGATGTG...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATCACATCCTTCCCTTATaGATAACAAGACATAGCGGC +
Preference number: 5 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNHILPL*ITRHSG
Trigger: GCCGCTATGTCTTGTTATCAATAAGGGAAGGATGTG...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGTATTCCCCTTCAAAGTaGTCAATCAGTTTTACCCAC +
Preference number: 5 (lower is better)
Translates to: KKIKFPRQFCSTVACECRYSPSK*SISFTH
Trigger: GTGGGTAAAACTGATTGACAACTTTGAAGGGGAATA...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATGTCATCAAAGCAGTTTaGTTTGTTGGCCAAGATACC +
Preference number: 5 (lower is better)
Translates to: IKFPRQFCSTVACECRNNVIKAV*FVGQDT
Trigger: GGTATCTTGGCCAACAAACAAAACTGCTTTGATGAC...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AAAAAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGTGCAATGGAGAGTATTaGACAAGCCATTCAAAGTGT +
Preference number: 5 (lower is better)
Translates to: KKIKFPRQFCSTVACECRCNGEY*TSHSKC
Trigger: ACACTTTGAATGGCTTGTCAAATACTCTCCATTGCA...CCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATAGAAACACCAAGGCCTaGCTAAAAAGGAGAAGCCTA +
Preference number: 5 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNRNTKA*LKRRSL
Trigger: TAGGCTTCTCCTTTTTAGCAAGGCCTTGGTGTTTCT...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCCTAAGTGGTCAGTGTTaGTTTATGACAGTGAACCCC +
Preference number: 5 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCLSGQC*FMTVNP
Trigger: GGGGTTCACTGTCATAAACAAACACTGACCACTTAG...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TGTTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTTGGAACCAAGGATCCTaGGATCCAAGGAACTCTGAT +
Preference number: 5 (lower is better)
Translates to: CCRKVKCFILTENSTSGVWNQGS*DPRNSD
Trigger: ATCAGAGTTCCTTGGATCCAAGGATCCTTGGTTCCA...AACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AAGATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATTTCATTTGCCCCACTTaGTTTCTTCACAGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: KIKFPRQFCSTVACECRNFICPT*FLHSSF
Trigger: AAAAGAGCTGTGAAGAAACAAAGTGGGGCAAATGAA...ATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS GCA 90 bp TATAGTTCAGTCATTCTCTCTTTGTATAAACCTCTGATGGGACACTaGTCAAGAAATGGCACAGTAATCTTATTCTGGGCCTCCACAAAG +
Preference number: 5 (lower is better)
Translates to: YSSVILSLYKPLMGH*SRNGTVILFWASTK
Trigger: CTTTGTGGAGGCCCAGAATAAGATTACTGTGCCATTTCTTGAGCAGTGTCCCATCAGAGGTTTATACAAAGAGAGAATGACTGAACTATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATTCAAAGCAGTTTTGTTaGTTGGCCAAGATACCACCT +
Preference number: 5 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNSKQFC*LAKIPP
Trigger: AGGTGGTATCTTGGCCAACAAACAAAACTGCTTTGA...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ACACTAGCTACTGGCACACTTTGTTTCCAGAGGAGTTATGGTGAATCTTATACTGTCATCAAAGCAGTTTaGTTTGTTGGCCAAGATACC +
Preference number: 5 (lower is better)
Translates to: TLATGTLCFQRSYGESYTVIKAV*FVGQDT
Trigger: GGTATCTTGGCCAACAAACAAAACTGCTTTGATGAC...AGTATAAGATTCACCATAACTCCTCTGGAAACAAAGTGTGCCAGTAGCTAGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTGGAACCAAGGATCCTaGGATCCAAGGAACTCTGAT +
Preference number: 5 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFWNQGS*DPRNSD
