Pregenerated sensors for PRDM7 (Homo sapiens)
Ensembl gene IDs: ENSG00000126856Ensembl transcript IDs: ENST00000449207.8, ENST00000569206.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCTTaGTTTCAGGTCTGGTTCCTAGGCGCCAGGCTACCTGCCTTTAGT | + |
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Preference number: 1 (lower is better) Translates to: GLGQAGPGLVSGLVP*FQVWFLGARLPAFS Trigger: ACTAAAGGCAGGTAGCCTGGCGCCTAGGAACCAGACCTGAAACCAAGGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR CCA 90 bp | GCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTTCAGGTCTaGTTCCTAGGCGCCAGGCTACCTGCCTTTAGTTTTGCTTCTTTT | + |
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Preference number: 1 (lower is better) Translates to: AGPGLVSGLVPWFQV*FLGARLPAFSFASF Trigger: AAAAGAAGCAAAACTAAAGGCAGGTAGCCTGGCGCCTAGGAACCAGACCTGAAACCAAGGAACCAGACCCGAAACCAGGCCTGGGCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR CCA 90 bp | AAGCAGGGGGTAGGTGACAGGGGCTGCATGCACCGATGGTCAGAGTaGAACAGAACAGACCGGGAAGTTTCACAATGTCTTTCTATAATC | + |
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Preference number: 1 (lower is better) Translates to: KQGVGDRGCMHRWSE*NRTDREVSQCLSII Trigger: GATTATAGAAAGACATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAGCCCCTGTCACCTACCCCCTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR GCA 90 bp | GCATCAGCAAGACTGCTGTCTCAAGAGCCGAGCTCCCCGAGTGAGCAATTCCTGGTGACAGGGGCTGCATaGACCGATGGTCAGAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: ASARLLSQEPSSPSEQFLVTGAA*TDGQSG Trigger: TCCACTCTGACCATCGGTGCATGCAGCCCCTGTCAC...CAGGAATTGCTCACTCGGGGAGCTCGGCTCTTGAGACAGCAGTCTTGCTGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTTCAGGTCTGGTTCCTAGGCGCAGCTCTCTTTCCTGCTaGGACTCTGTAAAACCCTAC | + |
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Preference number: 2 (lower is better) Translates to: PRPGFGSGSLVSGLVPRRSSLSC*DSVKPY Trigger: GTAGGGTTTTACAGAGTCGCAGCAGGAAAGAGAGCT...GCGCCTAGGAACCAGACCTGAAACCAAGGAACCAGACCCGAAACCAGGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCAGCAAGACTGCTGTCTCAAGAGCCGAGCTCCCCGAGTGAGCAATTCCTGATGCGTGTTCCTGTCTaGCGTTCACTTCTGGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: ASARLLSQEPSSPSEQFLMRVPV*RSLLGL Trigger: TAGCCCCAGAAGTGAACGCCAGACAGGAACACGCAT...CAGGAATTGCTCACTCGGGGAGCTCGGCTCTTGAGACAGCAGTCTTGCTGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTACATATATACACACATaGGTGTTCCTGTCTGGCGTT | + |
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Preference number: 2 (lower is better) Translates to: TRLRSGRPRPGFGSGSLVTYIHT*VFLSGV Trigger: AACGCCAGACAGGAACACGCATGTGTGTATATATGT...AACCAAGGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGTTAGCAGACTTTCGCTaGAGCCACCTCAGAGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LHAPMVRVEQNRPGSFTMLADFR*SHLRAG Trigger: CCCAGCTCTGAGGTGGCTTCAGCGAAAGTCTGCTAA...CATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGGGGCTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTGTGGAGACTTGAACTaGACGTTTGAGTTCTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: DRGCMHRWSEWNRTDREVCGDLN*TFEFSV Trigger: CACAGAGAACTCAAACGTTCAGTTCAAGTCTCCACA...AACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAGCCCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGGGGAGCTCTCTTTCCTaGTGCGACTCTGTAAAACCC | + |
