RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDM8 (Homo sapiens)

Ensembl gene IDs: ENSG00000152784

Ensembl transcript IDs: ENST00000339711.8, ENST00000415738.3, ENST00000504452.5, ENST00000506547.5, ENST00000507025.1, ENST00000508061.6, ENST00000508965.5, ENST00000509375.5, ENST00000511825.5, ENST00000515013.5

Found 538 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTaGAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGT +
Preference number: 1 (lower is better)
Translates to: FRGARKRWMFSRVYS*RWLNCACARVESWG
Trigger: ACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR CCA 90 bp GGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTaGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTC +
Preference number: 1 (lower is better)
Translates to: GARKRWMFSRVYSCR*LNCACARVESWGPF
Trigger: GAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR CCA 90 bp GAATGTATGTGTCTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTaGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCT +
Preference number: 1 (lower is better)
Translates to: ECMCLCAGFRGARKR*MFSRVYSCRWLNCA
Trigger: AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAGACACATACATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTGGCTTAACTGTGCTTaGGCGCGCGTGGAAAGCTGG +
Preference number: 2 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCWLNCA*ARVESW
Trigger: CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGTGCTTGCGCGCGCGTaGAAAGCTGGGGTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: NQNSTILALVCECVCVCVVLARA*KAGVLS
Trigger: GGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCAC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR TCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTCCCGGGTAAATATTTaGATGAGGTTCCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: NQNSTILALVCECVCVCVSRVNI*MRFLGG
Trigger: TCCTCCCAGGAACCTCATTCAAATATTTACCCGGGA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR CCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGTGCTTGCGCGCGCGTaGAAAGCTGGGGTCCTTTCC +
Preference number: 2 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPVLARA*KAGVLS
Trigger: GGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCAC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATGGCTTAACTGTGCTTaGGCGCGCGTGGAAAGCTGG +
Preference number: 2 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSWLNCA*ARVESW
Trigger: CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTGCAGGGTTTCGGGGTaGAAGGAAGCGGTGGATGTT +
Preference number: 2 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPCRVSG*KEAVDV
Trigger: AACATCCACCGCTTCCTTGCACCCCGAAACCCTGCA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGTTTATTCCTGCAGGTaGCTTAACTGTGCTTGCGCG +
Preference number: 2 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSVYSCR*LNCACA
Trigger: CGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAAC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR TCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATCCCGGGTAAATATTTaGATGAGGTTCCTGGGAGGA +
Preference number: 2 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSSRVNI*MRFLGG
Trigger: TCCTCCCAGGAACCTCATTCAAATATTTACCCGGGA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTCGCGTGTTTATTCCTaGAGGTGGCTTAACTGTGCT +
Preference number: 2 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPSRVYS*RWLNCA
Trigger: AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATCGCGTGTTTATTCCTaGAGGTGGCTTAACTGTGCT +
Preference number: 2 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSSRVYS*RWLNCA
Trigger: AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGTTTATTCCTGCAGGTaGCTTAACTGTGCTTGCGCG +
Preference number: 2 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTVYSCR*LNCACA
Trigger: CGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAAC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGGTGCAAGGAAGCGGTaGATGTTCTCGCGTGTTTAT +
Preference number: 2 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTGARKR*MFSRVY
Trigger: ATAAACACGCGAGAACATCCACCGCTTCCTTGCACC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR CCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTAAAACTCCACCATCCTaGCTCTTGTGTGTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPKTPPS*LLCVSV
Trigger: CACACTCACACACAAGAGCCAGGATGGTGGAGTTTT...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCTCGCGTGTTTATTCCTaGAGGTGGCTTAACTGTGCT +
Preference number: 2 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTSRVYS*RWLNCA
Trigger: AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGA...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR GCA 72 bp GCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTaGAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAA +
Preference number: 3 (lower is better)
Translates to: ARKRWMFSRVYS*RWLNCACARVE
Trigger: TTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR CCA 72 bp AAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTaGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGG +
Preference number: 3 (lower is better)
Translates to: KRWMFSRVYSCR*LNCACARVESW
Trigger: CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR CCA 72 bp TGTCTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTaGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTT +
Preference number: 3 (lower is better)
Translates to: CLCAGFRGARKR*MFSRVYSCRWL
Trigger: AAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR CCA 72 bp CCTCAAACAACCCACCCAATCAAAACTCCACCATCCTaGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: PQTTHPIKTPPS*LLCVSVSVCVC
Trigger: ACACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATTGGGTGGGTTGTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCCACCATCCTGGCTCTaGTGTGTGAGTGTGTCTGTG +
Preference number: 3 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPPPSWL*CVSVSV
Trigger: CACAGACACACTCACACACAAGAGCCAGGATGGTGG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAAAATGTACCTTTGTTTaGGGGAAAGTGAAAATGCGT +
Preference number: 3 (lower is better)
Translates to: KSIIISLYMHFPLETQIEKCTFV*GKVKMR
Trigger: ACGCATTTTCACTTTCCCCAAAACAAAGGTACATTT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
3UTR CCA 72 bp AGTCCATTATCATTTCATTATACATGCACTTCCCCCTaGAAACTCAAATTGAATGGTGATCCCTTTTTATTC +
Preference number: 3 (lower is better)
Translates to: SPLSFHYTCTSP*KLKLNGDPFLF
Trigger: GAATAAAAAGGGATCACCATTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAAGGGCGGCAGCAGCGTaGGCGCCGAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRRAAAA*APRAAA
Trigger: TGCAGCTGCCCTCGGCGCTCACGCTGCTGCCGCCCT...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGCTGCTGCTGGTCTTTaGCACCGCCGCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRAAAGL*HRRRRP
Trigger: GGGGCGGCGGCGGCGGTGGCAAAGACCAGCAGCAGC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGATGGATGGCTTCGCGCTaGTGCCGCCGGCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRWMASR*CRRRQR
Trigger: CCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCA...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGATTCCGCCCCCACCGCTaGTGCTGCCCGCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRFRPHR*CCPRCP
Trigger: TGGGCAGCGCGGGCAGCACCAGCGGTGGGGGCGGAA...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACGGCGGGATAGAGTCTaGTGGGGCCCACGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRRRDRV*WGPRRR
Trigger: CCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAGGGCGGCAGCAGCGTaGGCGCCGAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRAAAA*APRAAA
Trigger: TGCAGCTGCCCTCGGCGCTCACGCTGCTGCCGCCCT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACGCGTGCGGACCCCGTaGGTATTTCCCCGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRRVRTP*VFPRSP
Trigger: CGGACTCCGGGGAAATACGCACGGGGTCCGCACGCG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTGGATGGCTTCGCGCTaGTGCCGCCGGCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCWMASR*CRRRQR
Trigger: CCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGCTGTCCCCTCCTCCTaGAGGCTGGCCGCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWAVPSS*RLAARA
Trigger: TGCCCGCGCGGCCAGCCTGCAGGAGGAGGGGACAGC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTGCCCCTCGCAGGACTaGCGCCCTCGAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCCPSQD*RPRAGW
Trigger: CCAGCCGGCTCGAGGGCGGCAGTCCTGCGAGGGGCA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGAGCGCCGAGGGCAGCTaGAGCTGCAAGGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWSAEGS*SCKGPA
Trigger: CGCGGGGCCCTTGCAGCTGCAGCTGCCCTCGGCGCT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCGCCCCCGTGGTCCTTaGTGCCCACGCCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRPRGP*CPRRRL
Trigger: AAGGCGGCGGCGTGGGCACCAAGGACCACGGGGGCG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGCGCCCCCGTGGTCCTTaGTGCCCACGCCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWRPRGP*CPRRRL
Trigger: AAGGCGGCGGCGTGGGCACCAAGGACCACGGGGGCG...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGCCGGCGGCAGCGGATaGGTTGCTGCTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRAGGSG*VAAFRG
Trigger: TCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGCCCGTCTCGGGACTTaGCGGCGCGAAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWARLGT*RREEAA
Trigger: GGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTTCCGCCCCCACCGCTaGTGCTGCCCGCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCFRPHR*CCPRCP
Trigger: TGGGCAGCGCGGGCAGCACCAGCGGTGGGGGCGGAA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCGCTGCGGCACCGAAGTaGAGGCGCTGCCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCAAAPK*RRCPSQ
Trigger: CTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGC...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGGAGGGGGCCGGCTTTaGAAAACTTGGGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRGGGRL*KTWDPG
Trigger: GCCCGGGTCCCAAGTTTTGCAAAGCCGGCCCCCTCC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGATGGCTTCGCGCTGCTaGCGCCGGCGGCAGCGGATG +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWMASRC*RRRQRM
Trigger: CATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCAT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGATGGCTTCGCGCTGCTaGCGCCGGCGGCAGCGGATG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWMASRC*RRRQRM
Trigger: CATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCAT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCCCGCGCTGCCCAGCTaGGGCACCGAAGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCPALPS*GTEVKA
Trigger: CGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGTCGGCGGGGTGGCATaGCTCGAGCGCGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWVGGVA*LERAQL
Trigger: AAGCTGGGCGCGCTCGAGCCATGCCACCCCGCCGAC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCGGGATAGAGTCTGGTaGGGCCCACGCCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCRDRVW*GPRRRR
Trigger: CCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGGCAGACACAGCGAGGTaGAGGAGGGCGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWADTAR*RRAAAA
Trigger: CGCTGCTGCCGCCCTCCTTCACCTCGCTGTGTCTGC...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACAGCGGATGGGTTGCTaGTTTCCGGGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRQRMGC*FPGRGM
Trigger: CATCCCCCTCCCCGGAAAGCAGCAACCCATCCGCTG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCGGCAGCGGATGGGTTaGTGCTTTCCGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRQRMG*CFPGRG
Trigger: CCCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCGGCAGCGGATGGGTTaGTGCTTTCCGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCRQRMG*CFPGRG
Trigger: CCCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACCAGGCCGAAGTAGCTaGCCGAGGCTCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRPGRSS*PRLGTA
Trigger: AGCAGTACCGAGCCTCGGGCAGCTACTTCGGCCTGG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCCTCCACGAAGGCGCTaGGCTTCGCCTCGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWPPRRR*ASPRPS
Trigger: AGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCGCCCCCGTGGTCCTTaGTGCCCACGCCGCCGCCTT +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYRPRGP*CPRRRL
Trigger: AAGGCGGCGGCGTGGGCACCAAGGACCACGGGGGCG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGGCCGGCGGCAGCGGATaGGTTGCTGCTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWAGGSG*VAAFRG
Trigger: TCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGC...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCCGCCGCCAGCGTCCTaGTCCTCGGAGGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYPPPAS*SSEATP
Trigger: GGGAGTCGCCTCCGAGGACCAGGACGCTGGCGGCGG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTTCCGCCCCCACCGCTaGTGCTGCCCGCGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYFRPHR*CCPRCP
Trigger: TGGGCAGCGCGGGCAGCACCAGCGGTGGGGGCGGAA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAGGTCCGCGGCCCCCTaGAGCTTCACCGCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRSAAP*SFTARG
Trigger: CCCTCTAGCGGTGAAGCTCCAGGGGGCCGCGGACCT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCGGCAGCGGAGCTCTTaGGCCAGAAGGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRQRSS*ARRRWR
Trigger: ACGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCGGCAGCGGAGCTCTTaGGCCAGAAGGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCRQRSS*ARRRWR
Trigger: ACGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGGTGGTGGCGCTCCCTaGAGGACTCATTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRGGGAP*RTHCRW
Trigger: CCATCTGCAATGAGTCCTTCAGGGAGCGCCACCACC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAGGAGGGGATGGAGTTaGCGAGGCCGTCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRRGWS*RGRLGS
Trigger: GCTCCCGAGACGGCCTCGGCAACTCCATCCCCTCCT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGAGGGGGCCGGCTTTaGAAAACTTGGGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWGGGRL*KTWDPG
Trigger: GCCCGGGTCCCAAGTTTTGCAAAGCCGGCCCCCTCC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCGGGCTGGGGAGCAGCTaGTGCCTCCCCGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCGLGSS*CLPGSF
Trigger: AAAACTCCCGGGGAGGCAGCAGCTGCTCCCCAGCCC...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGAGGCTCGGTACTGCTaGGGTGTGCACACCAGATCC +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFREARYC*GVHTRS
Trigger: GGATCTGGTGTGCACACCGCAGCAGTACCGAGCCTC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTGGTGCTGCCCGCGCTaGCCAGCTGCGGCACCGAAG +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYWCCPR*PAAAPK
Trigger: CTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGTGCTGCTGCTGCTGCTaGTCTTTGCCACCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWCCCCC*SLPPPP
Trigger: CGGCGGCGGTGGCAAAGACCAGCAGCAGCAGCAGCA...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTGCTGCTGCTGCTGCTaGTCTTTGCCACCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCCCCCC*SLPPPP
Trigger: CGGCGGCGGTGGCAAAGACCAGCAGCAGCAGCAGCA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTGCCCGTCTCGGGACTTaGCGGCGCGAAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAARLGT*RREEAA
Trigger: GGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGC...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCCGCCGCCAGCGTCCTaGTCCTCGGAGGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAPPPAS*SSEATP
Trigger: GGGAGTCGCCTCCGAGGACCAGGACGCTGGCGGCGG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCGGCGGGATAGAGTCTaGTGGGGCCCACGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYRRDRV*WGPRRR
Trigger: CCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGCGGGCTCCTTGCCGGTaGGTCTGCTCCACTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWRAPCR*VCSTSG
Trigger: TCCTGAAGTGGAGCAGACTCACCGGCAAGGAGCCCG...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR TCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACCCAGGTGGCTTTTATaGCCGCTTTCCAGCGGAAGG +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRPRWLL*PLSSGR
