RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDM16 (Homo sapiens)

Ensembl gene IDs: ENSG00000142611

Ensembl transcript IDs: ENST00000270722.10, ENST00000378389.5, ENST00000378391.6, ENST00000463591.1, ENST00000509860.1, ENST00000511072.5, ENST00000512462.5, ENST00000514189.5, ENST00000606170.1, ENST00000607632.1

Found 1579 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGGTCAGGTGGGAGGTGGGAGACCCAGGACGTGGCCAAGGCCCTaGCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTGGCCGAGG +
Preference number: 1 (lower is better)
Translates to: WGQVGGGRPRTWPRP*LQRTALGSRVGWPR
Trigger: CCTCGGCCACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCCTGGGTCTCCCACCTCCCACCTGACCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 90 bp TCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTaGTCCCCAGGGCAGCCACGTGGAGGACACCGGAGCCGCTGGGGT +
Preference number: 1 (lower is better)
Translates to: SGTGAAWWPGAIRWD*SPGQPRGGHRSRWG
Trigger: ACCCCAGCGGCTCCGGTGTCCTCCACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 90 bp CCCCAGGGCAGCCACGTGGAGGACACCGGAGCCGCTGGGGTCAGGTaGGAGGTGGGAGACCCAGGACGTGGCCAAGGCCCTGCCTTCAGA +
Preference number: 1 (lower is better)
Translates to: PQGSHVEDTGAAGVR*EVGDPGRGQGPAFR
Trigger: TCTGAAGGCAGGGCCTTGGCCACGTCCTGGGTCTCCCACCTCCCACCTGACCCCAGCGGCTCCGGTGTCCTCCACGTGGCTGCCCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 90 bp CCCGGGCCAGGCTCCCTGGCCCTTGTCATCTCTGGGCACCAACACTaGTGGGCAGAGCAAAACTGGGAGGGCGAGGCTCGCTGGGGCCTG +
Preference number: 1 (lower is better)
Translates to: PGPGSLALVISGHQH*WAEQNWEGEARWGL
Trigger: CAGGCCCCAGCGAGCCTCGCCCTCCCAGTTTTGCTCTGCCCAGCAGTGTTGGTGCCCAGAGATGACAAGGGCCAGGGAGCCTGGCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 90 bp AGGCCTGCAGCCCAGGGCGCCCTGCCTAAGACTTCTTCGGCCGTCTaGATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGG +
Preference number: 1 (lower is better)
Translates to: RPAAQGALPKTSSAV*MVHGCGPAPLVLPR
Trigger: CCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAAGTCTTAGGCAGGGCGCCCTGGGCTGCAGGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 90 bp CTGCAGCCCAGGGCGCCCTGCCTAAGACTTCTTCGGCCGTCTGCATaGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCA +
Preference number: 1 (lower is better)
Translates to: LQPRAPCLRLLRPSA*FTGVAPRLLFCLGA
Trigger: TGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAAGTCTTAGGCAGGGCGCCCTGGGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 90 bp CGACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTaGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGT +
Preference number: 1 (lower is better)
Translates to: RLCRPSGVSGTGAAW*PGAIRWDCSPGQPR
Trigger: ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 90 bp AGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTaGGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGG +
Preference number: 1 (lower is better)
Translates to: SDVTTVSSIRSLRHR*GLVARSDPLGLLPR
Trigger: CCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 90 bp CAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCACTGG +
Preference number: 1 (lower is better)
Translates to: QSIHSLPRPHAGTRQ*PPASVSAERPPAHW
Trigger: CCAGTGGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR GCA 90 bp GGCCCCCGGCTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATaGTCCAGACTCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTC +
Preference number: 1 (lower is better)
Translates to: GPRLPSPSEVVDGVK*SRLRRGSSDLQPSV
Trigger: GACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAGCCGGGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR CCA 90 bp TTCACTGTGATCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTaGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAG +
Preference number: 1 (lower is better)
Translates to: FTVIRRVEPPAGASP*HVFSASLDHPAPTE
Trigger: CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGATCACAGTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp GCTGGACTCTGGGGACGTGGAGGTCTTGGCCAGTCGGGGTCTGGATaGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCCTCTCCAGC +
Preference number: 1 (lower is better)
Translates to: AGLWGRGGLGQSGSG*DSCTRGLVKEGLSS
Trigger: GCTGGAGAGGCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCCAAGACCTCCACGTCCCCAGAGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp CAGGGCTGGACTCTGGGGACGTGGAGGTCTTGGCCAGTCGGGGTCTaGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCCTCTC +
Preference number: 1 (lower is better)
Translates to: QGWTLGTWRSWPVGV*MGQLHAWPCKGRPL
Trigger: GAGAGGCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCCAAGACCTCCACGTCCCCAGAGTCCAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 90 bp GGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCACTGGCTaGTTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCT +
Preference number: 1 (lower is better)
