RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PREB (Homo sapiens)

Ensembl gene IDs: ENSG00000138073

Ensembl transcript IDs: ENST00000260643.7, ENST00000406567.7, ENST00000416802.1, ENST00000430533.1, ENST00000441451.1, ENST00000444452.5, ENST00000456259.5, ENST00000468045.5, ENST00000474802.1

Found 433 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCAGGGAGGGGGCTGGCGCAGGCGCTTGTGGGGAATTTGCACTGTaGAGAGTCGCAGGCCAGCAGGCTGGTCTGGAACCTGCCCAAACC +
Preference number: 1 (lower is better)
Translates to: SREGAGAGACGEFAL*RVAGQQAGLEPAQT
Trigger: GGTTTGGGCAGGTTCCAGACCAGCCTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCCCCCTCCCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 90 bp GTCTGCACCGCCTGCAAATTCTCTACCCTGAGTTCTAGCCCCTCGTaGTGGGTTTCCGCTCCACATTTCTTCTCTGCTGGGGCTGCTCCC +
Preference number: 1 (lower is better)
Translates to: VCTACKFSTLSSSPS*WVSAPHFFSAGAAP
Trigger: GGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACCCAGCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGCAGGCGGTGCAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 90 bp AGGAGCCACACAGGAACACTCCGCCGTGAGGGCAACAGATGCAGCTaGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGG +
Preference number: 1 (lower is better)
Translates to: RSHTGTLRREGNRCS*QRLSTATENRAVSW
Trigger: CCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGTGTGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
3UTR CCA 90 bp TGCACCGCCTGCAAATTCTCTACCCTGAGTTCTAGCCCCTCGTGCTaGGTTTCCGCTCCACATTTCTTCTCTGCTGGGGCTGCTCCCTTC +
Preference number: 1 (lower is better)
Translates to: CTACKFSTLSSSPSC*VSAPHFFSAGAAPF
Trigger: GAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACCCAGCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGCAGGCGGTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 90 bp AGGAAGGTGCCGGATTCACTGACATCGAGGCAGGAGACGACTTCATaGCCACAGGACTTGGTCCGAAGGGGCAAGAAGTTGGAGCCATCC +
Preference number: 1 (lower is better)
Translates to: RKVPDSLTSRQETTS*PQDLVRRGKKLEPS
Trigger: GGATGGCTCCAACTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATGAAGTCGTCTCCTGCCTCGATGTCAGTGAATCCGGCACCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR TCA 90 bp CATCAGGCCCTAAAGCCAGGTCTTCAATCTCCCCTTCGTGGGCTTTaGACTCCAGAACCTTCTCCAGGCTGGGCACCTTCCAGACACGGA +
Preference number: 1 (lower is better)
Translates to: HQALKPGLQSPLRGL*TPEPSPGWAPSRHG
Trigger: TCCGTGTCTGGAAGGTGCCCAGCCTGGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGAAGACCTGGCTTTAGGGCCTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR TCA 90 bp GAAAAGGTGGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCAGCTaGTCCTTCTGCCACACAGAGGCCTTAAGGTCCCGGCCCACGGTT +
Preference number: 1 (lower is better)
Translates to: EKVGPFSCQCSCVTS*SFCHTEALRSRPTV
Trigger: AACCGTGGGCCGGGACCTTAAGGCCTCTGTGTGGCAGAAGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 90 bp GACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCACCACAATaGCATGGGCCTCCCTCACGTAGTAGAGGCACTGGAGAGAGAAAG +
Preference number: 1 (lower is better)
Translates to: DHDPSQVERPHPSPQ*HGPPSRSRGTGERK
Trigger: CTTTCTCTCTCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
3UTR CCA 90 bp GTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGAT +
Preference number: 1 (lower is better)
Translates to: VPIHLVSGNLSCGPE*SEQRESRPPLCSRD
Trigger: ATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
3UTR CCA 90 bp GCCCAAACCTGCAGGCCTGGTAGCGGTAAGGTGTGCTGGAAAAGGTaGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCAGCTGATCCT +
Preference number: 1 (lower is better)
Translates to: AQTCRPGSGKVCWKR*VHFLASAAVSPADP
Trigger: AGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 90 bp CTGGAACCTGCCCAAACCTGCAGGCCTGGTAGCGGTAAGGTGTGCTaGAAAAGGTGGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCA +
Preference number: 1 (lower is better)
Translates to: LEPAQTCRPGSGKVC*KRWVHFLASAAVSP
Trigger: TGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTTTGGGCAGGTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 90 bp AGCTGGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATaGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAG +
Preference number: 1 (lower is better)
Translates to: SWQRLSTATENRAVS*DPRSSGPRPFSGRK
Trigger: CTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
3UTR TCA 90 bp TATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATA +
Preference number: 1 (lower is better)
Translates to: YGLGFRYRCSGWIHR*RRQGSWDLESHRAI
Trigger: TATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
3UTR CCA 90 bp CTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTaGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAA +
Preference number: 1 (lower is better)
Translates to: LEPLVGRRKEAGSMA*ASDTAVLDGSTDDE
Trigger: TTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR CCA 90 bp AACTTGCCATCAGGCCCTAAAGCCAGGTCTTCAATCTCCCCTTCGTaGGCTTTGAACTCCAGAACCTTCTCCAGGCTGGGCACCTTCCAG +
Preference number: 1 (lower is better)
Translates to: NLPSGPKARSSISPS*ALNSRTFSRLGTFQ
Trigger: CTGGAAGGTGCCCAGCCTGGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGAAGACCTGGCTTTAGGGCCTGATGGCAAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 90 bp ACAACTTTCTGCAGTGGATCGGAGCTAAAGTCTGTCTGCACCGCCTaGAAATTCTCTACCCTGAGTTCTAGCCCCTCGTGCTGGGTTTCC +
Preference number: 1 (lower is better)
Translates to: TTFCSGSELKSVCTA*KFSTLSSSPSCWVS
Trigger: GGAAACCCAGCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 90 bp TTGAAGCACACAACTTTCTGCAGTGGATCGGAGCTAAAGTCTGTCTaGACCGCCTGCAAATTCTCTACCCTGAGTTCTAGCCCCTCGTGC +
Preference number: 1 (lower is better)
Translates to: LKHTTFCSGSELKSV*TACKFSTLSSSPSC
Trigger: GCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 90 bp CCAGTGGCAAGCAGGGTATTATCGTGGTTGAAGCACACAACTTTCTaGAGTGGATCGGAGCTAAAGTCTGTCTGCACCGCCTGCAAATTC +
Preference number: 1 (lower is better)
Translates to: PVASRVLSWLKHTTF*SGSELKSVCTACKF
Trigger: GAATTTGCAGGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACCCTGCTTGCCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 90 bp GGCAAGCAGGGTATTATCGTGGTTGAAGCACACAACTTTCTGCAGTaGATCGGAGCTAAAGTCTGTCTGCACCGCCTGCAAATTCTCTAC +
Preference number: 1 (lower is better)
Translates to: GKQGIIVVEAHNFLQ*IGAKVCLHRLQILY
Trigger: GTAGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACCCTGCTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CAA 90 bp TGTGAGGTAGCAGGGAGGGGGCTGGCGCAGGCGCTTGTGGGGAATTaGCACTGTGAAGAGTCGCAGGCCAGCAGGCTGGTCTGGAACCTG +
Preference number: 2 (lower is better)
Translates to: CEVAGRGLAQALVGN*HCEESQASRLVWNL
Trigger: CAGGTTCCAGACCAGCCTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCCCCCTCCCTGCTACCTCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR TCA 90 bp AACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTGGACCCGAATGGAGTaGGCAAAGGGAGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: NSGASGRQKKGGREYGLGWTRME*AKGVQA
Trigger: GGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA...GCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR CAA 90 bp CCATCAGGCCCTAAAGCCAGGTCTTCAATCTCCCCTTCGTGGGCTTaGAACTCCAGAACCTTCTCCAGGCTGGGCACCTTCCAGACACGG +
Preference number: 2 (lower is better)
Translates to: PSGPKARSSISPSWA*NSRTFSRLGTFQTR
Trigger: CCGTGTCTGGAAGGTGCCCAGCCTGGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGAAGACCTGGCTTTAGGGCCTGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CAA 90 bp GATTCACTGACATCGAGGCAGGAGACGACTTCATGGCCACAGGACTaGGTCCGAAGGGGCAAGAAGTTGGAGCCATCCCAGGCTGTGAGG +
Preference number: 2 (lower is better)
Translates to: DSLTSRQETTSWPQD*VRRGKKLEPSQAVR
Trigger: CCTCACAGCCTGGGATGGCTCCAACTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATGAAGTCGTCTCCTGCCTCGATGTCAGTGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR TCA 90 bp CCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTGGACCCGAATGGAGTaGGCAAAGGGAGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PGLQIPLFWMDPQMTKARWTRME*AKGVQA
Trigger: GGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA...CCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR TCA 90 bp CCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAATGGAAGCGCAGGAGCTaGCAGTGGGCATCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: PFILSAATSAVDPNGVSKWKRRS*QWASCP
Trigger: AGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCA...TTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR GCA 90 bp GGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATCCAGGCCTCCACTCTaGTCTAGAGATGGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: GASGRQKKGGREYGLGFRSRPPL*SRDGSV
Trigger: GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGA...TCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
3UTR-3UTR GCA 90 bp GGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAGGAACCGGCCTTCTCTaGCTTGTTGCCCTGCTGTTG +
Preference number: 2 (lower is better)
Translates to: GQFHGTQGALDHDPSQVEGTGLL*LVALLL
Trigger: CAACAGCAGGGCAACAAGGCAGAGAAGGCCGGTTCC...TTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR GCA 90 bp AGATGCAGCTGGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGCTTTGTCGAGGCCCCTaGTCCTTGGAACCGGCCTTC +
Preference number: 2 (lower is better)
Translates to: RCSWQRLSTATENRAVSWLCRGP*SLEPAF
Trigger: GAAGGCCGGTTCCAAGGAGCAGGGGCCTCGACAAAG...CCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR GCA 90 bp CGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGCTCTCATCCGTCACCACAATaGCATGGGCCTCCCTCACGT +
Preference number: 2 (lower is better)
Translates to: RLSTATENRAVSWDPRSSHPSPQ*HGPPSR
Trigger: ACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATG...AGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
3UTR-3UTR CCA 90 bp AACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: NSGASGRQKKGGREYGLGSCGPE*SEQRES
Trigger: GGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCT...GCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR TCA 90 bp GCACCTTCCAGACACGGACGTAGCCATCTGTTCCTCCAGTGGCAAGCAGGGTATGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: APSRHGRSHLFLQWQAGYGWIHR*RRQGSW
Trigger: CCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCC...ATACCCTGCTTGCCACTGGAGGAACAGATGGCTACGTCCGTGTCTGGAAGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR GCA 90 bp CAGATGACGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATAGCCAATCCAGGCCTCCACTCTaGTCTAGAGATGGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: QMTKARFLGPGVTQGHSQSRPPL*SRDGSV
Trigger: GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGA...TTGGCTATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
3UTR-3UTR TCA 90 bp TCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCTCCTGCCTAATGGGCTaGGGTTCATTTTCCCATTCC +
Preference number: 2 (lower is better)
Translates to: SGASGRQKKGGREYGLGFSCLMG*GSFSHS
Trigger: GGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGA...GAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR TCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGATTGTTGCCCTGCTGTTaGTGTGCCTGGAAGCGCAGG +
Preference number: 2 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRLLPCC*CAWKRR
Trigger: CCTGCGCTTCCAGGCACATCAACAGCAGGGCAACAA...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR GCA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGCCTTTTGCCCCTTCCTaGCCTAACAGCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQPFAPS*PNSKYQ
Trigger: CTGGTACTTGCTGTTAGGGCAGGAAGGGGCAAAAGG...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR GCA 90 bp CAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGAGTTCTAGCCCCTCGTaGTGGGTTTCCGCTCCACAT +
Preference number: 2 (lower is better)
Translates to: QGVWPGLQIPLFWMDPQMSSSPS*WVSAPH
Trigger: ATGTGGAGCGGAAACCCAGCACGAGGGGCTAGAACT...CATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CCA 90 bp GAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCAAGGAGGCAGGGAGTATaGCCTGGGCTTCAGATACCG +
Preference number: 2 (lower is better)
Translates to: ETVSAGRTAVPPGSWASSRRQGV*PGLQIP
Trigger: CGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT...TGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp GTCACACAGGGCCATAGCCAAGCCTTTTCACTAGAAGGGCAGGCAGTGCCCATTTGGCGCAGGCGCTTGTaGGGAATTTGCACTGTGAAG +
Preference number: 2 (lower is better)
Translates to: VTQGHSQAFSLEGQAVPIWRRRL*GICTVK
Trigger: CTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCA...AATGGGCACTGCCTGCCCTTCTAGTGAAAAGGCTTGGCTATGGCCCTGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CAA 90 bp AGTGCTACCCATCTGAACCCCCAGATTACTACCCAAGTCTTCCTTTaGCCCCTTCCTGCCCTAACAGCAAGTACCAGGCCAGTCCCTTCC +
Preference number: 2 (lower is better)
Translates to: SATHLNPQITTQVFL*PLPALTASTRPVPS
Trigger: GGAAGGGACTGGCCTGGTACTTGCTGTTAGGGCAGGAAGGGGCAAAAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATGGGTAGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR GCA 90 bp GAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCATCCAGGCCTCCACTCTaGTCTAGAGATGGCAGTGTC +
Preference number: 2 (lower is better)
Translates to: ETVSAGRTAVPPGSWASSSRPPL*SRDGSV
Trigger: GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGA...TGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
3UTR-3UTR GCA 90 bp GAGGAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCCTTCTCTGCCTTGTTaGCCTGCTGTTGATGTGCCT +
Preference number: 2 (lower is better)
Translates to: EEKLFLQEGQQCLQALGHPSLPC*PAVDVP
Trigger: AGGCACATCAACAGCAGGGCAACAAGGCAGAGAAGG...ATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CCA 90 bp GAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCAAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: ETVSAGRTAVPPGSWASSSCGPE*SEQRES
Trigger: GGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCT...TGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp GAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTGCAGGGAGTATGGCCTaGGCTTCAGATACCGCTGTT +
Preference number: 2 (lower is better)
Translates to: EKLFLQEGQQCLQALGHLAGSMA*ASDTAV
Trigger: AACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGC...AAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCGAGGCCCCTGCTCCTTaGAACCGGCCTTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGEAPAP*NRPSLP
Trigger: AGGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTC...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGACCTGGAAAGGCACTCTaGAGCAGCAGGATGGTCACA +
Preference number: 2 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRPGKAL*SSRMVT
Trigger: TGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGG...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR TCA 90 bp GTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACCCTGGACCCGAATGGAGTaGGCAAAGGGAGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: VDYLGTYCIFRPAGLVLPWTRME*AKGVQA
Trigger: GGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA...GGGTAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR TCA 90 bp AGCTGGCTTAGTGCTACCCATCTGAACCCCCAGATTACTACCCAAGTCTTCCTTGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: SWLSATHLNPQITTQVFLGWIHR*RRQGSW
Trigger: CCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCC...AAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR TCA 90 bp CAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTGGGTATTATCGTGGTTaGAGCACACAACTTTCTGCA +
Preference number: 2 (lower is better)
Translates to: QRTGQFHGTQGALDHDPSGYYRG*STQLSA
Trigger: TGCAGAAAGTTGTGTGCTTCAACCACGATAATACCC...AGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR GCA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGTACCTAGGAACTTATTaGATCTTTAGGCCAGCTGGC +
Preference number: 2 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQYLGTY*IFRPAG
Trigger: GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTA...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp AGCTGGCTTAGTGCTACCCATCTGAACCCCCAGATTACTACCCAAGTCTTCCTTAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: SWLSATHLNPQITTQVFLSCGPE*SEQRES
Trigger: GGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCT...AAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp AGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCCAGATACCGCTGTTCTaGATGGATCCACAGATGACG +
Preference number: 2 (lower is better)
Translates to: RNCFCRKDSSASRLLGIFQIPLF*MDPQMT
Trigger: CGTCATCTGTGGATCCATCCAGAACAGCGGTATCTG...GAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACAGGAGGCAGGGAGTATaGCCTGGGCTTCAGATACCG +