Trigger: ATCAGAGTTCCTTGGATCCAAGGATCCTTGGTTCCA...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp AATAATGCCCTAGTTTCACAGAAACATTGTGGGGAACATCCAGCGCTCTTTATTATTGGTGACCTCTCATaGCAAAGGAACAGAGACATT +
Preference number: 5 (lower is better)
Translates to: NNALVSQKHCGEHPALFIIGDLS*QRNRDI
Trigger: AATGTCTCTGTTCCTTTGCAATGAGAGGTCACCAAT...AATAAAGAGCGCTGGATGTTCCCCACAATGTTTCTGTGAAACTAGGGCATTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448705.1
CDS-3UTR CAA 90 bp AACAGCTTGGGAAATGCTGAAATTTCTGACTGTAAGAAATGCTTGGATATATGTGTCTTTGTCCGAATGTaGCTTCCTGAAAGAGGCACC +
Preference number: 5 (lower is better)
Translates to: NSLGNAEISDCKKCLDICVFVRM*LPERGT
Trigger: GGTGCCTCTTTCAGGAAGCAACATTCGGACAAAGAC...ACATATATCCAAGCATTTCTTACAGTCAGAAATTTCAGCATTTCCCAAGCTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCTCAGTCATTCTCTCTTaGTATAAACCTCTGATGGGA +
Preference number: 5 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCSVILS*YKPLMG
Trigger: TCCCATCAGAGGTTTATACAAAGAGAGAATGACTGA...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTACATCTGGAAGCTCTTaGGCACCATCAACTTTCATG +
Preference number: 5 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFTSGSS*APSTFM
Trigger: CATGAAAGTTGATGGTGCCAAAGAGCTTCCAGATGT...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TTGCAGAAAGGTGAAATGCTTTATTCTCACAGAAAACTCCACTTCTGGAGTTGCTGCAATGGAGAGTATTaGACAAGCCATTCAAAGTGT +
Preference number: 5 (lower is better)
Translates to: LQKGEMLYSHRKLHFWSCCNGEY*TSHSKC
Trigger: ACACTTTGAATGGCTTGTCAAATACTCTCCATTGCA...GCAACTCCAGAAGTGGAGTTTTCTGTGAGAATAAAGCATTTCACCTTTCTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp TCACCTCTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTACTCCACTTCTGGAGTaGCCCCTCAATATGAAGAAA +
Preference number: 5 (lower is better)
Translates to: SPLTNKQTRETEWMNNLFTPLLE*PLNMKK
Trigger: TTTCTTCATATTGAGGGGCAACTCCAGAAGTGGAGT...AAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAGAGGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS-3UTR CAA 90 bp ATAAAATTCCCACGGCAGTTCTGTTCAACTGTAGCCTGTGAGTGCAGGAATAATTATATCTTAAAAATCTaGGGGGTGGGCAAACCAAAA +
Preference number: 5 (lower is better)
Translates to: IKFPRQFCSTVACECRNNYILKI*GVGKPK
Trigger: TTTTGGTTTGCCCACCCCCAAGATTTTTAAGATATA...ATTATTCCTGCACTCACAGGCTACAGTTGAACAGAACTGCCGTGGGAATTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AATAGCATTCCTTCTCACGGACTATTCATTTGCCCCACTTTGTTTCTTCACAGCTGTCTTTCAATATGCTaGGTATGCAGTGATATGCTT +
Preference number: 5 (lower is better)
Translates to: NSIPSHGLFICPTLFLHSCLSIC*VCSDML
Trigger: AAGCATATCACTGCATACCAAGCATATTGAAAGACA...GCTGTGAAGAAACAAAGTGGGGCAAATGAATAGTCCGTGAGAAGGAATGCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp AACAGCTTGGGAAATGCTGAAATTTCTGACTGTAAGAAATGCTTGGATATATGTTACTCATGTGATCTCTaGGAACCAAGGATCCTTGGA +
Preference number: 5 (lower is better)
Translates to: NSLGNAEISDCKKCLDICYSCDL*EPRILG
Trigger: TCCAAGGATCCTTGGTTCCAAGAGATCACATGAGTA...ACATATATCCAAGCATTTCTTACAGTCAGAAATTTCAGCATTTCCCAAGCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp GGAGTTGCCCCTCAATATGAAGAAACCGGAAGTAAAAGCCTGTCATTCTTAAATAGTTTTAGAACATTTTaGTCATCCCGGTTAGATCCT +