Trigger: CCTTCCGCTGGAAAGCGGTCATAAAAGCCACCTGGG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCGCGTGCGGACCCCGTaGGTATTTCCCCGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYRVRTP*VFPRSP
Trigger: CGGACTCCGGGGAAATACGCACGGGGTCCGCACGCG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGCAGCGGATGGGTTGCTaGTTTCCGGGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWQRMGC*FPGRGM
Trigger: CATCCCCCTCCCCGGAAAGCAGCAACCCATCCGCTG...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTATGGCTTCGCGCTGCTaGCGCCGGCGGCAGCGGATG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAMASRC*RRRQRM
Trigger: CATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCAT...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCCCGAGGCTCGGTACTaGTGCGGTGTGCACACCAGA +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWPEARY*CGVHTR
Trigger: TCTGGTGTGCACACCGCAGCAGTACCGAGCCTCGGG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCCCGAGGCTCGGTACTaGTGCGGTGTGCACACCAGA +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCPEARY*CGVHTR
Trigger: TCTGGTGTGCACACCGCAGCAGTACCGAGCCTCGGG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGCCAGGCCGAAGTAGCTaGCCGAGGCTCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWPGRSS*PRLGTA
Trigger: AGCAGTACCGAGCCTCGGGCAGCTACTTCGGCCTGG...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATGCGAGAAGGCGCTTTTaGGCTCGTCCGACGCGGCGC +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYARRRF*ARPTRR
Trigger: GCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGC...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGTGGTGGAGGAGGGGATaGAGTTGCCGAGGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWWWRRG*SCRGRL
Trigger: GAGACGGCCTCGGCAACTCCATCCCCTCCTCCACCA...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGATTCACATCCAGCGGGTaGTGGAGGAGGGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRFTSSG*WRRGWS
Trigger: ACTCCATCCCCTCCTCCACCACCCGCTGGATGTGAA...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGTGGAAGTCTGTGGATaGCTTCGCGCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWVEVCG*LRAAAA
Trigger: GGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCAC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCGGGATAGAGTCTGGTaGGGCCCACGCCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCARDRVW*GPRRRR
Trigger: CCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATGGAGTCCGCGTTCCGTaGAAGGGAGAGGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYGVRVP*KGEGCG
Trigger: ACCGCACCCCTCTCCCTTTCACGGAACGCGGACTCC...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR TCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACCAACCGCAGCCACATaGGACCTTCTGAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRPTAAT*DLLRNH
Trigger: ATGGTTCCTCAGAAGGTCTCATGTGGCTGCGGTTGG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGCTGCTGCTGGTCTTTaGCACCGCCGCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVAAAGL*HRRRRP
Trigger: GGGGCGGCGGCGGCGGTGGCAAAGACCAGCAGCAGC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTGGATGGCTTCGCGCTaGTGCCGCCGGCGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVWMASR*CRRRQR
Trigger: CCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGAGGCTCGGTACTGCTaGGGTGTGCACACCAGATCC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWEARYC*GVHTRS
Trigger: GGATCTGGTGTGCACACCGCAGCAGTACCGAGCCTC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGGAGGCTCGGTACTGCTaGGGTGTGCACACCAGATCC +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWEARYC*GVHTRS
Trigger: GGATCTGGTGTGCACACCGCAGCAGTACCGAGCCTC...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCCTCCACGAAGGCGCTaGGCTTCGCCTCGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAPPRRR*ASPRPS
Trigger: AGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTGCCCCTCGCAGGACTaGCGCCCTCGAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVCPSQD*RPRAGW
Trigger: CCAGCCGGCTCGAGGGCGGCAGTCCTGCGAGGGGCA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTACAGGAAGGGGCTCTaGTTAGGCAGGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYYRKGL*LGRPPP
Trigger: CGGCGGCGGCCTGCCTAAGCAGAGCCCCTTCCTGTA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGAGCGCCGAGGGCAGCTaGAGCTGCAAGGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVSAEGS*SCKGPA
Trigger: CGCGGGGCCCTTGCAGCTGCAGCTGCCCTCGGCGCT...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGATGCGGAAGGAGGCATTaGACTTGGCGCACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRCGRRH*TWRTSS
Trigger: AGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCA...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGATCCCAGATGCCTCGCTaGATGCCAGTATCCTCCATC +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRSQMPR*MPVSSI
Trigger: GATGGAGGATACTGGCATCCAGCGAGGCATCTGGGA...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACGGCTTTGCAAAACTTaGGACCCGGGCCTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRRLCKT*DPGLKV
Trigger: CACCTTTAGGCCCGGGTCCCAAGTTTTGCAAAGCCG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCCGCCGCCAGCGTCCTaGTCCTCGGAGGCGACTCCC +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVPPPAS*SSEATP
Trigger: GGGAGTCGCCTCCGAGGACCAGGACGCTGGCGGCGG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACGAGAAAGAGCGTGCTaGCTGCGAGAAGGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRRERAC*LREGAF
Trigger: AAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGAGGCATTGCACTTaGCGCACCAGTTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCRRHCT*RTSSAR
Trigger: CCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCT...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGAGGAGGCATTGCACTTaGCGCACCAGTTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWRRHCT*RTSSAR
Trigger: CCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCCCTGGAGCCACCGCTaGTTTGCGCAGCTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYPWSHR*FAQLVA
Trigger: GGCAACTAGCTGCGCAAATCAGCGGTGGCTCCAGGG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACGTCTTTGGCAATCCTaGGGAGAGAGCGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRRLWQS*GESGRT
Trigger: TGTTCTACCGCTCTCTCCGCAGGATTGCCAAAGACG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTGCTGCTGCTaGTGGTCTTTGCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYSCCCC*WSLPPP
Trigger: CGGCGGTGGCAAAGACCAGCAGCAGCAGCAGCAGGA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATGCCTCCTGCTGCTGCTaGTGCTGGTCTTTGCCACCG +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYASCCC*CWSLPP
Trigger: CGGTGGCAAAGACCAGCAGCAGCAGCAGCAGGAGGC...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTGGGCTGGGGAGCAGCTaGTGCCTCCCCGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAGLGSS*CLPGSF
Trigger: AAAACTCCCGGGGAGGCAGCAGCTGCTCCCCAGCCC...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTACTGCTGCGGTGTaGACACCAGATCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWGTAAV*TPDPPW
Trigger: CCAAGGAGGATCTGGTGTGCACACCGCAGCAGTACC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCCCGCGCTGCCCAGCTaGGGCACCGAAGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVPALPS*GTEVKA
Trigger: CGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGCTCTTCCTTATCTCTaGCCGATTGGACCAACCGCA +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRALPYL*PIGPTA
Trigger: TGCGGTTGGTCCAATCGGCCAGAGATAAGGAAGAGC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTACACCAGATCCTCCTTaGAGGCCGGGAGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCATPDPP*RPGGAA
Trigger: AGCGGCCCCTCCCGGCCTCCAAGGAGGATCTGGTGT...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGTCGGCGGGGTGGCATaGCTCGAGCGCGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVVGGVA*LERAQL
Trigger: AAGCTGGGCGCGCTCGAGCCATGCCACCCCGCCGAC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCGCGCGCGTGGAAAGCTaGGGTCCTTTCCGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCARVES*GPFRVN
Trigger: ATTGACTCGGAAAGGACCCCAGCTTTCCACGCGCGC...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGGAACCATTTGCTGCTaGGGTGTCTACCCGAAAGAT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRGTICC*GVYPKD
Trigger: ATCTTTCGGGTAGACACCTCAGCAGCAAATGGTTCC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCCAACCGCAGCCACATaGGACCTTCTGAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWPTAAT*DLLRNH
Trigger: ATGGTTCCTCAGAAGGTCTCATGTGGCTGCGGTTGG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCCAACCGCAGCCACATaGGACCTTCTGAGGAACCAT +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCPTAAT*DLLRNH
Trigger: ATGGTTCCTCAGAAGGTCTCATGTGGCTGCGGTTGG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTGCAGATGGGGCACTTaGGTTTCTCCTCTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYCRWGT*VSPLAA
Trigger: GGCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCTCCTTCAACGGGGCTaGAACACCACGTCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCALLQRG*NTTSLG
Trigger: CCCCAGCGACGTGGTGTTGCAGCCCCGTTGAAGGAG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTCCTGCTGCTGCTGCTaGTGGTCTTTGCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCASCCCC*WSLPPP
Trigger: CGGCGGTGGCAAAGACCAGCAGCAGCAGCAGCAGGA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATGGTGCCTCCTGCTGCTaGTGCTGCTGGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYGASCC*CCWSLP
Trigger: TGGCAAAGACCAGCAGCAGCAGCAGCAGGAGGCACC...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGCGAGAAGGCGCTTTTaGGCTCGTCCGACGCGGCGC +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVARRRF*ARPTRR
Trigger: GCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATACATCCAGCGGGTGGTaGAGGAGGGGATGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYTSSGW*RRGWSC
Trigger: GCAACTCCATCCCCTCCTCCACCACCCGCTGGATGT...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTCCCAGATGCCTCGCTaGATGCCAGTATCCTCCATC +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCSQMPR*MPVSSI
Trigger: GATGGAGGATACTGGCATCCAGCGAGGCATCTGGGA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCGCTGTGAAGTCTCTTaGGGCAGCGGAAACGCAGAT +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCRCEVS*GSGNAD
Trigger: ATCTGCGTTTCCGCTGCCCCAAGAGACTTCACAGCG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGTTTATTCCTGCAGGTaGCTTAACTGTGCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRVYSCR*LNCACA
Trigger: CGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAAC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAATTTCGCTAATGAGTTaGGGGTCTCCTCAGTTTCCC +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRISLMS*GSPQFP
Trigger: GGGAAACTGAGGAGACCCGCAACTCATTAGCGAAAT...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTTAGAGGCGCTGACTTaGCCCTTTAGTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCLEALT*PFSAAA
Trigger: AGCTGCTGCACTAAAGGGGCAAGTCAGCGCCTCTAA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCGGGAGCCTCGTTTGTaGGCTAAGCCACTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYREPRL*AKPLRG
Trigger: GCCTCTAAGTGGCTTAGCGCACAAACGAGGCTCCCG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTGAGCCACCGCTGATTTaGGCAGCTAGTTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAEPPLI*AASCLG
Trigger: CCCCAGGCAACTAGCTGCGCAAATCAGCGGTGGCTC...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGATGCCTCGCTGGATaGCAGTATCCTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCRCLAG*QYPPSQ
Trigger: CTGTGATGGAGGATACTGGCATCCAGCGAGGCATCT...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCATCTCCATCCCAGATaGCTCGCTGGATGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWHLHPR*LAGCQY
Trigger: ATACTGGCATCCAGCGAGGCATCTGGGATGGAGATG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCGTCTTTGGCAATCCTaGGGAGAGAGCGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRLWQS*GESGRT
Trigger: TGTTCTACCGCTCTCTCCGCAGGATTGCCAAAGACG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTACAGGAAGGGGCTCTaGTTAGGCAGGCCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVYRKGL*LGRPPP
Trigger: CGGCGGCGGCCTGCCTAAGCAGAGCCCCTTCCTGTA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACTCTTCCAAAATGATTaGAGAGGGCCTTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRLFQND*RGPFPV
Trigger: AACGGGGAAAGGCCCTCTCCAATCATTTTGGAAGAG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGATCTGTCAGACATTGTTaGACAGCCTTGGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRSVRHC*TALASP
Trigger: TGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGA...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTTATCTCTGGCCGATTaGACCAACCGCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCLSLAD*TNRSHM
Trigger: CATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCGCTCTTCCTTATCTCTaGCCGATTGGACCAACCGCA +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCALPYL*PIGPTA
Trigger: TGCGGTTGGTCCAATCGGCCAGAGATAAGGAAGAGC...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGTAACTCCTCGTCTTTaGCAATCCTGCGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWVTPRL*QSCGES
Trigger: GCTCTCTCCGCAGGATTGCCAAAGACGAGGAGTTAC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCCGCCTTGTTCGTCTTaGGGACTTATATCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCPPCSS*GLISAL
Trigger: CAGCGCTGATATAAGTCCCCAAGACGAACAAGGCGG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTGCTGCTGCTGCTGCTaGTCTTTGCCACCGCCGCCG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVCCCCC*SLPPPP
Trigger: CGGCGGCGGTGGCAAAGACCAGCAGCAGCAGCAGCA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAGTTTTCCAGCTCCCTaGCCAGGTTGTGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWSFPAP*PGCGSL
Trigger: CAGACTTCCACAACCTGGCCAGGGAGCTGGAAAACT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTAGGAGGCATTGCACTTaGCGCACCAGTTCTGCGCGG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCARRHCT*RTSSAR
Trigger: CCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCT...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAAGAGAGGTTGATAAATaGCACCCCAGGTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRREVDK*HPRWLL
Trigger: TAAAAGCCACCTGGGGTGTCATTTATCAACCTCTCT...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR TCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGCTTTGACAGCCTGGTaGCTGCAGTCCCAGGAGGCC +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVALTAW*LQSQEA
Trigger: GGCCTCCTGGGACTGCAGTCACCAGGCTGTCAAAGC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR TCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCGGAACCATTTGCTGCTaGGGTGTCTACCCGAAAGAT +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCGTICC*GVYPKD
Trigger: ATCTTTCGGGTAGACACCTCAGCAGCAAATGGTTCC...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGAAGAGGTGTTGGTGTTaGCGCCTTTTAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWKRCWC*RLLGSS
Trigger: GGAAGAGCCTAAAAGGCGGCAACACCAACACCTCTT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACTGGAACCGGGAAGATaGAATCGAGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRLEPGR*NRVFPF
Trigger: AAAAGGAAACACTCGATTGCATCTTCCCGGTTCCAG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCCCGAGGCTCGGTACTaGTGCGGTGTGCACACCAGA +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVPEARY*CGVHTR
Trigger: TCTGGTGTGCACACCGCAGCAGTACCGAGCCTCGGG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTGCGGAAGGAGGCATTaGACTTGGCGCACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYCGRRH*TWRTSS
Trigger: AGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGATACTCCTTTTTGTGGTaGGACCTCATATGGTACACC +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRYSFLW*DLIWYT
Trigger: GGTGTACCATATGAGGTCGCACCACAAAAAGGAGTA...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGGCTTAACTGTGCTTaGGCGCGCGTGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAWLNCA*ARVESW
Trigger: CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTTCACATCCAGCGGGTaGTGGAGGAGGGGATGGAGT +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAFTSSG*WRRGWS