Preference number: 2 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYRRQGV*PGLQIP
Trigger: CGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp GAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCAACATTTCTTCTCTGCTaGGGCTGCTCCCTTCCTTTG +
Preference number: 2 (lower is better)
Translates to: ETVSAGRTAVPPGSWASSTFLLC*GCSLPL
Trigger: CAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGT...TGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR GCA 90 bp AGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACTTCTCTGCTGGGGCTaGTCCCTTCCTTTGTCGAGG +
Preference number: 2 (lower is better)
Translates to: RVDYLGTYCIFRPAGLVLLLCWG*SLPLSR
Trigger: CCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAG...TAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CCA 90 bp GTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACCCAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCC +
Preference number: 2 (lower is better)
Translates to: VDYLGTYCIFRPAGLVLPSCGPE*SEQRES
Trigger: GGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCT...GGGTAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACGCAGGGAGTATGGCCTaGGCTTCAGATACCGCTGTT +
Preference number: 2 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYAGSMA*ASDTAV
Trigger: AACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGC...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp CTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTATCTAGCCCCTCGTGCTaGGTTTCCGCTCCACATTTC +
Preference number: 2 (lower is better)
Translates to: LFLPNGLRFIFPFLKVRVSSPSC*VSAPHF
Trigger: GAAATGTGGAGCGGAAACCCAGCACGAGGGGCTAGA...TACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR TCA 90 bp CAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGTTAGTGCTACCCATCTaGACCCCCAGATTACTACCC +
Preference number: 2 (lower is better)
Translates to: QLFLPNGLRFIFPFLKVRLVLPI*TPRLLP
Trigger: GGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAA...CCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR GCA 90 bp TATCAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTACCTTTTGCCCCTTCCTaGCCTAACAGCAAGTACCAG +
Preference number: 2 (lower is better)
Translates to: YQLFLPNGLRFIFPFLKVPFAPS*PNSKYQ
Trigger: CTGGTACTTGCTGTTAGGGCAGGAAGGGGCAAAAGG...TACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CCA 90 bp GTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATGCAGGGAGTATGGCCTaGGCTTCAGATACCGCTGTT +
Preference number: 2 (lower is better)
Translates to: VHFPIPQGKGRLPRNLLHAGSMA*ASDTAV
Trigger: AACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGC...ATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR GCA 72 bp CAGGGAGGGGGCTGGCGCAGGCGCTTGTGGGGAATTTaGACTGTGAAGAGTCGCAGGCCAGCAGGCTGGTCT +
Preference number: 3 (lower is better)
Translates to: QGGGWRRRLWGI*TVKSRRPAGWS
Trigger: AGACCAGCCTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCCCCCTCCCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR TCA 72 bp GGGGCTGGCGCAGGCGCTTGTGGGGAATTTGCACTGTaGAGAGTCGCAGGCCAGCAGGCTGGTCTGGAACCT +
Preference number: 3 (lower is better)
Translates to: GAGAGACGEFAL*RVAGQQAGLEP
Trigger: AGGTTCCAGACCAGCCTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CAA 90 bp CAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCGAGGCCCCTGCTCCTaGGAACCGGCCTTCTCTGCC +
Preference number: 3 (lower is better)
Translates to: QRTGQFHGTQGALDHDPSRGPCS*EPAFSA
Trigger: GGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTCG...AGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 72 bp CTCGTGCTGGGTTTCCGCTCCACATTTCTTCTCTGCTaGGGCTGCTCCCTTCCTTTGTCGAGGCCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: LVLGFRSTFLLC*GCSLPLSRPLL
Trigger: GAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACCCAGCACGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 72 bp CTGGGTTTCCGCTCCACATTTCTTCTCTGCTGGGGCTaGTCCCTTCCTTTGTCGAGGCCCCTGCTCCTTGGA +
Preference number: 3 (lower is better)
Translates to: LGFRSTFLLCWG*SLPLSRPLLLG
Trigger: TCCAAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 72 bp AGCCACACAGGAACACTCCGCCGTGAGGGCAACAGATaGAGCTGGCAACGACTGTCCACAGCCACAGAGAAC +
Preference number: 3 (lower is better)
Translates to: SHTGTLRREGNR*SWQRLSTATEN
Trigger: GTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGTGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
3UTR CCA 72 bp CATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGC +
Preference number: 3 (lower is better)
Translates to: HLVSGNLSCGPE*SEQRESRPPLC
Trigger: GCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
3UTR CCA 72 bp ACAGGAACACTCCGCCGTGAGGGCAACAGATGCAGCTaGCAACGACTGTCCACAGCCACAGAGAACAGGGCA +
Preference number: 3 (lower is better)
Translates to: TGTLRREGNRCS*QRLSTATENRA
Trigger: TGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
3UTR-3UTR CAA 90 bp CAGGAACACTCCGCCGTGAGGGCAACAGATGCAGCTGGCAACGACTGTCCACAGTCCCCTTCGTGGGCTTaGAACTCCAGAACCTTCTCC +
Preference number: 3 (lower is better)
Translates to: QEHSAVRATDAAGNDCPQSPSWA*NSRTFS
Trigger: GGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGA...CTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 72 bp CGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATaGGACCCAAGGAGCTCTGGACCACGACCCTTCTCA +
Preference number: 3 (lower is better)
Translates to: RLSTATENRAVS*DPRSSGPRPFS
Trigger: TGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
3UTR-3UTR CAA 90 bp CGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGCTCTCAGTGCCCATTCATCTaGTCAGCGGCAACCTCAGCT +
Preference number: 3 (lower is better)
Translates to: RLSTATENRAVSWDPRSSQCPFI*SAATSA
Trigger: AGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTG...AGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR TCA 72 bp GGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCAGCTaGTCCTTCTGCCACACAGAGGCCTTAAGGTCCCGG +
Preference number: 3 (lower is better)
Translates to: GPFSCQCSCVTS*SFCHTEALRSR
Trigger: CCGGGACCTTAAGGCCTCTGTGTGGCAGAAGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAATGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 72 bp CCTGCCCAAACCTGCAGGCCTGGTAGCGGTAAGGTGTaGTGGAAAAGGTGGGTCCATTTTCTTGCCAGTGCA +
Preference number: 3 (lower is better)
Translates to: PAQTCRPGSGKV*WKRWVHFLASA
Trigger: TGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTTTGGGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 72 bp CCTTCTCAGGTAGAAAGGCCACATCCGTCACCACAATaGCATGGGCCTCCCTCACGTAGTAGAGGCACTGGA +
Preference number: 3 (lower is better)
Translates to: PSQVERPHPSPQ*HGPPSRSRGTG
Trigger: TCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGGCCTTTCTACCTGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
3UTR CCA 72 bp TCAGGCCCTAAAGCCAGGTCTTCAATCTCCCCTTCGTaGGCTTTGAACTCCAGAACCTTCTCCAGGCTGGGC +
Preference number: 3 (lower is better)
Translates to: SGPKARSSISPS*ALNSRTFSRLG
Trigger: GCCCAGCCTGGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGAAGACCTGGCTTTAGGGCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 72 bp GCCCAAACCTGCAGGCCTGGTAGCGGTAAGGTGTGCTaGAAAAGGTGGGTCCATTTTCTTGCCAGTGCAGCT +
Preference number: 3 (lower is better)
Translates to: AQTCRPGSGKVC*KRWVHFLASAA
Trigger: AGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTTTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR TCA 72 bp GGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGGGACCTGGAGTCACAC +
Preference number: 3 (lower is better)
Translates to: GFRYRCSGWIHR*RRQGSWDLESH
Trigger: GTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
3UTR TCA 72 bp GGAGAGAGAAAGCTATGTAGATGGCAACAGAGCCAGTaGCTGTGCCCAGGCCTAGGAAGGTGCCGGATTCAC +
Preference number: 3 (lower is better)
Translates to: GERKLCRWQQSQ*LCPGLGRCRIH
Trigger: GTGAATCCGGCACCTTCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCATCTACATAGCTTTCTCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 72 bp TGCAGTGGATCGGAGCTAAAGTCTGTCTGCACCGCCTaGAAATTCTCTACCCTGAGTTCTAGCCCCTCGTGC +
Preference number: 3 (lower is better)
Translates to: CSGSELKSVCTA*KFSTLSSSPSC
Trigger: GCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 72 bp TGCAGGCCTGGTAGCGGTAAGGTGTGCTGGAAAAGGTaGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCA +
Preference number: 3 (lower is better)
Translates to: CRPGSGKVCWKR*VHFLASAAVSP
Trigger: TGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CAA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGACAGTGCCCATTCATCTaGTCAGCGGCAACCTCAGCT +
Preference number: 3 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRQCPFI*SAATSA
Trigger: AGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTG...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CAA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACCTTGTTGCCCTGCTGTaGATGTGCCTGGAAGCGCAG +
Preference number: 3 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYLVALL*MCLEAQ
Trigger: CTGCGCTTCCAGGCACATCAACAGCAGGGCAACAAG...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CAA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCCCCACGGTTACCAACTaGCCATCAGGCCCTAAAGCC +
Preference number: 3 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGPTVTN*PSGPKA
Trigger: GGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGGG...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR GCA 72 bp AGCAGGGTATTATCGTGGTTGAAGCACACAACTTTCTaGAGTGGATCGGAGCTAAAGTCTGTCTGCACCGCC +
Preference number: 3 (lower is better)
Translates to: SRVLSWLKHTTF*SGSELKSVCTA
Trigger: GGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACCCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR CCA 72 bp CCATCTGTTCCTCCAGTGGCAAGCAGGGTATTATCGTaGTTGAAGCACACAACTTTCTGCAGTGGATCGGAG +
Preference number: 3 (lower is better)
Translates to: PSVPPVASRVLS*LKHTTFCSGSE
Trigger: CTCCGATCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACCCTGCTTGCCACTGGAGGAACAGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CAA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACACCCAAGTCTTCCTTTaGCCCCTTCCTGCCCTAACA +
Preference number: 3 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYTQVFL*PLPALT
Trigger: TGTTAGGGCAGGAAGGGGCAAAAGGAAGACTTGGGT...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR-3UTR CAA 90 bp GTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATGGCTGCTCCCTTCCTTaGTCGAGGCCCCTGCTCCTT +
Preference number: 3 (lower is better)
Translates to: VHFPIPQGKGRLPRNLLHGCSLP*SRPLLL
Trigger: AAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCC...ATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR TCA 72 bp TGCATCTTTAGGCCAGCTGGCTTAGTGCTACCCATCTaGACCCCCAGATTACTACCCAAGTCTTCCTTTTGC +
Preference number: 3 (lower is better)
Translates to: CIFRPAGLVLPI*TPRLLPKSSFC
Trigger: GCAAAAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAAGCCAGCTGGCCTAAAGATGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR CCA 72 bp GGTATTATCGTGGTTGAAGCACACAACTTTCTGCAGTaGATCGGAGCTAAAGTCTGTCTGCACCGCCTGCAA +
Preference number: 3 (lower is better)
Translates to: GIIVVEAHNFLQ*IGAKVCLHRLQ
Trigger: TTGCAGGCGGTGCAGACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
3UTR-3UTR CAA 90 bp CAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGAGTGCCTCCAGGCTCTaGGGCATCTTCACATGTTTC +
Preference number: 3 (lower is better)
Translates to: QLFLPNGLRFIFPFLKVRSASRL*GIFTCF
Trigger: GAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACT...CCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR GCA 72 bp TTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTaGATCTTTAGGCCAGCTGGCTTAGTGCTACCCATC +
Preference number: 3 (lower is better)
Translates to: FLKVRVDYLGTY*IFRPAGLVLPI
Trigger: GATGGGTAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR CAA 72 bp GCAGGGAGGGGGCTGGCGCAGGCGCTTGTGGGGAATTaGCACTGTGAAGAGTCGCAGGCCAGCAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: AGRGLAQALVGN*HCEESQASRLV
Trigger: GACCAGCCTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCCCCCTCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp CAGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGGCGGCACCCAGGACATaGCGCGCCGGGCCTTCGACT +
Preference number: 4 (lower is better)
Translates to: QAVPIHLVSGNLSCGPEWAAPRT*RAGPST
Trigger: AGTCGAAGGCCCGGCGCGGCATGTCCTGGGTGCCGC...CCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGCTCCGCCCGCAGCGATaGGCAGCCCAGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQLRPQR*AAQCWG
Trigger: ACCCCAGCACTGGGCTGCTCATCGCTGCGGGCGGAG...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGAGCCCGGTACAGCTCTaGCGCCCGGCGCCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FILSAATSAVDPNGVSKGSPVQL*RPAPAH
Trigger: ATGGGCCGGCGCCGGGCGCCAGAGCTGTACCGGGCT...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TCTGGACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCACCACAATGCCAAGCCCGGTACAGCTCTaGCGCCCGGCGCCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: SGPRPFSGRKATSVTTMPSPVQL*RPAPAH
Trigger: ATGGGCCGGCGCCGGGCGCCAGAGCTGTACCGGGCT...TGGCATTGTGGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp CAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGGCGGCACCCAGGACATaGCGCGCCGGGCCTTCGACT +
Preference number: 4 (lower is better)
Translates to: QGVWPGLQIPLFWMDPQMAAPRT*RAGPST
Trigger: AGTCGAAGGCCCGGCGCGGCATGTCCTGGGTGCCGC...CATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp AGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCAGCCCGGTACAGCTCTaGCGCCCGGCGCCGGCCCAT +
Preference number: 4 (lower is better)
Translates to: RNCFCRKDSSASRLLGIFSPVQL*RPAPAH
Trigger: ATGGGCCGGCGCCGGGCGCCAGAGCTGTACCGGGCT...GAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp TCGTGCTGGGTTTCCGCTCCACATTTCTTCTCTGCTGGGGCTGCTCCCTTCCTTGTGCTGGGGTCGACCTaGAGCGCGTACAACGGGAAC +
Preference number: 4 (lower is better)
Translates to: SCWVSAPHFFSAGAAPFLVLGST*SAYNGN
Trigger: GTTCCCGTTGTACGCGCTTCAGGTCGACCCCAGCAC...AAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACCCAGCACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp GAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACATGGAAGCGCAGGAGCTaGCAGTGGGCATCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: EAGSMAWASDTAVLDGSTWKRRS*QWASCP
Trigger: AGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCA...TGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp AGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGAAGCGCAGGAGCTaGCAGTGGGCATCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSTLEPLVGRRKEAGSMAWKRRS*QWASCP
Trigger: AGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCA...GGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp CCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGAGCCATCCCAGGCTGTaGGGTAGCAGGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: PGLQIPLFWMDPQMTKARSHPRL*GSREGA
Trigger: AGCCCCCTCCCTGCTACCTCACAGCCTGGGATGGCT...CCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTGGCAACAGAGCCAGTaGCTGTGCCCAGGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: NSGASGRQKKGGREYGLGWQQSQ*LCPGLG
Trigger: TCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCA...GCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp TCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCTGGACCCGAATGGAGTaGGCAAAGGGAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SGASGRQKKGGREYGLGFWTRME*AKGVQA
Trigger: GGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA...GAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp GGACCCGAATGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATGGCTGGTCTGGAACCTaGCCAAACCTGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: GPEWSEQRESRPPLCSRDGWSGT*PNLQAW
Trigger: CCAGGCCTGCAGGTTTGGGCAGGTTCCAGACCAGCC...ATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
CDS-3UTR CCA 90 bp TCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGTCTTTATGCCTGTCTTaGCGGCGCCTCCTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: STLEPLVGRRKEAGSMAWSLCLS*RRLLRP
Trigger: CGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGA...CCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CAGATGACGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATAGCCAAGAGGCCCCTGCTCCTTaGAACCGGCCTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: QMTKARFLGPGVTQGHSQEAPAP*NRPSLP
Trigger: AGGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTC...TTGGCTATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp ACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGCTCTGGGAGGCCCCTGCTCCTTaGAACCGGCCTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: TVHSHREQGSFMGPKELWEAPAP*NRPSLP