Preference number: 5 (lower is better)
Translates to: GVAPQYEETGSKSLSFLNSFRTF*SSRLDP
Trigger: AGGATCTAACCGGGATGACAAAAATGTTCTAAAACT...ATTTAAGAATGACAGGCTTTTACTTCCGGTTTCTTCATATTGAGGGGCAACTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGATGTGCTTCCTAAGGTaGTGTGAGGACAAACATTCA +
Preference number: 5 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKMCFLR*CEDKHS
Trigger: TGAATGTTTGTCCTCACACAACCTTAGGAAGCACAT...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000652536.2
CDS-3UTR CAA 90 bp CTAACAAACAAACAAACAAGGGAGACAGAGTGGATGAACAACTTATTTTCAAAGTATTCCCCTTCAAAGTaGTCAATCAGTTTTACCCAC +
Preference number: 5 (lower is better)
Translates to: LTNKQTRETEWMNNLFSKYSPSK*SISFTH
Trigger: GTGGGTAAAACTGATTGACAACTTTGAAGGGGAATA...CTTTGAAAATAAGTTGTTCATCCACTCTGTCTCCCTTGTTTGTTTGTTTGTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 72 bp TCCTCTATCACTTTGGCTGTGGGCTTCCCCGCCCCGTaGCCCGCCTTGGTGTCCACGTGGATAAGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: SSITLAVGFPAP*PALVSTWISRG
Trigger: CCCCCTGCTTATCCACGTGGACACCAAGGCGGGCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 90 bp CACCGCGCGATGAACGCAAACATGTCTGAGACTTCCTCTATCACTTaGGCTGTGGGCTTCCCCGCCCCGTGGCCCGCCTTGGTGTCCACG +
Preference number: 6 (lower is better)
Translates to: HRAMNANMSETSSIT*AVGFPAPWPALVST
Trigger: CGTGGACACCAAGGCGGGCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTCATCGCGCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 72 bp TCCTGCTGCGGCCCACGATGTACTGAAGGGTGGCAATaGACTTCAGGGAGTGAAGCGGGACCACGCGGTCAT +
Preference number: 6 (lower is better)
Translates to: SCCGPRCTEGWQ*TSGSEAGPRGH
Trigger: ATGACCGCGTGGTCCCGCTTCACTCCCTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 72 bp AGTGAAGCGGGACCACGCGGTCATCATGGTCAGCAGTaGGGAGCAGCATGGACGGGTACTGGATGTCATCTG +
Preference number: 6 (lower is better)
Translates to: SEAGPRGHHGQQ*GAAWTGTGCHL
Trigger: CAGATGACATCCAGTACCCGTCCATGCTGCTCCTCACTGCTGACCATGATGACCGCGTGGTCCCGCTTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 72 bp CTCGGAGTGCCACTGTGCCATCGTCAGACAGTATGTTaGGGTCCAGGAACACTCTGGCCTCACCCTCTAAGG +
Preference number: 6 (lower is better)
Translates to: LGVPLCHRQTVC*GPGTLWPHPLR
Trigger: CCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATGGCACAGTGGCACTCCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 72 bp CCTCGGAGTGCCACTGTGCCATCGTCAGACAGTATGTaGGGGTCCAGGAACACTCTGGCCTCACCCTCTAAG +
Preference number: 6 (lower is better)
Translates to: PRSATVPSSDSM*GSRNTLASPSK
Trigger: CTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATGGCACAGTGGCACTCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 72 bp ATGAACGCAAACATGTCTGAGACTTCCTCTATCACTTaGGCTGTGGGCTTCCCCGCCCCGTGGCCCGCCTTG +
Preference number: 6 (lower is better)
Translates to: MNANMSETSSIT*AVGFPAPWPAL
Trigger: CAAGGCGGGCCACGGGGCGGGGAAGCCCACAGCCAAAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 72 bp GACGTTCAGGCACCGCGCGATGAACGCAAACATGTCTaGGACTTCCTCTATCACTTTGGCTGTGGGCTTCCC +
Preference number: 6 (lower is better)
Translates to: DVQAPRDERKHV*DFLYHFGCGLP