Trigger: ACTCCATCCCCTCCTCCACCACCCGCTGGATGTGAA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCCAAATAAGGCCACCTaGAACCGGGAAGATGCAATC +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCPNKAT*NREDAI
Trigger: GATTGCATCTTCCCGGTTCCAGGTGGCCTTATTTGG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCATTGTTGGACAGCCTTaGCATCTCCATCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCIVGQP*HLHPRC
Trigger: GCATCTGGGATGGAGATGCCAAGGCTGTCCAACAAT...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGATTGTTGGACAGCCTTaGCATCTCCATCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWIVGQP*HLHPRC
Trigger: GCATCTGGGATGGAGATGCCAAGGCTGTCCAACAAT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCCTGGCCAGGTTGTaGAAGTCTGTGGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYSLARL*KSVDGF
Trigger: GAAGCCATCCACAGACTTCCACAACCTGGCCAGGGA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGGTTTATTCCTGCAGGTaGCTTAACTGTGCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWVYSCR*LNCACA
Trigger: CGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAAC...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTGGGGTATTGAGGCTTTaGCAGCCTGGTGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAGVLRL*QPGDCS
Trigger: ACTGCAGTCACCAGGCTGTCAAAGCCTCAATACCCC...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR TCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCTTATATCAGCGCTGTaGAGTCTCTTGGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCALISAL*SLLGQR
Trigger: CCGCTGCCCCAAGAGACTTCACAGCGCTGATATAAG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTCCCGGGTAAATATTTaGATGAGGTTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCSRVNI*MRFLGG
Trigger: TCCTCCCAGGAACCTCATTCAAATATTTACCCGGGA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGACTGGAAACGTTGGCTaGATTCCAGGCATGTGTAAG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWTGNVG*IPGMCK
Trigger: CTTACACATGCCTGGAATGCAGCCAACGTTTCCAGT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCTGCGAGAAAGAGCGTaGTGGCTGCGAGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVLRERA*WLREGA
Trigger: AGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTCGCGTGTTTATTCCTaGAGGTGGCTTAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCSRVYS*RWLNCA
Trigger: AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCAGGGTTTCGGGGTaGAAGGAAGCGGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCACRVSG*KEAVDV
Trigger: AACATCCACCGCTTCCTTGCACCCCGAAACCCTGCA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGATGTATGTGTCTTTGTaGAGGGTTTCGGGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWMYVSL*RVSGCK
Trigger: CTTGCACCCCGAAACCCTGCACAAAGACACATACAT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTGCAACACCACGTCGCTaGGGAATCTCGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAATPRR*GISGFF
Trigger: AAAGAAGCCCGAGATTCCCCAGCGACGTGGTGTTGC...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTTATCTCTGGCCGATTaGACCAACCGCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYLSLAD*TNRSHM
Trigger: CATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCCCATTCATTTTGTTGTaGGATCTAGAGGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCPFILL*DLEGQS
Trigger: GCTCTGCCCCTCTAGATCCCACAACAAAATGAATGG...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGTCAAACTGGAAACGTTaGCTGCATTCCAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWSNWKR*LHSRHV
Trigger: CACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGA...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCGGCTTTGCAAAACTTaGGACCCGGGCCTAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCARLCKT*DPGLKV
Trigger: CACCTTTAGGCCCGGGTCCCAAGTTTTGCAAAGCCG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGGTGCGACCTCATATaGTACACCAGGTCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAWCDLI*YTRSEV
Trigger: GACCTCCGACCTGGTGTACCATATGAGGTCGCACCA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGAAAACTCCACCATCCTaGCTCTTGTGTGTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWKTPPS*LLCVSV
Trigger: CACACTCACACACAAGAGCCAGGATGGTGGAGTTTT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAGATGCTTCCCAGGCTaGTTTGATAGTATTTTGCCG +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRCFPG*FDSILP
Trigger: CGGCAAAATACTATCAAATCAGCCTGGGAAGCATCT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR TCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTACTCCATGTTAGTTTaGTCCTCTCCCAGCTTTGAG +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCYSMLV*SSPSFE
Trigger: CTCAAAGCTGGGAGAGGATCAAACTAACATGGAGTA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR TCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTAGGGCGGCAGCAGCGTaGGCGCCGAGGGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPRAAAA*APRAAA
Trigger: TGCAGCTGCCCTCGGCGCTCACGCTGCTGCCGCCCT...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAGGTCTTTAACAGCCTaGAAGTTGACTCCTTCAACG +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWRSLTA*KLTPST
Trigger: CGTTGAAGGAGTCAACTTGCAGGCTGTTAAAGACCT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCTGGAACCGGGAAGATaGAATCGAGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWLEPGR*NRVFPF
Trigger: AAAAGGAAACACTCGATTGCATCTTCCCGGTTCCAG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCGTCTTTGGCAATCCTaGGGAGAGAGCGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCARLWQS*GESGRT
Trigger: TGTTCTACCGCTCTCTCCGCAGGATTGCCAAAGACG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGCTGTCCCCTCCTCCTaGAGGCTGGCCGCGCGGGCA +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPAVPSS*RLAARA
Trigger: TGCCCGCGCGGCCAGCCTGCAGGAGGAGGGGACAGC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTGCCCCTCGCAGGACTaGCGCCCTCGAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPCPSQD*RPRAGW
Trigger: CCAGCCGGCTCGAGGGCGGCAGTCCTGCGAGGGGCA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGAAAGAGCGTGCTGGCTaGGAGAAGGCGCTTTTGCGC +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVKERAG*EKALLR
Trigger: GCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTT...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGTACTCCTTTTTGTGGTaGGACCTCATATGGTACACC +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWYSFLW*DLIWYT
Trigger: GGTGTACCATATGAGGTCGCACCACAAAAAGGAGTA...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCTACTCCTTTTTGTGGTaGGACCTCATATGGTACACC +
Preference number: 4 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCYSFLW*DLIWYT
Trigger: GGTGTACCATATGAGGTCGCACCACAAAAAGGAGTA...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTAGTTTTCCAGCTCCCTaGCCAGGTTGTGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCASFPAP*PGCGSL
Trigger: CAGACTTCCACAACCTGGCCAGGGAGCTGGAAAACT...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGCCCGTCTCGGGACTTaGCGGCGCGAAGAGGCGGCC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSARLGT*RREEAA
Trigger: GGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGGCATACTCCTTTTTGTaGTGCGACCTCATATGGTAC +
Preference number: 4 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWAYSFL*CDLIWY
Trigger: GTACCATATGAGGTCGCACCACAAAAAGGAGTATGC...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATGGTGCAAGGAAGCGGTaGATGTTCTCGCGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYGARKR*MFSRVY
Trigger: ATAAACACGCGAGAACATCCACCGCTTCCTTGCACC...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCTTATATCAGCGCTGTaGAGTCTCTTGGGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVLISAL*SLLGQR
Trigger: CCGCTGCCCCAAGAGACTTCACAGCGCTGATATAAG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGCTGCGGCACCGAAGTaGAGGCGCTGCCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQAAAPK*RRCPSQ
Trigger: CTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGCTGCGGCACCGAAGTaGAGGCGCTGCCCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPAAAPK*RRCPSQ
Trigger: CTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACCTGGAAACTCAAATTaGATGGTGATCCCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: CRWLNCACARVESWGPFRPGNSN*MVIPFY
Trigger: ATAAAAAGGGATCACCATTCAATTTGAGTTTCCAGG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTAAGAGGTGTTGGTGTTaGCGCCTTTTAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAKRCWC*RLLGSS
Trigger: GGAAGAGCCTAAAAGGCGGCAACACCAACACCTCTT...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAGCTGCTGCTGGTCTTTaGCACCGCCGCCGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEAAAGL*HRRRRP
Trigger: GGGGCGGCGGCGGCGGTGGCAAAGACCAGCAGCAGC...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACCCGCGCTGCCCAGCTaGGGCACCGAAGTGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQPALPS*GTEVKA
Trigger: CGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATGGTGCTGCCCGCGCTaGCCAGCTGCGGCACCGAAG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSWCCPR*PAAAPK
Trigger: CTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAAGCGCCGAGGGCAGCTaGAGCTGCAAGGGCCCCGCG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIESAEGS*SCKGPA
Trigger: CGCGGGGCCCTTGCAGCTGCAGCTGCCCTCGGCGCT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTGCGGAAGGAGGCATTaGACTTGGCGCACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVCGRRH*TWRTSS
Trigger: AGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCGCGTGTTTATTCCTaGAGGTGGCTTAACTGTGCT +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYSRVYS*RWLNCA
Trigger: AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCATGTCAAGAGGTGTTaGTGTTGCCGCCTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAHVKRC*CCRLLG
Trigger: GCCTAAAAGGCGGCAACACCAACACCTCTTGACATG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCCATTCATTTTGTTGTaGGATCTAGAGGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYPFILL*DLEGQS
Trigger: GCTCTGCCCCTCTAGATCCCACAACAAAATGAATGG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGTCGGCGGGGTGGCATaGCTCGAGCGCGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQVGGVA*LERAQL
Trigger: AAGCTGGGCGCGCTCGAGCCATGCCACCCCGCCGAC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACGGGATAGAGTCTGGTaGGGCCCACGCCGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSRDRVW*GPRRRR
Trigger: CCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGCAGACACAGCGAGGTaGAGGAGGGCGGCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPADTAR*RRAAAA
Trigger: CGCTGCTGCCGCCCTCCTTCACCTCGCTGTGTCTGC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTTAGAGGCGCTGACTTaGCCCTTTAGTGCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVLEALT*PFSAAA
Trigger: AGCTGCTGCACTAAAGGGGCAAGTCAGCGCCTCTAA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACGGCAGCGGATGGGTTaGTGCTTTCCGGGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSRQRMG*CFPGRG
Trigger: CCCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCCTCCACGAAGGCGCTaGGCTTCGCCTCGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPPPRRR*ASPRPS
Trigger: AGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATGGTGCTGCCCGCGCTaGCCAGCTGCGGCACCGAAG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEWCCPR*PAAAPK
Trigger: CTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGCGAGAAGGCGCTTTTaGGCTCGTCCGACGCGGCGC +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPARRRF*ARPTRR
Trigger: GCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGTCATTTCATTATACATaGACTTCCCCCTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: RVYSCRWLNCACARVESWSFHYT*TSPWKL
Trigger: GAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGA...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTCATATAGGGAAGTATaGCTCAGGACACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCASYREV*LRTQGP
Trigger: TGGTCCCTGTGTCCTGAGCCATACTTCCCTATATGA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGAGTTTTCCAGCTCCCTaGCCAGGTTGTGGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVSFPAP*PGCGSL
Trigger: CAGACTTCCACAACCTGGCCAGGGAGCTGGAAAACT...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAACGGCGGGATAGAGTCTaGTGGGGCCCACGCCGTCGG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIERRDRV*WGPRRR
Trigger: CCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCG...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGGTCCGCGGCCCCCTaGAGCTTCACCGCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSRSAAP*SFTARG
Trigger: CCCTCTAGCGGTGAAGCTCCAGGGGGCCGCGGACCT...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCGGCAGCGGAGCTCTTaGGCCAGAAGGCGGTGGCGT +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPRQRSS*ARRRWR
Trigger: ACGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGGAGGGGGCCGGCTTTaGAAAACTTGGGACCCGGGC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSGGGRL*KTWDPG
Trigger: GCCCGGGTCCCAAGTTTTGCAAAGCCGGCCCCCTCC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGGGCTGGGGAGCAGCTaGTGCCTCCCCGGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQGLGSS*CLPGSF
Trigger: AAAACTCCCGGGGAGGCAGCAGCTGCTCCCCAGCCC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATGTTATTTTGGAAGAGTaGGCTGGAGAGAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYVILEE*AGERLI
Trigger: TATCAACCTCTCTCCAGCCCACTCTTCCAAAATAAC...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTTCTCTGGAACTCAGTaGGGTATTGAGGCTTTGACA +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAFSGTQ*GIEALT
Trigger: TGTCAAAGCCTCAATACCCCACTGAGTTCCAGAGAA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGCCGGCGGCAGCGGATaGGTTGCTGCTTTCCGGGGA +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTAGGSG*VAAFRG
Trigger: TCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGTTTATTCCTGCAGGTaGCTTAACTGTGCTTGCGCG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVVYSCR*LNCACA
Trigger: CGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAAC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAGGAGTCCGCGTTCCGTaGAAGGGAGAGGGGTGCGGT +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEGVRVP*KGEGCG
Trigger: ACCGCACCCCTCTCCCTTTCACGGAACGCGGACTCC...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAAGGAGGGGATGGAGTTaGCGAGGCCGTCTCGGGAGC +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIERRGWS*RGRLGS
Trigger: GCTCCCGAGACGGCCTCGGCAACTCCATCCCCTCCT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTGGACACCCAGCGCGTaGGGACCCCGTGCGTATTTC +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPWTPSA*GPRAYF
Trigger: GAAATACGCACGGGGTCCGCACGCGCTGGGTGTCCA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATGGACACCCAGCGCGTaGGGACCCCGTGCGTATTTC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSWTPSA*GPRAYF
Trigger: GAAATACGCACGGGGTCCGCACGCGCTGGGTGTCCA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATCCTGCTGCTGCTGCTaGTGGTCTTTGCCACCGCCG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSSCCCC*WSLPPP
Trigger: CGGCGGTGGCAAAGACCAGCAGCAGCAGCAGCAGGA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGCCTCCTGCTGCTGCTaGTGCTGGTCTTTGCCACCG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSASCCC*CWSLPP
Trigger: CGGTGGCAAAGACCAGCAGCAGCAGCAGCAGGAGGC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAATTGGCGCACCAGTTCTaGGCGGGCAGACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQLAHQF*AGRHSE
Trigger: CTCGCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAA...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATTGGCGCACCAGTTCTaGGCGGGCAGACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSLAHQF*AGRHSE
Trigger: CTCGCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATGGTGGAGGAGGGGATaGAGTTGCCGAGGCCGTCTC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSWWRRG*SCRGRL
Trigger: GAGACGGCCTCGGCAACTCCATCCCCTCCTCCACCA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGCTGTGACAGAGAGCTaGACACCCAGCGCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPAVTES*TPSACG
Trigger: TCCGCACGCGCTGGGTGTCCAGCTCTCTGTCACAGC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGCTGTGACAGAGAGCTaGACACCCAGCGCGTGCGGA +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSAVTES*TPSACG
Trigger: TCCGCACGCGCTGGGTGTCCAGCTCTCTGTCACAGC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTCTGTCAGACATTGTTaGACAGCCTTGGCATCTCCA +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVSVRHC*TALASP
