Pregenerated sensors for PRDX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000167815Ensembl transcript IDs: ENST00000466174.5, ENST00000477555.1, ENST00000478908.1, ENST00000498785.1
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGCACAGCAGGGTCCTCACCCTGTGGGCCCAATGTGATAAGCACTaGAGGCCGGAGATAAGGGGCTTTAGAGTAGGCCGCTGGGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: WHSRVLTLWAQCDKH*RPEIRGFRVGRWEP Trigger: AGGCTCCCAGCGGCCTACTCTAAAGCCCCTTATCTCCGGCCTCCAGTGCTTATCACATTGGGCCCACAGGGTGAGGACCCTGCTGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000466174.5 ENST00000478908.1 |
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| CDS TCA 90 bp | GTTCCAGAGGTTGAGCAATGGCCACGAAGCCACACTGCTAGGACCTaGGGGTGTGAGCTTAGCTGCAACCTCCCTCTTTGGCCCCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: VPEVEQWPRSHTART*GCELSCNLPLWPLL Trigger: GAGCAGGGGCCAAAGAGGGAGGTTGCAGCTAAGCTCACACCCTCAGGTCCTAGCAGTGTGGCTTCGTGGCCATTGCTCAACCTCTGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS CCA 90 bp | CAGAGAGCCTGTGTTAAGAGTCCCCATCCTCCTCTAGCTGTGTCATaGGGTACAGCCCTTCACTTCGGTGAACTGGAGTTTCCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QRACVKSPHPPLAVS*GTALHFGELEFPSS Trigger: TGAAGATGGAAACTCCAGTTCACCGAAGTGAAGGGCTGTACCCCATGACACAGCTAGAGGAGGATGGGGACTCTTAACACAGGCTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS CCA 72 bp | GGAGTAGGGGAGACAGAGTTGGGGCCTCAGGATGCCTaGCACAGCAGGGTCCTCACCCTGTGGGCCCAATGT | + |
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Preference number: 6 (lower is better) Translates to: GVGETELGPQDA*HSRVLTLWAQC Trigger: ACATTGGGCCCACAGGGTGAGGACCCTGCTGTGCCAGGCATCCTGAGGCCCCAACTCTGTCTCCCCTACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000466174.5 ENST00000478908.1 |
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| CDS CAA 90 bp | GGCTTTAGAGTAGGCCGCTGGGAGCCTCACCCACCCCACCCTGGGTaGGGTGCAAGGACTGTATCCCCATGGCTGGGAAGACTGAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: GFRVGRWEPHPPHPG*GARTVSPWLGRLSL Trigger: CAAACTCAGTCTTCCCAGCCATGGGGATACAGTCCTTGCACCCAACCCAGGGTGGGGTGGGTGAGGCTCCCAGCGGCCTACTCTAAAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS CAA 72 bp | CCGCTGCTAGCCACAGGGCTGGGGGCAGAGAAGACATaGTACAGGAGTGGTCCCAGCATCACAGGAATGGGG | + |
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Preference number: 6 (lower is better) Translates to: PLLATGLGAEKT*YRSGPSITGMG Trigger: CCCCATTCCTGTGATGCTGGGACCACTCCTGTACAATGTCTTCTCTGCCCCCAGCCCTGTGGCTAGCAGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000466174.5 ENST00000477555.1 |
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| CDS TCA 72 bp | CTGCCACAGCTTCCCAAAGTGCTGGCAATACAACCGTaGGCCACTGAGCCCGGCCCCTTTGTCCACCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LPQLPKVLAIQP*ATEPGPFVHLG Trigger: ACCAAGGTGGACAAAGGGGCCGGGCTCAGTGGCTCACGGTTGTATTGCCAGCACTTTGGGAAGCTGTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498785.1 |
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| CDS CCA 72 bp | CCCCACCCTGGGTTGGGTGCAAGGACTGTATCCCCATaGCTGGGAAGACTGAGTTTGAGAGGCACAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PHPGLGARTVSP*LGRLSLRGTAP Trigger: TGGAGCTGTGCCTCTCAAACTCAGTCTTCCCAGCCATGGGGATACAGTCCTTGCACCCAACCCAGGGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS CCA 72 bp | AGGGTCCTCACCCTGTGGGCCCAATGTGATAAGCACTaGAGGCCGGAGATAAGGGGCTTTAGAGTAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RVLTLWAQCDKH*RPEIRGFRVGR Trigger: GCGGCCTACTCTAAAGCCCCTTATCTCCGGCCTCCAGTGCTTATCACATTGGGCCCACAGGGTGAGGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000466174.5 ENST00000478908.1 |
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| CDS CAA 72 bp | GCAAGGACTGTATCCCCATGGCTGGGAAGACTGAGTTaGAGAGGCACAGCTCCAGCTAAGTGGCTTCACATG | + |