Trigger: GGGAAGCCCACAGCCAAAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTCATCGCGCGGTGCCTGAACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 72 bp TGCCACGTCTCTCCATATTCGCCACCTCCTCTGATGTaGGCCACTGCCAGGATACCACCCATGTGTCTCACA +
Preference number: 6 (lower is better)
Translates to: CHVSPYSPPPLM*ATARIPPMCLT
Trigger: TGTGAGACACATGGGTGGTATCCTGGCAGTGGCCAACATCAGAGGAGGTGGCGAATATGGAGAGACGTGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 72 bp TCTGTCGCTGTCAGGAGGAAGCACGAAAACTGTTTATaGAATCCAGTCGACGTTCAGGCACCGCGCGATGAA +
Preference number: 6 (lower is better)
Translates to: SVAVRRKHENCL*NPVDVQAPRDE
Trigger: TTCATCGCGCGGTGCCTGAACGTCGACTGGATTCCATAAACAGTTTTCGTGCTTCCTCCTGACAGCGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 90 bp CCACCTTTATGCCACGTCTCTCCATATTCGCCACCTCCTCTGATGTaGGCCACTGCCAGGATACCACCCATGTGTCTCACAAAAATAAGC +
Preference number: 6 (lower is better)
Translates to: PPLCHVSPYSPPPLM*ATARIPPMCLTKIS
Trigger: GCTTATTTTTGTGAGACACATGGGTGGTATCCTGGCAGTGGCCAACATCAGAGGAGGTGGCGAATATGGAGAGACGTGGCATAAAGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 72 bp TTGGTAACCAAAGCCTTGGCCTTCTCAATGATGGTCTaGATTACTCTACCAGGCAGGCATCCTAGACCAGCC +
Preference number: 6 (lower is better)
Translates to: LVTKALAFSMMV*ITLPGRHPRPA
Trigger: GGCTGGTCTAGGATGCCTGCCTGGTAGAGTAATCCAGACCATCATTGAGAAGGCCAAGGCTTTGGTTACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS CAA 72 bp CCCTTCCCATCATGGGTCCAGGCCATACAGCTGAACTaGACTCTTTCAAGCACATCTGGAAGCTCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: PFPSWVQAIQLN*TLSSTSGSSLA
Trigger: TGCCAAAGAGCTTCCAGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCCTGGACCCATGATGGGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS GCA 72 bp CTCTCCATATTCGCCACCTCCTCTGATGTTGGCCACTaGCAGGATACCACCCATGTGTCTCACAAAAATAAG +
Preference number: 6 (lower is better)
Translates to: LSIFATSSDVGH*QDTTHVSHKNK
Trigger: CTTATTTTTGTGAGACACATGGGTGGTATCCTGGCAGTGGCCAACATCAGAGGAGGTGGCGAATATGGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 72 bp TTTATGGAATCCAGTCGACGTTCAGGCACCGCGCGATaGACGCAAACATGTCTGAGACTTCCTCTATCACTT +
Preference number: 6 (lower is better)
Translates to: FMESSRRSGTAR*TQTCLRLPLSL
Trigger: AAGTGATAGAGGAAGTCTCAGACATGTTTGCGTTCATCGCGCGGTGCCTGAACGTCGACTGGATTCCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS GCA 72 bp GGCAGGGAGGAAAATATCCGAAATTCAGGAATTCCCTaGGAATACTTCATGGCGCTTCCCATACCTGCTGAT +
Preference number: 6 (lower is better)
Translates to: GREENIRNSGIP*EYFMALPIPAD
Trigger: ATCAGCAGGTATGGGAAGCGCCATGAAGTATTCGCAGGGAATTCCTGAATTTCGGATATTTTCCTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS CCA 72 bp GGACACTGCTCAAGAAATGGCACAGTAATCTTATTCTaGGCCTCCACAAAGGCCTTAGTCTGTTCACTGTCG +
Preference number: 6 (lower is better)
Translates to: GHCSRNGTVILF*ASTKALVCSLS
Trigger: CGACAGTGAACAGACTAAGGCCTTTGTGGAGGCCCAGAATAAGATTACTGTGCCATTTCTTGAGCAGTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 72 bp TCTGGAAGCTCTTTGGCACCATCAACTTTCATGAACTaGATTGTCACCCAGTCTGAGCCACTGGCACTCAGA +
Preference number: 6 (lower is better)
Translates to: SGSSLAPSTFMN*IVTQSEPLALR
Trigger: TCTGAGTGCCAGTGGCTCAGACTGGGTGACAATCAAGTTCATGAAAGTTGATGGTGCCAAAGAGCTTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 90 bp AAGCATTATGCCCAGTGGTTTCTTGGTGTCAACGTGGGAAAGCCCTaGAGGTTTTCTGTCGCTGTCAGGAGGAAGCACGAAAACTGTTTA +