Trigger: TGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCCATTCATTTTGTTGTaGGATCTAGAGGGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVPFILL*DLEGQS
Trigger: GCTCTGCCCCTCTAGATCCCACAACAAAATGAATGG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGTGGAAGTCTGTGGATaGCTTCGCGCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSVEVCG*LRAAAA
Trigger: GGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCAC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGTGGAAGTCTGTGGATaGCTTCGCGCTGCTGCCGCC +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPVEVCG*LRAAAA
Trigger: GGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCAC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAACACCAGATCCTCCTTaGAGGCCGGGAGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIETPDPP*RPGGAA
Trigger: AGCGGCCCCTCCCGGCCTCCAAGGAGGATCTGGTGT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCACACCAGATCCTCCTTaGAGGCCGGGAGGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTTPDPP*RPGGAA
Trigger: AGCGGCCCCTCCCGGCCTCCAAGGAGGATCTGGTGT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGTGCTTGCGCGCGCGTaGAAAGCTGGGGTCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQVLARA*KAGVLS
Trigger: GGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCAC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGAAAACTCCACCATCCTaGCTCTTGTGTGTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVKTPPS*LLCVSV
Trigger: CACACTCACACACAAGAGCCAGGATGGTGGAGTTTT...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCCCTGGAGCCACCGCTaGTTTGCGCAGCTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTPWSHR*FAQLVA
Trigger: GGCAACTAGCTGCGCAAATCAGCGGTGGCTCCAGGG...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR TCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAATGCAGATGGGGCACTTaGGTTTCTCCTCTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQCRWGT*VSPLAA
Trigger: GGCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCA...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTGCAGATGGGGCACTTaGGTTTCTCCTCTCGCCGCC +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPCRWGT*VSPLAA
Trigger: GGCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGGTGGTGGCGCTCCCTaGAGGACTCATTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPGGGAP*RTHCRW
Trigger: CCATCTGCAATGAGTCCTTCAGGGAGCGCCACCACC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAACTCCTTCAACGGGGCTaGAACACCACGTCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIELLQRG*NTTSLG
Trigger: CCCCAGCGACGTGGTGTTGCAGCCCCGTTGAAGGAG...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGCCTCCTGCTGCTGCTaGTGCTGGTCTTTGCCACCG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTASCCC*CWSLPP
Trigger: CGGTGGCAAAGACCAGCAGCAGCAGCAGCAGGAGGC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGGTGCCTCCTGCTGCTaGTGCTGCTGGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPGASCC*CCWSLP
Trigger: TGGCAAAGACCAGCAGCAGCAGCAGCAGGAGGCACC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCAGCGGATGGGTTGCTaGTTTCCGGGGAGGGGGATG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTQRMGC*FPGRGM
Trigger: CATCCCCCTCCCCGGAAAGCAGCAACCCATCCGCTG...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAACCAGGCCGAAGTAGCTaGCCGAGGCTCGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEPGRSS*PRLGTA
Trigger: AGCAGTACCGAGCCTCGGGCAGCTACTTCGGCCTGG...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCTTGGCGCACCAGTTCTaGGCGGGCAGACACAGCGAG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTLAHQF*AGRHSE
Trigger: CTCGCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAA...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTCATTTCATTATACATaGACTTCCCCCTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCASFHYT*TSPWKL
Trigger: GAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGCATACTCCTTTTTGTaGTGCGACCTCATATGGTAC +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVAYSFL*CDLIWY
Trigger: GTACCATATGAGGTCGCACCACAAAAAGGAGTATGC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAGGTGGTGGCGCTCCCTaGAGGACTCATTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEGGGAP*RTHCRW
Trigger: CCATCTGCAATGAGTCCTTCAGGGAGCGCCACCACC...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCGGGAGCCTCGTTTGTaGGCTAAGCCACTTAGAGGC +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPREPRL*AKPLRG
Trigger: GCCTCTAAGTGGCTTAGCGCACAAACGAGGCTCCCG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGAGCCACCGCTGATTTaGGCAGCTAGTTGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTEPPLI*AASCLG
Trigger: CCCCAGGCAACTAGCTGCGCAAATCAGCGGTGGCTC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGGTGCCTCCTGCTGCTaGTGCTGCTGGTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTGASCC*CCWSLP
Trigger: TGGCAAAGACCAGCAGCAGCAGCAGCAGGAGGCACC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGGTACTGCTGCGGTGTaGACACCAGATCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQGTAAV*TPDPPW
Trigger: CCAAGGAGGATCTGGTGTGCACACCGCAGCAGTACC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGGTACTGCTGCGGTGTaGACACCAGATCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPGTAAV*TPDPPW
Trigger: CCAAGGAGGATCTGGTGTGCACACCGCAGCAGTACC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGCGAGAAAGAGCGTaGTGGCTGCGAGAAGGCGCT +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTLRERA*WLREGA
Trigger: AGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAG...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTGGCTTAACTGTGCTTaGGCGCGCGTGGAAAGCTGG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPWLNCA*ARVESW
Trigger: CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGTTATTTTGGAAGAGTaGGCTGGAGAGAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVVILEE*AGERLI
Trigger: TATCAACCTCTCTCCAGCCCACTCTTCCAAAATAAC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCACATCCAGCGGGTGGTaGAGGAGGGGATGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTTSSGW*RRGWSC
Trigger: GCAACTCCATCCCCTCCTCCACCACCCGCTGGATGT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGCGCGCGTGGAAAGCTaGGGTCCTTTCCGAGTCAAT +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSARVES*GPFRVN
Trigger: ATTGACTCGGAAAGGACCCCAGCTTTCCACGCGCGC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGACATGCACTTCCCCCTaGAAACTCAAATTGAATGGT +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVTCTSP*KLKLNG
Trigger: ACCATTCAATTTGAGTTTCCAGGGGGAAGTGCATGT...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATCCCAGATGCCTCGCTaGATGCCAGTATCCTCCATC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSSQMPR*MPVSSI
Trigger: GATGGAGGATACTGGCATCCAGCGAGGCATCTGGGA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACGCTGTGAAGTCTCTTaGGGCAGCGGAAACGCAGAT +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSRCEVS*GSGNAD
Trigger: ATCTGCGTTTCCGCTGCCCCAAGAGACTTCACAGCG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACGCTGTGAAGTCTCTTaGGGCAGCGGAAACGCAGAT +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQRCEVS*GSGNAD
Trigger: ATCTGCGTTTCCGCTGCCCCAAGAGACTTCACAGCG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTCCCTGGCCAGGTTGTaGAAGTCTGTGGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPSLARL*KSVDGF
Trigger: GAAGCCATCCACAGACTTCCACAACCTGGCCAGGGA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACGAGAAAGAGCGTGCTaGCTGCGAGAAGGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQRERAC*LREGAF
Trigger: AAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACGAGAAAGAGCGTGCTaGCTGCGAGAAGGCGCTTTT +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSRERAC*LREGAF
Trigger: AAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATGGTGCGACCTCATATaGTACACCAGGTCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSWCDLI*YTRSEV
Trigger: GACCTCCGACCTGGTGTACCATATGAGGTCGCACCA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCCTGGAAACTCAAATTaGATGGTGATCCCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: NQNSTILALVCECVCVCVPGNSN*MVIPFY
Trigger: ATAAAAAGGGATCACCATTCAATTTGAGTTTCCAGG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTATTTGCGCAGCTAGTTaGCTGGGGGTGATAAACGGG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPICAAS*LGVING
Trigger: CCCGTTTATCACCCCCAGGCAACTAGCTGCGCAAAT...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTAGATGCCTCGCTGGATaGCAGTATCCTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPRCLAG*QYPPSQ
Trigger: CTGTGATGGAGGATACTGGCATCCAGCGAGGCATCT...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCATCTCCATCCCAGATaGCTCGCTGGATGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPHLHPR*LAGCQY
Trigger: ATACTGGCATCCAGCGAGGCATCTGGGATGGAGATG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCTGCAGGGTTTCGGGGTaGAAGGAAGCGGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTCRVSG*KEAVDV
Trigger: AACATCCACCGCTTCCTTGCACCCCGAAACCCTGCA...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGCAACACCACGTCGCTaGGGAATCTCGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTATPRR*GISGFF
Trigger: AAAGAAGCCCGAGATTCCCCAGCGACGTGGTGTTGC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTTATCTCTGGCCGATTaGACCAACCGCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPLSLAD*TNRSHM
Trigger: CATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGTAACTCCTCGTCTTTaGCAATCCTGCGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQVTPRL*QSCGES
Trigger: GCTCTCTCCGCAGGATTGCCAAAGACGAGGAGTTAC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACCGCCTTGTTCGTCTTaGGGACTTATATCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQPPCSS*GLISAL
Trigger: CAGCGCTGATATAAGTCCCCAAGACGAACAAGGCGG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCTCCCTGGCCAGGTTGTaGAAGTCTGTGGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTSLARL*KSVDGF
Trigger: GAAGCCATCCACAGACTTCCACAACCTGGCCAGGGA...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATGGTGCGACCTCATATaGTACACCAGGTCGGAGGTC +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEWCDLI*YTRSEV
Trigger: GACCTCCGACCTGGTGTACCATATGAGGTCGCACCA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCAACTCAGTGGGGTATTaGGGCTTTGACAGCCTGGTG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTNSVGY*GFDSLV
Trigger: CACCAGGCTGTCAAAGCCTCAATACCCCACTGAGTT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR TCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCATCCTCTCCCAGCTTTaGGACCCTTCTCTGGAACTC +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTILSQL*DPSLEL
Trigger: GAGTTCCAGAGAAGGGTCTCAAAGCTGGGAGAGGAT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR TCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGGAACCATTTGCTGCTaGGGTGTCTACCCGAAAGAT +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSGTICC*GVYPKD
Trigger: ATCTTTCGGGTAGACACCTCAGCAGCAAATGGTTCC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCATTTGCGCAGCTAGTTaGCTGGGGGTGATAAACGGG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTICAAS*LGVING
Trigger: CCCGTTTATCACCCCCAGGCAACTAGCTGCGCAAAT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCAGATGCCTCGCTGGATaGCAGTATCCTCCATCACAG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTRCLAG*QYPPSQ
Trigger: CTGTGATGGAGGATACTGGCATCCAGCGAGGCATCT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCATCTCCATCCCAGATaGCTCGCTGGATGCCAGTAT +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTHLHPR*LAGCQY
Trigger: ATACTGGCATCCAGCGAGGCATCTGGGATGGAGATG...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAAGCTTCCCCCAAGATaGGCTCCGGAAAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSKLPPR*APESFS
Trigger: TGAAAAGCTTTCCGGAGCCCATCTTGGGGGAAGCTT...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAAAGCTTCCCCCAAGATaGGCTCCGGAAAGCTTTTCA +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQKLPPR*APESFS
Trigger: TGAAAAGCTTTCCGGAGCCCATCTTGGGGGAAGCTT...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACATGTCAAGAGGTGTTaGTGTTGCCGCCTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSHVKRC*CCRLLG
Trigger: GCCTAAAAGGCGGCAACACCAACACCTCTTGACATG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCCAAATAAGGCCACCTaGAACCGGGAAGATGCAATC +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPPNKAT*NREDAI
Trigger: GATTGCATCTTCCCGGTTCCAGGTGGCCTTATTTGG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACCAAATAAGGCCACCTaGAACCGGGAAGATGCAATC +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQPNKAT*NREDAI
Trigger: GATTGCATCTTCCCGGTTCCAGGTGGCCTTATTTGG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGTTGGACAGCCTTaGCATCTCCATCCCAGATGC +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQIVGQP*HLHPRC
Trigger: GCATCTGGGATGGAGATGCCAAGGCTGTCCAACAAT...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGTAACTCCTCGTCTTTaGCAATCCTGCGGAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTVTPRL*QSCGES
Trigger: GCTCTCTCCGCAGGATTGCCAAAGACGAGGAGTTAC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAACCGCCTTGTTCGTCTTaGGGACTTATATCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEPPCSS*GLISAL
Trigger: CAGCGCTGATATAAGTCCCCAAGACGAACAAGGCGG...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCCCAGGTGGCTTTTATaGCATTATGAAGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPPRWLL*HYEVEA
Trigger: TGCCTCCACTTCATAATGTCATAAAAGCCACCTGGG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR TCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTCCCGGGTAAATATTTaGATGAGGTTCCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPSRVNI*MRFLGG
Trigger: TCCTCCCAGGAACCTCATTCAAATATTTACCCGGGA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGCCAGGGGAGGATTTTaGTTGTTCCACTTTAGCAAG +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQARGGF*LFHFSK
Trigger: CTTGCTAAAGTGGAACAAGCAAAATCCTCCCCTGGC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACTGGAAACGTTGGCTaGATTCCAGGCATGTGTAAG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSTGNVG*IPGMCK
Trigger: CTTACACATGCCTGGAATGCAGCCAACGTTTCCAGT...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACTCTTCCAAAATGATTaGAGAGGGCCTTTCCCCGTT +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQLFQND*RGPFPV
Trigger: AACGGGGAAAGGCCCTCTCCAATCATTTTGGAAGAG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAACATGTCAAGAGGTGTTaGTGTTGCCGCCTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEHVKRC*CCRLLG
Trigger: GCCTAAAAGGCGGCAACACCAACACCTCTTGACATG...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAATCATATAGGGAAGTATaGCTCAGGACACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQSYREV*LRTQGP
Trigger: TGGTCCCTGTGTCCTGAGCCATACTTCCCTATATGA...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATCAAACTGGAAACGTTaGCTGCATTCCAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSSNWKR*LHSRHV
Trigger: CACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAAGGTCTTTAACAGCCTaGAAGTTGACTCCTTCAACG +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQRSLTA*KLTPST
Trigger: CGTTGAAGGAGTCAACTTGCAGGCTGTTAAAGACCT...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACTGGAACCGGGAAGATaGAATCGAGTGTTTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSLEPGR*NRVFPF
Trigger: AAAAGGAAACACTCGATTGCATCTTCCCGGTTCCAG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAACTGGAAACGTTGGCTaGATTCCAGGCATGTGTAAG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIETGNVG*IPGMCK
Trigger: CTTACACATGCCTGGAATGCAGCCAACGTTTCCAGT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCTTTCCGAGTCAATTATaGGAGGTCATGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTFPSQL*EVMCLE
Trigger: CTCCAGGCACATGACCTCGCATAATTGACTCGGAAA...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATTTCCGAGTCAATTATaGGAGGTCATGTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEFPSQL*EVMCLE
Trigger: CTCCAGGCACATGACCTCGCATAATTGACTCGGAAA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCATGTATGTGTCTTTGTaGAGGGTTTCGGGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTMYVSL*RVSGCK