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Preference number: 2 (lower is better) Translates to: LHAPMVRVEQNRPGSFTMGSSLS*CDSVKP Trigger: GGGTTTTACAGAGTCGCAGCAGGAAAGAGAGCTCCC...CATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR CAA 90 bp | AGGGTCTGTCTCTCTTCTCTCAGAGTATTCAATTTCCTTAGGATTTaGAGCGTTATTCCTAATACACCCTTGAAACCCCCACACTCACAC | + |
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Preference number: 2 (lower is better) Translates to: RVCLSSLRVFNFLRI*SVIPNTPLKPPHSH Trigger: GTGTGAGTGTGGGGGTTTCAAGGGTGTATTAGGAATAACGCTCAAAATCCTAAGGAAATTGAATACTCTGAGAGAAGAGAGACAGACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAGGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTATTCCTAATACACCCTaGAAACCCCCACACTCACAC | + |
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Preference number: 3 (lower is better) Translates to: TRLRSGRPRPGFGSGSLVIPNTP*KPPHSH Trigger: GTGTGAGTGTGGGGGTTTCAAGGGTGTATTAGGAAT...AACCAAGGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR GCA 72 bp | GATCGATTGAGCAAGCAGGGGGTAGGTGACAGGGGCTaGATGCACCGATGGTCAGAGTGGAACAGAACAGAC | + |
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Preference number: 3 (lower is better) Translates to: DRLSKQGVGDRG*MHRWSEWNRTD Trigger: GTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAGCCCCTGTCACCTACCCCCTGCTTGCTCAATCGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR GCA 72 bp | GGAAGCGGTTTATTCGGCCAGGAGCATCAGCAAGACTaGTGTCTCAAGAGCCGAGCTCCCCGAGTGAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: GSGLFGQEHQQD*CLKSRAPRVSN Trigger: ATTGCTCACTCGGGGAGCTCGGCTCTTGAGACAGCAGTCTTGCTGATGCTCCTGGCCGAATAAACCGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR CCA 72 bp | AAGCAGGGGGTAGGTGACAGGGGCTGCATGCACCGATaGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: KQGVGDRGCMHR*SEWNRTDREVS Trigger: TGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAGCCCCTGTCACCTACCCCCTGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR CCA 72 bp | GGCCTGGTTTCGGGTCTGGTTCCTTGGTTTCAGGTCTaGTTCCTAGGCGCCAGGCTACCTGCCTTTAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: GLVSGLVPWFQV*FLGARLPAFSF Trigger: AAAACTAAAGGCAGGTAGCCTGGCGCCTAGGAACCAGACCTGAAACCAAGGAACCAGACCCGAAACCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR TCA 72 bp | AGCAAGACTGCTGTCTCAAGAGCCGAGCTCCCCGAGTaGGCAATTCCTGTCCCTTTTAAGGGCTCACAACTC | + |
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Preference number: 3 (lower is better) Translates to: SKTAVSRAELPE*AIPVPFKGSQL Trigger: GAGTTGTGAGCCCTTAAAAGGGACAGGAATTGCTCACTCGGGGAGCTCGGCTCTTGAGACAGCAGTCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR CCA 72 bp | GTAGGTGACAGGGGCTGCATGCACCGATGGTCAGAGTaGAACAGAACAGACCGGGAAGTTTCACAATGTCTT | + |
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Preference number: 3 (lower is better) Translates to: VGDRGCMHRWSE*NRTDREVSQCL Trigger: AAGACATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAGCCCCTGTCACCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR-3UTR CAA 90 bp | CTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGTTCGGGTCTGGTTCCTaGGTTTCAGGTCTGGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LHAPMVRVEQNRPGSFTMFGSGS*VSGLVP Trigger: AGGAACCAGACCTGAAACCAAGGAACCAGACCCGAA...CATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| 3UTR GCA 72 bp | ACACACATAGCACACGTGAACACATATATACACACATaGGTGTTCCTGTCTGGCGTTCACTTCTGGGGCTAC | + |