Trigger: AGGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTC...CCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp GAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACACGCAGGCCAGCAGGCTaGTCTGGAACCTGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: EAGSMAWASDTAVLDGSTRRPAG*SGTCPN
Trigger: GTTTGGGCAGGTTCCAGACCAGCCTGCTGGCCTGCG...TGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCCGCAGGCCAGCAGGCTaGTCTGGAACCTGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: CPFILSAATSAVDPNGVSRRPAG*SGTCPN
Trigger: GTTTGGGCAGGTTCCAGACCAGCCTGCTGGCCTGCG...GCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
CDS-3UTR CCA 90 bp GGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGAGGACCCAAGGAGCTCTaGACCACGACCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GASGRQKKGGREYGLGFRGPKEL*TTTLLR
Trigger: CCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCC...TCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp GAAAGGCCACATCCGTCACCACAATGCCATGGGCCTCCCTCACGTAGTAGAGGCGGACCCAAGGAGCTCTaGACCACGACCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: ERPHPSPQCHGPPSRSRGGPKEL*TTTLLR
Trigger: CCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCC...GCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGGCCTTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR CCA 90 bp CCACATCCGTCACCACAATGCCATGGGCCTCCCTCACGTAGTAGAGGCACTGGAGGACCCAAGGAGCTCTaGACCACGACCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: PHPSPQCHGPPSRSRGTGGPKEL*TTTLLR
Trigger: CCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCC...TCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR TCA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGGTGCTGGGGTCGACCTaGAGCGCGTACAACGGGAAC +
Preference number: 4 (lower is better)
Translates to: FILSAATSAVDPNGVSKGVLGST*SAYNGN
Trigger: GTTCCCGTTGTACGCGCTTCAGGTCGACCCCAGCAC...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp CAACAGATGCAGCTGGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCTGGAAGCGCAGGAGCTaGCAGTGGGCATCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QQMQLATTVHSHREQGSFWKRRS*QWASCP
Trigger: AGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCA...GAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp CAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCACCATGGCAACAGAGCCAGTaGCTGTGCCCAGGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: QGALDHDPSQVERPHPSPWQQSQ*LCPGLG
Trigger: TCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCA...TGGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR TCA 90 bp CAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCACCAAGGAACACTCCGCCGTaGGGGCAACAGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: QGALDHDPSQVERPHPSPRNTPP*GQQMQL
Trigger: CAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCT...TGGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR TCA 90 bp GGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGAAGGAACACTCCGCCGTaGGGGCAACAGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GREYGLGFRYRCSGWIHRRNTPP*GQQMQL
Trigger: CAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCT...TCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp TGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCTGGACCCGAATGGAGTaGGCAAAGGGAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CPFILSAATSAVDPNGVSWTRME*AKGVQA
Trigger: GGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA...GCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp GGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAATGGACCCGAATGGAGTaGGCAAAGGGAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GQFHGTQGALDHDPSQVEWTRME*AKGVQA
Trigger: GGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA...TTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp TCCTGCCCTAACAGCAAGTACCAGGCCAGTCCCTTCCCCAGCAAATGCCAGGGGGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SCPNSKYQASPFPSKCQGGWIHR*RRQGSW
Trigger: CCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCC...CCCCTGGCATTTGCTGGGGAAGGGACTGGCCTGGTACTTGCTGTTAGGGCAGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp GATGTGCCTGGAAGCGCAGGAGCTGACAGTGGGCATCCTGCCCTGCAGCAAGGAGGTAGCGGTAAGGTGTaGTGGAAAAGGTGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: DVPGSAGADSGHPALQQGGSGKV*WKRWVH
Trigger: ATGGACCCACCTTTTCCAGCACACCTTACCGCTACC...TCCTTGCTGCAGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCAGGCACATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp TCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCCATCCGTCACCACAATaGCATGGGCCTCCCTCACGT +
Preference number: 4 (lower is better)
Translates to: SGASGRQKKGGREYGLGFHPSPQ*HGPPSR
Trigger: ACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATG...GAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp TCCTGCCCTAACAGCAAGTACCAGGCCAGTCCCTTCCCCAGCAAATGCCAGGGGTCCAGGCCTCCACTCTaGTCTAGAGATGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SCPNSKYQASPFPSKCQGSRPPL*SRDGSV
Trigger: GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGA...CCCCTGGCATTTGCTGGGGAAGGGACTGGCCTGGTACTTGCTGTTAGGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp AGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCCCAGGCCTAGGAAGGTaGCGGATTCACTGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSTLEPLVGRRKEAGSMAPGLGR*RIHCRP
Trigger: AGGCCTGCAGTGAATCCGGCACCTTCCTAGGCCTGG...GGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406567.7
CDS-3UTR CCA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGGCCAGCAGGCTGGTCTaGAACCTGCCCAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQASRLV*NLPKPA
Trigger: TGCAGGTTTGGGCAGGTTCCAGACCAGCCTGCTGGC...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000444452.5
CDS-3UTR CCA 90 bp GTCCAGGCTCCTGATTCCCAGGAAGCAGGGAAGCTAAAGGAAACCTGGAAAGGCCGCAGGCCAGCAGGCTaGTCTGGAACCTGCCCAAAC +
Preference number: 4 (lower is better)
Translates to: VQAPDSQEAGKLKETWKGRRPAG*SGTCPN
Trigger: GTTTGGGCAGGTTCCAGACCAGCCTGCTGGCCTGCG...GCCTTTCCAGGTTTCCTTTAGCTTCCCTGCTTCCTGGGAATCAGGAGCCTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430533.1
ENST00000444452.5
CDS-3UTR CCA 90 bp GGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGAGGACCCAAGGAGCTCTaGACCACGACCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: GREYGLGFRYRCSGWIHRGPKEL*TTTLLR
Trigger: CCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCC...TCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCGGCAACAGATGCAGCTaGCAACGACTGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: NSGASGRQKKGGREYGLGGNRCS*QRLSTA
Trigger: GGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCC...GCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp TCCTGCCCTAACAGCAAGTACCAGGCCAGTCCCTTCCCCAGCAAATGCCAGGGGGTGCCAAGTTCATGGTaGCCCGTGTCTCACGCCATT +
Preference number: 4 (lower is better)
Translates to: SCPNSKYQASPFPSKCQGVPSSW*PVSHAI
Trigger: AATGGCGTGAGACACGGGCCACCATGAACTTGGCAC...CCCCTGGCATTTGCTGGGGAAGGGACTGGCCTGGTACTTGCTGTTAGGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCCTCCGCCCGCAGCGATaGGCAGCCCAGTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGLRPQR*AAQCWG
Trigger: ACCCCAGCACTGGGCTGCTCATCGCTGCGGGCGGAG...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp GGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAATTGTTGCCCTGCTGTTaGTGTGCCTGGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GQFHGTQGALDHDPSQVELLPCC*CAWKRR
Trigger: CCTGCGCTTCCAGGCACATCAACAGCAGGGCAACAA...TTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp GGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGACCCCTTCGTGGGCTTTaGACTCCAGAACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GASGRQKKGGREYGLGFRPLRGL*TPEPSP
Trigger: TGGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGG...TCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp AACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCAGCTGTGTCACCAGCTaGTCCTTCTGCCACACAGAG +
Preference number: 4 (lower is better)
Translates to: NSGASGRQKKGGREYGLGSCVTS*SFCHTE
Trigger: CTCTGTGTGGCAGAAGGATCAGCTGGTGACACAGCT...GCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp AGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGGGGAATTTGCACTGTaGAGAGTCGCAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RQCPFILSAATSAVDPNGGEFAL*RVAGQQ
Trigger: CTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCC...TCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCGGGGAATTTGCACTGTaGAGAGTCGCAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: KEAGSMAWASDTAVLDGSGEFAL*RVAGQQ
Trigger: CTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCC...GGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp CAGATGACGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATAGCCAAGGGGAATTTGCACTGTaGAGAGTCGCAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QMTKARFLGPGVTQGHSQGEFAL*RVAGQQ
Trigger: CTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCC...TTGGCTATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AAGGACAAGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTGGCAACAGAGCCAGTaGCTGTGCCCAGGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: KDKLNSGASGRQKKGGREWQQSQ*LCPGLG
Trigger: TCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCA...CTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGTGGCAACAGAGCCAGTaGCTGTGCCCAGGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: FILSAATSAVDPNGVSKGWQQSQ*LCPGLG
Trigger: TCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCA...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp CCAGACACGGACGTAGCCATCTGTTCCTCCAGTGGCAAGCAGGGTATTATCGTGTGGCAACAGAGCCAGTaGCTGTGCCCAGGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: PDTDVAICSSSGKQGIIVWQQSQ*LCPGLG
Trigger: TCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCA...CACGATAATACCCTGCTTGCCACTGGAGGAACAGATGGCTACGTCCGTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp GAGGAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATAGGAACACTCCGCCGTaGGGGCAACAGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EEKLFLQEGQQCLQALGHRNTPP*GQQMQL
Trigger: CAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCT...ATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp GAGGAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATTGGACCCGAATGGAGTaGGCAAAGGGAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EEKLFLQEGQQCLQALGHWTRME*AKGVQA
Trigger: GGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA...ATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp GAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGTGGACCCGAATGGAGTaGGCAAAGGGAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EERRQGVWPGLQIPLFWMWTRME*AKGVQA
Trigger: GGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCCA...CATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp GAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAACAGGAACACTCCCGTaGGGGCAACAGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EAGSMAWASDTAVLDGSTTGTLP*GQQMQL
Trigger: CAGCTGCATCTGTTGCCCTCACGGGAGTGTTCCTGT...TGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456259.5
CDS-3UTR GCA 90 bp AGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCAGATGTCACCAGCCAGTaGCAAGTTCATGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: RRQGVWPGLQIPLFWMDPDVTSQ*QVHGGP
Trigger: CGGGCCACCATGAACTTGGCACTGGCTGGTGACATC...TGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGGATGTCACCAGCCAGTaGCAAGTTCATGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: ATTVHSHREQGSFMGPKEDVTSQ*QVHGGP
Trigger: CGGGCCACCATGAACTTGGCACTGGCTGGTGACATC...CTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp AGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGGAACCGGCCTTCTCTaGCTTGTTGCCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RQCPFILSAATSAVDPNGGTGLL*LVALLL
Trigger: CAACAGCAGGGCAACAAGGCAGAGAAGGCCGGTTCC...TCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GAGGAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTTGTCGAGGCCCCTaGTCCTTGGAACCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: EEKLFLQEGQQCLQALGHLCRGP*SLEPAF
Trigger: GAAGGCCGGTTCCAAGGAGCAGGGGCCTCGACAAAG...ATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGACTTCTCTGCTGGGGCTaGTCCCTTCCTTTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GREYGLGFRYRCSGWIHRLLCWG*SLPLSR
Trigger: CCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAG...TCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp ATGTGCCTGGAAGCGCAGGAGCTGACAGTGGGCATCCTGCCCTGCAGCAAGGATCCACGGTTACCAACTTaGCATCAGGCCCTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: MCLEAQELTVGILPCSKDPRLPT*HQALKP
Trigger: TGGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGG...ATCCTTGCTGCAGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCAGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp AGGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGACATCCGTCACCACAATaGCATGGGCCTCCCTCACGT +
Preference number: 4 (lower is better)
Translates to: RAVSWDPRSSGPRPFSGRHPSPQ*HGPPSR
Trigger: ACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATG...TCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR GCA 90 bp AGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCCATCCGTCACCACAATaGCATGGGCCTCCCTCACGT +
Preference number: 4 (lower is better)
Translates to: SSTLEPLVGRRKEAGSMAHPSPQ*HGPPSR
Trigger: ACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATG...GGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGCGTGAGGGCAACAGATaGAGCTGGCAACGACTGTCC +
Preference number: 4 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQREGNR*SWQRLS
Trigger: GGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACG...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp AGGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGACGTGAGGGCAACAGATaGAGCTGGCAACGACTGTCC +
Preference number: 4 (lower is better)
Translates to: RAVSWDPRSSGPRPFSGRREGNR*SWQRLS
Trigger: GGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACG...TCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR GCA 90 bp GACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCTCCAGGCCTCCACTCTaGTCTAGAGATGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: DPRSSGPRPFSGRKATSVSRPPL*SRDGSV
Trigger: GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGA...GACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp CCACATCCGTCACCACAATGCCATGGGCCTCCCTCACGTAGTAGAGGCACTGGACCCTTCCCCAGCAAATaGCAGGGGCTTCATGTGAAG +
Preference number: 4 (lower is better)
Translates to: PHPSPQCHGPPSRSRGTGPFPSK*QGLHVK
Trigger: CTTCACATGAAGCCCCTGGCATTTGCTGGGGAAGGG...TCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGATCTTTATGCCTGTCTTaGCGGCGCCTCCTCCGCCCG +
Preference number: 4 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRSLCLS*RRLLRP
Trigger: CGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGA...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CAGATGACGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATAGCCAAGAACCTTCTCCAGGCTaGGCACCTTCCAGACACGGA +
Preference number: 4 (lower is better)
Translates to: QMTKARFLGPGVTQGHSQEPSPG*APSRHG
Trigger: TCCGTGTCTGGAAGGTGCCCAGCCTGGAGAAGGTTC...TTGGCTATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGGCCAGCAGGCTGGTCTaGAACCTGCCCAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: FILSAATSAVDPNGVSKGASRLV*NLPKPA
Trigger: TGCAGGTTTGGGCAGGTTCCAGACCAGCCTGCTGGC...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
CDS-3UTR CCA 90 bp AACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCCATGGCCACAGGACTTaGTCCGAAGGGGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: NSGASGRQKKGGREYGLGHGHRT*SEGARS
Trigger: ACTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATG...GCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGGCAACAGATGCAGCTaGCAACGACTGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: RQCPFILSAATSAVDPNGGNRCS*QRLSTA
Trigger: GGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCC...TCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp GCTGGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAAGGCAACAGATGCAGCTaGCAACGACTGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: AGNDCPQPQRTGQFHGTQGNRCS*QRLSTA
Trigger: GGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCC...TTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR CCA 90 bp TGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATGGCAGTGTCGGCAACAGATGCAGCTaGCAACGACTGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: WSEQRESRPPLCSRDGSVGNRCS*QRLSTA
