Pregenerated sensors for PRDX3 (Homo sapiens)
Ensembl gene IDs: ENSG00000165672Ensembl transcript IDs: ENST00000494433.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGATGCTTTAACAAAGGCAGTACTGGACCAGGTCACCATAAAACATaGAGTATGGTCACACTTACAAGTTCACATAGTGCCCTGAATGTT | + |
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Preference number: 5 (lower is better) Translates to: RCFNKGSTGPGHHKT*SMVTLTSSHSALNV Trigger: AACATTCAGGGCACTATGTGAACTTGTAAGTGTGACCATACTGCATGTTTTATGGTGACCTGGTCCAGTACTGCCTTTGTTAAAGCATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494433.1 |
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| CDS TCA 90 bp | GAACTAGAGAGAGCAAAGACTATTAGTGACTTGGCAAGCATTCTTTaGGCTGCTGTATCACATCTTGGCAAGAAACTTATAGGCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: ELERAKTISDLASIL*AAVSHLGKKLIGKW Trigger: CCATTTGCCTATAAGTTTCTTGCCAAGATGTGATACAGCAGCTCAAAGAATGCTTGCCAAGTCACTAATAGTCTTTGCTCTCTCTAGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494433.1 |
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| CDS TCA 72 bp | ATTGCCCACGCTGGAGTGCAGTGCTCTTCTCAGGTGTaGTCACAGCAGGCTGCAGCCTCGAACTTCTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: IAHAGVQCSSQV*SQQAAASNFWL Trigger: GAGCCAGAAGTTCGAGGCTGCAGCCTGCTGTGATCACACCTGAGAAGAGCACTGCACTCCAGCGTGGGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494433.1 |
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| CDS GCA 72 bp | AGTGCAGTGCTCTTCTCAGGTGTGATCACAGCAGGCTaGAGCCTCGAACTTCTGGCTCAACTGATCCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SAVLFSGVITAG*SLELLAQLILP Trigger: TGGGAGGATCAGTTGAGCCAGAAGTTCGAGGCTGCAGCCTGCTGTGATCACACCTGAGAAGAGCACTGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000494433.1 |
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| CDS GCA 72 bp | AACAAAGGCAGTACTGGACCAGGTCACCATAAAACATaGAGTATGGTCACACTTACAAGTTCACATAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: NKGSTGPGHHKT*SMVTLTSSHSA Trigger: GGCACTATGTGAACTTGTAAGTGTGACCATACTGCATGTTTTATGGTGACCTGGTCCAGTACTGCCTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000494433.1 |
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