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Preference number: 6 (lower is better) Translates to: ARTVSPWLGRLS*RGTAPAKWLHM Trigger: CATGTGAAGCCACTTAGCTGGAGCTGTGCCTCTCAAACTCAGTCTTCCCAGCCATGGGGATACAGTCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS TCA 72 bp | GCCCTTCACTTCGGTGAACTGGAGTTTCCATCTTCATaGAATAGGGCAGCACAGCCTCCCTCCTGGGAACTA | + |
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Preference number: 6 (lower is better) Translates to: ALHFGELEFPSS*NRAAQPPSWEL Trigger: TAGTTCCCAGGAGGGAGGCTGTGCTGCCCTATTTCATGAAGATGGAAACTCCAGTTCACCGAAGTGAAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS GCA 72 bp | CCATCTGGACAGGTAAGAGGACAGGCAGTGAATGTTTaGATGAGTGACGGAGGCGCTCAGTATGTACCCATG | + |
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Preference number: 6 (lower is better) Translates to: PSGQVRGQAVNV*MSDGGAQYVPM Trigger: CATGGGTACATACTGAGCGCCTCCGTCACTCATGCAAACATTCACTGCCTGTCCTCTTACCTGTCCAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498785.1 |
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| CDS CAA 90 bp | AATGTTTCCATTATTTTCACGATGGGGAAACGCAGGTTCCAGAGGTaGAGCAATGGCCACGAAGCCACACTGCTAGGACCTGAGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: NVSIIFTMGKRRFQR*SNGHEATLLGPEGV Trigger: CACACCCTCAGGTCCTAGCAGTGTGGCTTCGTGGCCATTGCTCAACCTCTGGAACCTGCGTTTCCCCATCGTGAAAATAATGGAAACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS CCA 72 bp | TGTGTTAAGAGTCCCCATCCTCCTCTAGCTGTGTCATaGGGTACAGCCCTTCACTTCGGTGAACTGGAGTTT | + |
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Preference number: 6 (lower is better) Translates to: CVKSPHPPLAVS*GTALHFGELEF Trigger: AAACTCCAGTTCACCGAAGTGAAGGGCTGTACCCCATGACACAGCTAGAGGAGGATGGGGACTCTTAACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS TCA 72 bp | ACAGGTAAGAGGACAGGCAGTGAATGTTTGCATGAGTaGCGGAGGCGCTCAGTATGTACCCATGTGTCATGT | + |
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Preference number: 6 (lower is better) Translates to: TGKRTGSECLHE*RRRSVCTHVSC Trigger: ACATGACACATGGGTACATACTGAGCGCCTCCGTCACTCATGCAAACATTCACTGCCTGTCCTCTTACCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000498785.1 |
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| CDS GCA 72 bp | AGGCGTTATTTGTCTCCTACCACATTAGAAACATCCTaGAGACAAAGCCCTGAGCTGAATCTTCTTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RRYLSPTTLETS*RQSPELNLLWG Trigger: GCCCCAAAGAAGATTCAGCTCAGGGCTTTGTCTGCAGGATGTTTCTAATGTGGTAGGAGACAAATAACGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498785.1 |
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| CDS CAA 72 bp | CCCCTTTGTCCACCTTGGTTGAATGTCAGGCGTTATTaGTCTCCTACCACATTAGAAACATCCTGCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: PLCPPWLNVRRY*SPTTLETSCRQ Trigger: TTGTCTGCAGGATGTTTCTAATGTGGTAGGAGACAAATAACGCCTGACATTCAACCAAGGTGGACAAAGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000498785.1 |
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| CDS CAA 90 bp | GCAACTAGTTGTCAAATGCTAATTACTGTCATCATCCTTAAAGACTaGGGCGGCAATGTTTCCATTATTTTCACGATGGGGAAACGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATSCQMLITVIILKD*GGNVSIIFTMGKRR Trigger: CCTGCGTTTCCCCATCGTGAAAATAATGGAAACATTGCCGCCCAAGTCTTTAAGGATGATGACAGTAATTAGCATTTGACAACTAGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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| CDS CAA 72 bp | TGTCAAATGCTAATTACTGTCATCATCCTTAAAGACTaGGGCGGCAATGTTTCCATTATTTTCACGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: CQMLITVIILKD*GGNVSIIFTMG Trigger: CCCCATCGTGAAAATAATGGAAACATTGCCGCCCAAGTCTTTAAGGATGATGACAGTAATTAGCATTTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466174.5 |
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