Trigger: GGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCC...GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SGASGRQKKGGREYGLGFSCGPE*SEQRES
Trigger: GGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCT...GAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCAGGAGGCAGGGAGTATaGCCTGGGCTTCAGATACCG +
Preference number: 4 (lower is better)
Translates to: KEAGSMAWASDTAVLDGSRRQGV*PGLQIP
Trigger: CGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT...GGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCAGGAGGCAGGGAGTATaGCCTGGGCTTCAGATACCG +
Preference number: 4 (lower is better)
Translates to: SSTLEPLVGRRKEAGSMARRQGV*PGLQIP
Trigger: CGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT...GGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp GGACCCGAATGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATCCCCTTCGTGGGCTTTaGACTCCAGAACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GPEWSEQRESRPPLCSRDPLRGL*TPEPSP
Trigger: TGGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGG...ATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp AAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCAGCTGTGTCACCAGCTaGTCCTTCTGCCACACAGAG +
Preference number: 4 (lower is better)
Translates to: KEAGSMAWASDTAVLDGSSCVTS*SFCHTE
Trigger: CTCTGTGTGGCAGAAGGATCAGCTGGTGACACAGCT...GGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp CACGTAGTAGAGGCACTGGAGAGAGAAAGCTATGTAGATGGCAACAGAGCCAGTAGCCATCCCAGGCTGTaGGGTAGCAGGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: HVVEALERESYVDGNRASSHPRL*GSREGA
Trigger: AGCCCCCTCCCTGCTACCTCACAGCCTGGGATGGCT...ACTGGCTCTGTTGCCATCTACATAGCTTTCTCTCTCCAGTGCCTCTACTACGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp CCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAAGGAACACTCCGCCGTaGGGGCAACAGATGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PFILSAATSAVDPNGVSKRNTPP*GQQMQL
Trigger: CAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCT...TTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp GGACCCGAATGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: GPEWSEQRESRPPLCSRDGWIHR*RRQGSW
Trigger: CCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCC...ATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
CDS-3UTR TCA 90 bp CGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGCTCTGCAATGTCTCACACCTaGCATCGAGGCAGGAGACGA +
Preference number: 4 (lower is better)
Translates to: RLSTATENRAVSWDPRSSAMSHT*HRGRRR
Trigger: TCGTCTCCTGCCTCGATGTCAGGTGTGAGACATTGC...AGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441451.1
CDS-3UTR GCA 90 bp ATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGAGTCTTCTCTGCTGGGGCTaGTCCCTTCCTTTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: ILSAATSAVDPNGVSKGSLLCWG*SLPLSR
Trigger: CCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAG...ACTCCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATGGCAGTGTCAGTTCTAGCCCCTCGTaGTGGGTTTCCGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: WSEQRESRPPLCSRDGSVSSSPS*WVSAPH
Trigger: ATGTGGAGCGGAAACCCAGCACGAGGGGCTAGAACT...GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGAGTTCTAGCCCCTCGTaGTGGGTTTCCGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: AEERRQGVWPGLQIPLFWSSSPS*WVSAPH
Trigger: ATGTGGAGCGGAAACCCAGCACGAGGGGCTAGAACT...CCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGAGGTAGCGGTAAGGTGTaGTGGAAAAGGTGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: GASGRQKKGGREYGLGFRGSGKV*WKRWVH
Trigger: ATGGACCCACCTTTTCCAGCACACCTTACCGCTACC...TCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTTGGCTGGTCTGGAACCTaGCCAAACCTGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: WASDTAVLDGSTDDEGKVGWSGT*PNLQAW
Trigger: CCAGGCCTGCAGGTTTGGGCAGGTTCCAGACCAGCC...AACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
CDS-3UTR GCA 90 bp ATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGAGTCATCCGTCACCACAATaGCATGGGCCTCCCTCACGT +
Preference number: 4 (lower is better)
Translates to: ILSAATSAVDPNGVSKGSHPSPQ*HGPPSR
Trigger: ACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATG...ACTCCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGCATCCGTCACCACAATaGCATGGGCCTCCCTCACGT +
Preference number: 4 (lower is better)
Translates to: FILSAATSAVDPNGVSKGHPSPQ*HGPPSR
Trigger: ACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATG...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp CCAGACACGGACGTAGCCATCTGTTCCTCCAGTGGCAAGCAGGGTATTATCGTGCGTGAGGGCAACAGATaGAGCTGGCAACGACTGTCC +
Preference number: 4 (lower is better)
Translates to: PDTDVAICSSSGKQGIIVREGNR*SWQRLS
Trigger: GGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACG...CACGATAATACCCTGCTTGCCACTGGAGGAACAGATGGCTACGTCCGTGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp ATGTGCCTGGAAGCGCAGGAGCTGACAGTGGGCATCCTGCCCTGCAGCAAGGATAGGAGAAACTGTTTCTaGAGGAAGGACAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: MCLEAQELTVGILPCSKDRRNCF*RKDSSA
Trigger: GGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCT...ATCCTTGCTGCAGGGCAGGATGCCCACTGTCAGCTCCTGCGCTTCCAGGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp TCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCCCTTTTGCCCCTTCCTaGCCTAACAGCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SGASGRQKKGGREYGLGFPFAPS*PNSKYQ
Trigger: CTGGTACTTGCTGTTAGGGCAGGAAGGGGCAAAAGG...GAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp CAGATGACGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATAGCCAATCTAGCCCCTCGTGCTaGGTTTCCGCTCCACATTTC +
Preference number: 4 (lower is better)
Translates to: QMTKARFLGPGVTQGHSQSSPSC*VSAPHF
Trigger: GAAATGTGGAGCGGAAACCCAGCACGAGGGGCTAGA...TTGGCTATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGTCTAGCCCCTCGTGCTaGGTTTCCGCTCCACATTTC +
Preference number: 4 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQSSPSC*VSAPHF
Trigger: GAAATGTGGAGCGGAAACCCAGCACGAGGGGCTAGA...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp AAGGACAAGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGGAACCTTCTCCAGGCTaGGCACCTTCCAGACACGGA +
Preference number: 4 (lower is better)
Translates to: KDKLNSGASGRQKKGGREEPSPG*APSRHG
Trigger: TCCGTGTCTGGAAGGTGCCCAGCCTGGAGAAGGTTC...CTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CCAGACACGGACGTAGCCATCTGTTCCTCCAGTGGCAAGCAGGGTATTATCGTGGAACCTTCTCCAGGCTaGGCACCTTCCAGACACGGA +
Preference number: 4 (lower is better)
Translates to: PDTDVAICSSSGKQGIIVEPSPG*APSRHG
Trigger: TCCGTGTCTGGAAGGTGCCCAGCCTGGAGAAGGTTC...CACGATAATACCCTGCTTGCCACTGGAGGAACAGATGGCTACGTCCGTGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGAGCCAGCAGGCTGGTCTaGAACCTGCCCAAACCTGCA +
Preference number: 4 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRASRLV*NLPKPA
Trigger: TGCAGGTTTGGGCAGGTTCCAGACCAGCCTGCTGGC...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000444452.5
CDS-3UTR CCA 90 bp AGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGACATGGCCACAGGACTTaGTCCGAAGGGGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RQCPFILSAATSAVDPNGHGHRT*SEGARS
Trigger: ACTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATG...TCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGACCCAAGGAGCTCTaGACCACGACCCTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: RRKEAGSMAWASDTAVLDGPKEL*TTTLLR
Trigger: CCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCC...ATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp CCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCACCAACAGGGCAGTTTCATaGGACCCAAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: PRSSGPRPFSGRKATSVTNRAVS*DPRSSG
Trigger: TCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTT...GGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR CCA 90 bp GAGGAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATGGCAACAGATGCAGCTaGCAACGACTGTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: EEKLFLQEGQQCLQALGHGNRCS*QRLSTA
Trigger: GGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCC...ATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp TGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCCCTGGAAAGGCACTCTaGAGCAGCAGGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: CPFILSAATSAVDPNGVSPGKAL*SSRMVT
Trigger: TGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGG...GCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQSCGPE*SEQRES
Trigger: GGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCT...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp TGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATGGCAGTGTCAGCTGTGGACCCGAATaGAGTGAGCAAAGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: WSEQRESRPPLCSRDGSVSCGPE*SEQRES
Trigger: GGACTCCCTTTGCTCACTCCATTCGGGTCCACAGCT...GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
CDS-3UTR CCA 90 bp GAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGAGGAGGCAGGGAGTATaGCCTGGGCTTCAGATACCG +
Preference number: 4 (lower is better)
Translates to: EERRQGVWPGLQIPLFWMRRQGV*PGLQIP
Trigger: CGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT...CATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCGCAAATTCTCTACCCTaGGTTCTAGCCCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: KEAGSMAWASDTAVLDGSANSLP*VLAPRA
Trigger: AGCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGC...GGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp GTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGCCGCAAATTCTCTACCCTaGGTTCTAGCCCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: VSWDPRSSGPRPFSGRKAANSLP*VLAPRA
Trigger: AGCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGC...GGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCAGCCATCCCAGGCTGTaGGGTAGCAGGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGSHPRL*GSREGA
Trigger: AGCCCCCTCCCTGCTACCTCACAGCCTGGGATGGCT...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp GAGGAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTCACACCGGGGAGTTaGCAAAACCCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: EEKLFLQEGQQCLQALGHLTPGS*QNPDHQ
Trigger: CTGATGGTCAGGGTTTTGGCAACTCCCCGGTGTGAG...ATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGCTTCTCTGCTGGGGCTaGTCCCTTCCTTTGTCGAGG +
Preference number: 4 (lower is better)
Translates to: VWPGLQIPLFWMDPQMTKLLCWG*SLPLSR
Trigger: CCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAG...CTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp AAAGGCCACATCCGTCACCACAATGCCATGGGCCTCCCTCACGTAGTAGAGGCATCCACATTTCTTCTCTaGTGGGGCTGCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: KGHIRHHNAMGLPHVVEASTFLL*WGCSLP
Trigger: AGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGA...TGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGGCCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp CCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGAGTTCTAGCCCCTCGTaGTGGGTTTCCGCTCCACAT +
Preference number: 4 (lower is better)
Translates to: PGLQIPLFWMDPQMTKARSSSPS*WVSAPH
Trigger: ATGTGGAGCGGAAACCCAGCACGAGGGGCTAGAACT...CCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp ACACAGGAACACTCCGCCGTGAGGGCAACAGATGCAGCTGGCAACGACTGTCCATCTGTCTGCACCGCCTaGAAATTCTCTACCCTGAGT +
Preference number: 4 (lower is better)
Translates to: TQEHSAVRATDAAGNDCPSVCTA*KFSTLS
Trigger: ACTCAGGGTAGAGAATTTGCAGGCGGTGCAGACAGA...TGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp GAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCAGAACCTGCCCAAACCTaGAGGCCTGGTAGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: ETVSAGRTAVPPGSWASSEPAQT*RPGSGK
Trigger: CTTACCGCTACCAGGCCTGCAGGTTTGGGCAGGTTC...TGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000444452.5
CDS-3UTR GCA 90 bp ATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGAGTTCCAGGCCTCCACTCTaGTCTAGAGATGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: ILSAATSAVDPNGVSKGSSRPPL*SRDGSV
Trigger: GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGA...ACTCCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp CAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGTCCAGGCCTCCACTCTaGTCTAGAGATGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: QGVWPGLQIPLFWMDPQMSRPPL*SRDGSV
Trigger: GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGA...CATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp GTCACACAGGGCCATAGCCAAGCCTTTTCACTAGAAGGGCAGGCAGTGCCCATTCCCTTCCCCAGCAAATaGCAGGGGCTTCATGTGAAG +
Preference number: 4 (lower is better)
Translates to: VTQGHSQAFSLEGQAVPIPFPSK*QGLHVK
Trigger: CTTCACATGAAGCCCCTGGCATTTGCTGGGGAAGGG...AATGGGCACTGCCTGCCCTTCTAGTGAAAAGGCTTGGCTATGGCCCTGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGCGTGTCTCTGTGTCATaGGAGTGCAGCAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FILSAATSAVDPNGVSKGRVSVS*ECSKEA
Trigger: TGCCTCCTTGCTGCACTCCCATGACACAGAGACACG...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000406567.7
CDS-3UTR CCA 90 bp TCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGTGCCAAGTTCATGGTaGCCCGTGTCTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: STLEPLVGRRKEAGSMAWVPSSW*PVSLCH
Trigger: ATGACACAGAGACACGGGCCACCATGAACTTGGCAC...CCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000406567.7
CDS-3UTR CCA 90 bp CCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCACCTCAATCTCCCCTTCGTaGGCTTTGAACTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: PRSSGPRPFSGRKATSVTSISPS*ALNSRT
Trigger: GGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGA...GGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp ATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGAGTTGGCGCAGGCGCTTGTaGGGAATTTGCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: ILSAATSAVDPNGVSKGSWRRRL*GICTVK
Trigger: CTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCA...ACTCCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp CAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGTGGCGCAGGCGCTTGTaGGGAATTTGCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: QGVWPGLQIPLFWMDPQMWRRRL*GICTVK
Trigger: CTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCA...CATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp TGGAGCAGCAGGATGGTCACAATAATAAGCCCGACACACAGCAGGAGCAGGAGCCATGGCCACAGGACTTaGTCCGAAGGGGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: WSSRMVTIISPTHSRSRSHGHRT*SEGARS
Trigger: ACTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATG...GCTCCTGCTCCTGCTGTGTGTCGGGCTTATTATTGTGACCATCCTGCTGCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp TGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATGGCAGTGTCAACAGGGCAGTTTCATaGGACCCAAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: WSEQRESRPPLCSRDGSVNRAVS*DPRSSG
Trigger: TCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTT...GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTAACAGGGCAGTTTCATaGGACCCAAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QRTGQFHGTQGALDHDPSNRAVS*DPRSSG
Trigger: TCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTT...AGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441451.1
ENST00000444452.5
CDS-3UTR CCA 90 bp AGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCAACAGGGCAGTTTCATaGGACCCAAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSTLEPLVGRRKEAGSMANRAVS*DPRSSG
Trigger: TCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTT...GGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGCAGCAGGATGGTCACAATAATAAGCCCGACACACAGCAGGAGCAGGAGCCACCCTGGAAAGGCACTCTaGAGCAGCAGGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: SSRMVTIISPTHSRSRSHPGKAL*SSRMVT
Trigger: TGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGG...GTGGCTCCTGCTCCTGCTGTGTGTCGGGCTTATTATTGTGACCATCCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp AACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACAAGGAGGCAGGGAGTATaGCCTGGGCTTCAGATACCG +
Preference number: 4 (lower is better)
Translates to: NCFCRKDSSASRLLGIFTRRQGV*PGLQIP
Trigger: CGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT...TGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp TGTGCTGGAAAAGGTGGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCAGCTGCCCCTTCGTGGGCTTTaGACTCCAGAACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CAGKGGSIFLPVQLCHQLPLRGL*TPEPSP