Trigger: CTTGCACCCCGAAACCCTGCACAAAGACACATACAT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR GCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAATGTATGTGTCTTTGTaGAGGGTTTCGGGGTGCAAG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEMYVSL*RVSGCK
Trigger: CTTGCACCCCGAAACCCTGCACAAAGACACATACAT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATCATATAGGGAAGTATaGCTCAGGACACAGGGACCA +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIESYREV*LRTQGP
Trigger: TGGTCCCTGTGTCCTGAGCCATACTTCCCTATATGA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATCAAACTGGAAACGTTaGCTGCATTCCAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIESNWKR*LHSRHV
Trigger: CACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCAAAACTCCACCATCCTaGCTCTTGTGTGTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTKTPPS*LLCVSV
Trigger: CACACTCACACACAAGAGCCAGGATGGTGGAGTTTT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAAGAGAGGTTGATAAATaGCACCCCAGGTGGCTTTTA +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEREVDK*HPRWLL
Trigger: TAAAAGCCACCTGGGGTGTCATTTATCAACCTCTCT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAACATGCACTTCCCCCTaGAAACTCAAATTGAATGGT +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQTCTSP*KLKLNG
Trigger: ACCATTCAATTTGAGTTTCCAGGGGGAAGTGCATGT...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGCTTTTATGACATTATaGAGTGGAGGCAAGAATAGG +
Preference number: 4 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPAFMTL*SGGKNR
Trigger: CCTATTCTTGCCTCCACTTCATAATGTCATAAAAGC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGTCAGAGATCGCATTTaGTCGTGTAAGGGATTAATA +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSVRDRI*SCKGLI
Trigger: TATTAATCCCTTACACGAGCAAATGCGATCTCTGAC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR GCA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATCATTTCATTATACATaGACTTCCCCCTGGAAACTC +
Preference number: 4 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSSFHYT*TSPWKL
Trigger: GAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CCA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAATTTAGCAAGGCTCTTTaGAGTCCTGGCAAAAATACA +
Preference number: 4 (lower is better)
Translates to: SLKSIIISLYMHFPLETQFSKAL*SPGKNT
Trigger: TGTATTTTTGCCAGGACTCCAAAGAGCCTTGCTAAA...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCACATGCACTTCCCCCTaGAAACTCAAATTGAATGGT +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTTCTSP*KLKLNG
Trigger: ACCATTCAATTTGAGTTTCCAGGGGGAAGTGCATGT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR TCA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGGACCGCATTTTTATTaGAGTGCACCCTATTATTTC +
Preference number: 4 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTGPHFY*SAPYYF
Trigger: GAAATAATAGGGTGCACTTCAATAAAAATGCGGTCC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATTTAGCAAGGCTCTTTaGAGTCCTGGCAAAAATACA +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEFSKAL*SPGKNT
Trigger: TGTATTTTTGCCAGGACTCCAAAGAGCCTTGCTAAA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR TCA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAACCTGGAAACTCAAATTaGATGGTGATCCCTTTTTAT +
Preference number: 4 (lower is better)
Translates to: KSIIISLYMHFPLETQIEPGNSN*MVIPFY
Trigger: ATAAAAAGGGATCACCATTCAATTTGAGTTTCCAGG...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 90 bp GCGCCCGTTCCGCCCCCACCGCTGGTGCTGCCCGCGCTGCCCAGCTaGGGCACCGAAGTGAAGGCGCTGCCCCTCGCAGGACTGCCGCCC +
Preference number: 5 (lower is better)
Translates to: APVPPPPLVLPALPS*GTEVKALPLAGLPP
Trigger: GGGCGGCAGTCCTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCAGCGGTGGGGGCGGAACGGGCGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS TCA 90 bp CCCCACCGCTGGTGCTGCCCGCGCTGCCCAGCTGCGGCACCGAAGTaGAGGCGCTGCCCCTCGCAGGACTGCCGCCCTCGAGCCGGCTGG +
Preference number: 5 (lower is better)
Translates to: PHRWCCPRCPAAAPK*RRCPSQDCRPRAGW
Trigger: CCAGCCGGCTCGAGGGCGGCAGTCCTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCAGCGGTGGGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 90 bp GGGACAGCTGCGAGAAAGAGCGTGCTGGCTGCGAGAAGGCGCTTTTaGGCTCGTCCGACGCGGCGCCCTGGCCCCCGCCCGCGCCGCCTG +
Preference number: 5 (lower is better)
Translates to: GTAARKSVLAARRRF*ARPTRRPGPRPRRL
Trigger: CAGGCGGCGCGGGCGGGGGCCAGGGCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAGCTGTCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp GGAGCTTCACCGCTAGAGGGTCCGCGGCGGCGGGATAGAGTCTGGTaGGGCCCACGCCGTCGGCGGGGTGGCATGGCTCGAGCGCGCCCA +
Preference number: 5 (lower is better)
Translates to: GASPLEGPRRRDRVW*GPRRRRGGMARARP
Trigger: TGGGCGCGCTCGAGCCATGCCACCCCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCGCCGCGGACCCTCTAGCGGTGAAGCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp CCTGGAGCTTCACCGCTAGAGGGTCCGCGGCGGCGGGATAGAGTCTaGTGGGGCCCACGCCGTCGGCGGGGTGGCATGGCTCGAGCGCGC +
Preference number: 5 (lower is better)
Translates to: PGASPLEGPRRRDRV*WGPRRRRGGMARAR
Trigger: GCGCGCTCGAGCCATGCCACCCCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCGCCGCGGACCCTCTAGCGGTGAAGCTCCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 90 bp GCAGGCTGGCCGCGCGGGCAGCCTTCTTCACCTCCACGAAGGCGCTaGGCTTCGCCTCGCCCGTCTCGGGACTTGGCGGCGCGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: AGWPRGQPSSPPRRR*ASPRPSRDLAARRG
Trigger: GCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGGTGAAGAAGGCTGCCCGCGCGGCCAGCCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 90 bp TGGTCCTCGGAGGCGACTCCCGCGCCGTCGGCTGTCCCCTCCTCCTaGAGGCTGGCCGCGCGGGCAGCCTTCTTCACCTCCACGAAGGCG +
Preference number: 5 (lower is better)
Translates to: WSSEATPAPSAVPSS*RLAARAAFFTSTKA
Trigger: CGCCTTCGTGGAGGTGAAGAAGGCTGCCCGCGCGGCCAGCCTGCAGGAGGAGGGGACAGCCGACGGCGCGGGAGTCGCCTCCGAGGACCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 90 bp CCTCCTCCGGGAATTTCCTCTTTCCTTTGCCGCCGCCCGTGGCGATaGCGTCGGGACTCAGCTCCGCCTCCTGGTGGCCGCCGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: PPPGISSFLCRRPWR*RRDSAPPPGGRRRR
Trigger: GCGGCGGCGGCGGCCACCAGGAGGCGGAGCTGAGTCCCGACGGCATCGCCACGGGCGGCGGCAAAGGAAAGAGGAAATTCCCGGAGGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 90 bp CACCGCCGCCCTCCGCCGCCTCCTCCGGGAATTTCCTCTTTCCTTTaGCGCCGCCCGTGGCGATGCCGTCGGGACTCAGCTCCGCCTCCT +
Preference number: 5 (lower is better)
Translates to: HRRPPPPPPGISSFL*RRPWRCRRDSAPPP
Trigger: AGGAGGCGGAGCTGAGTCCCGACGGCATCGCCACGGGCGGCGGCAAAGGAAAGAGGAAATTCCCGGAGGAGGCGGCGGAGGGCGGCGGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 90 bp GCTCCCTGGCCAGGTTGTGGAAGTCTGTGGATGGCTTCGCGCTGCTaGCGCCGGCGGCAGCGGATGGGTTGCTGCTTTCCGGGGAGGGGG +
Preference number: 5 (lower is better)
Translates to: APWPGCGSLWMASRC*RRRQRMGCCFPGRG
Trigger: CCCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGGCCAGGGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 90 bp CCAGCTCCCTGGCCAGGTTGTGGAAGTCTGTGGATGGCTTCGCGCTaGTGCCGCCGGCGGCAGCGGATGGGTTGCTGCTTTCCGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PAPWPGCGSLWMASR*CRRRQRMGCCFPGR
Trigger: CCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGGCCAGGGAGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 90 bp CACCTCCACGAAGGCGCTGCGCTTCGCCTCGCCCGTCTCGGGACTTaGCGGCGCGAAGAGGCGGCCGTTCTCTTCCAGGCCGAAGTAGCT +
Preference number: 5 (lower is better)
Translates to: HLHEGAALRLARLGT*RREEAAVLFQAEVA
Trigger: AGCTACTTCGGCCTGGAAGAGAACGGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 90 bp CTTCTGGCCCAGCACCAGCGGGGACAGCTGCGAGAAAGAGCGTGCTaGCTGCGAGAAGGCGCTTTTGCGCTCGTCCGACGCGGCGCCCTG +
Preference number: 5 (lower is better)
Translates to: LLAQHQRGQLRERAC*LREGAFALVRRGAL
Trigger: CAGGGCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAGCTGTCCCCGCTGGTGCTGGGCCAGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp CCGGGAGTTTTCCAGCTCCCTGGCCAGGTTGTGGAAGTCTGTGGATaGCTTCGCGCTGCTGCCGCCGGCGGCAGCGGATGGGTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: PGVFQLPGQVVEVCG*LRAAAAGGSGWVAA
Trigger: AGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGGCCAGGGAGCTGGAAAACTCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 90 bp TTGGCGGCGCGAAGAGGCGGCCGTTCTCTTCCAGGCCGAAGTAGCTaGCCGAGGCTCGGTACTGCTGCGGTGTGCACACCAGATCCTCCT +
Preference number: 5 (lower is better)
Translates to: LAARRGGRSLPGRSS*PRLGTAAVCTPDPP
Trigger: AGGAGGATCTGGTGTGCACACCGCAGCAGTACCGAGCCTCGGGCAGCTACTTCGGCCTGGAAGAGAACGGCCGCCTCTTCGCGCCGCCAA
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 90 bp TCGGAGGTCATGCGGAAGGAGGCATTGCACTTGGCGCACCAGTTCTaGGCGGGCAGACACAGCGAGGTGAAGGAGGGCGGCAGCAGCGTG +
Preference number: 5 (lower is better)
Translates to: SEVMRKEALHLAHQF*AGRHSEVKEGGSSV
Trigger: CACGCTGCTGCCGCCCTCCTTCACCTCGCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCATGACCTCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGCGGCAGCGGATGGGTaGCTGCTTTCCGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRAAADG*LLSGEG
Trigger: CCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGCGCCCGTCTCGGGACTaGGCGGCGCGAAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: RVYSCRWLNCACARVESWRPSRD*AARRGG
Trigger: GCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCG...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp GGCTCCGGAAAGCTTTTCACATCCAGCGGGTGGTGGAGGAGGGGATaGAGTTGCCGAGGCCGTCTCGGGAGCCTCGTTTGTGCGCTAAGC +
Preference number: 5 (lower is better)
Translates to: GSGKLFTSSGWWRRG*SCRGRLGSLVCALS
Trigger: GCTTAGCGCACAAACGAGGCTCCCGAGACGGCCTCGGCAACTCCATCCCCTCCTCCACCACCCGCTGGATGTGAAAAGCTTTCCGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGCCCACGCCGCCGCCTaGTTCGTCTTGGGGACTTAT +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRAHAAA*FVLGTY
Trigger: ATAAGTCCCCAAGACGAACAAGGCGGCGGCGTGGGC...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCGCCCGTCTCGGGACTaGGCGGCGCGAAGAGGCGGC +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCARPSRD*AARRGG
Trigger: GCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTGCGGCAGCGGAGCTCTaGGGCCAGAAGGCGGTGGCG +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAAAAEL*GQKAVA
Trigger: CGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCGC...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 90 bp AGGGATTCTCTAGCCCTGGAGCCACCGCTGATTTGCGCAGCTAGTTaGCTGGGGGTGATAAACGGGCGTCGTCTCTCTTCAGGAGCGCCA +
Preference number: 5 (lower is better)
Translates to: RDSLALEPPLICAAS*LGVINGRRLSSGAP
Trigger: TGGCGCTCCTGAAGAGAGACGACGCCCGTTTATCACCCCCAGGCAACTAGCTGCGCAAATCAGCGGTGGCTCCAGGGCTAGAGAATCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS GCA 90 bp GCGGTTAGCTCCAGGGATTCTCTAGCCCTGGAGCCACCGCTGATTTaGGCAGCTAGTTGCCTGGGGGTGATAAACGGGCGTCGTCTCTCT +
Preference number: 5 (lower is better)
Translates to: AVSSRDSLALEPPLI*AASCLGVINGRRLS
Trigger: AGAGAGACGACGCCCGTTTATCACCCCCAGGCAACTAGCTGCGCAAATCAGCGGTGGCTCCAGGGCTAGAGAATCCCTGGAGCTAACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS-3UTR CAA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGCCCACGCCGCCGCCTaGTTCGTCTTGGGGACTTAT +
Preference number: 5 (lower is better)
Translates to: RVYSCRWLNCACARVESWAHAAA*FVLGTY
Trigger: ATAAGTCCCCAAGACGAACAAGGCGGCGGCGTGGGC...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAATGCGGAAGGAGGCATaGCACTTGGCGCACCAGTTC +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRMRKEA*HLAHQF
Trigger: GAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCAT...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 90 bp CCGAAAAGAATGACTTCAACCTCTGAGAGCTGCCATTCTCAGGGCTaGTTTCGCGAGCACCCAGGGAGGCACCGCTTTCCAGCGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PKRMTSTSESCHSQG*FREHPGRHRFPAEG
Trigger: CCCTTCCGCTGGAAAGCGGTGCCTCCCTGGGTGCTCGCGAAAGCAGCCCTGAGAATGGCAGCTCTCAGAGGTTGAAGTCATTCTTTTCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508061.6
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAGCTCCCTGGCCAGGTaGTGGAAGTCTGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWSSLAR*WKSVDG
Trigger: GCCATCCACAGACTTCCACAACCTGGCCAGGGAGCT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGAGCTCCCTGGCCAGGTaGTGGAAGTCTGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: RVYSCRWLNCACARVESWSSLAR*WKSVDG
Trigger: GCCATCCACAGACTTCCACAACCTGGCCAGGGAGCT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGCGGCAGCGGAGCTCTaGGGCCAGAAGGCGGTGGCG +
Preference number: 5 (lower is better)
Translates to: NQNSTILALVCECVCVCVAAAEL*GQKAVA
Trigger: CGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCGC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAGGAGGCATTGCACTaGGCGCACCAGTTCTGCGCG +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWKEALH*AHQFCA
Trigger: CGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCTT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCGGAAGGGGGCATCTTaGCGGCAGAGGCAGCGTTCC +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYRKGAS*RQRQRS
Trigger: GGAACGCTGCCTCTGCCGCAAAGATGCCCCCTTCCG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000504452.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACTTCTGAGGAACCATTaGCTGCTGAGGTGTCTACCC +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRLLRNH*LLRCLP
Trigger: GGGTAGACACCTCAGCAGCAAATGGTTCCTCAGAAG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGGAGGGGGCCGGCTTaGCAAAACTTGGGACCCGGG +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAWRGPA*QNLGPG
Trigger: CCCGGGTCCCAAGTTTTGCAAAGCCGGCCCCCTCCA...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp TTCCAAAATGATTGGAGAGGGCCTTTCCCCGTTTCACTAGGCACTTaGAGAAGCTGTGACAGAGAGCTGGACACCCAGCGCGTGCGGACC +
Preference number: 5 (lower is better)
Translates to: FQNDWRGPFPVSLGT*RSCDRELDTQRVRT
Trigger: GGTCCGCACGCGCTGGGTGTCCAGCTCTCTGTCACAGCTTCTCCAAGTGCCTAGTGAAACGGGGAAAGGCCCTCTCCAATCATTTTGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000515013.5
CDS-3UTR CAA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCGCCGCCTTGTTCGTCTaGGGGACTTATATCAGCGCT +
Preference number: 5 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCAALFV*GTYISA
Trigger: AGCGCTGATATAAGTCCCCAAGACGAACAAGGCGGC...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATAAGGAGGCATTGCACTaGGCGCACCAGTTCTGCGCG +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYKEALH*AHQFCA
Trigger: CGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCTT...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGCCACCATCCTGGCTCTaGTGTGTGAGTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWPPSWL*CVSVSV
Trigger: CACAGACACACTCACACACAAGAGCCAGGATGGTGG...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp TATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTaGGGTCCTTTCCGAGTCAATTATGCGAGGTCATGTGCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: YSCRWLNCACARVES*GPFRVNYARSCAWR
Trigger: TCTCCAGGCACATGACCTCGCATAATTGACTCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp CGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTaGAAAGCTGGGGTCCTTTCCGAGTCAATTATGCGAGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: RVFIPAGGLTVLARA*KAGVLSESIMRGHV
Trigger: CACATGACCTCGCATAATTGACTCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTGATTTTCCGGGCTCCTaGCCGGTGAGTCTGCTCCAC +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCADFPGS*PVSLLH
Trigger: GTGGAGCAGACTCACCGGCAAGGAGCCCGGAAAATC...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CAA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCGCTTCCCAGGCTGATTaGATAGTATTTTGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCASQAD*IVFCRR
Trigger: GCGGCGGCAAAATACTATCAAATCAGCCTGGGAAGC...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGTTAACAGCCTGCAAGTaGACTCCTTCAACGGGGCTG +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWLTACK*TPSTGL
Trigger: CAGCCCCGTTGAAGGAGTCAACTTGCAGGCTGTTAA...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CAA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGCATTGTTGGACAGCCTaGGCATCTCCATCCCAGATG +
Preference number: 5 (lower is better)
Translates to: RVYSCRWLNCACARVESWHCWTA*ASPSQM