Preference number: 6 (lower is better)
Translates to: KHYAQWFLGVNVGKP*RFSVAVRRKHENCL
Trigger: TAAACAGTTTTCGTGCTTCCTCCTGACAGCGACAGAAAACCTCAAGGGCTTTCCCACGTTGACACCAAGAAACCACTGGGCATAATGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 90 bp GGTCACAGTACCAGAGTCGGTTTACTGGATCACATCCTTCCCTTATaGATAACAAGACATAGCGGCCATCATCAGATAACTCAGCTCCAC +
Preference number: 6 (lower is better)
Translates to: GHSTRVGLLDHILPL*ITRHSGHHQITQLH
Trigger: GTGGAGCTGAGTTATCTGATGATGGCCGCTATGTCTTGTTATCAATAAGGGAAGGATGTGATCCAGTAAACCGACTCTGGTACTGTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 72 bp ACTTGGGCAATAACACAACCAAAGAGGTCAGGTCTCTaGTTTGCACAAGCAGCCACTAAGAGGCCTCCATTT +
Preference number: 6 (lower is better)
Translates to: TWAITQPKRSGL*FAQAATKRPPF
Trigger: AAATGGAGGCCTCTTAGTGGCTGCTTGTGCAAATCAGAGACCTGACCTCTTTGGTTGTGTTATTGCCCAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 72 bp CATCGTCAGACAGTATGTTGGGGTCCAGGAACACTCTaGCCTCACCCTCTAAGGAATCCTGTACATATAATA +
Preference number: 6 (lower is better)
Translates to: HRQTVCWGPGTL*PHPLRNPVHII
Trigger: TATTATATGTACAGGATTCCTTAGAGGGTGAGGCCAGAGTGTTCCTGGACCCCAACATACTGTCTGACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 72 bp CTACGTCTGCATCTGACTGGTCATTTTGGGATCCTCTaGCCAGTAGATAGGCAGGCAAAGGAAAAAGTATTT +
Preference number: 6 (lower is better)
Translates to: LRLHLTGHFGIL*PVDRQAKEKVF
Trigger: AAATACTTTTTCCTTTGCCTGCCTATCTACTGGCCAGAGGATCCCAAAATGACCAGTCAGATGCAGACGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS CCA 72 bp GGCCATACAGCTGAACTTGACTCTTTCAAGCACATCTaGAAGCTCTTTGGCACCATCAACTTTCATGAACTT +
Preference number: 6 (lower is better)
Translates to: GHTAELDSFKHI*KLFGTINFHEL
Trigger: AAGTTCATGAAAGTTGATGGTGCCAAAGAGCTTCCAGATGTGCTTGAAAGAGTCAAGTTCAGCTGTATGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 72 bp ATCAATTCCTTTTACGGTCACCTCTCGGAAAACTCTTaGCTCCAGCTCCTCTTTGGTAAGATCACAGTGATA +
Preference number: 6 (lower is better)
Translates to: INSFYGHLSENS*LQLLFGKITVI
Trigger: TATCACTGTGATCTTACCAAAGAGGAGCTGGAGCCAAGAGTTTTCCGAGAGGTGACCGTAAAAGGAATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369110.8
ENST00000448705.1
ENST00000652536.2
CDS CCA 72 bp CAAAGTGTTGTTTGCTGTCCGAGCACCCATAATCAGTaGTCCAAGCATGGCCGATGGTATATTTATGAAACT +
Preference number: 6 (lower is better)
Translates to: QSVVCCPSTHNQ*SKHGRWYIYET
Trigger: AGTTTCATAAATATACCATCGGCCATGCTTGGACCACTGATTATGGGTGCTCGGACAGCAAACAACACTTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 72 bp ATGCAATGGAGAGTATTTGACAAGCCATTCAAAGTGTaGTTTGCTGTCCGAGCACCCATAATCAGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: MQWRVFDKPFKV*FAVRAPIISGP
Trigger: TGGACCACTGATTATGGGTGCTCGGACAGCAAACAACACTTTGAATGGCTTGTCAAATACTCTCCATTGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 72 bp TGGCGCTTCCCATACCTGCTGATAATCATAAATGAGTaGTTGCAGCAACAAGAATTGGTAACCAAAGCCTTG +
Preference number: 6 (lower is better)
Translates to: WRFPYLLIIINE*LQQQELVTKAL
Trigger: CAAGGCTTTGGTTACCAATTCTTGTTGCTGCAATCACTCATTTATGATTATCAGCAGGTATGGGAAGCGCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS TCA 72 bp CGTCATGGAGGTAGCATAAGACCAAGAAGTTGGACCTaGCACAAGCTATCCATTCTAAGACATCTTTCTCAT +