Trigger: TGGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGG...CAGCTGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp TGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTTGGGGAATTTGCACTGTaGAGAGTCGCAGGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WASDTAVLDGSTDDEGKVGEFAL*RVAGQQ
Trigger: CTGCTGGCCTGCGACTCTTCACAGTGCAAATTCCCC...AACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp CAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGAGCCATCCCAGGCTGTaGGGTAGCAGGGAGGGGGCT +
Preference number: 4 (lower is better)
Translates to: QLFLPNGLRFIFPFLKVRSHPRL*GSREGA
Trigger: AGCCCCCTCCCTGCTACCTCACAGCCTGGGATGGCT...CCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp CCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: PFILSAATSAVDPNGVSKGWIHR*RRQGSW
Trigger: CCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCC...TTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp GTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: VWPGLQIPLFWMDPQMTKGWIHR*RRQGSW
Trigger: CCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCC...CTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATGGATCCACAGATaGCGAAGGCAAGGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RRKEAGSMAWASDTAVLDGWIHR*RRQGSW
Trigger: CCAGGAACCTTGCCTTCGTCATCTGTGGATCCATCC...ATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp TGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATGGCAGTGTCTTAGTGCTACCCATCTaGACCCCCAGATTACTACCC +
Preference number: 4 (lower is better)
Translates to: WSEQRESRPPLCSRDGSVLVLPI*TPRLLP
Trigger: GGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAA...GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp AGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCATTAGTGCTACCCATCTaGACCCCCAGATTACTACCC +
Preference number: 4 (lower is better)
Translates to: RRQGVWPGLQIPLFWMDPLVLPI*TPRLLP
Trigger: GGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAA...TGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGATCCTGCCTAATGGGCTaGGGTTCATTTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RQCPFILSAATSAVDPNGSCLMG*GSFSHS
Trigger: GGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGA...TCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGTCCTGCCTAATGGGCTaGGGTTCATTTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQSCLMG*GSFSHS
Trigger: GGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGA...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGACTCACACCGGGGAGTTaGCAAAACCCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRLTPGS*QNPDHQ
Trigger: CTGATGGTCAGGGTTTTGGCAACTCCCCGGTGTGAG...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CTCCCTCACGTAGTAGAGGCACTGGAGAGAGAAAGCTATGTAGATGGCAACAGACTTTGTCGAGGCCCCTaGTCCTTGGAACCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LPHVVEALERESYVDGNRLCRGP*SLEPAF
Trigger: GAAGGCCGGTTCCAAGGAGCAGGGGCCTCGACAAAG...TCTGTTGCCATCTACATAGCTTTCTCTCTCCAGTGCCTCTACTACGTGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp GAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACATCTGTCTGCACCGCCTaGAAATTCTCTACCCTGAGT +
Preference number: 4 (lower is better)
Translates to: EAGSMAWASDTAVLDGSTSVCTA*KFSTLS
Trigger: ACTCAGGGTAGAGAATTTGCAGGCGGTGCAGACAGA...TGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CAGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGGAGCTAAAGTCTGTCTaGACCGCCTGCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: QAVPIHLVSGNLSCGPEWELKSV*TACKFS
Trigger: AGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTC...CCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp ACACAGGAACACTCCGCCGTGAGGGCAACAGATGCAGCTGGCAACGACTGTCCAGAGCTAAAGTCTGTCTaGACCGCCTGCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: TQEHSAVRATDAAGNDCPELKSV*TACKFS
Trigger: AGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTC...TGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGCGGAGTGTTCCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp GTCACACAGGGCCATAGCCAAGCCTTTTCACTAGAAGGGCAGGCAGTGCCCATTGTGGGTCCATTTTCTTaGCAGTGCAGCTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: VTQGHSQAFSLEGQAVPIVGPFS*QCSCVT
Trigger: GGTGACACAGCTGCACTGGCAAGAAAATGGACCCAC...AATGGGCACTGCCTGCCCTTCTAGTGAAAAGGCTTGGCTATGGCCCTGTGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CAACAGATGCAGCTGGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCGTGGGTCCATTTTCTTaGCAGTGCAGCTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: QQMQLATTVHSHREQGSFVGPFS*QCSCVT
Trigger: GGTGACACAGCTGCACTGGCAAGAAAATGGACCCAC...GAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCGGCTGGTCTGGAACCTaGCCAAACCTGCAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGGWSGT*PNLQAW
Trigger: CCAGGCCTGCAGGTTTGGGCAGGTTCCAGACCAGCC...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000444452.5
CDS-3UTR GCA 90 bp AAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCAGGAGAAACTGTTTCTaGAGGAAGGACAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: KEAGSMAWASDTAVLDGSRRNCF*RKDSSA
Trigger: GGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCT...GGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGACCCTTCCCCAGCAAATaGCAGGGGCTTCATGTGAAG +
Preference number: 4 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRPFPSK*QGLHVK
Trigger: CTTCACATGAAGCCCCTGGCATTTGCTGGGGAAGGG...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp CAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCACCAACATTTCTTCTCTGCTaGGGCTGCTCCCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: QGALDHDPSQVERPHPSPTFLLC*GCSLPL
Trigger: CAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGT...TGGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp CAGATGACGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATAGCCAATCAATCTCCCCTTCGTaGGCTTTGAACTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: QMTKARFLGPGVTQGHSQSISPS*ALNSRT
Trigger: GGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGA...TTGGCTATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp GTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGTGGCGCAGGCGCTTGTaGGGAATTTGCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VWPGLQIPLFWMDPQMTKWRRRL*GICTVK
Trigger: CTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCA...CTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp GAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGAACAGGGCAGTTTCATaGGACCCAAGGAGCTCTGGA +
Preference number: 4 (lower is better)
Translates to: EERRQGVWPGLQIPLFWMNRAVS*DPRSSG
Trigger: TCCAGAGCTCCTTGGGTCCCATGAAACTGCCCTGTT...CATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATCCTGGAAAGGCACTCTaGAGCAGCAGGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: RRKEAGSMAWASDTAVLDPGKAL*SSRMVT
Trigger: TGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGG...ATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp GGACCCGAATGGAGTGAGCAAAGGGAGTCCAGGCCTCCACTCTGCTCTAGAGATCAGATACCGCTGTTCTaGATGGATCCACAGATGACG +
Preference number: 4 (lower is better)
Translates to: GPEWSEQRESRPPLCSRDQIPLF*MDPQMT
Trigger: CGTCATCTGTGGATCCATCCAGAACAGCGGTATCTG...ATCTCTAGAGCAGAGTGGAGGCCTGGACTCCCTTTGCTCACTCCATTCGGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
CDS-3UTR CCA 90 bp AGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATACCGCTGTTCTaGATGGATCCACAGATGACG +
Preference number: 4 (lower is better)
Translates to: RRQGVWPGLQIPLFWMDPQIPLF*MDPQMT
Trigger: CGTCATCTGTGGATCCATCCAGAACAGCGGTATCTG...TGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCGCAGGGAGTATGGCCTaGGCTTCAGATACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: RNCFCRKDSSASRLLGIFAGSMA*ASDTAV
Trigger: AACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGC...GAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCGCAAATTCTCTACCCTaGGTTCTAGCCCCTCGTGCT +
Preference number: 4 (lower is better)
Translates to: RNCFCRKDSSASRLLGIFANSLP*VLAPRA
Trigger: AGCACGAGGGGCTAGAACTCAGGGTAGAGAATTTGC...GAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTGGCAACAGAGCCAGTaGCTGTGCCCAGGCCTAGGA +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGWQQSQ*LCPGLG
Trigger: TCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCA...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp GTAGAGGCACTGGAGAGAGAAAGCTATGTAGATGGCAACAGAGCCAGTGACTGTGGAACCGGCCTTCTCTaGCTTGTTGCCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VEALERESYVDGNRASDCGTGLL*LVALLL
Trigger: CAACAGCAGGGCAACAAGGCAGAGAAGGCCGGTTCC...ACAGTCACTGGCTCTGTTGCCATCTACATAGCTTTCTCTCTCCAGTGCCTCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR GCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCCTTTGTCGAGGCCCCTaGTCCTTGGAACCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGLCRGP*SLEPAF
Trigger: GAAGGCCGGTTCCAAGGAGCAGGGGCCTCGACAAAG...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGTCCACATTTCTTCTCTaGTGGGGCTGCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: VWPGLQIPLFWMDPQMTKSTFLL*WGCSLP
Trigger: AGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGA...CTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGACCACGGTTACCAACTTaGCATCAGGCCCTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRPRLPT*HQALKP
Trigger: TGGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGG...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGTAGCGGTAAGGTGTaGTGGAAAAGGTGGGTCCAT +
Preference number: 4 (lower is better)
Translates to: PFILSAATSAVDPNGVSKGSGKV*WKRWVH
Trigger: ATGGACCCACCTTTTCCAGCACACCTTACCGCTACC...TTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp AAGGACAAGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGACATTTCTTCTCTGCTaGGGCTGCTCCCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: KDKLNSGASGRQKKGGRETFLLC*GCSLPL
Trigger: CAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGT...CTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CAGATGACGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATAGCCAAAGCGGTAAGGTGTGCTaGAAAAGGTGGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: QMTKARFLGPGVTQGHSQSGKVC*KRWVHF
Trigger: AAAATGGACCCACCTTTTCCAGCACACCTTACCGCT...TTGGCTATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAGCTAAAGGAAACCTaGAAAGGCACTCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: CPFILSAATSAVDPNGVSKLKET*KGTLEQ
Trigger: CTGCTCCAGAGTGCCTTTCCAGGTTTCCTTTAGCTT...GCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGCAGATACCGCTGTTCTaGATGGATCCACAGATGACG +
Preference number: 4 (lower is better)
Translates to: FILSAATSAVDPNGVSKGQIPLF*MDPQMT
Trigger: CGTCATCTGTGGATCCATCCAGAACAGCGGTATCTG...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp CAACAGATGCAGCTGGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCCAGATACCGCTGTTCTaGATGGATCCACAGATGACG +
Preference number: 4 (lower is better)
Translates to: QQMQLATTVHSHREQGSFQIPLF*MDPQMT
Trigger: CGTCATCTGTGGATCCATCCAGAACAGCGGTATCTG...GAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp TTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTGCAGGGAGTATGGCCTaGGCTTCAGATACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: FLQEGQQCLQALGHLHMFAGSMA*ASDTAV
Trigger: AACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGC...AAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp TGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTTGCAGGGAGTATGGCCTaGGCTTCAGATACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: WASDTAVLDGSTDDEGKVAGSMA*ASDTAV
Trigger: AACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGC...AACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
3UTR CAA 72 bp CATCTGAACCCCCAGATTACTACCCAAGTCTTCCTTTaGCCCCTTCCTGCCCTAACAGCAAGTACCAGGCCA +
Preference number: 4 (lower is better)
Translates to: HLNPQITTQVFL*PLPALTASTRP
Trigger: TGGCCTGGTACTTGCTGTTAGGGCAGGAAGGGGCAAAAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp GTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACCCTTGTTGCCCTGCTGTTaGTGTGCCTGGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: VDYLGTYCIFRPAGLVLPLLPCC*CAWKRR
Trigger: CCTGCGCTTCCAGGCACATCAACAGCAGGGCAACAA...GGGTAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGATTAGTGCTACCCATCTaGACCCCCAGATTACTACCC +
Preference number: 4 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRLVLPI*TPRLLP
Trigger: GGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAA...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGATCCTGCCTAATGGGCTaGGGTTCATTTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRSCLMG*GSFSHS
Trigger: GGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGA...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp AGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTCTAGCTGCAGAAAGTaGACGCCATTCTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: SSTLEPLVGRRKEAGSMASSCRK*TPFFMP
Trigger: AGGCATAAAGAATGGCGTGCACTTTCTGCAGCTAGA...GGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000406567.7
CDS-3UTR GCA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACGATGTCACCAGCCAGTaGCAAGTTCATGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYDVTSQ*QVHGGP
Trigger: CGGGCCACCATGAACTTGGCACTGGCTGGTGACATC...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACCCGGAACCGGCCTTCTCTaGCTTGTTGCCCTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: VDYLGTYCIFRPAGLVLPGTGLL*LVALLL
Trigger: CAACAGCAGGGCAACAAGGCAGAGAAGGCCGGTTCC...GGGTAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTTCCACGGTTACCAACTTaGCATCAGGCCCTAAAGCCA +
Preference number: 4 (lower is better)
Translates to: WASDTAVLDGSTDDEGKVPRLPT*HQALKP
Trigger: TGGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGG...AACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACCGTGAGGGCAACAGATaGAGCTGGCAACGACTGTCC +
Preference number: 4 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYREGNR*SWQRLS
Trigger: GGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACG...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp AGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCATACCTAGGAACTTATTaGATCTTTAGGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RRQGVWPGLQIPLFWMDPYLGTY*IFRPAG
Trigger: GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTA...TGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp AGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGATACCTAGGAACTTATTaGATCTTTAGGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RQCPFILSAATSAVDPNGYLGTY*IFRPAG
Trigger: GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTA...TCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGCTGGCTTAGTGCTACCCATCTGAACCCCCAGATTACTACCCAAGTCTTCCTTCGTGTCTCTGTGTCATaGGAGTGCAGCAAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SWLSATHLNPQITTQVFLRVSVS*ECSKEA
Trigger: TGCCTCCTTGCTGCACTCCCATGACACAGAGACACG...AAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAAGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000406567.7
CDS-3UTR CCA 90 bp TGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTTGTGCCAAGTTCATGGTaGCCCGTGTCTCTGTGTCAT +
Preference number: 4 (lower is better)
Translates to: WASDTAVLDGSTDDEGKVVPSSW*PVSLCH
Trigger: ATGACACAGAGACACGGGCCACCATGAACTTGGCAC...AACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000406567.7
CDS-3UTR CCA 90 bp GATAAGGACAAGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGACATTTCTTCTCTGCTaGGGCTGCTCCCTTCCTTTG +
Preference number: 4 (lower is better)
Translates to: DKDKLNSGASGRQKKGGRTFLLC*GCSLPL
Trigger: CAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGT...CCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp GTCACACAGGGCCATAGCCAAGCCTTTTCACTAGAAGGGCAGGCAGTGCCCATTCATCTGTTCCTCCAGTaGCAAGCAGGGTATTATCGT +
Preference number: 4 (lower is better)
Translates to: VTQGHSQAFSLEGQAVPIHLFLQ*QAGYYR
Trigger: ACGATAATACCCTGCTTGCCACTGGAGGAACAGATG...AATGGGCACTGCCTGCCCTTCTAGTGAAAAGGCTTGGCTATGGCCCTGTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp GATAAGGACAAGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGTCAATCTCCCCTTCGTaGGCTTTGAACTCCAGAACC +
Preference number: 4 (lower is better)
Translates to: DKDKLNSGASGRQKKGGRSISPS*ALNSRT
Trigger: GGTTCTGGAGTTCAAAGCCCACGAAGGGGAGATTGA...CCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGAAGCTAAAGGAAACCTaGAAAGGCACTCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: FILSAATSAVDPNGVSKGKLKET*KGTLEQ
Trigger: CTGCTCCAGAGTGCCTTTCCAGGTTTCCTTTAGCTT...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp GTCACACAGGGCCATAGCCAAGCCTTTTCACTAGAAGGGCAGGCAGTGCCCATTAAGCTAAAGGAAACCTaGAAAGGCACTCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: VTQGHSQAFSLEGQAVPIKLKET*KGTLEQ