Trigger: CATCTGGGATGGAGATGCCAAGGCTGTCCAACAATG...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAGTAACTCCTCGTCTTaGGCAATCCTGCGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWSNSSS*AILRRE
Trigger: CTCTCTCCGCAGGATTGCCAAAGACGAGGAGTTACT...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCCGGCTTTGCAAAACTaGGGACCCGGGCCTAAAGGT +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYPALQN*GPGPKG
Trigger: ACCTTTAGGCCCGGGTCCCAAGTTTTGCAAAGCCGG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATATGCGGAAGGAGGCATaGCACTTGGCGCACCAGTTC +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYMRKEA*HLAHQF
Trigger: GAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCAT...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGTCCCTGAAGGACTCATaGCAGATGGGGCACTTGAGT +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWSLKDS*QMGHLS
Trigger: ACTCAAGTGCCCCATCTGCAATGAGTCCTTCAGGGA...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 90 bp TGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTaGGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGTCAATTATGCG +
Preference number: 5 (lower is better)
Translates to: WMFSRVYSCRWLNCA*ARVESWGPFRVNYA
Trigger: CGCATAATTGACTCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp CGCCTTGTTCGTCTTGGGGACTTATATCAGCGCTGTGAAGTCTCTTaGGGCAGCGGAAACGCAGATGCGCCACATAGGGGAACTCAAACT +
Preference number: 5 (lower is better)
Translates to: RLVRLGDLYQRCEVS*GSGNADAPHRGTQT
Trigger: AGTTTGAGTTCCCCTATGTGGCGCATCTGCGTTTCCGCTGCCCCAAGAGACTTCACAGCGCTGATATAAGTCCCCAAGACGAACAAGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCTCGGGAGCCTCGTTaGTGCGCTAAGCCACTTAGA +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYSREPR*CAKPLR
Trigger: TCTAAGTGGCTTAGCGCACAAACGAGGCTCCCGAGA...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGATACGGTACTGTTCTCTaGTCAGTAGACTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRYGTVL*SVDLRA
Trigger: AGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTA...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCTTATCTCTGGCCGATaGGACCAACCGCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYLISGR*DQPQPH
Trigger: ATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAAG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGGACGACCCATTCATTTaGTTGTGGGATCTAGAGGGG +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWDDPFI*LWDLEG
Trigger: CCCCTCTAGATCCCACAACAAAATGAATGGGTCGTC...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGCCCACGCCGCCGCCTaGTTCGTCTTGGGGACTTAT +
Preference number: 5 (lower is better)
Translates to: NQNSTILALVCECVCVCVAHAAA*FVLGTY
Trigger: ATAAGTCCCCAAGACGAACAAGGCGGCGGCGTGGGC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCCGGCTTTGCAAAACTaGGGACCCGGGCCTAAAGGT +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAPALQN*GPGPKG
Trigger: ACCTTTAGGCCCGGGTCCCAAGTTTTGCAAAGCCGG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCCACCATCCTGGCTCTaGTGTGTGAGTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYPPSWL*CVSVSV
Trigger: CACAGACACACTCACACACAAGAGCCAGGATGGTGG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS TCA 90 bp TCTGCTCTTCCTTATCTCTGGCCGATTGGACCAACCGCAGCCACATaGGACCTTCTGAGGAACCATTTGCTGCTGAGGTGTCTACCCGAA +
Preference number: 5 (lower is better)
Translates to: SALPYLWPIGPTAAT*DLLRNHLLLRCLPE
Trigger: TTCGGGTAGACACCTCAGCAGCAAATGGTTCCTCAGAAGGTCTCATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAAGGAAGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 90 bp CTCGGGAGCCTCGTTTGTGCGCTAAGCCACTTAGAGGCGCTGACTTaGCCCTTTAGTGCAGCAGCTGATGCTAATGACTTGAGGTCTTTA +
Preference number: 5 (lower is better)
Translates to: LGSLVCALSHLEALT*PFSAAADANDLRSL
Trigger: TAAAGACCTCAAGTCATTAGCATCAGCTGCTGCACTAAAGGGGCAAGTCAGCGCCTCTAAGTGGCTTAGCGCACAAACGAGGCTCCCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATGTTTCCCTTCTGTCCTaGCACATTCCTCTAGCGAGG +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYVSLLS*HIPLAR
Trigger: CCTCGCTAGAGGAATGTGCAAGGACAGAAGGGAAAC...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGTATTTCGCTAATGAGTaGCGGGTCTCCTCAGTTTCC +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWYFANE*RVSSVS
Trigger: GGAAACTGAGGAGACCCGCAACTCATTAGCGAAATA...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CAA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGAGGGGAGGATTTTGCTaGTTCCACTTTAGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: RVYSCRWLNCACARVESWRGGFC*FHFSKA
Trigger: AGCCTTGCTAAAGTGGAACAAGCAAAATCCTCCCCT...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGGCTGATGCTAATGACTaGAGGTCTTTAACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWADAND*RSLTAC
Trigger: GCAGGCTGTTAAAGACCTCAAGTCATTAGCATCAGC...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS GCA 90 bp TTTAGTGCAGCAGCTGATGCTAATGACTTGAGGTCTTTAACAGCCTaGAAGTTGACTCCTTCAACGGGGCTGCAACACCACGTCGCTGGG +
Preference number: 5 (lower is better)
Translates to: FSAAADANDLRSLTA*KLTPSTGLQHHVAG
Trigger: CCCAGCGACGTGGTGTTGCAGCCCCGTTGAAGGAGTCAACTTGCAGGCTGTTAAAGACCTCAAGTCATTAGCATCAGCTGCTGCACTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000507025.1
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTGATCCTCTCCCAGCTTaGAGACCCTTCTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCADPLPA*RPFSGT
Trigger: AGTTCCAGAGAAGGGTCTCAAAGCTGGGAGAGGATC...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCAAGAGGTGTTGGTGTaGCCGCCTTTTAGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAQEVLV*PPFRLF
Trigger: GAAGAGCCTAAAAGGCGGCAACACCAACACCTCTTG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCCATGTCAAGAGGTGTaGGTGTTGCCGCCTTTTAGG +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAPCQEV*VLPPFR
Trigger: CCTAAAAGGCGGCAACACCAACACCTCTTGACATGG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTCATTGTTGGACAGCCTaGGCATCTCCATCCCAGATG +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAHCWTA*ASPSQM
Trigger: CATCTGGGATGGAGATGCCAAGGCTGTCCAACAATG...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGTACGGTACTGTTCTCTaGTCAGTAGACTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: RVYSCRWLNCACARVESWYGTVL*SVDLRA
Trigger: AGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTA...CCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATGACCCATTCATTTTGTaGTGGGATCTAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYDPFIL*WDLEGQ
Trigger: CTGCCCCTCTAGATCCCACAACAAAATGAATGGGTC...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCTCAAACTGGAAACGTaGGCTGCATTCCAGGCATGT +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYLKLET*AAFQAC
Trigger: ACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGAG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGACCCTGGAAACTCAAATaGAATGGTGATCCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRPWKLK*NGDPFL
Trigger: TAAAAAGGGATCACCATTCAATTTGAGTTTCCAGGG...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAAGGACCGCATTTTTATaGAAGTGCACCCTATTATTT +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRRTAFL*KCTLLF
Trigger: AAATAATAGGGTGCACTTCAATAAAAATGCGGTCCT...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CAA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGTCTCGGGAGCCTCGTTaGTGCGCTAAGCCACTTAGA +
Preference number: 5 (lower is better)
Translates to: NQNSTILALVCECVCVCVSREPR*CAKPLR
Trigger: TCTAAGTGGCTTAGCGCACAAACGAGGCTCCCGAGA...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAATCGAGTGTTTCCTTTaGCCTATTGTATCAGTGTAT +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRIECFL*PIVSVY
Trigger: ATACACTGATACAATAGGCAAAAGGAAACACTCGAT...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGCGGCAGCGGATGGGTaGCTGCTTTCCGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQAAADG*LLSGEG
Trigger: CCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCGCGGCAGCGGAGCTCTaGGGCCAGAAGGCGGTGGCG +
Preference number: 5 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTAAAEL*GQKAVA
Trigger: CGCCACCGCCTTCTGGCCCAAGAGCTCCGCTGCCGC...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAAAATGTACCTTTGTTTaGGGGAAAGTGAAAATGCGT +
Preference number: 5 (lower is better)
Translates to: CRWLNCACARVESWGPFRKCTFV*GKVKMR
Trigger: ACGCATTTTCACTTTCCCCAAAACAAAGGTACATTT...TCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCAAGAGGTGTTGGTGTaGCCGCCTTTTAGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: NQNSTILALVCECVCVCVQEVLV*PPFRLF
Trigger: GAAGAGCCTAAAAGGCGGCAACACCAACACCTCTTG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGAGTAACTCCTCGTCTTaGGCAATCCTGCGGAGAGAG +
Preference number: 5 (lower is better)
Translates to: NQNSTILALVCECVCVCVSNSSS*AILRRE
Trigger: CTCTCTCCGCAGGATTGCCAAAGACGAGGAGTTACT...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAGCGGCAGCGGATGGGTaGCTGCTTTCCGGGGAGGGG +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIEAAADG*LLSGEG
Trigger: CCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGC...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAATGCGAGAAGGCGCTTTaGCGCTCGTCCGACGCGGCG +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQCEKAL*RSSDAA
Trigger: CGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCA...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTGCGAGAAGGCGCTTTaGCGCTCGTCCGACGCGGCG +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPCEKAL*RSSDAA
Trigger: CGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTATCGCATACTCCTTTTaGTGGTGCGACCTCATATGG +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCAIAYSF*WCDLIW
Trigger: CCATATGAGGTCGCACCACAAAAAGGAGTATGCGAT...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTAACTGTAGTGTTATTTaGGAAGAGTGGGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCANCSVI*EEWAGE
Trigger: CTCTCCAGCCCACTCTTCCAAAATAACACTACAGTT...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CAA 90 bp TGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTGGGTTTCCTTTTGCCTATaGTATCAGTGTATTTCCATG +
Preference number: 5 (lower is better)
Translates to: CSRVFIPAGGLTVLARAWVSFCL*YQCISM
Trigger: CATGGAAATACACTGATACAATAGGCAAAAGGAAAC...CCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp GCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCGTTTCCTTTTGCCTATaGTATCAGTGTATTTCCATG +
Preference number: 5 (lower is better)
Translates to: AGFRGARKRWMFSRVYSCVSFCL*YQCISM
Trigger: CATGGAAATACACTGATACAATAGGCAAAAGGAAAC...GCAGGAATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGATCTGTCAGACATTGTaGGACAGCCTTGGCATCTCC +
Preference number: 5 (lower is better)
Translates to: NQNSTILALVCECVCVCVICQTL*DSLGIS
Trigger: GGAGATGCCAAGGCTGTCCAACAATGTCTGACAGAT...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AGGAAGCGGTGGATGTTCTCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTAATATCTGTCAGACATaGTTGGACAGCCTTGGCATC +
Preference number: 5 (lower is better)
Translates to: RKRWMFSRVYSCRWLNCANICQT*LDSLGI
Trigger: GATGCCAAGGCTGTCCAACAATGTCTGACAGATATT...AGCACAGTTAAGCCACCTGCAGGAATAAACACGCGAGAACATCCACCGCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGGACGACCCATTCATTTaGTTGTGGGATCTAGAGGGG +
Preference number: 5 (lower is better)
Translates to: NQNSTILALVCECVCVCVDDPFI*LWDLEG
Trigger: CCCCTCTAGATCCCACAACAAAATGAATGGGTCGTC...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AATCAAAACTCCACCATCCTGGCTCTTGTGTGTGAGTGTGTCTGTGTGTGTGTGCTCAAACTGGAAACGTaGGCTGCATTCCAGGCATGT +
Preference number: 5 (lower is better)
Translates to: NQNSTILALVCECVCVCVLKLET*AAFQAC
Trigger: ACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGAG...CACACACACACAGACACACTCACACACAAGAGCCAGGATGGTGGAGTTTTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTGGAGGGGGCCGGCTTaGCAAAACTTGGGACCCGGG +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPWRGPA*QNLGPG
Trigger: CCCGGGTCCCAAGTTTTGCAAAGCCGGCCCCCTCCA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATGCGAGAAGGCGCTTTaGCGCTCGTCCGACGCGGCG +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIECEKAL*RSSDAA
Trigger: CGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATGGAGGGGGCCGGCTTaGCAAAACTTGGGACCCGGG +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIEWRGPA*QNLGPG
Trigger: CCCGGGTCCCAAGTTTTGCAAAGCCGGCCCCCTCCA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATCCCTGGAAACTCAAATaGAATGGTGATCCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYPWKLK*NGDPFL
Trigger: TAAAAAGGGATCACCATTCAATTTGAGTTTCCAGGG...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp CTTTGTGCAGGGTTTCGGGGTGCAAGGAAGCGGTGGATGTTCTCGCGTGTTTATATCGAGTGTTTCCTTTaGCCTATTGTATCAGTGTAT +
Preference number: 5 (lower is better)
Translates to: LCAGFRGARKRWMFSRVYIECFL*PIVSVY
Trigger: ATACACTGATACAATAGGCAAAAGGAAACACTCGAT...ATAAACACGCGAGAACATCCACCGCTTCCTTGCACCCCGAAACCCTGCACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 90 bp GTAGACTTGAGAGCTATGAAAGCTATGCTGTCATATAGGGAAGTATaGCTCAGGACACAGGGACCAAATATAGCATTCTCAGGGATGTCG +
Preference number: 5 (lower is better)
Translates to: VDLRAMKAMLSYREV*LRTQGPNIAFSGMS
Trigger: CGACATCCCTGAGAATGCTATATTTGGTCCCTGTGTCCTGAGCCATACTTCCCTATATGACAGCATAGCTTTCATAGCTCTCAAGTCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS-3UTR CAA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACCGGCTTTGCAAAACTaGGGACCCGGGCCTAAAGGT +
Preference number: 5 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSPALQN*GPGPKG
Trigger: ACCTTTAGGCCCGGGTCCCAAGTTTTGCAAAGCCGG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCAGCTCCCTGGCCAGGTaGTGGAAGTCTGTGGATGGC +
Preference number: 5 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTSSLAR*WKSVDG
Trigger: GCCATCCACAGACTTCCACAACCTGGCCAGGGAGCT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTATGCGGAAGGAGGCATaGCACTTGGCGCACCAGTTC +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPMRKEA*HLAHQF
Trigger: GAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCAT...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTTGCAGATGGGGCACTaGAGTTTCTCCTCTCGCCGC +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPLQMGH*SFSSRR
Trigger: GCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCAA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCATTGCAGATGGGGCACTaGAGTTTCTCCTCTCGCCGC +
Preference number: 5 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSLQMGH*SFSSRR
Trigger: GCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCAA...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGCCGCCTTGTTCGTCTaGGGGACTTATATCAGCGCT +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPAALFV*GTYISA
Trigger: AGCGCTGATATAAGTCCCCAAGACGAACAAGGCGGC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACCACCATCCTGGCTCTaGTGTGTGAGTGTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSPPSWL*CVSVSV
Trigger: CACAGACACACTCACACACAAGAGCCAGGATGGTGG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCCATGTCAAGAGGTGTaGGTGTTGCCGCCTTTTAGG +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPPCQEV*VLPPFR
Trigger: CCTAAAAGGCGGCAACACCAACACCTCTTGACATGG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACATTGTTGGACAGCCTaGGCATCTCCATCCCAGATG +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQHCWTA*ASPSQM
Trigger: CATCTGGGATGGAGATGCCAAGGCTGTCCAACAATG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCACTTCTGAGGAACCATTaGCTGCTGAGGTGTCTACCC +
Preference number: 5 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSLLRNH*LLRCLP
Trigger: GGGTAGACACCTCAGCAGCAAATGGTTCCTCAGAAG...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACTTCTGAGGAACCATTaGCTGCTGAGGTGTCTACCC +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQLLRNH*LLRCLP
Trigger: GGGTAGACACCTCAGCAGCAAATGGTTCCTCAGAAG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAACTTATCTCTGGCCGATaGGACCAACCGCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIELISGR*DQPQPH
Trigger: ATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAAG...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTATCTCTGGCCGATaGGACCAACCGCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTLISGR*DQPQPH
Trigger: ATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAAG...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAGCCGCCTTGTTCGTCTaGGGGACTTATATCAGCGCT +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIEAALFV*GTYISA