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Preference number: 3 (lower is better) Translates to: THIAHVNTYIHT*VFLSGVHFWGY Trigger: GTAGCCCCAGAAGTGAACGCCAGACAGGAACACGCATGTGTGTATATATGTGTTCACGTGTGCTATGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR CCA 90 bp | CCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTTCAGGTCTGGTTCCTAGGCGCCCGCGGTGTTCACCCTaGCCGGGCGTCTTCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: PRPGFGSGSLVSGLVPRRPRCSP*PGVFSE Trigger: CTCCGAGAAGACGCCCGGCCAGGGTGAACACCGCGG...GCGCCTAGGAACCAGACCTGAAACCAAGGAACCAGACCCGAAACCAGGCCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR TCA 90 bp | GACAGGGGCTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTCAAGCAGGGGGTAGGTaGCAGGGGCTGCATGCACCG | + |
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Preference number: 4 (lower is better) Translates to: DRGCMHRWSEWNRTDREVQAGGR*QGLHAP Trigger: CGGTGCATGCAGCCCCTGTCACCTACCCCCTGCTTG...AACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAGCCCCTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR TCA 90 bp | ACCAGGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTGCCGAGCTCCCCGAGTaGGCAATTCCTGTCCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TRLRSGRPRPGFGSGSLVAELPE*AIPVPF Trigger: AAAAGGGACAGGAATTGCTCACTCGGGGAGCTCGGC...AACCAAGGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR TCA 90 bp | ACCAGGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTTTAGCAGACTTTCGCTaGAGCCACCTCAGAGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TRLRSGRPRPGFGSGSLVLADFR*SHLRAG Trigger: CCCAGCTCTGAGGTGGCTTCAGCGAAAGTCTGCTAA...AACCAAGGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR TCA 90 bp | TTAACTACCAGGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCCTAAGGGGGTCCACGTaGGAGGGTCGTGATCGATTG | + |
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Preference number: 4 (lower is better) Translates to: LTTRLRSGRPRPGFGSGSLRGST*EGRDRL Trigger: CAATCGATCACGACCCTCTCACGTGGACCCCCTTAG...GGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCCTGGTAGTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR GCA 90 bp | ACCAGGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTGGGAGCTCTCTTTCCTaGTGCGACTCTGTAAAACCC | + |
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Preference number: 4 (lower is better) Translates to: TRLRSGRPRPGFGSGSLVGSSLS*CDSVKP Trigger: GGGTTTTACAGAGTCGCAGCAGGAAAGAGAGCTCCC...AACCAAGGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR CCA 90 bp | TTAACTACCAGGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCTCGGGTCTGGTTCCTTaGTTTCAGGTCTGGTTCCTA | + |
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Preference number: 4 (lower is better) Translates to: LTTRLRSGRPRPGFGSGSSGLVP*FQVWFL Trigger: TAGGAACCAGACCTGAAACCAAGGAACCAGACCCGA...GGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCCTGGTAGTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR GCA 90 bp | GACAGGGGCTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTAGCTCTCTTTCCTGCTaGGACTCTGTAAAACCCTAC | + |
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Preference number: 4 (lower is better) Translates to: DRGCMHRWSEWNRTDREVSSLSC*DSVKPY Trigger: GTAGGGTTTTACAGAGTCGCAGCAGGAAAGAGAGCT...AACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAGCCCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR GCA 90 bp | TGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGTGTGACAGGGGCTGCATaGACCGATGGTCAGAGTGGA | + |
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Preference number: 4 (lower is better) Translates to: CMHRWSEWNRTDREVSQCVTGAA*TDGQSG Trigger: TCCACTCTGACCATCGGTGCATGCAGCCCCTGTCAC...ACATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR GCA 90 bp | GACAGGGGCTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTCAAGGAGGTTTGACTTaGTGCCTAGGTGTCCATTCT | + |