Trigger: CTGCTCCAGAGTGCCTTTCCAGGTTTCCTTTAGCTT...AATGGGCACTGCCTGCCCTTCTAGTGAAAAGGCTTGGCTATGGCCCTGTGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp TTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGGTGCTGGGGTCGACCTaGAGCGCGTACAACGGGAAC +
Preference number: 4 (lower is better)
Translates to: FPFLKVRVDYLGTYCIFRVLGST*SAYNGN
Trigger: GTTCCCGTTGTACGCGCTTCAGGTCGACCCCAGCAC...CCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCCTCACACCGGGGAGTTaGCAAAACCCTGACCATCAG +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGLTPGS*QNPDHQ
Trigger: CTGATGGTCAGGGTTTTGGCAACTCCCCGGTGTGAG...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp AGCTGGCTTAGTGCTACCCATCTGAACCCCCAGATTACTACCCAAGTCTTCCTTTCCACATTTCTTCTCTaGTGGGGCTGCTCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SWLSATHLNPQITTQVFLSTFLL*WGCSLP
Trigger: AGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGA...AAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAAGCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTTCTGTCTGCACCGCCTaGAAATTCTCTACCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FLQEGQQCLQALGHLHMFSVCTA*KFSTLS
Trigger: ACTCAGGGTAGAGAATTTGCAGGCGGTGCAGACAGA...AAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTTAGGAGAAACTGTTTCTaGAGGAAGGACAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: WASDTAVLDGSTDDEGKVRRNCF*RKDSSA
Trigger: GGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCT...AACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp TTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGGAGGCCCCTGCTCCTTaGAACCGGCCTTCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FPFLKVRVDYLGTYCIFREAPAP*NRPSLP
Trigger: AGGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTC...CCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAAGGAGCTCTAGCAGGGTATTATCGTaGTTGAAGCACACAACTTTC +
Preference number: 4 (lower is better)
Translates to: RLSTATENRAVSWDPRSSSRVLS*LKHTTF
Trigger: GAAAGTTGTGTGCTTCAACCACGATAATACCCTGCT...AGAGCTCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp AGGCCTGGTAGCGGTAAGGTGTGCTGGAAAAGGTGGGTCCATTTTCTTGCCAGTCATCTGTTCCTCCAGTaGCAAGCAGGGTATTATCGT +
Preference number: 4 (lower is better)
Translates to: RPGSGKVCWKRWVHFLASHLFLQ*QAGYYR
Trigger: ACGATAATACCCTGCTTGCCACTGGAGGAACAGATG...ACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CCA 90 bp GATAAGGACAAGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGAGCGGTAAGGTGTGCTaGAAAAGGTGGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: DKDKLNSGASGRQKKGGRSGKVC*KRWVHF
Trigger: AAAATGGACCCACCTTTTCCAGCACACCTTACCGCT...CCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTGGCGCAGGCGCTTGTaGGGAATTTGCACTGTGAAG +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGWRRRL*GICTVK
Trigger: CTTCACAGTGCAAATTCCCCACAAGCGCCTGCGCCA...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp GTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACCCCATGGCCACAGGACTTaGTCCGAAGGGGCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: VDYLGTYCIFRPAGLVLPHGHRT*SEGARS
Trigger: ACTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATG...GGGTAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCCCTGGAAAGGCACTCTaGAGCAGCAGGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGPGKAL*SSRMVT
Trigger: TGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGG...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp AGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGGTATTATCGTGGTTaGAGCACACAACTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: RRKEAGSMAWASDTAVLDGYYRG*STQLSA
Trigger: TGCAGAAAGTTGTGTGCTTCAACCACGATAATACCC...ATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp AGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTAAGCTGTGTCACCAGCTaGTCCTTCTGCCACACAGAG +
Preference number: 4 (lower is better)
Translates to: RVDYLGTYCIFRPAGLVLSCVTS*SFCHTE
Trigger: CTCTGTGTGGCAGAAGGATCAGCTGGTGACACAGCT...TAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACCCCCTTCTCTGCCTTGTTaGCCTGCTGTTGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: VDYLGTYCIFRPAGLVLPPSLPC*PAVDVP
Trigger: AGGCACATCAACAGCAGGGCAACAAGGCAGAGAAGG...GGGTAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCCCTTCTCTGCCTTGTTaGCCTGCTGTTGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGPSLPC*PAVDVP
Trigger: AGGCACATCAACAGCAGGGCAACAAGGCAGAGAAGG...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCGTGGGTCCATTTTCTTaGCAGTGCAGCTGTGTCACC +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGVGPFS*QCSCVT
Trigger: GGTGACACAGCTGCACTGGCAAGAAAATGGACCCAC...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp AGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTATCCAGGCCTCCACTCTaGTCTAGAGATGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RVDYLGTYCIFRPAGLVLSRPPL*SRDGSV
Trigger: GACACTGCCATCTCTAGAGCAGAGTGGAGGCCTGGA...TAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp GAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTTACCTAGGAACTTATTaGATCTTTAGGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: EKLFLQEGQQCLQALGHLYLGTY*IFRPAG
Trigger: GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTA...AAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGACACAACTTTCTGCAGTaGATCGGAGCTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRHNFLQ*IGAKVC
Trigger: ACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTG...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp GAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGAGCAGGGTATTATCGTaGTTGAAGCACACAACTTTC +
Preference number: 4 (lower is better)
Translates to: EERRQGVWPGLQIPLFWMSRVLS*LKHTTF
Trigger: GAAAGTTGTGTGCTTCAACCACGATAATACCCTGCT...CATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp AGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTAGCAGGGAGTATGGCCTaGGCTTCAGATACCGCTGTT +
Preference number: 4 (lower is better)
Translates to: RVDYLGTYCIFRPAGLVLAGSMA*ASDTAV
Trigger: AACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGC...TAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp TTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGTTGTTGCCCTGCTGTTaGTGTGCCTGGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: FPFLKVRVDYLGTYCIFRLLPCC*CAWKRR
Trigger: CCTGCGCTTCCAGGCACATCAACAGCAGGGCAACAA...CCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTTTCTAGCTGCAGAAAGTaGACGCCATTCTTTATGCCT +
Preference number: 4 (lower is better)
Translates to: WASDTAVLDGSTDDEGKVSSCRK*TPFFMP
Trigger: AGGCATAAAGAATGGCGTGCACTTTCTGCAGCTAGA...AACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000406567.7
CDS-3UTR GCA 90 bp TTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGGAACCTGCCCAAACCTaGAGGCCTGGTAGCGGTAAG +
Preference number: 4 (lower is better)
Translates to: FPFLKVRVDYLGTYCIFREPAQT*RPGSGK
Trigger: CTTACCGCTACCAGGCCTGCAGGTTTGGGCAGGTTC...CCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260643.7
ENST00000444452.5
CDS-3UTR GCA 90 bp GTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACCCAGGAGAAACTGTTTCTaGAGGAAGGACAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: VDYLGTYCIFRPAGLVLPRRNCF*RKDSSA
Trigger: GGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCT...GGGTAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp CTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTACCTTTTGCCCCTTCCTaGCCTAACAGCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: LFLPNGLRFIFPFLKVRVPFAPS*PNSKYQ
Trigger: CTGGTACTTGCTGTTAGGGCAGGAAGGGGCAAAAGG...TACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp CAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGCCTTTTGCCCCTTCCTaGCCTAACAGCAAGTACCAG +
Preference number: 4 (lower is better)
Translates to: QLFLPNGLRFIFPFLKVRPFAPS*PNSKYQ
Trigger: CTGGTACTTGCTGTTAGGGCAGGAAGGGGCAAAAGG...CCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AATGCCATGGGCCTCCCTCACGTAGTAGAGGCACTGGAGAGAGAAAGCTATGTACACAACTTTCTGCAGTaGATCGGAGCTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: NAMGLPHVVEALERESYVHNFLQ*IGAKVC
Trigger: ACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTG...TACATAGCTTTCTCTCTCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR TCA 90 bp AGCTGGCTTAGTGCTACCCATCTGAACCCCCAGATTACTACCCAAGTCTTCCTTGGGTATTATCGTGGTTaGAGCACACAACTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SWLSATHLNPQITTQVFLGYYRG*STQLSA
Trigger: TGCAGAAAGTTGTGTGCTTCAACCACGATAATACCC...AAGGAAGACTTGGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAAGCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCCTTCCCCAGCAAATaGCAGGGGCTTCATGTGAAG +
Preference number: 4 (lower is better)
Translates to: FPFLKVRVDYLGTYCIFRPFPSK*QGLHVK
Trigger: CTTCACATGAAGCCCCTGGCATTTGCTGGGGAAGGG...CCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACAGCGGTAAGGTGTGCTaGAAAAGGTGGGTCCATTTT +
Preference number: 4 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYSGKVC*KRWVHF
Trigger: AAAATGGACCCACCTTTTCCAGCACACCTTACCGCT...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TATCAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTACCTGGAAAGGCACTCTaGAGCAGCAGGATGGTCACA +
Preference number: 4 (lower is better)
Translates to: YQLFLPNGLRFIFPFLKVPGKAL*SSRMVT
Trigger: TGTGACCATCCTGCTGCTCCAGAGTGCCTTTCCAGG...TACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACAAGCTAAAGGAAACCTaGAAAGGCACTCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYKLKET*KGTLEQ
Trigger: CTGCTCCAGAGTGCCTTTCCAGGTTTCCTTTAGCTT...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp CTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACGGGTATTATCGTGGTTaGAGCACACAACTTTCTGCA +
Preference number: 4 (lower is better)
Translates to: LPNGLRFIFPFLKVRVDYGYYRG*STQLSA
Trigger: TGCAGAAAGTTGTGTGCTTCAACCACGATAATACCC...GTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TATCAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTACCTTCTCTGCCTTGTTaGCCTGCTGTTGATGTGCCT +
Preference number: 4 (lower is better)
Translates to: YQLFLPNGLRFIFPFLKVPSLPC*PAVDVP
Trigger: AGGCACATCAACAGCAGGGCAACAAGGCAGAGAAGG...TACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp CTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTACCTAGGAACTTATTaGATCTTTAGGCCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKVRVDYLGTYCIFRPAGYLGTY*IFRPAG
Trigger: GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTA...GCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CCA 90 bp AGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCCAGCTGGCTTAGTGCTACATCTGTTCCTCCAGTaGCAAGCAGGGTATTATCGT +
Preference number: 4 (lower is better)
Translates to: RVDYLGTYCIFRPAGLVLHLFLQ*QAGYYR
Trigger: ACGATAATACCCTGCTTGCCACTGGAGGAACAGATG...TAGCACTAAGCCAGCTGGCCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGAAGCTAAAGGAAACCTaGAAAGGCACTCTGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QLFLPNGLRFIFPFLKVRKLKET*KGTLEQ
Trigger: CTGCTCCAGAGTGCCTTTCCAGGTTTCCTTTAGCTT...CCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR TCA 90 bp TATCAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTATTAGTGCTACCCATCTaGACCCCCAGATTACTACCC +
Preference number: 4 (lower is better)
Translates to: YQLFLPNGLRFIFPFLKVLVLPI*TPRLLP
Trigger: GGGTAGTAATCTGGGGGTTCAGATGGGTAGCACTAA...TACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp CAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGAAGCACACAACTTTCTaGAGTGGATCGGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: QLFLPNGLRFIFPFLKVRKHTTF*SGSELK
Trigger: CTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTT...CCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp CAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGCACAACTTTCTGCAGTaGATCGGAGCTAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: QLFLPNGLRFIFPFLKVRHNFLQ*IGAKVC
Trigger: ACAGACTTTAGCTCCGATCCACTGCAGAAAGTTGTG...CCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR TCA 90 bp GTTCATTTTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATTCCTGCCTAATGGGCTaGGGTTCATTTTCCCATTCC +
Preference number: 4 (lower is better)
Translates to: VHFPIPQGKGRLPRNLLHSCLMG*GSFSHS
Trigger: GGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGA...ATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAAAATGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR GCA 90 bp TATCAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAGAGCTAAAGTCTGTCTaGACCGCCTGCAAATTCTCT +
Preference number: 4 (lower is better)
Translates to: YQLFLPNGLRFIFPFLKVELKSV*TACKFS
Trigger: AGAGAATTTGCAGGCGGTGCAGACAGACTTTAGCTC...TACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR GCA 90 bp TTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGAAGCACACAACTTTCTaGAGTGGATCGGAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: FPFLKVRVDYLGTYCIFRKHTTF*SGSELK
Trigger: CTTTAGCTCCGATCCACTGCAGAAAGTTGTGTGCTT...CCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CCA 90 bp TTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGAGCAGGGTATTATCGTaGTTGAAGCACACAACTTTC +
Preference number: 4 (lower is better)
Translates to: FPFLKVRVDYLGTYCIFRSRVLS*LKHTTF
Trigger: GAAAGTTGTGTGCTTCAACCACGATAATACCCTGCT...CCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS GCA 90 bp CCCGCCCGGCGCGCGTTCACTGCCCGCACCGCGGCACCCAGGACATaGCGCGCCGGGCCTTCGACTACTGCCCCGGCGGCTGGTGAACTC +
Preference number: 5 (lower is better)
Translates to: PARRAFTARTAAPRT*RAGPSTTAPAAGEL
Trigger: GAGTTCACCAGCCGCCGGGGCAGTAGTCGAAGGCCCGGCGCGGCATGTCCTGGGTGCCGCGGTGCGGGCAGTGAACGCGCGCCGGGCGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS CCA 90 bp GTCGACCTGAAGCGCGTACAACGGGAACGGAGCCCGGTACAGCTCTaGCGCCCGGCGCCGGCCCATCCCGCCCGGCGCGCGTTCACTGCC +
Preference number: 5 (lower is better)
Translates to: VDLKRVQRERSPVQL*RPAPAHPARRAFTA
Trigger: GGCAGTGAACGCGCGCCGGGCGGGATGGGCCGGCGCCGGGCGCCAGAGCTGTACCGGGCTCCGTTCCCGTTGTACGCGCTTCAGGTCGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS TCA 90 bp CCTCCTCCGCCCGCAGCGATGAGCAGCCCAGTGCTGGGGTCGACCTaGAGCGCGTACAACGGGAACGGAGCCCGGTACAGCTCTGGCGCC +
Preference number: 5 (lower is better)
Translates to: PPPPAAMSSPVLGST*SAYNGNGARYSSGA
Trigger: GGCGCCAGAGCTGTACCGGGCTCCGTTCCCGTTGTACGCGCTTCAGGTCGACCCCAGCACTGGGCTGCTCATCGCTGCGGGCGGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS GCA 90 bp CTGGAATCGCCGCCAGCCCGCAGCAAGACCCAGCCCCAGTGGCCCTaGGCTCTCACCACGCCATTCTTTATGCCTGTCTTGGCGGCGCCT +
Preference number: 5 (lower is better)
Translates to: LESPPARSKTQPQWP*ALTTPFFMPVLAAP
Trigger: AGGCGCCGCCAAGACAGGCATAAAGAATGGCGTGGTGAGAGCGCAGGGCCACTGGGGCTGGGTCTTGCTGCGGGCTGGCGGCGATTCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS TCA 90 bp CATTCTTTATGCCTGTCTTGGCGGCGCCTCCTCCGCCCGCAGCGATaGGCAGCCCAGTGCTGGGGTCGACCTGAAGCGCGTACAACGGGA +
Preference number: 5 (lower is better)
Translates to: HSLCLSWRRLLRPQR*AAQCWGRPEARTTG
Trigger: TCCCGTTGTACGCGCTTCAGGTCGACCCCAGCACTGGGCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS CCA 90 bp AAAGCCTCTCCTCCGCCCGCTGAGTTCTCGACTGAAATTCGCCCCTaGGCGTCAGGCAAGCGGGTCTTCCCAACAGAAGTGGGCAGGGCC +
Preference number: 5 (lower is better)
Translates to: KASPPPAEFSTEIRP*ASGKRVFPTEVGRA
Trigger: GGCCCTGCCCACTTCTGTTGGGAAGACCCGCTTGCCTGACGCCCAGGGGCGAATTTCAGTCGAGAACTCAGCGGGCGGAGGAGAGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS GCA 90 bp CCTTTCCCCAAGGGGGTAGAGAGGGAGCTCCTCACCGGCCTTCTCTaGCTTGTTGCCCTGCTGTTGATGTGCCTGGAAGCGCAGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PFPKGVERELLTGLL*LVALLLMCLEAQEL
Trigger: CAGCTCCTGCGCTTCCAGGCACATCAACAGCAGGGCAACAAGGCAGAGAAGGCCGGTGAGGAGCTCCCTCTCTACCCCCTTGGGGAAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS-3UTR CAA 90 bp AGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCCGAGGCCCCTGCTCCTaGGAACCGGCCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SSTLEPLVGRRKEAGSMARGPCS*EPAFSA
Trigger: GGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTCG...GGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp AGGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGACGAGGCCCCTGCTCCTaGGAACCGGCCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: RAVSWDPRSSGPRPFSGRRGPCS*EPAFSA
Trigger: GGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTCG...TCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CAA 90 bp CAGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGTTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: QAVPIHLVSGNLSCGPEWFFMPV*AAPPPP