Trigger: AGCGCTGATATAAGTCCCCAAGACGAACAAGGCGGC...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAATCCCTGAAGGACTCATaGCAGATGGGGCACTTGAGT +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQSLKDS*QMGHLS
Trigger: ACTCAAGTGCCCCATCTGCAATGAGTCCTTCAGGGA...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTGAGAAACGGAGAGAGTaGTACAGATGGACCCGATGC +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPEKRRE*YRWTRC
Trigger: GCATCGGGTCCATCTGTACAACTCTCTCCGTTTCTC...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415738.3
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATTAACAGCCTGCAAGTaGACTCCTTCAACGGGGCTG +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIELTACK*TPSTGL
Trigger: CAGCCCCGTTGAAGGAGTCAACTTGCAGGCTGTTAA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTATCTGTCAGACATTGTaGGACAGCCTTGGCATCTCC +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPICQTL*DSLGIS
Trigger: GGAGATGCCAAGGCTGTCCAACAATGTCTGACAGAT...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGACCCATTCATTTTGTaGTGGGATCTAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQDPFIL*WDLEGQ
Trigger: CTGCCCCTCTAGATCCCACAACAAAATGAATGGGTC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACTCAAACTGGAAACGTaGGCTGCATTCCAGGCATGT +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQLKLET*AAFQAC
Trigger: ACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGAG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCTCCCTGAAGGACTCATaGCAGATGGGGCACTTGAGT +
Preference number: 5 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTSLKDS*QMGHLS
Trigger: ACTCAAGTGCCCCATCTGCAATGAGTCCTTCAGGGA...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAGCTGATGCTAATGACTaGAGGTCTTTAACAGCCTGC +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQADAND*RSLTAC
Trigger: GCAGGCTGTTAAAGACCTCAAGTCATTAGCATCAGC...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CAA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCATCTGTCAGACATTGTaGGACAGCCTTGGCATCTCC +
Preference number: 5 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTICQTL*DSLGIS
Trigger: GGAGATGCCAAGGCTGTCCAACAATGTCTGACAGAT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAGACGACCCATTCATTTaGTTGTGGGATCTAGAGGGG +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIEDDPFI*LWDLEG
Trigger: CCCCTCTAGATCCCACAACAAAATGAATGGGTCGTC...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATCGCATACTCCTTTTaGTGGTGCGACCTCATATGG +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQIAYSF*WCDLIW
Trigger: CCATATGAGGTCGCACCACAAAAAGGAGTATGCGAT...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTAACTGTAGTGTTATTTaGGAAGAGTGGGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPNCSVI*EEWAGE
Trigger: CTCTCCAGCCCACTCTTCCAAAATAACACTACAGTT...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAATCGCATACTCCTTTTaGTGGTGCGACCTCATATGG +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIEIAYSF*WCDLIW
Trigger: CCATATGAGGTCGCACCACAAAAAGGAGTATGCGAT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAAAATATCTGTCAGACATaGTTGGACAGCCTTGGCATC +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIENICQT*LDSLGI
Trigger: GATGCCAAGGCTGTCCAACAATGTCTGACAGATATT...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCTCTTGTCAGTAGACTaGAGAGCTATGAAAGCTATG +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPLLSVD*RAMKAM
Trigger: CATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAG...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAATACGGTACTGTTCTCTaGTCAGTAGACTTGAGAGCT +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIEYGTVL*SVDLRA
Trigger: AGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTA...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTCAATTCTCTACTCCTaGTTCCACTTTAGCAAGGCT +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPSILYS*FHFSKA
Trigger: AGCCTTGCTAAAGTGGAACAAGGAGTAGAGAATTGA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTTTTGTTCTCTTGAACTaGCTGAGCGAAAAGATGCTT +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPFVLLN*LSEKML
Trigger: AAGCATCTTTTCGCTCAGCAAGTTCAAGAGAACAAA...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS-3UTR CAA 90 bp AAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAATTGAACTCTTGTCAGTAGACTaGAGAGCTATGAAAGCTATG +
Preference number: 5 (lower is better)
Translates to: KSIIISLYMHFPLETQIELLSVD*RAMKAM
Trigger: CATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAG...TTCAATTTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTCTTGTCAGTAGACTaGAGAGCTATGAAAGCTATG +
Preference number: 5 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTLLSVD*RAMKAM
Trigger: CATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAG...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAACCCTGGAAACTCAAATaGAATGGTGATCCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: SLKSIIISLYMHFPLETQPWKLK*NGDPFL
Trigger: TAAAAAGGGATCACCATTCAATTTGAGTTTCCAGGG...TTGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAGTTTCCTTTTGCCTATaGTATCAGTGTATTTCCATG +
Preference number: 5 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSVSFCL*YQCISM
Trigger: CATGGAAATACACTGATACAATAGGCAAAAGGAAAC...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCCTATCGAGTGTTTCCTTTaGCCTATTGTATCAGTGTAT +
Preference number: 5 (lower is better)
Translates to: YFCRNTNCHQEMQKASHPIECFL*PIVSVY
Trigger: ATACACTGATACAATAGGCAAAAGGAAACACTCGAT...AGGGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTCATTGAAGTCCATTATCATTTCATTATACATGCACTTCCCCCTGGAAACTCAAAATGTACCTTTGTTTaGGGGAAAGTGAAAATGCGT +
Preference number: 5 (lower is better)
Translates to: FIEVHYHFIIHALPPGNSKCTFV*GKVKMR
Trigger: ACGCATTTTCACTTTCCCCAAAACAAAGGTACATTT...TGAGTTTCCAGGGGGAAGTGCATGTATAATGAAATGATAATGGACTTCAATGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS-3UTR CAA 90 bp TTTATTTTTGTAGGAACACAAACTGTCATCAAGAAATGCAGAAAGCATCTCACCAACATATTTGTTCTCTaGAACTTGCTGAGCGAAAAG +
Preference number: 5 (lower is better)
Translates to: FIFVGTQTVIKKCRKHLTNIFVL*NLLSEK
Trigger: CTTTTCGCTCAGCAAGTTCAAGAGAACAAATATGTT...GGTGAGATGCTTTCTGCATTTCTTGATGACAGTTTGTGTTCCTACAAAAATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339711.8
CDS GCA 72 bp CCGCCCCCACCGCTGGTGCTGCCCGCGCTGCCCAGCTaGGGCACCGAAGTGAAGGCGCTGCCCCTCGCAGGA +
Preference number: 6 (lower is better)
Translates to: PPPPLVLPALPS*GTEVKALPLAG
Trigger: TCCTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCAGCGGTGGGGGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 72 bp GAGGCGACTCCCGCGCCGTCGGCTGTCCCCTCCTCCTaGAGGCTGGCCGCGCGGGCAGCCTTCTTCACCTCC +
Preference number: 6 (lower is better)
Translates to: EATPAPSAVPSS*RLAARAAFFTS
Trigger: GGAGGTGAAGAAGGCTGCCCGCGCGGCCAGCCTGCAGGAGGAGGGGACAGCCGACGGCGCGGGAGTCGCCTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp GAGTCTGGTGGGGCCCACGCCGTCGGCGGGGTGGCATaGCTCGAGCGCGCCCAGCTTCTGGCCCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: ESGGAHAVGGVA*LERAQLLAQHQ
Trigger: CTGGTGCTGGGCCAGAAGCTGGGCGCGCTCGAGCCATGCCACCCCGCCGACGGCGTGGGCCCCACCAGACTC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 72 bp CCGCTAGAGGGTCCGCGGCGGCGGGATAGAGTCTGGTaGGGCCCACGCCGTCGGCGGGGTGGCATGGCTCGA +
Preference number: 6 (lower is better)
Translates to: PLEGPRRRDRVW*GPRRRRGGMAR
Trigger: TCGAGCCATGCCACCCCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCGCCGCGGACCCTCTAGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 72 bp GCCTCGCGAAATGGCCCCGGTCTCTGCTGCAGCAGCTaGGAGGGAGGGAGCGACCGCCGGCTGCTGCCGGGC +
Preference number: 6 (lower is better)
Translates to: ASRNGPGLCCSS*EGGSDRRLLPG
Trigger: GCCCGGCAGCAGCCGGCGGTCGCTCCCTCCCTCCCAGCTGCTGCAGCAGAGACCGGGGCCATTTCGCGAGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508965.5
ENST00000509375.5
CDS CAA 90 bp GGGGACAGCTGCGAGAAAGAGCGTGCTGGCTGCGAGAAGGCGCTTTaGCGCTCGTCCGACGCGGCGCCCTGGCCCCCGCCCGCGCCGCCT +
Preference number: 6 (lower is better)
Translates to: GDSCEKERAGCEKAL*RSSDAAPWPPPAPP
Trigger: AGGCGGCGCGGGCGGGGGCCAGGGCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAGCTGTCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS TCA 72 bp TGGTGCTGCCCGCGCTGCCCAGCTGCGGCACCGAAGTaGAGGCGCTGCCCCTCGCAGGACTGCCGCCCTCGA +
Preference number: 6 (lower is better)
Translates to: WCCPRCPAAAPK*RRCPSQDCRPR
Trigger: TCGAGGGCGGCAGTCCTGCGAGGGGCAGCGCCTTCACTTCGGTGCCGCAGCTGGGCAGCGCGGGCAGCACCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 72 bp CCGCGCGGGCAGCCTTCTTCACCTCCACGAAGGCGCTaGGCTTCGCCTCGCCCGTCTCGGGACTTGGCGGCG +
Preference number: 6 (lower is better)
Translates to: PRGQPSSPPRRR*ASPRPSRDLAA
Trigger: CGCCGCCAAGTCCCGAGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGGTGAAGAAGGCTGCCCGCGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 72 bp GCGAGAAAGAGCGTGCTGGCTGCGAGAAGGCGCTTTTaGGCTCGTCCGACGCGGCGCCCTGGCCCCCGCCCG +
Preference number: 6 (lower is better)
Translates to: ARKSVLAARRRF*ARPTRRPGPRP
Trigger: CGGGCGGGGGCCAGGGCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 72 bp TCACCGCTAGAGGGTCCGCGGCGGCGGGATAGAGTCTaGTGGGGCCCACGCCGTCGGCGGGGTGGCATGGCT +
Preference number: 6 (lower is better)
Translates to: SPLEGPRRRDRV*WGPRRRRGGMA
Trigger: AGCCATGCCACCCCGCCGACGGCGTGGGCCCCACCAGACTCTATCCCGCCGCCGCGGACCCTCTAGCGGTGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 72 bp AGGGACCCGCAACCTCCGTTCAGGTCCGCGGCCCCCTaGAGCTTCACCGCTAGAGGGTCCGCGGCGGCGGGA +
Preference number: 6 (lower is better)
Translates to: RDPQPPFRSAAP*SFTARGSAAAG
Trigger: TCCCGCCGCCGCGGACCCTCTAGCGGTGAAGCTCCAGGGGGCCGCGGACCTGAACGGAGGTTGCGGGTCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CAA 90 bp CCACCGCCGCCCTCCGCCGCCTCCTCCGGGAATTTCCTCTTTCCTTaGCCGCCGCCCGTGGCGATGCCGTCGGGACTCAGCTCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: PPPPSAASSGNFLFP*PPPVAMPSGLSSAS
Trigger: GGAGGCGGAGCTGAGTCCCGACGGCATCGCCACGGGCGGCGGCAAAGGAAAGAGGAAATTCCCGGAGGAGGCGGCGGAGGGCGGCGGTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 72 bp TTGGGCCAGAAGGCGGTGGCGTACAGGAAGGGGCTCTaGTTAGGCAGGCCGCCGCCGCCGCTCGGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: LGQKAVAYRKGL*LGRPPPPLGRD
Trigger: GTCCCTGCCGAGCGGCGGCGGCGGCCTGCCTAAGCAGAGCCCCTTCCTGTACGCCACCGCCTTCTGGCCCAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 72 bp GCCGCCGCTGCCGCTACCGCTGCTGAGGCTCTGGGCTaGGGAGCAGCTGCTGCCTCCCCGGGAGTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: AAAAATAAEALG*GAAAASPGVFQ
Trigger: CTGGAAAACTCCCGGGGAGGCAGCAGCTGCTCCCCAGCCCAGAGCCTCAGCAGCGGTAGCGGCAGCGGCGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp GAAGGCGCTGCGCTTCGCCTCGCCCGTCTCGGGACTTaGCGGCGCGAAGAGGCGGCCGTTCTCTTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: EGAALRLARLGT*RREEAAVLFQA
Trigger: GGCCTGGAAGAGAACGGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCGAGGCGAAGCGCAGCGCCTTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp TCGGAGCCTGCCGAGGAGCCCGTCCGCCTCGCGAAATaGCCCCGGTCTCTGCTGCAGCAGCTGGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: SEPAEEPVRLAK*PRSLLQQLGGR
Trigger: CCTCCCTCCCAGCTGCTGCAGCAGAGACCGGGGCCATTTCGCGAGGCGGACGGGCTCCTCGGCAGGCTCCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000508965.5
ENST00000509375.5
CDS CAA 72 bp CGAAGGCGCTGCGCTTCGCCTCGCCCGTCTCGGGACTaGGCGGCGCGAAGAGGCGGCCGTTCTCTTCCAGGC +
Preference number: 6 (lower is better)
Translates to: RRRCASPRPSRD*AARRGGRSLPG
Trigger: GCCTGGAAGAGAACGGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCGAGGCGAAGCGCAGCGCCTTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 72 bp TGCGAGAAAGAGCGTGCTGGCTGCGAGAAGGCGCTTTaGCGCTCGTCCGACGCGGCGCCCTGGCCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: CEKERAGCEKAL*RSSDAAPWPPP
Trigger: GGGCGGGGGCCAGGGCGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 72 bp GCTTCGCGCTGCTGCCGCCGGCGGCAGCGGATGGGTTaGTGCTTTCCGGGGAGGGGGATGGGTAGTGGTGGA +
Preference number: 6 (lower is better)
Translates to: ASRCCRRRQRMG*CFPGRGMGSGG
Trigger: TCCACCACTACCCATCCCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp GGATGGCTTCGCGCTGCTGCCGCCGGCGGCAGCGGATaGGTTGCTGCTTTCCGGGGAGGGGGATGGGTAGTG +
Preference number: 6 (lower is better)
Translates to: GWLRAAAAGGSG*VAAFRGGGWVV
Trigger: CACTACCCATCCCCCTCCCCGGAAAGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 90 bp TCACCTCCACGAAGGCGCTGCGCTTCGCCTCGCCCGTCTCGGGACTaGGCGGCGCGAAGAGGCGGCCGTTCTCTTCCAGGCCGAAGTAGC +
Preference number: 6 (lower is better)
Translates to: SPPRRRCASPRPSRD*AARRGGRSLPGRSS
Trigger: GCTACTTCGGCCTGGAAGAGAACGGCCGCCTCTTCGCGCCGCCAAGTCCCGAGACGGGCGAGGCGAAGCGCAGCGCCTTCGTGGAGGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp CTCGGTACTGCTGCGGTGTGCACACCAGATCCTCCTTaGAGGCCGGGAGGGGCCGCTCTACGAAGCGGCCCC +
Preference number: 6 (lower is better)
Translates to: LGTAAVCTPDPP*RPGGAALRSGP
Trigger: GGGGCCGCTTCGTAGAGCGGCCCCTCCCGGCCTCCAAGGAGGATCTGGTGTGCACACCGCAGCAGTACCGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 72 bp ACCAGCGGGGACAGCTGCGAGAAAGAGCGTGCTGGCTaGGAGAAGGCGCTTTTGCGCTCGTCCGACGCGGCG +
Preference number: 6 (lower is better)
Translates to: TSGDSCEKERAG*EKALLRSSDAA
Trigger: CGCCGCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAGCTGTCCCCGCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 72 bp TTCCAGCTCCCTGGCCAGGTTGTGGAAGTCTGTGGATaGCTTCGCGCTGCTGCCGCCGGCGGCAGCGGATGG +
Preference number: 6 (lower is better)
Translates to: FQLPGQVVEVCG*LRAAAAGGSGW
Trigger: CCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGGCCAGGGAGCTGGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 72 bp GACAGAGAGCTGGACACCCAGCGCGTGCGGACCCCGTaGGTATTTCCCCGGAGTCCGCGTTCCGTGAAAGGG +
Preference number: 6 (lower is better)
Translates to: DRELDTQRVRTP*VFPRSPRSVKG
Trigger: CCCTTTCACGGAACGCGGACTCCGGGGAAATACGCACGGGGTCCGCACGCGCTGGGTGTCCAGCTCTCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000511825.5
ENST00000515013.5
CDS GCA 72 bp CCAGGTTGTGGAAGTCTGTGGATGGCTTCGCGCTGCTaGCGCCGGCGGCAGCGGATGGGTTGCTGCTTTCCG +
Preference number: 6 (lower is better)
Translates to: PGCGSLWMASRC*RRRQRMGCCFP
Trigger: CGGAAAGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp AGTTTTCCAGCTCCCTGGCCAGGTTGTGGAAGTCTGTaGATGGCTTCGCGCTGCTGCCGCCGGCGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: SFPAPWPGCGSL*MASRCCRRRQR
Trigger: CCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGGCCAGGGAGCTGGAAAACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp CAGCACCAGCGGGGACAGCTGCGAGAAAGAGCGTGCTaGCTGCGAGAAGGCGCTTTTGCGCTCGTCCGACGC +
Preference number: 6 (lower is better)
Translates to: QHQRGQLRERAC*LREGAFALVRR
Trigger: GCGTCGGACGAGCGCAAAAGCGCCTTCTCGCAGCCAGCACGCTCTTTCTCGCAGCTGTCCCCGCTGGTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 72 bp GGAGAAGCTGTGACAGAGAGCTGGACACCCAGCGCGTaGGGACCCCGTGCGTATTTCCCCGGAGTCCGCGTT +
Preference number: 6 (lower is better)
Translates to: GEAVTESWTPSA*GPRAYFPGVRV
Trigger: AACGCGGACTCCGGGGAAATACGCACGGGGTCCGCACGCGCTGGGTGTCCAGCTCTCTGTCACAGCTTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000511825.5
ENST00000515013.5
CDS GCA 72 bp TGGCCAGGTTGTGGAAGTCTGTGGATGGCTTCGCGCTaGTGCCGCCGGCGGCAGCGGATGGGTTGCTGCTTT +
Preference number: 6 (lower is better)
Translates to: WPGCGSLWMASR*CRRRQRMGCCF
Trigger: AAAGCAGCAACCCATCCGCTGCCGCCGGCGGCAGCAGCGCGAAGCCATCCACAGACTTCCACAACCTGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 72 bp ATGCGGAAGGAGGCATTGCACTTGGCGCACCAGTTCTaGGCGGGCAGACACAGCGAGGTGAAGGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: MRKEALHLAHQF*AGRHSEVKEGG
Trigger: GCCGCCCTCCTTCACCTCGCTGTGTCTGCCCGCGCAGAACTGGTGCGCCAAGTGCAATGCCTCCTTCCGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CAA 72 bp GCCGCCCCCGTGGTCCTTGGTGCCCACGCCGCCGCCTaGTTCGTCTTGGGGACTTATATCAGCGCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: AAPVVLGAHAAA*FVLGTYISAVK
Trigger: CTTCACAGCGCTGATATAAGTCCCCAAGACGAACAAGGCGGCGGCGTGGGCACCAAGGACCACGGGGGCGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 72 bp GGGATGGAGTTGCCGAGGCCGTCTCGGGAGCCTCGTTaGTGCGCTAAGCCACTTAGAGGCGCTGACTTGCCC +
