Pregenerated sensors for PRDX5 (Homo sapiens)
Ensembl gene IDs: ENSG00000126432Ensembl transcript IDs: ENST00000265462.9, ENST00000347941.4, ENST00000352435.8
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCCATACCCGCCCCACGGCCACTTCCACTCCGCCTCCTGGCTGGTaGCACCGCAGCAGGCGGGGCACCGCTAGCGGCACAGCGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: SHTRPTATSTPPPGW*HRSRRGTASGTAAT Trigger: TGTCGCCGCTGTGCCGCTAGCGGTGCCCCGCCTGCTGCGGTGGCACCAGCCAGGAGGCGGAGTGGAAGTGGCCGTGGGGCGGGTATGGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265462.9 |
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| CDS GCA 90 bp | CCCGCCAGACGCCCACTCTCCTTCACTGTACCGTCTTGCTGCCGCTaGCGCAGACTGACCGCCGGCCCCACCGACGAGTATATAGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: PARRPLSFTVPSCCR*RRLTAGPTDEYIAR Trigger: GCGGGCTATATACTCGTCGGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTCTGGCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000265462.9 ENST00000347941.4 ENST00000352435.8 |
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| CDS GCA 90 bp | ACTGCGGACCCCGCCAGACGCCCACTCTCCTTCACTGTACCGTCTTaGTGCCGCTGCCGCAGACTGACCGCCGGCCCCACCGACGAGTAT | + |
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Preference number: 5 (lower is better) Translates to: TADPARRPLSFTVPS*CRCRRLTAGPTDEY Trigger: ATACTCGTCGGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTCTGGCGGGGTCCGCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000265462.9 ENST00000347941.4 ENST00000352435.8 |
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| CDS GCA 90 bp | GCGGACCCCGCCAGACGCCCACTCTCCTTCACTGTACCGTCTTGCTaGCGCTGCCGCAGACTGACCGCCGGCCCCACCGACGAGTATATA | + |
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Preference number: 5 (lower is better) Translates to: ADPARRPLSFTVPSC*RCRRLTAGPTDEYI Trigger: TATATACTCGTCGGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTCTGGCGGGGTCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000265462.9 ENST00000347941.4 ENST00000352435.8 |
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| CDS CCA 72 bp | ACCCGCCCCACGGCCACTTCCACTCCGCCTCCTGGCTaGTGCCACCGCAGCAGGCGGGGCACCGCTAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: TRPTATSTPPPG*CHRSRRGTASG Trigger: GCCGCTAGCGGTGCCCCGCCTGCTGCGGTGGCACCAGCCAGGAGGCGGAGTGGAAGTGGCCGTGGGGCGGGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265462.9 |
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| CDS GCA 72 bp | CGCCCCACGGCCACTTCCACTCCGCCTCCTGGCTGGTaGCACCGCAGCAGGCGGGGCACCGCTAGCGGCACA | + |
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Preference number: 6 (lower is better) Translates to: RPTATSTPPPGW*HRSRRGTASGT Trigger: TGTGCCGCTAGCGGTGCCCCGCCTGCTGCGGTGGCACCAGCCAGGAGGCGGAGTGGAAGTGGCCGTGGGGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000265462.9 |
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| CDS GCA 72 bp | CCCGCCAGACGCCCACTCTCCTTCACTGTACCGTCTTaGTGCCGCTGCCGCAGACTGACCGCCGGCCCCACC | + |
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Preference number: 6 (lower is better) Translates to: PARRPLSFTVPS*CRCRRLTAGPT Trigger: GGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTCTGGCGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000265462.9 ENST00000347941.4 ENST00000352435.8 |
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| CDS GCA 72 bp | GCCAGACGCCCACTCTCCTTCACTGTACCGTCTTGCTaGCGCTGCCGCAGACTGACCGCCGGCCCCACCGAC | + |
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Preference number: 6 (lower is better) Translates to: ARRPLSFTVPSC*RCRRLTAGPTD Trigger: GTCGGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTCTGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000265462.9 ENST00000347941.4 ENST00000352435.8 |
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| CDS CAA 90 bp | AACTGCGGACCCCGCCAGACGCCCACTCTCCTTCACTGTACCGTCTaGCTGCCGCTGCCGCAGACTGACCGCCGGCCCCACCGACGAGTA | + |
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Preference number: 6 (lower is better) Translates to: NCGPRQTPTLLHCTV*LPLPQTDRRPHRRV Trigger: TACTCGTCGGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCGTCTGGCGGGGTCCGCAGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000265462.9 ENST00000347941.4 ENST00000352435.8 |
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| CDS GCA 72 bp | CGCCCACTCTCCTTCACTGTACCGTCTTGCTGCCGCTaGCGCAGACTGACCGCCGGCCCCACCGACGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: RPLSFTVPSCCR*RRLTAGPTDEY Trigger: ATACTCGTCGGTGGGGCCGGCGGTCAGTCTGCGGCAGCGGCAGCAAGACGGTACAGTGAAGGAGAGTGGGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000265462.9 ENST00000347941.4 ENST00000352435.8 |
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