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Preference number: 4 (lower is better) Translates to: DRGCMHRWSEWNRTDREVQGGLT*CLGVHS Trigger: AGAATGGACACCTAGGCAGCAAGTCAAACCTCCTTG...AACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAGCCCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR CCA 90 bp | TGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGTATGCGTGTTCCTGTCTaGCGTTCACTTCTGGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: CMHRWSEWNRTDREVSQCMRVPV*RSLLGL Trigger: TAGCCCCAGAAGTGAACGCCAGACAGGAACACGCAT...ACATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR CCA 90 bp | CTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGGTCATTACAGCAGCGTaGATCAGAATATTGCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: LHAPMVRVEQNRPGSFTMVITAA*IRILPL Trigger: GAGCGGCAATATTCTGATCCACGCTGCTGTAATGAC...CATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR GCA 90 bp | TGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGTGGAGGTTTGACTTGCTaGCTAGGTGTCCATTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: CMHRWSEWNRTDREVSQCGGLTC*LGVHSS Trigger: TGAAGAATGGACACCTAGGCAGCAAGTCAAACCTCC...ACATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR TCA 90 bp | TGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGTTGTGGAGACTTGAACTaGACGTTTGAGTTCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: CMHRWSEWNRTDREVSQCCGDLN*TFEFSV Trigger: CACAGAGAACTCAAACGTTCAGTTCAAGTCTCCACA...ACATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR GCA 90 bp | CTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGACATATATACACACATaGGTGTTCCTGTCTGGCGTT | + |
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Preference number: 4 (lower is better) Translates to: LHAPMVRVEQNRPGSFTMTYIHT*VFLSGV Trigger: AACGCCAGACAGGAACACGCATGTGTGTATATATGT...CATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR CCA 90 bp | AACAATATAAAACAGTATGAGAGGGTCTGTCTCTCTTCTCTCAGAGTATTCAATCACCGATGGTCAGAGTaGAACAGAACAGACCGGGAA | + |
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Preference number: 4 (lower is better) Translates to: NNIKQYERVCLSSLRVFNHRWSE*NRTDRE Trigger: TTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTG...ATTGAATACTCTGAGAGAAGAGAGACAGACCCTCTCATACTGTTTTATATTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR CAA 90 bp | CCCAGGCCTGGTTTCGGGTCTGGTTCCTTGGTTTCAGGTCTGGTTCCTAGGCGCTTCGGGTCTGGTTCCTaGGTTTCAGGTCTGGTTCCT | + |
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Preference number: 5 (lower is better) Translates to: PRPGFGSGSLVSGLVPRRFGSGS*VSGLVP Trigger: AGGAACCAGACCTGAAACCAAGGAACCAGACCCGAA...GCGCCTAGGAACCAGACCTGAAACCAAGGAACCAGACCCGAAACCAGGCCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS-3UTR CAA 90 bp | TTAACTACCAGGCTTAGGTCAGGCCGGCCCAGGCCTGGTTTCGGGTCTGGTTCCATTCCTAATACACCCTaGAAACCCCCACACTCACAC | + |
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Preference number: 5 (lower is better) Translates to: LTTRLRSGRPRPGFGSGSIPNTP*KPPHSH Trigger: GTGTGAGTGTGGGGGTTTCAAGGGTGTATTAGGAAT...GGAACCAGACCCGAAACCAGGCCTGGGCCGGCCTGACCTAAGCCTGGTAGTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS TCA 90 bp | GTTGCACATGGTCGGAGAGGCCTCACACTCATGGCAGAAGGCAGGTaGGGAACAAAGTCACATCTCTTACATGGCAGCAGGCAAAAGAGC | + |