Trigger: GGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAA...CCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp CAGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGGGCTGCTCCCTTCCTTaGTCGAGGCCCCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: QAVPIHLVSGNLSCGPEWGCSLP*SRPLLL
Trigger: AAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCC...CCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp CAGGCAGTGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGGGCTGGCGCAGGCGCTaGTGGGGAATTTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: QAVPIHLVSGNLSCGPEWGWRRR*WGICTV
Trigger: CACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCC...CCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp CACATCCGTCACCACAATGCCATGGGCCTCCCTCACGTAGTAGAGGCACTGGAGGGCTGGCGCAGGCGCTaGTGGGGAATTTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: HIRHHNAMGLPHVVEALEGWRRR*WGICTV
Trigger: CACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCC...CTCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS TCA 90 bp CAAGACCTCCCGGAAAAGGCCAGTATAAGACCCCTGGAGCTGCTCTaGGGCGGAGCTGAAGCGTTCCTGGCGACTCTGCAGCTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: QDLPEKASIRPLELL*GGAEAFLATLQLCA
Trigger: TGCACACAGCTGCAGAGTCGCCAGGAACGCTTCAGCTCCGCCTCAGAGCAGCTCCAGGGGTCTTATACTGGCCTTTTCCGGGAGGTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS GCA 90 bp CTGACAGTGGGCATCCTGCCCTGCAGCAAGGATGTCACCAGCCAGTaGCAAGTTCATGGTGGCCCGTGTCTCTGTGTCATGGGAGTGCAG +
Preference number: 5 (lower is better)
Translates to: LTVGILPCSKDVTSQ*QVHGGPCLCVMGVQ
Trigger: CTGCACTCCCATGACACAGAGACACGGGCCACCATGAACTTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATGCCCACTGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000468045.5
ENST00000474802.1
CDS CCA 90 bp CCTGCCCTGCAGCAAGGATGTCACCAGCCAGTGCCAAGTTCATGGTaGCCCGTGTCTCTGTGTCATGGGAGTGCAGCAAGGAGGCACTCA +
Preference number: 5 (lower is better)
Translates to: PALQQGCHQPVPSSW*PVSLCHGSAARRHS
Trigger: TGAGTGCCTCCTTGCTGCACTCCCATGACACAGAGACACGGGCCACCATGAACTTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000468045.5
ENST00000474802.1
CDS CCA 90 bp CATCCTGCCCTGCAGCAAGGATGTCACCAGCCAGTGCCAAGTTCATaGTGGCCCGTGTCTCTGTGTCATGGGAGTGCAGCAAGGAGGCAC +
Preference number: 5 (lower is better)
Translates to: HPALQQGCHQPVPSS*WPVSLCHGSAARRH
Trigger: GTGCCTCCTTGCTGCACTCCCATGACACAGAGACACGGGCCACCATGAACTTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000468045.5
ENST00000474802.1
CDS-3UTR CAA 90 bp GATAAGGACAAGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGCGAGGCCCCTGCTCCTaGGAACCGGCCTTCTCTGCC +
Preference number: 5 (lower is better)
Translates to: DKDKLNSGASGRQKKGGRRGPCS*EPAFSA
Trigger: GGCAGAGAAGGCCGGTTCCAAGGAGCAGGGGCCTCG...CCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp AGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGGGCTGGCGCAGGCGCTaGTGGGGAATTTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: RQGVWPGLQIPLFWMDPQGWRRR*WGICTV
Trigger: CACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCC...CTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp GGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGACGAAGGGGCAAGAAGTaGGAGCCATCCCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GASGRQKKGGREYGLGFRRRGKK*EPSQAV
Trigger: CACAGCCTGGGATGGCTCCAACTTCTTGCCCCTTCG...TCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS GCA 90 bp GACCACGACCCTTCTCAGGTAGAAAGGCCACATCCGTCACCACAATaGCATGGGCCTCCCTCACGTAGTAGAGGCACTGTGGGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: DHDPSQVERPHPSPQ*HGPPSRSRGTVGRR
Trigger: CCTTCTGCCCACAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGGCCTTTCTACCTGAGAAGGGTCGTGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS-3UTR CAA 90 bp AAGGACAAGCTCAACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGGGCTGCTCCCTTCCTTaGTCGAGGCCCCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: KDKLNSGASGRQKKGGREGCSLP*SRPLLL
Trigger: AAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCC...CTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTTGAGCTTGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp TTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGGGCTGGCGCAGGCGCTaGTGGGGAATTTGCACTGTG +
Preference number: 5 (lower is better)
Translates to: FILSAATSAVDPNGVSKGGWRRR*WGICTV
Trigger: CACAGTGCAAATTCCCCACAAGCGCCTGCGCCAGCC...CCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp GTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGCCCGAAGGGGCAAGAAGTaGGAGCCATCCCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: VSWDPRSSGPRPFSGRKARRGKK*EPSQAV
Trigger: CACAGCCTGGGATGGCTCCAACTTCTTGCCCCTTCG...GGCCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CAA 90 bp AAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCCGAAGGGGCAAGAAGTaGGAGCCATCCCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: KEAGSMAWASDTAVLDGSRRGKK*EPSQAV
Trigger: CACAGCCTGGGATGGCTCCAACTTCTTGCCCCTTCG...GGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS GCA 90 bp CTGACAGTGGGCATCCTGCCCTGCAGCAAGGATGTCACCAGCCAGTaGCAAGTTCATGGTGGCCCGTGTCTCACGCCATTCTTTATGCCT +
Preference number: 5 (lower is better)
Translates to: LTVGILPCSKDVTSQ*QVHGGPCLTPFFMP
Trigger: AGGCATAAAGAATGGCGTGAGACACGGGCCACCATGAACTTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATGCCCACTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CAA 90 bp GTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGTTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: VWPGLQIPLFWMDPQMTKFFMPV*AAPPPP
Trigger: GGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAA...CTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp GCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGCTTGTTGCCCTGCTGTaGATGTGCCTGGAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: AEERRQGVWPGLQIPLFWLVALL*MCLEAQ
Trigger: CTGCGCTTCCAGGCACATCAACAGCAGGGCAACAAG...CCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp GGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAAGGACCCACGGTTACCAACTaGCCATCAGGCCCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: GNDCPQPQRTGQFHGTQGPTVTN*PSGPKA
Trigger: GGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGGG...TCCTTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CAA 90 bp AACTCTGGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCGCGCTTGTGGGGAATTaGCACTGTGAAGAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: NSGASGRQKKGGREYGLGALVGN*HCEESQ
Trigger: CTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGC...GCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCCAGAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp GCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGTCATGGCCACAGGACTaGGTCCGAAGGGGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: AEERRQGVWPGLQIPLFWSWPQD*VRRGKK
Trigger: CTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATGA...CCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp TGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCTCATGGCCACAGGACTaGGTCCGAAGGGGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: CPFILSAATSAVDPNGVSSWPQD*VRRGKK
Trigger: CTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATGA...GCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS TCA 90 bp AGAGGCACTGGAGAGAGAAAGCTATGTAGATGGCAACAGAGCCAGTaGCTGTGCCCAGGCCTAGGAAGGTGCCGGATTCACTGCAGGCCT +
Preference number: 5 (lower is better)
Translates to: RGTGERKLCRWQQSQ*LCPGLGRCRIHCRP
Trigger: AGGCCTGCAGTGAATCCGGCACCTTCCTAGGCCTGGGCACAGTCACTGGCTCTGTTGCCATCTACATAGCTTTCTCTCTCCAGTGCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406567.7
CDS GCA 90 bp CCCTGGAGCTGCTCTGAGGCGGAGCTGAAGCGTTCCTGGCGACTCTaGAGCTGTGTGCAGTTTTCACTTTACCTTAAAAGCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PWSCSEAELKRSWRL*SCVQFSLYLKSLSS
Trigger: GGAGGAGAGGCTTTTAAGGTAAAGTGAAAACTGCACACAGCTGCAGAGTCGCCAGGAACGCTTCAGCTCCGCCTCAGAGCAGCTCCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS GCA 90 bp GAGTGCAGCAAGGAGGCACTCAAGCGCCCATTAATCAGCTCTAGCTaGAGAAAGTGCTGTGGGAGGGGGAACCCGGATGAGCAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: ECSKEALKRPLISSS*RKCCGRGNPDEQVQ
Trigger: CTGAACTTGCTCATCCGGGTTCCCCCTCCCACAGCACTTTCTGCAGCTAGAGCTGATTAATGGGCGCTTGAGTGCCTCCTTGCTGCACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS GCA 90 bp AGCTGGGCTATGCCTCTTTCAGCCACCACCCAAAGTCTTCACACCTaGAGGCCTGGTAGCGGTAAGGTGTGCTGGAAAAGGTGGGTCCAT +
Preference number: 5 (lower is better)
Translates to: SWAMPLSATTQSLHT*RPGSGKVCWKRWVH
Trigger: ATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTGTGAAGACTTTGGGTGGTGGCTGAAAGAGGCATAGCCCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474802.1
CDS CCA 90 bp TCACCAGCCAGTGCCAAGTTCATGGTGGCCCGTGTCTCTGTGTCATaGGAGTGCAGCAAGGAGGCACTCAAGCGCCCATTAATCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SPASAKFMVARVSVS*ECSKEALKRPLISS
Trigger: AGAGCTGATTAATGGGCGCTTGAGTGCCTCCTTGCTGCACTCCCATGACACAGAGACACGGGCCACCATGAACTTGGCACTGGCTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000468045.5
ENST00000474802.1
CDS CCA 90 bp GGAAGGTGCCGGATTCACTGCAGGCCTGGTAGCGGTAAGGTGTGCTaGAAAAGGTGGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCA +
Preference number: 5 (lower is better)
Translates to: GRCRIHCRPGSGKVC*KRWVHFLASAAVSP
Trigger: TGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGTGAATCCGGCACCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406567.7
CDS-3UTR CAA 90 bp TGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGGCAAGGTTTTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCC +
Preference number: 5 (lower is better)
Translates to: WASDTAVLDGSTDDEGKVFFMPV*AAPPPP
Trigger: GGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAA...AACCTTGCCTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp GCTGGCAACGACTGTCCACAGCCACAGAGAACAGGGCAGTTTCATGGGACCCAATCCCCTTCGTGGGCTTaGAACTCCAGAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: AGNDCPQPQRTGQFHGTQSPSWA*NSRTFS
Trigger: GGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGA...TTGGGTCCCATGAAACTGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CAA 90 bp GTCACACAGGGCCATAGCCAAGCCTTTTCACTAGAAGGGCAGGCAGTGCCCATTCCCACGGTTACCAACTaGCCATCAGGCCCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: VTQGHSQAFSLEGQAVPIPTVTN*PSGPKA
Trigger: GGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGGG...AATGGGCACTGCCTGCCCTTCTAGTGAAAAGGCTTGGCTATGGCCCTGTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp CAGATGACGAAGGCAAGGTTCCTGGGACCTGGAGTCACACAGGGCCATAGCCAAGCGCTTGTGGGGAATTaGCACTGTGAAGAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: QMTKARFLGPGVTQGHSQALVGN*HCEESQ
Trigger: CTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGC...TTGGCTATGGCCCTGTGTGACTCCAGGTCCCAGGAACCTTGCCTTCGTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp CCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAACGAAGGGGCAAGAAGTaGGAGCCATCCCAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: PFILSAATSAVDPNGVSKRRGKK*EPSQAV
Trigger: CACAGCCTGGGATGGCTCCAACTTCTTGCCCCTTCG...TTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp CAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGTCATGGCCACAGGACTaGGTCCGAAGGGGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: QFHGTQGALDHDPSQVERSWPQD*VRRGKK
Trigger: CTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATGA...CCTTTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CAA 90 bp GCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGCAGTGCCCATTCATCTaGTCAGCGGCAACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: AEERRQGVWPGLQIPLFWQCPFI*SAATSA
Trigger: AGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTG...CCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp GGAGCCTCTGGTAGGCAGAAGAAAGGAGGCAGGGAGTATGGCCTGGGCTTCAGAACCCAAGTCTTCCTTTaGCCCCTTCCTGCCCTAACA +
Preference number: 5 (lower is better)
Translates to: GASGRQKKGGREYGLGFRTQVFL*PLPALT
Trigger: TGTTAGGGCAGGAAGGGGCAAAAGGAAGACTTGGGT...TCTGAAGCCCAGGCCATACTCCCTGCCTCCTTTCTTCTGCCTACCAGAGGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp CACATCCGTCACCACAATGCCATGGGCCTCCCTCACGTAGTAGAGGCACTGGAGACCCAAGTCTTCCTTTaGCCCCTTCCTGCCCTAACA +
Preference number: 5 (lower is better)
Translates to: HIRHHNAMGLPHVVEALETQVFL*PLPALT
Trigger: TGTTAGGGCAGGAAGGGGCAAAAGGAAGACTTGGGT...CTCCAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS CCA 90 bp CGGATTCACTGCAGGCCTGGTAGCGGTAAGGTGTGCTGGAAAAGGTaGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCAGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: RIHCRPGSGKVCWKR*VHFLASAAVSPADP
Trigger: AGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGTGAATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406567.7
CDS CCA 90 bp CTTCACACCTGCAGGCCTGGTAGCGGTAAGGTGTGCTGGAAAAGGTaGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCAGCTGATCCT +
Preference number: 5 (lower is better)
Translates to: LHTCRPGSGKVCWKR*VHFLASAAVSPADP
Trigger: AGGATCAGCTGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTGTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474802.1
CDS-3UTR CAA 90 bp CCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAACTTGTTGCCCTGCTGTaGATGTGCCTGGAAGCGCAG +
Preference number: 5 (lower is better)
Translates to: PFILSAATSAVDPNGVSKLVALL*MCLEAQ
Trigger: CTGCGCTTCCAGGCACATCAACAGCAGGGCAACAAG...TTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp CCAGTGGCAAGCAGGGTATTATCGTGGTTGAAGCACACAACTTTCTGCAGTGGAGGCTGCTCCCTTCCTTaGTCGAGGCCCCTGCTCCTT +
Preference number: 5 (lower is better)
Translates to: PVASRVLSWLKHTTFCSGGCSLP*SRPLLL
Trigger: AAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCC...TCCACTGCAGAAAGTTGTGTGCTTCAACCACGATAATACCCTGCTTGCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS-3UTR CAA 90 bp CAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGTCCCCTTCGTGGGCTTaGAACTCCAGAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QGVWPGLQIPLFWMDPQMSPSWA*NSRTFS
Trigger: GGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGA...CATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp GCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACATGTTTCTAGACCCACGGTTACCAACTaGCCATCAGGCCCTAAAGCC +
Preference number: 5 (lower is better)
Translates to: AGRTAVPPGSWASSHVSRPTVTN*PSGPKA
Trigger: GGCTTTAGGGCCTGATGGCAAGTTGGTAACCGTGGG...TCTAGAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp ATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAAAGGGAGTCAGTGCCCATTCATCTaGTCAGCGGCAACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: ILSAATSAVDPNGVSKGSQCPFI*SAATSA
Trigger: AGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTG...ACTCCCTTTGCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp CAGGGAGTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGCAGTGCCCATTCATCTaGTCAGCGGCAACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: QGVWPGLQIPLFWMDPQMQCPFI*SAATSA
Trigger: AGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTG...CATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATACTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000430533.1
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp GGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGTGCCTCCAGGCTCTaGGGCATCTTCACATGTTTC +
Preference number: 5 (lower is better)
Translates to: GQFHGTQGALDHDPSQVESASRL*GIFTCF
Trigger: GAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACT...TTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS GCA 90 bp ACCACCCAAAGTCTTCACACCTGCAGGCCTGGTAGCGGTAAGGTGTaGTGGAAAAGGTGGGTCCATTTTCTTGCCAGTGCAGCTGTGTCA +
Preference number: 5 (lower is better)
Translates to: TTQSLHTCRPGSGKV*WKRWVHFLASAAVS
Trigger: TGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTGTGAAGACTTTGGGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474802.1
CDS CCA 90 bp ACCCAAAGTCTTCACACCTGCAGGCCTGGTAGCGGTAAGGTGTGCTaGAAAAGGTGGGTCCATTTTCTTGCCAGTGCAGCTGTGTCACCA +
Preference number: 5 (lower is better)
Translates to: TQSLHTCRPGSGKVC*KRWVHFLASAAVSP
Trigger: TGGTGACACAGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGGTGTGAAGACTTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474802.1
CDS-3UTR CAA 90 bp GAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCATCCCCTTCGTGGGCTTaGAACTCCAGAACCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ETVSAGRTAVPPGSWASSSPSWA*NSRTFS
Trigger: GGAGAAGGTTCTGGAGTTCAAAGCCCACGAAGGGGA...TGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp AGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCGCGCTTGTGGGGAATTaGCACTGTGAAGAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: RNCFCRKDSSASRLLGIFALVGN*HCEESQ