Preference number: 6 (lower is better)
Translates to: GMELPRPSREPR*CAKPLRGADLP
Trigger: GGGCAAGTCAGCGCCTCTAAGTGGCTTAGCGCACAAACGAGGCTCCCGAGACGGCCTCGGCAACTCCATCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 90 bp CGGAAAGCTTTTCACATCCAGCGGGTGGTGGAGGAGGGGATGGAGTaGCCGAGGCCGTCTCGGGAGCCTCGTTTGTGCGCTAAGCCACTT +
Preference number: 6 (lower is better)
Translates to: RKAFHIQRVVEEGME*PRPSREPRLCAKPL
Trigger: AAGTGGCTTAGCGCACAAACGAGGCTCCCGAGACGGCCTCGGCAACTCCATCCCCTCCTCCACCACCCGCTGGATGTGAAAAGCTTTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS GCA 72 bp ATGGAGTTGCCGAGGCCGTCTCGGGAGCCTCGTTTGTaGGCTAAGCCACTTAGAGGCGCTGACTTGCCCCTT +
Preference number: 6 (lower is better)
Translates to: MELPRPSREPRL*AKPLRGADLPL
Trigger: AAGGGGCAAGTCAGCGCCTCTAAGTGGCTTAGCGCACAAACGAGGCTCCCGAGACGGCCTCGGCAACTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CCA 72 bp AAGATGGGCTCCGGAAAGCTTTTCACATCCAGCGGGTaGTGGAGGAGGGGATGGAGTTGCCGAGGCCGTCTC +
Preference number: 6 (lower is better)
Translates to: KMGSGKLFTSSG*WRRGWSCRGRL
Trigger: GAGACGGCCTCGGCAACTCCATCCCCTCCTCCACCACCCGCTGGATGTGAAAAGCTTTCCGGAGCCCATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000508061.6
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 72 bp TGGCGCTCCCTGAAGGACTCATTGCAGATGGGGCACTaGAGTTTCTCCTCTCGCCGCCGCTTCACCAAGGGC +
Preference number: 6 (lower is better)
Translates to: WRSLKDSLQMGH*SFSSRRRFTKG
Trigger: GCCCTTGGTGAAGCGGCGGCGAGAGGAGAAACTCAAGTGCCCCATCTGCAATGAGTCCTTCAGGGAGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 72 bp CTAGCCCTGGAGCCACCGCTGATTTGCGCAGCTAGTTaGCTGGGGGTGATAAACGGGCGTCGTCTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LALEPPLICAAS*LGVINGRRLSS
Trigger: TGAAGAGAGACGACGCCCGTTTATCACCCCCAGGCAACTAGCTGCGCAAATCAGCGGTGGCTCCAGGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS GCA 72 bp TCCAGGGATTCTCTAGCCCTGGAGCCACCGCTGATTTaGGCAGCTAGTTGCCTGGGGGTGATAAACGGGCGT +
Preference number: 6 (lower is better)
Translates to: SRDSLALEPPLI*AASCLGVINGR
Trigger: ACGCCCGTTTATCACCCCCAGGCAACTAGCTGCGCAAATCAGCGGTGGCTCCAGGGCTAGAGAATCCCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 72 bp GTGGTCCTTGGTGCCCACGCCGCCGCCTTGTTCGTCTaGGGGACTTATATCAGCGCTGTGAAGTCTCTTGGG +
Preference number: 6 (lower is better)
Translates to: VVLGAHAAALFV*GTYISAVKSLG
Trigger: CCCAAGAGACTTCACAGCGCTGATATAAGTCCCCAAGACGAACAAGGCGGCGGCGTGGGCACCAAGGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS TCA 72 bp CCGCCTTGTTCGTCTTGGGGACTTATATCAGCGCTGTaGAGTCTCTTGGGGCAGCGGAAACGCAGATGCGCC +
Preference number: 6 (lower is better)
Translates to: PPCSSWGLISAL*SLLGQRKRRCA
Trigger: GGCGCATCTGCGTTTCCGCTGCCCCAAGAGACTTCACAGCGCTGATATAAGTCCCCAAGACGAACAAGGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 72 bp TCGCGTGTTTATTCCTGCAGGTGGCTTAACTGTGCTTaGGCGCGCGTGGAAAGCTGGGGTCCTTTCCGAGTC +
Preference number: 6 (lower is better)
Translates to: SRVYSCRWLNCA*ARVESWGPFRV
Trigger: GACTCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAATAAACACGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS GCA 72 bp ATGACTTCAACCTCTGAGAGCTGCCATTCTCAGGGCTaGTTTCGCGAGCACCCAGGGAGGCACCGCTTTCCA +
Preference number: 6 (lower is better)
Translates to: MTSTSESCHSQG*FREHPGRHRFP
Trigger: TGGAAAGCGGTGCCTCCCTGGGTGCTCGCGAAAGCAGCCCTGAGAATGGCAGCTCTCAGAGGTTGAAGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508061.6
CDS CCA 72 bp GATTGGAGAGGGCCTTTCCCCGTTTCACTAGGCACTTaGAGAAGCTGTGACAGAGAGCTGGACACCCAGCGC +
Preference number: 6 (lower is better)
Translates to: DWRGPFPVSLGT*RSCDRELDTQR
Trigger: GCGCTGGGTGTCCAGCTCTCTGTCACAGCTTCTCCAAGTGCCTAGTGAAACGGGGAAAGGCCCTCTCCAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp CGTCTTGGGGACTTATATCAGCGCTGTGAAGTCTCTTaGGGCAGCGGAAACGCAGATGCGCCACATAGGGGA +
Preference number: 6 (lower is better)
Translates to: RLGDLYQRCEVS*GSGNADAPHRG
Trigger: TCCCCTATGTGGCGCATCTGCGTTTCCGCTGCCCCAAGAGACTTCACAGCGCTGATATAAGTCCCCAAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp AGGTGGCTTAACTGTGCTTGCGCGCGCGTGGAAAGCTaGGGTCCTTTCCGAGTCAATTATGCGAGGTCATGT +
Preference number: 6 (lower is better)
Translates to: RWLNCACARVES*GPFRVNYARSC
Trigger: ACATGACCTCGCATAATTGACTCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CCA 72 bp ATTCCTGCAGGTGGCTTAACTGTGCTTGCGCGCGCGTaGAAAGCTGGGGTCCTTTCCGAGTCAATTATGCGA +
Preference number: 6 (lower is better)
Translates to: IPAGGLTVLARA*KAGVLSESIMR
Trigger: TCGCATAATTGACTCGGAAAGGACCCCAGCTTTCCACGCGCGCGCAAGCACAGTTAAGCCACCTGCAGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
CDS CAA 72 bp CAGATGCGCCACATAGGGGAACTCAAACTGGAAACGTaGGCTGCATTCCAGGCATGTGTAAGGGGACGACCC +
Preference number: 6 (lower is better)
Translates to: QMRHIGELKLET*AAFQACVRGRP
Trigger: GGGTCGTCCCCTTACACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGAGTTCCCCTATGTGGCGCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 72 bp GCGCCACATAGGGGAACTCAAACTGGAAACGTTGGCTaGATTCCAGGCATGTGTAAGGGGACGACCCATTCA +
Preference number: 6 (lower is better)
Translates to: APHRGTQTGNVG*IPGMCKGTTHS
Trigger: TGAATGGGTCGTCCCCTTACACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGAGTTCCCCTATGTGGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp TGGACAGCCTTGGCATCTCCATCCCAGATGCCTCGCTaGATGCCAGTATCCTCCATCACAGGAATAAGGTCA +
Preference number: 6 (lower is better)
Translates to: WTALASPSQMPR*MPVSSITGIRS
Trigger: TGACCTTATTCCTGTGATGGAGGATACTGGCATCCAGCGAGGCATCTGGGATGGAGATGCCAAGGCTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 90 bp GCAGCAGCTGATGCTAATGACTTGAGGTCTTTAACAGCCTGCAAGTaGACTCCTTCAACGGGGCTGCAACACCACGTCGCTGGGGAATCT +
Preference number: 6 (lower is better)
Translates to: AAADANDLRSLTACK*TPSTGLQHHVAGES
Trigger: AGATTCCCCAGCGACGTGGTGTTGCAGCCCCGTTGAAGGAGTCAACTTGCAGGCTGTTAAAGACCTCAAGTCATTAGCATCAGCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000507025.1
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 90 bp GAGGCGCTGACTTGCCCCTTTAGTGCAGCAGCTGATGCTAATGACTaGAGGTCTTTAACAGCCTGCAAGTTGACTCCTTCAACGGGGCTG +
Preference number: 6 (lower is better)
Translates to: EALTCPFSAAADAND*RSLTACKLTPSTGL
Trigger: CAGCCCCGTTGAAGGAGTCAACTTGCAGGCTGTTAAAGACCTCAAGTCATTAGCATCAGCTGCTGCACTAAAGGGGCAAGTCAGCGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 90 bp TATTTCGCTAATGAGTTGCGGGTCTCCTCAGTTTCCCTTCTGTCCTaGCACATTCCTCTAGCGAGGCCCCCAATCAAACAGTCGCCGTGC +
Preference number: 6 (lower is better)
Translates to: YFANELRVSSVSLLS*HIPLARPPIKQSPC
Trigger: GCACGGCGACTGTTTGATTGGGGGCCTCGCTAGAGGAATGTGCAAGGACAGAAGGGAAACTGAGGAGACCCGCAACTCATTAGCGAAATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508061.6
CDS GCA 72 bp CTCGTTTGTGCGCTAAGCCACTTAGAGGCGCTGACTTaGCCCTTTAGTGCAGCAGCTGATGCTAATGACTTG +
Preference number: 6 (lower is better)
Translates to: LVCALSHLEALT*PFSAAADANDL
Trigger: CAAGTCATTAGCATCAGCTGCTGCACTAAAGGGGCAAGTCAGCGCCTCTAAGTGGCTTAGCGCACAAACGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CCA 72 bp GTTGACTCCTTCAACGGGGCTGCAACACCACGTCGCTaGGGAATCTCGGGCTTCTTTTTCACAGTTCAATTC +
Preference number: 6 (lower is better)
Translates to: VDSFNGAATPRR*GISGFFFTVQF
Trigger: GAATTGAACTGTGAAAAAGAAGCCCGAGATTCCCCAGCGACGTGGTGTTGCAGCCCCGTTGAAGGAGTCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000507025.1
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CCA 72 bp GCTTCAAGGTTCTGCTCTTCCTTATCTCTGGCCGATTaGACCAACCGCAGCCACATGAGACCTTCTGAGGAA +
Preference number: 6 (lower is better)
Translates to: ASRFCSSLSLAD*TNRSHMRPSEE
Trigger: TTCCTCAGAAGGTCTCATGTGGCTGCGGTTGGTCCAATCGGCCAGAGATAAGGAAGAGCAGAACCTTGAAGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 72 bp AATGAGTTGCGGGTCTCCTCAGTTTCCCTTCTGTCCTaGCACATTCCTCTAGCGAGGCCCCCAATCAAACAG +
Preference number: 6 (lower is better)
Translates to: NELRVSSVSLLS*HIPLARPPIKQ
Trigger: CTGTTTGATTGGGGGCCTCGCTAGAGGAATGTGCAAGGACAGAAGGGAAACTGAGGAGACCCGCAACTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508061.6
CDS CAA 90 bp GTCGCAGGTGGTGTAAACGCTGGTAAAAATATCTGTCAGACATTGTaGGACAGCCTTGGCATCTCCATCCCAGATGCCTCGCTGGATGCC +
Preference number: 6 (lower is better)
Translates to: VAGGVNAGKNICQTL*DSLGISIPDASLDA
Trigger: GGCATCCAGCGAGGCATCTGGGATGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGATATTTTTACCAGCGTTTACACCACCTGCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 90 bp GCGGAAACGCAGATGCGCCACATAGGGGAACTCAAACTGGAAACGTaGGCTGCATTCCAGGCATGTGTAAGGGGACGACCCATTCATTTT +
Preference number: 6 (lower is better)
Translates to: AETQMRHIGELKLET*AAFQACVRGRPIHF
Trigger: AAAATGAATGGGTCGTCCCCTTACACATGCCTGGAATGCAGCCAACGTTTCCAGTTTGAGTTCCCCTATGTGGCGCATCTGCGTTTCCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS GCA 72 bp GCAGCTGATGCTAATGACTTGAGGTCTTTAACAGCCTaGAAGTTGACTCCTTCAACGGGGCTGCAACACCAC +
Preference number: 6 (lower is better)
Translates to: AADANDLRSLTA*KLTPSTGLQHH
Trigger: GTGGTGTTGCAGCCCCGTTGAAGGAGTCAACTTGCAGGCTGTTAAAGACCTCAAGTCATTAGCATCAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000507025.1
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 72 bp GATGCTAATGACTTGAGGTCTTTAACAGCCTGCAAGTaGACTCCTTCAACGGGGCTGCAACACCACGTCGCT +
Preference number: 6 (lower is better)
Translates to: DANDLRSLTACK*TPSTGLQHHVA
Trigger: AGCGACGTGGTGTTGCAGCCCCGTTGAAGGAGTCAACTTGCAGGCTGTTAAAGACCTCAAGTCATTAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000507025.1
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 90 bp GATGTCGCAGGTGGTGTAAACGCTGGTAAAAATATCTGTCAGACATaGTTGGACAGCCTTGGCATCTCCATCCCAGATGCCTCGCTGGAT +
Preference number: 6 (lower is better)
Translates to: DVAGGVNAGKNICQT*LDSLGISIPDASLD
Trigger: ATCCAGCGAGGCATCTGGGATGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGATATTTTTACCAGCGTTTACACCACCTGCGACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 72 bp CTGGTAAAAATATCTGTCAGACATTGTTGGACAGCCTaGGCATCTCCATCCCAGATGCCTCGCTGGATGCCA +
Preference number: 6 (lower is better)
Translates to: LVKISVRHCWTA*ASPSQMPRWMP
Trigger: TGGCATCCAGCGAGGCATCTGGGATGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGATATTTTTACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS TCA 72 bp TCTCTACTCCATGTTAGTTTGATCCTCTCCCAGCTTTaGGACCCTTCTCTGGAACTCAGTGGGGTATTGAGG +
Preference number: 6 (lower is better)
Translates to: SLLHVSLILSQL*DPSLELSGVLR
Trigger: CCTCAATACCCCACTGAGTTCCAGAGAAGGGTCTCAAAGCTGGGAGAGGATCAAACTAACATGGAGTAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000506547.5
ENST00000507025.1
ENST00000515013.5
CDS TCA 72 bp AAGAGGTGTTGGTGTTGCCGCCTTTTAGGCTCTTCCTaGAGAGATAAGAGAGAGATGGAGAGATGGGGAGAA +
Preference number: 6 (lower is better)
Translates to: KRCWCCRLLGSS*RDKREMERWGE
Trigger: TTCTCCCCATCTCTCCATCTCTCTCTTATCTCTTCAGGAAGAGCCTAAAAGGCGGCAACACCAACACCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000415738.3
CDS CAA 72 bp GGTGTAAACGCTGGTAAAAATATCTGTCAGACATTGTaGGACAGCCTTGGCATCTCCATCCCAGATGCCTCG +
Preference number: 6 (lower is better)
Translates to: GVNAGKNICQTL*DSLGISIPDAS
Trigger: CGAGGCATCTGGGATGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGATATTTTTACCAGCGTTTACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 72 bp GGTGGTGTAAACGCTGGTAAAAATATCTGTCAGACATaGTTGGACAGCCTTGGCATCTCCATCCCAGATGCC +
Preference number: 6 (lower is better)
Translates to: GGVNAGKNICQT*LDSLGISIPDA
Trigger: GGCATCTGGGATGGAGATGCCAAGGCTGTCCAACAATGTCTGACAGATATTTTTACCAGCGTTTACACCACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 72 bp AATGAGTTGCGGGTCTCCTCAGTTTCCCTTCTGTCCTaGCACATTCCTCTAGCGAGGCTTTTTGTGAAATTG +
Preference number: 6 (lower is better)
Translates to: NELRVSSVSLLS*HIPLARLFVKL
Trigger: CAATTTCACAAAAAGCCTCGCTAGAGGAATGTGCAAGGACAGAAGGGAAACTGAGGAGACCCGCAACTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339711.8
ENST00000515013.5
CDS CAA 72 bp ACTTGCCCCTTTAGTGCAGCAGCTGATGCTAATGACTaGAGGTCTTTAACAGCCTGCAAGTTGACTCCTTCA +
Preference number: 6 (lower is better)
Translates to: TCPFSAAADAND*RSLTACKLTPS
Trigger: TGAAGGAGTCAACTTGCAGGCTGTTAAAGACCTCAAGTCATTAGCATCAGCTGCTGCACTAAAGGGGCAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000507025.1
ENST00000508061.6
ENST00000508965.5
ENST00000509375.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 72 bp GCCTATTGTATCAGTGTATTTCCATGTCAAGAGGTGTaGGTGTTGCCGCCTTTTAGGCTCTTCCTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: AYCISVFPCQEV*VLPPFRLFLKR
Trigger: TCTCTTCAGGAAGAGCCTAAAAGGCGGCAACACCAACACCTCTTGACATGGAAATACACTGATACAATAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415738.3
CDS CAA 90 bp TGGAGTCCTGGCAAAAATACACATGTAGGAAACTGTAGTGTTATTTaGGAAGAGTGGGCTGGAGAGAGGTTGATAAATGACACCCCAGGT +
Preference number: 6 (lower is better)
Translates to: WSPGKNTHVGNCSVI*EEWAGERLINDTPG
Trigger: ACCTGGGGTGTCATTTATCAACCTCTCTCCAGCCCACTCTTCCAAAATAACACTACAGTTTCCTACATGTGTATTTTTGCCAGGACTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000506547.5
ENST00000507025.1
ENST00000508061.6
ENST00000508965.5
ENST00000511825.5
ENST00000515013.5
CDS CAA 72 bp ACCTGGAACCGGGAAGATGCAATCGAGTGTTTCCTTTaGCCTATTGTATCAGTGTATTTCCATGTCAAGAGG +
Preference number: 6 (lower is better)
Translates to: TWNREDAIECFL*PIVSVYFHVKR
Trigger: CCTCTTGACATGGAAATACACTGATACAATAGGCAAAAGGAAACACTCGATTGCATCTTCCCGGTTCCAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 72 bp GAGGTGTCTACCCGAAAGATATACGGTACTGTTCTCTaGTCAGTAGACTTGAGAGCTATGAAAGCTATGCTG +
Preference number: 6 (lower is better)
Translates to: EVSTRKIYGTVL*SVDLRAMKAML
Trigger: CAGCATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTATATCTTTCGGGTAGACACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 90 bp GTGTCTACCCGAAAGATATACGGTACTGTTCTCTTGTCAGTAGACTaGAGAGCTATGAAAGCTATGCTGTCATATAGGGAAGTATGGCTC +
Preference number: 6 (lower is better)
Translates to: VSTRKIYGTVLLSVD*RAMKAMLSYREVWL
Trigger: GAGCCATACTTCCCTATATGACAGCATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTATATCTTTCGGGTAGACAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 90 bp TTTGCTGCTGAGGTGTCTACCCGAAAGATATACGGTACTGTTCTCTaGTCAGTAGACTTGAGAGCTATGAAAGCTATGCTGTCATATAGG +
Preference number: 6 (lower is better)
Translates to: FAAEVSTRKIYGTVL*SVDLRAMKAMLSYR
Trigger: CCTATATGACAGCATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTATATCTTTCGGGTAGACACCTCAGCAGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp AGAGCTATGAAAGCTATGCTGTCATATAGGGAAGTATaGCTCAGGACACAGGGACCAAATATAGCATTCTCA +
Preference number: 6 (lower is better)
Translates to: RAMKAMLSYREV*LRTQGPNIAFS
Trigger: TGAGAATGCTATATTTGGTCCCTGTGTCCTGAGCCATACTTCCCTATATGACAGCATAGCTTTCATAGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5
CDS CAA 72 bp GCAAGAATAGGCAAGGATTGTAACATATTTGTTCTCTaGAACTTGCTGAGCGAAAAGATGCTTCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ARIGKDCNIFVL*NLLSEKMLPRL
Trigger: CAGCCTGGGAAGCATCTTTTCGCTCAGCAAGTTCAAGAGAACAAATATGTTACAATCCTTGCCTATTCTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339711.8
ENST00000507025.1
ENST00000508061.6
ENST00000508965.5
ENST00000515013.5
CDS CAA 72 bp GCCTATTGTATCAGTGTATTTCCATGTCAAGAGGTGTaGGTGTTGCCGCCTTTTAGGCTCTTCCAAAATGAT +
Preference number: 6 (lower is better)
Translates to: AYCISVFPCQEV*VLPPFRLFQND
Trigger: ATCATTTTGGAAGAGCCTAAAAGGCGGCAACACCAACACCTCTTGACATGGAAATACACTGATACAATAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339711.8
ENST00000504452.5
ENST00000515013.5
CDS CCA 72 bp ATTCTCTACTCCTTGTTCCACTTTAGCAAGGCTCTTTaGAGTCCTGGCAAAAATACACATGTAGGAAACTGT +
Preference number: 6 (lower is better)
Translates to: ILYSLFHFSKAL*SPGKNTHVGNC
Trigger: ACAGTTTCCTACATGTGTATTTTTGCCAGGACTCCAAAGAGCCTTGCTAAAGTGGAACAAGGAGTAGAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000504452.5
ENST00000508061.6
ENST00000508965.5
ENST00000511825.5
CDS CAA 72 bp CGAAAGATATACGGTACTGTTCTCTTGTCAGTAGACTaGAGAGCTATGAAAGCTATGCTGTCATATAGGGAA +
Preference number: 6 (lower is better)
Translates to: RKIYGTVLLSVD*RAMKAMLSYRE
Trigger: TTCCCTATATGACAGCATAGCTTTCATAGCTCTCAAGTCTACTGACAAGAGAACAGTACCGTATATCTTTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339711.8
ENST00000415738.3
ENST00000504452.5
ENST00000515013.5