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Preference number: 5 (lower is better) Translates to: VAHGRRGLTLMAEGR*GTKSHLLHGSRQKS Trigger: GCTCTTTTGCCTGCTGCCATGTAAGAGATGTGACTTTGTTCCTCACCTGCCTTCTGCCATGAGTGTGAGGCCTCTCCGACCATGTGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000569206.1 |
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| CDS-3UTR CAA 90 bp | CTGCATGCACCGATGGTCAGAGTGGAACAGAACAGACCGGGAAGTTTCACAATGCCAAGGAGGTTTGACTaGCTGCCTAGGTGTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: LHAPMVRVEQNRPGSFTMPRRFD*LPRCPF Trigger: GAATGGACACCTAGGCAGCAAGTCAAACCTCCTTGG...CATTGTGAAACTTCCCGGTCTGTTCTGTTCCACTCTGACCATCGGTGCATGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449207.8 |
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| CDS GCA 90 bp | GAAGCCAGTGCTATGCTTTCTGTACAGCCTGTCAGAGTCCACAGGTaGTCCCAGCCTTTCTGGCATACAGGTTGTATTAGTCTGTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: EASAMLSVQPVRVHR*SQPFWHTGCISLFS Trigger: TGAGAACAGACTAATACAACCTGTATGCCAGAAAGGCTGGGAGCACCTGTGGACTCTGACAGGCTGTACAGAAAGCATAGCACTGGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569206.1 |
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| CDS TCA 72 bp | GGTCGGAGAGGCCTCACACTCATGGCAGAAGGCAGGTaGGGAACAAAGTCACATCTCTTACATGGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: GRRGLTLMAEGR*GTKSHLLHGSR Trigger: CCTGCTGCCATGTAAGAGATGTGACTTTGTTCCTCACCTGCCTTCTGCCATGAGTGTGAGGCCTCTCCGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569206.1 |
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| CDS GCA 72 bp | TCAGTTGTCAGAGGCTTCACCAGAAGCAGAAGCCAGTaGTATGCTTTCTGTACAGCCTGTCAGAGTCCACAG | + |
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Preference number: 6 (lower is better) Translates to: SVVRGFTRSRSQ*YAFCTACQSPQ Trigger: CTGTGGACTCTGACAGGCTGTACAGAAAGCATAGCACTGGCTTCTGCTTCTGGTGAAGCCTCTGACAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569206.1 |
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| CDS TCA 72 bp | CCAAGCGCCCTGCTGTCATGTCAGTATTGCGGCATGTaGTGTGCAAGCACCGGATTTATTTTTCACCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: PSALLSCQYCGM*CASTGFIFHLD Trigger: ATCAAGGTGAAAAATAAATCCGGTGCTTGCACATCACATGCCGCAATACTGACATGACAGCAGGGCGCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569206.1 |
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| CDS CAA 72 bp | AAGCTGTGTACCAAGCGCCCTGCTGTCATGTCAGTATaGCGGCATGTGATGTGCAAGCACCGGATTTATTTT | + |
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Preference number: 6 (lower is better) Translates to: KLCTKRPAVMSV*RHVMCKHRIYF Trigger: AAAATAAATCCGGTGCTTGCACATCACATGCCGCAATACTGACATGACAGCAGGGCGCTTGGTACACAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000569206.1 |
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| CDS CAA 72 bp | GCAAGCACCGGATTTATTTTTCACCTTGATTGTCAGTaGTCAGAGGCTTCACCAGAAGCAGAAGCCAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ASTGFIFHLDCQ*SEASPEAEASA Trigger: AGCACTGGCTTCTGCTTCTGGTGAAGCCTCTGACAACTGACAATCAAGGTGAAAAATAAATCCGGTGCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569206.1 |
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| CDS TCA 72 bp | CATGTGATGTGCAAGCACCGGATTTATTTTTCACCTTaGTTGTCAGTTGTCAGAGGCTTCACCAGAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HVMCKHRIYFSP*LSVVRGFTRSR Trigger: TCTGCTTCTGGTGAAGCCTCTGACAACTGACAATCAAGGTGAAAAATAAATCCGGTGCTTGCACATCACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000569206.1 |
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