Trigger: CTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGC...GAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp AGTGTCCAGGCTCCTGATTCCCAGGAAGCAGGGAAGCTAAAGGAAACCTGGAAATCATGGCCACAGGACTaGGTCCGAAGGGGCAAGAAG +
Preference number: 5 (lower is better)
Translates to: SVQAPDSQEAGKLKETWKSWPQD*VRRGKK
Trigger: CTTCTTGCCCCTTCGGACCAAGTCCTGTGGCCATGA...TTTCCAGGTTTCCTTTAGCTTCCCTGCTTCCTGGGAATCAGGAGCCTGGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430533.1
ENST00000444452.5
CDS-3UTR CAA 90 bp GAGGAGAAACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATAGTGCCTCCAGGCTCTaGGGCATCTTCACATGTTTC +
Preference number: 5 (lower is better)
Translates to: EEKLFLQEGQQCLQALGHSASRL*GIFTCF
Trigger: GAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACT...ATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTTTCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS CCA 90 bp ACACAAACACTTGGCCAGGTTCCAGGCTTCTACAGTAAGGAGTACTaGCCCCTCTCTCCATGGCAGGTGCCCATACAACTTCTAGCTTGC +
Preference number: 5 (lower is better)
Translates to: TQTLGQVPGFYSKEY*PLSPWQVPIQLLAC
Trigger: GCAAGCTAGAAGTTGTATGGGCACCTGCCATGGAGAGAGGGGCCAGTACTCCTTACTGTAGAAGCCTGGAACCTGGCCAAGTGTTTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS-3UTR CAA 90 bp AACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACAAGTGCCTCCAGGCTCTaGGGCATCTTCACATGTTTC +
Preference number: 5 (lower is better)
Translates to: NCFCRKDSSASRLLGIFTSASRL*GIFTCF
Trigger: GAAACATGTGAAGATGCCCAAGAGCCTGGAGGCACT...TGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp GTATGGCCTGGGCTTCAGATACCGCTGTTCTGGATGGATCCACAGATGACGAAGACCCAAGTCTTCCTTTaGCCCCTTCCTGCCCTAACA +
Preference number: 5 (lower is better)
Translates to: VWPGLQIPLFWMDPQMTKTQVFL*PLPALT
Trigger: TGTTAGGGCAGGAAGGGGCAAAAGGAAGACTTGGGT...CTTCGTCATCTGTGGATCCATCCAGAACAGCGGTATCTGAAGCCCAGGCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS CCA 90 bp CAGGTTCCAGGCTTCTACAGTAAGGAGTACTGGCCCCTCTCTCCATaGCAGGTGCCCATACAACTTCTAGCTTGCTACCAAAACCCTACT +
Preference number: 5 (lower is better)
Translates to: QVPGFYSKEYWPLSP*QVPIQLLACYQNPT
Trigger: AGTAGGGTTTTGGTAGCAAGCTAGAAGTTGTATGGGCACCTGCCATGGAGAGAGGGGCCAGTACTCCTTACTGTAGAAGCCTGGAACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS-3UTR CAA 90 bp TGCCCATTCATCTTGTCAGCGGCAACCTCAGCTGTGGACCCGAATGGAGTGAGCAGGGTATTATCGTGGTaGAAGCACACAACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: CPFILSAATSAVDPNGVSRVLSW*KHTTFC
Trigger: GCAGAAAGTTGTGTGCTTCAACCACGATAATACCCT...GCTCACTCCATTCGGGTCCACAGCTGAGGTTGCCGCTGACAAGATGAATGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp GGGCAGTTTCATGGGACCCAAGGAGCTCTGGACCACGACCCTTCTCAGGTAGAAAGGGTATTATCGTGGTaGAAGCACACAACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: GQFHGTQGALDHDPSQVERVLSW*KHTTFC
Trigger: GCAGAAAGTTGTGTGCTTCAACCACGATAATACCCT...TTCTACCTGAGAAGGGTCGTGGTCCAGAGCTCCTTGGGTCCCATGAAACTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS GCA 90 bp TACTGGCCCCTCTCTCCATGGCAGGTGCCCATACAACTTCTAGCTTaGTACCAAAACCCTACTTCCAGACCCACTTCTTTAGAGACACCA +
Preference number: 5 (lower is better)
Translates to: YWPLSPWQVPIQLLA*YQNPTSRPTSLETP
Trigger: TGGTGTCTCTAAAGAAGTGGGTCTGGAAGTAGGGTTTTGGTAGCAAGCTAGAAGTTGTATGGGCACCTGCCATGGAGAGAGGGGCCAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS-3UTR CAA 90 bp AACTGTTTCTGCAGGAAGGACAGCAGTGCCTCCAGGCTCTTGGGCATCTTCACAAGGGTATTATCGTGGTaGAAGCACACAACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: NCFCRKDSSASRLLGIFTRVLSW*KHTTFC
Trigger: GCAGAAAGTTGTGTGCTTCAACCACGATAATACCCT...TGTGAAGATGCCCAAGAGCCTGGAGGCACTGCTGTCCTTCCTGCAGAAACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
CDS-3UTR CAA 90 bp CTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAAGGGTAACCCAAGTCTTCCTTTaGCCCCTTCCTGCCCTAACA +
Preference number: 5 (lower is better)
Translates to: LFLPNGLRFIFPFLKVRVTQVFL*PLPALT
Trigger: TGTTAGGGCAGGAAGGGGCAAAAGGAAGACTTGGGT...TACCCTTACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp TATCAACTTTTCCTGCCTAATGGGCTGAGGTTCATTTTCCCATTCCTCAAGGTAGCGCTTGTGGGGAATTaGCACTGTGAAGAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: YQLFLPNGLRFIFPFLKVALVGN*HCEESQ
Trigger: CTGCGACTCTTCACAGTGCAAATTCCCCACAAGCGC...TACCTTGAGGAATGGGAAAATGAACCTCAGCCCATTAGGCAGGAAAAGTTGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000444452.5
ENST00000456259.5
CDS-3UTR CAA 90 bp TTCCCATTCCTCAAGGTAAGGGTAGACTACCTAGGAACTTATTGCATCTTTAGGCAGTGCCCATTCATCTaGTCAGCGGCAACCTCAGCT +
Preference number: 5 (lower is better)
Translates to: FPFLKVRVDYLGTYCIFRQCPFI*SAATSA
Trigger: AGCTGAGGTTGCCGCTGACAAGATGAATGGGCACTG...CCTAAAGATGCAATAAGTTCCTAGGTAGTCTACCCTTACCTTGAGGAATGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000444452.5
ENST00000456259.5
CDS CCA 90 bp TTTTTCTCTCATTTGGGCCTCACAAATCTACACAGTGAGCAGGACTaGGATTATTACCTCTATTTTACAGAACAGGGTGAAGCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: FFSHLGLTNLHSEQD*DYYLYFTEQGEAQE
Trigger: CTCCTGAGCTTCACCCTGTTCTGTAAAATAGAGGTAATAATCCCAGTCCTGCTCACTGTGTAGATTTGTGAGGCCCAAATGAGAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS CCA 72 bp AAGCGCGTACAACGGGAACGGAGCCCGGTACAGCTCTaGCGCCCGGCGCCGGCCCATCCCGCCCGGCGCGCG +
Preference number: 6 (lower is better)
Translates to: KRVQRERSPVQL*RPAPAHPARRA
Trigger: CGCGCGCCGGGCGGGATGGGCCGGCGCCGGGCGCCAGAGCTGTACCGGGCTCCGTTCCCGTTGTACGCGCTT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS TCA 72 bp CCGCGCCGGGCCTTCGACTACTGCCCCGGCGGCTGGTaGACTCGGCCCCGTCGCCGCCGGGAGCACTCCCTA +
Preference number: 6 (lower is better)
Translates to: PRRAFDYCPGGW*TRPRRRREHSL
Trigger: TAGGGAGTGCTCCCGGCGGCGACGGGGCCGAGTTCACCAGCCGCCGGGGCAGTAGTCGAAGGCCCGGCGCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS GCA 72 bp CGCGCGTTCACTGCCCGCACCGCGGCACCCAGGACATaGCGCGCCGGGCCTTCGACTACTGCCCCGGCGGCT +
Preference number: 6 (lower is better)
Translates to: RAFTARTAAPRT*RAGPSTTAPAA
Trigger: AGCCGCCGGGGCAGTAGTCGAAGGCCCGGCGCGGCATGTCCTGGGTGCCGCGGTGCGGGCAGTGAACGCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS TCA 72 bp TGCCTGTCTTGGCGGCGCCTCCTCCGCCCGCAGCGATaGGCAGCCCAGTGCTGGGGTCGACCTGAAGCGCGT +
Preference number: 6 (lower is better)
Translates to: CLSWRRLLRPQR*AAQCWGRPEAR
Trigger: ACGCGCTTCAGGTCGACCCCAGCACTGGGCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGACAGGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS CAA 90 bp CCCCAGTGGCCCTGCGCTCTCACCACGCCATTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCCGCAGCGATGAGCAGCCCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: PQWPCALTTPFFMPV*AAPPPPAAMSSPVL
Trigger: CAGCACTGGGCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAATGGCGTGGTGAGAGCGCAGGGCCACTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS TCA 72 bp CCCGCAGCGATGAGCAGCCCAGTGCTGGGGTCGACCTaGAGCGCGTACAACGGGAACGGAGCCCGGTACAGC +
Preference number: 6 (lower is better)
Translates to: PAAMSSPVLGST*SAYNGNGARYS
Trigger: GCTGTACCGGGCTCCGTTCCCGTTGTACGCGCTTCAGGTCGACCCCAGCACTGGGCTGCTCATCGCTGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000416802.1
ENST00000444452.5
ENST00000468045.5
ENST00000474802.1
CDS CAA 72 bp GGTGGCCCGTGTCTCACGCCATTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCCGCAGCGATGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GGPCLTPFFMPV*AAPPPPAAMSS
Trigger: GCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAATGGCGTGAGACACGGGCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS CAA 90 bp TCGAGGCCCCTGCTCCTTGGAACCACGCCATTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCCGCAGCGATGAGCAGCCCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: SRPLLLGTTPFFMPV*AAPPPPAAMSSPVL
Trigger: CAGCACTGGGCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAATGGCGTGGTTCCAAGGAGCAGGGGCCTCGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416802.1
CDS CAA 72 bp CTGCTCCTTGGAACCACGCCATTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCCGCAGCGATGAGCAGC +
Preference number: 6 (lower is better)
Translates to: LLLGTTPFFMPV*AAPPPPAAMSS
Trigger: GCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAATGGCGTGGTTCCAAGGAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416802.1
CDS CAA 90 bp CAAGTTCATGGTGGCCCGTGTCTCACGCCATTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCCGCAGCGATGAGCAGCCCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: QVHGGPCLTPFFMPV*AAPPPPAAMSSPVL
Trigger: CAGCACTGGGCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAATGGCGTGAGACACGGGCCACCATGAACTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS CCA 72 bp CCTCCGCCCGCTGAGTTCTCGACTGAAATTCGCCCCTaGGCGTCAGGCAAGCGGGTCTTCCCAACAGAAGTG +
Preference number: 6 (lower is better)
Translates to: PPPAEFSTEIRP*ASGKRVFPTEV
Trigger: CACTTCTGTTGGGAAGACCCGCTTGCCTGACGCCCAGGGGCGAATTTCAGTCGAGAACTCAGCGGGCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS CAA 72 bp AGCTGCAGAAAGTGCACGCCATTCTTTATGCCTGTCTaGGCGGCGCCTCCTCCGCCCGCAGCGATGAGCAGC +
Preference number: 6 (lower is better)
Translates to: SCRKCTPFFMPV*AAPPPPAAMSS
Trigger: GCTGCTCATCGCTGCGGGCGGAGGAGGCGCCGCCAAGACAGGCATAAAGAATGGCGTGCACTTTCTGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000474802.1
CDS TCA 72 bp CCGGAAAAGGCCAGTATAAGACCCCTGGAGCTGCTCTaGGGCGGAGCTGAAGCGTTCCTGGCGACTCTGCAG +
Preference number: 6 (lower is better)
Translates to: PEKASIRPLELL*GGAEAFLATLQ
Trigger: CTGCAGAGTCGCCAGGAACGCTTCAGCTCCGCCTCAGAGCAGCTCCAGGGGTCTTATACTGGCCTTTTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS GCA 72 bp GGCATCCTGCCCTGCAGCAAGGATGTCACCAGCCAGTaGCAAGTTCATGGTGGCCCGTGTCTCACGCCATTC +
Preference number: 6 (lower is better)
Translates to: GILPCSKDVTSQ*QVHGGPCLTPF
Trigger: GAATGGCGTGAGACACGGGCCACCATGAACTTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000444452.5
CDS TCA 72 bp CAGTATAAGACCCCTGGAGCTGCTCTGAGGCGGAGCTaGAGCGTTCCTGGCGACTCTGCAGCTGTGTGCAGT +
Preference number: 6 (lower is better)
Translates to: QYKTPGAALRRS*SVPGDSAAVCS
Trigger: ACTGCACACAGCTGCAGAGTCGCCAGGAACGCTTCAGCTCCGCCTCAGAGCAGCTCCAGGGGTCTTATACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS GCA 72 bp GGCATCCTGCCCTGCAGCAAGGATGTCACCAGCCAGTaGCAAGTTCATGGTGGCCCGTGTCTCTGTGTCATG +
Preference number: 6 (lower is better)
Translates to: GILPCSKDVTSQ*QVHGGPCLCVM
Trigger: CATGACACAGAGACACGGGCCACCATGAACTTGGCACTGGCTGGTGACATCCTTGCTGCAGGGCAGGATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000468045.5
ENST00000474802.1
CDS GCA 72 bp GGAGCCACACAGGAACACTCCCGTGAGGGCAACAGATaGAGCTGGCAACGACTGTCCACAGCCACAGAGAAC +
Preference number: 6 (lower is better)
Translates to: GATQEHSREGNR*SWQRLSTATEN
Trigger: GTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGGAGTGTTCCTGTGTGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456259.5
CDS GCA 72 bp TCTGCTGGGGCTGCTCCCTTCCTTTGTCGAGGCCCCTaGTCCTTGGAACCTGTAACACAAACACTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: SAGAAPFLCRGP*SLEPVTQTLGQ
Trigger: CTGGCCAAGTGTTTGTGTTACAGGTTCCAAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCCAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS CCA 72 bp ACACAGGAACACTCCCGTGAGGGCAACAGATGCAGCTaGCAACGACTGTCCACAGCCACAGAGAACAGGGCA +
Preference number: 6 (lower is better)
Translates to: TQEHSREGNRCS*QRLSTATENRA
Trigger: TGCCCTGTTCTCTGTGGCTGTGGACAGTCGTTGCCAGCTGCATCTGTTGCCCTCACGGGAGTGTTCCTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000456259.5
CDS CCA 72 bp CCCTGGAGCTGCTCTGAGGCGGAGCTGAAGCGTTCCTaGCGACTCTGCAGCTGTGTGCAGTTTTCACTTTAC +
Preference number: 6 (lower is better)
Translates to: PWSCSEAELKRS*RLCSCVQFSLY
Trigger: GTAAAGTGAAAACTGCACACAGCTGCAGAGTCGCCAGGAACGCTTCAGCTCCGCCTCAGAGCAGCTCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS CAA 72 bp GGGGCTGCTCCCTTCCTTTGTCGAGGCCCCTGCTCCTaGGAACCTGTAACACAAACACTTGGCCAGGTTCCA +
Preference number: 6 (lower is better)
Translates to: GAAPFLCRGPCS*EPVTQTLGQVP
Trigger: TGGAACCTGGCCAAGTGTTTGTGTTACAGGTTCCAAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS CAA 90 bp GGTTTCCGCTCCACATTTCTTCTCTGCTGGGGCTGCTCCCTTCCTTaGTCGAGGCCCCTGCTCCTTGGAACCACGCCATTCTTTATGCCT +
Preference number: 6 (lower is better)
Translates to: GFRSTFLLCWGCSLP*SRPLLLGTTPFFMP
Trigger: AGGCATAAAGAATGGCGTGGTTCCAAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000416802.1
CDS CAA 90 bp TTCTCTGCTGGGGCTGCTCCCTTCCTTTGTCGAGGCCCCTGCTCCTaGGAACCTGTAACACAAACACTTGGCCAGGTTCCAGGCTTCTAC +
Preference number: 6 (lower is better)
Translates to: FSAGAAPFLCRGPCS*EPVTQTLGQVPGFY
Trigger: GTAGAAGCCTGGAACCTGGCCAAGTGTTTGTGTTACAGGTTCCAAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS GCA 72 bp AAGGAGGCACTCAAGCGCCCATTAATCAGCTCTAGCTaGAGAAAGTGCTGTGGGAGGGGGAACCCGGATGAG +
Preference number: 6 (lower is better)
Translates to: KEALKRPLISSS*RKCCGRGNPDE
Trigger: CTCATCCGGGTTCCCCCTCCCACAGCACTTTCTGCAGCTAGAGCTGATTAATGGGCGCTTGAGTGCCTCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS GCA 72 bp CCTTCTCAGGTAGAAAGGCCACATCCGTCACCACAATaGCATGGGCCTCCCTCACGTAGTAGAGGCACTGTG +
Preference number: 6 (lower is better)
Translates to: PSQVERPHPSPQ*HGPPSRSRGTV
Trigger: CACAGTGCCTCTACTACGTGAGGGAGGCCCATGGCATTGTGGTGACGGATGTGGCCTTTCTACCTGAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468045.5
CDS CCA 72 bp AGTGCCAAGTTCATGGTGGCCCGTGTCTCTGTGTCATaGGAGTGCAGCAAGGAGGCACTCAAGCGCCCATTA +
Preference number: 6 (lower is better)
Translates to: SAKFMVARVSVS*ECSKEALKRPL
Trigger: TAATGGGCGCTTGAGTGCCTCCTTGCTGCACTCCCATGACACAGAGACACGGGCCACCATGAACTTGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260643.7
ENST00000406567.7
ENST00000468045.5
ENST00000474802.1
CDS CAA 90 bp GGTTTCCGCTCCACATTTCTTCTCTGCTGGGGCTGCTCCCTTCCTTaGTCGAGGCCCCTGCTCCTTGGAACCTGTAACACAAACACTTGG +
Preference number: 6 (lower is better)
Translates to: GFRSTFLLCWGCSLP*SRPLLLGTCNTNTW
Trigger: CCAAGTGTTTGTGTTACAGGTTCCAAGGAGCAGGGGCCTCGACAAAGGAAGGGAGCAGCCCCAGCAGAGAAGAAATGTGGAGCGGAAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS GCA 72 bp TGCCGGATTCACTGCAGGCCTGGTAGCGGTAAGGTGTaGTGGAAAAGGTGGGTCCATTTTCTTGCCAGTGCA +
Preference number: 6 (lower is better)
Translates to: CRIHCRPGSGKV*WKRWVHFLASA
Trigger: TGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGTGAATCCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406567.7
CDS CCA 72 bp CGGATTCACTGCAGGCCTGGTAGCGGTAAGGTGTGCTaGAAAAGGTGGGTCCATTTTCTTGCCAGTGCAGCT +
Preference number: 6 (lower is better)
Translates to: RIHCRPGSGKVC*KRWVHFLASAA
Trigger: AGCTGCACTGGCAAGAAAATGGACCCACCTTTTCCAGCACACCTTACCGCTACCAGGCCTGCAGTGAATCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406567.7
CDS CCA 72 bp CTTGGCCAGGTTCCAGGCTTCTACAGTAAGGAGTACTaGCCCCTCTCTCCATGGCAGGTGCCCATACAACTT +
Preference number: 6 (lower is better)
Translates to: LGQVPGFYSKEY*PLSPWQVPIQL
Trigger: AAGTTGTATGGGCACCTGCCATGGAGAGAGGGGCCAGTACTCCTTACTGTAGAAGCCTGGAACCTGGCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS CCA 72 bp GGCTTCTACAGTAAGGAGTACTGGCCCCTCTCTCCATaGCAGGTGCCCATACAACTTCTAGCTTGCTACCAA +
Preference number: 6 (lower is better)
Translates to: GFYSKEYWPLSP*QVPIQLLACYQ
Trigger: TTGGTAGCAAGCTAGAAGTTGTATGGGCACCTGCCATGGAGAGAGGGGCCAGTACTCCTTACTGTAGAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS CAA 90 bp GTACTGGCCCCTCTCTCCATGGCAGGTGCCCATACAACTTCTAGCTaGCTACCAAAACCCTACTTCCAGACCCACTTCTTTAGAGACACC +
Preference number: 6 (lower is better)
Translates to: VLAPLSMAGAHTTSS*LPKPYFQTHFFRDT
Trigger: GGTGTCTCTAAAGAAGTGGGTCTGGAAGTAGGGTTTTGGTAGCAAGCTAGAAGTTGTATGGGCACCTGCCATGGAGAGAGGGGCCAGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS CAA 72 bp CCTCTCTCCATGGCAGGTGCCCATACAACTTCTAGCTaGCTACCAAAACCCTACTTCCAGACCCACTTCTTT +
Preference number: 6 (lower is better)
Translates to: PLSMAGAHTTSS*LPKPYFQTHFF
Trigger: AAAGAAGTGGGTCTGGAAGTAGGGTTTTGGTAGCAAGCTAGAAGTTGTATGGGCACCTGCCATGGAGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS GCA 72 bp CTCTCTCCATGGCAGGTGCCCATACAACTTCTAGCTTaGTACCAAAACCCTACTTCCAGACCCACTTCTTTA +
Preference number: 6 (lower is better)
Translates to: LSPWQVPIQLLA*YQNPTSRPTSL
Trigger: TAAAGAAGTGGGTCTGGAAGTAGGGTTTTGGTAGCAAGCTAGAAGTTGTATGGGCACCTGCCATGGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000468045.5
ENST00000474802.1
CDS CCA 72 bp CATTTGGGCCTCACAAATCTACACAGTGAGCAGGACTaGGATTATTACCTCTATTTTACAGAACAGGGTGAA +
Preference number: 6 (lower is better)
Translates to: HLGLTNLHSEQD*DYYLYFTEQGE
Trigger: TTCACCCTGTTCTGTAAAATAGAGGTAATAATCCCAGTCCTGCTCACTGTGTAGATTTGTGAGGCCCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468045.5