Preference number: 6 (lower is better)
Translates to: RHGGSIRPRSWT*HKLSILRHLSH
Trigger: ATGAGAAAGATGTCTTAGAATGGATAGCTTGTGTCAGGTCCAACTTCTTGGTCTTATGCTACCTCCATGACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS GCA 72 bp GTCATTCTCTCTTTGTATAAACCTCTGATGGGACACTaGTCAAGAAATGGCACAGTAATCTTATTCTGGGCC +
Preference number: 6 (lower is better)
Translates to: VILSLYKPLMGH*SRNGTVILFWA
Trigger: GGCCCAGAATAAGATTACTGTGCCATTTCTTGAGCAGTGTCCCATCAGAGGTTTATACAAAGAGAGAATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 72 bp ACCAGAGTCGGTTTACTGGATCACATCCTTCCCTTATaGATAACAAGACATAGCGGCCATCATCAGATAACT +
Preference number: 6 (lower is better)
Translates to: TRVGLLDHILPL*ITRHSGHHQIT
Trigger: AGTTATCTGATGATGGCCGCTATGTCTTGTTATCAATAAGGGAAGGATGTGATCCAGTAAACCGACTCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 72 bp ATACTCAGCAGCACACTGAAAGTCATCAAAGCAGTTTaGTTTGTTGGCCAAGATACCACCTTTATGCCACGT +
Preference number: 6 (lower is better)
Translates to: ILSSTLKVIKAV*FVGQDTTFMPR
Trigger: ACGTGGCATAAAGGTGGTATCTTGGCCAACAAACAAAACTGCTTTGATGACTTTCAGTGTGCTGCTGAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CAA 90 bp GCCGATGGTATATTTATGAAACTTCAGCATGTCCATTACTCCAACTaGGGCAATAACACAACCAAAGAGGTCAGGTCTCTGATTTGCACA +
Preference number: 6 (lower is better)
Translates to: ADGIFMKLQHVHYSN*GNNTTKEVRSLICT
Trigger: TGTGCAAATCAGAGACCTGACCTCTTTGGTTGTGTTATTGCCCAAGTTGGAGTAATGGACATGCTGAAGTTTCATAAATATACCATCGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS TCA 72 bp TTCATGGCGCTTCCCATACCTGCTGATAATCATAAATaGGTGATTGCAGCAACAAGAATTGGTAACCAAAGC +
Preference number: 6 (lower is better)
Translates to: FMALPIPADNHK*VIAATRIGNQS
Trigger: GCTTTGGTTACCAATTCTTGTTGCTGCAATCACTCATTTATGATTATCAGCAGGTATGGGAAGCGCCATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS GCA 72 bp AGGTGTTATATACTTTCAGTCATCAGCCATATATGGTaGTGTCACGGATGTGTAGAATACATGAATCTGGGA +
Preference number: 6 (lower is better)
Translates to: RCYILSVISHIW*CHGCVEYMNLG
Trigger: TCCCAGATTCATGTATTCTACACATCCGTGACAGCACCATATATGGCTGATGACTGAAAGTATATAACACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369110.8
CDS CAA 72 bp ATATTTATGAAACTTCAGCATGTCCATTACTCCAACTaGGGCAATAACACAACCAAAGAGGTCAGGTCTCTG +
Preference number: 6 (lower is better)
Translates to: IFMKLQHVHYSN*GNNTTKEVRSL
Trigger: CAGAGACCTGACCTCTTTGGTTGTGTTATTGCCCAAGTTGGAGTAATGGACATGCTGAAGTTTCATAAATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS GCA 72 bp TACTGGATGTCATCTGCTTCTGGTAACTTCACATTATaGAATGGAGAGTATTTGACAAGCCATTCAAAGTGT +
Preference number: 6 (lower is better)
Translates to: YWMSSASGNFTL*NGEYLTSHSKC
Trigger: ACACTTTGAATGGCTTGTCAAATACTCTCCATTGCATAATGTGAAGTTACCAGAAGCAGATGACATCCAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369110.8
ENST00000652536.2
CDS CCA 72 bp AAGAGGTGTTATATACTTTCAGTCATCAGCCATATATaGTGCTGTCACGGATGTGTAGAATACATGAATCTG +
Preference number: 6 (lower is better)
Translates to: KRCYILSVISHI*CCHGCVEYMNL
Trigger: CAGATTCATGTATTCTACACATCCGTGACAGCACCATATATGGCTGATGACTGAAAGTATATAACACCTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369110.8