Translates to: GHQLLSQQSVHLPTG*FCEAAPLAVFGRPP
Trigger: AGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR GCA 90 bp CACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTaGCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTG +
Preference number: 1 (lower is better)
Translates to: HPAVATSFCLSRAST*PLADSARQLRWLSL
Trigger: CAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR GCA 90 bp TGGCCATGGACACAGCCAGCTGCCCCGTCGCATCCCTGTCCATGCTaGACAGTTACATGGCCCCGTTACGGTGTGGTGACAGCTGGAGGC +
Preference number: 1 (lower is better)
Translates to: WPWTQPAAPSHPCPC*TVTWPRYGVVTAGG
Trigger: GCCTCCAGCTGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGACGGGGCAGCTGGCTGTGTCCATGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp CAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCACTaGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCC +
Preference number: 1 (lower is better)
Translates to: QWPPASVSAERPPAH*LILRGSSVGCLWTA
Trigger: GGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CCA 90 bp CTGAATTCTCACACCCGGGCCAGGCTCCCTGGCCCTTGTCATCTCTaGGCACCAACACTGCTGGGCAGAGCAAAACTGGGAGGGCGAGGC +
Preference number: 1 (lower is better)
Translates to: LNSHTRARLPGPCHL*APTLLGRAKLGGRG
Trigger: GCCTCGCCCTCCCAGTTTTGCTCTGCCCAGCAGTGTTGGTGCCCAGAGATGACAAGGGCCAGGGAGCCTGGCCCGGGTGTGAGAATTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 90 bp TTGCCTCGTTGTGCAGATCTGGCGTGGGAGGAATCCCTTTCACTGTaGTCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTGGCACG +
Preference number: 1 (lower is better)
Translates to: LPRCADLAWEESLSL*SVGLSLLQEPPRGT
Trigger: CGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 90 bp CGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTaGCTCGGGGCACCCAGCATCACCTTGGCTTATACAAATAGGGAC +
Preference number: 1 (lower is better)
Translates to: RPSAWFTGVAPRLLF*LGAPSITLAYTNRD
Trigger: GTCCCTATTTGTATAAGCCAAGGTGATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 90 bp CATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTaGAGATCTGGCGTGGGAGGAATCCCTTTCACTGTGATCCGTCGG +
Preference number: 1 (lower is better)
Translates to: HGPSARTGGSCLASL*RSGVGGIPFTVIRR
Trigger: CCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 90 bp ACCTGGCCATGGACACAGCCAGCTGCCCCGTCGCATCCCTGTCCATaGTGCACAGTTACATGGCCCCGTTACGGTGTGGTGACAGCTGGA +
Preference number: 1 (lower is better)
Translates to: TWPWTQPAAPSHPCP*CTVTWPRYGVVTAG
Trigger: TCCAGCTGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGACGGGGCAGCTGGCTGTGTCCATGGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 90 bp TTGGGTGGGGACCTGTGGATTCCTCTGAAGGCCACGTGGCGGTCCTaGCACCAATTCCATGTCACACGAGGGCAGGCACACTTCCCATCC +
Preference number: 1 (lower is better)
Translates to: LGGDLWIPLKATWRS*HQFHVTRGQAHFPS
Trigger: GGATGGGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGAATCCACAGGTCCCCACCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR TCA 90 bp TGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTaGCGACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCT +
Preference number: 1 (lower is better)
Translates to: CSQAVSRQEPAGRAT*RLCRPSGVSGTGAA
Trigger: AGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR TCA 90 bp CCGGAGACCAACGGTAAGGGCGGCTCTCATCGGTTCTGCTCCTGCTaGAAAGACACGCTGAGGGCTCCATCCGTCCGAATGTCCCACTTC +
Preference number: 1 (lower is better)
Translates to: PETNGKGGSHRFCSC*KDTLRAPSVRMSHF
Trigger: GAAGTGGGACATTCGGACGGATGGAGCCCTCAGCGTGTCTTTTCAGCAGGAGCAGAACCGATGAGAGCCGCCCTTACCGTTGGTCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 90 bp ACATGGCCCCGTTACGGTGTGGTGACAGCTGGAGGCCAGAATCTCTaGATTCTCACACCCGGGCCAGGCTCCCTGGCCCTTGTCATCTCT +
Preference number: 1 (lower is better)
Translates to: TWPRYGVVTAGGQNL*ILTPGPGSLALVIS
Trigger: AGAGATGACAAGGGCCAGGGAGCCTGGCCCGGGTGTGAGAATTCAGAGATTCTGGCCTCCAGCTGTCACCACACCGTAACGGGGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 90 bp GCAGGGACAGAGGAGGGAAGGAAGATGGGTGCCCGGCCACATCTCTaGATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAAT +
Preference number: 1 (lower is better)
Translates to: AGTEEGRKMGARPHL*MADPSHRPSTSPYN
Trigger: ATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTGGCCGGGCACCCATCTTCCTTCCCTCCTCTGTCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 90 bp CCTGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGAC +
Preference number: 1 (lower is better)
Translates to: PAHWLILRGSSVGCL*TATCMAVTEQCSQD
Trigger: GTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CCA 90 bp GATTGTCTTTTGTCCTGGAGCAGCCAGGACACCTCCCGTCACCGCTaGGGACAGCCTGAGGAGATGTCCACGCGTGACACAAAGCCTGAG +
Preference number: 1 (lower is better)
Translates to: DCLLSWSSQDTSRHR*GQPEEMSTRDTKPE
Trigger: CTCAGGCTTTGTGTCACGCGTGGACATCTCCTCAGGCTGTCCCCAGCGGTGACGGGAGGTGTCCTGGCTGCTCCAGGACAAAAGACAATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp AAGACAGGACGGTTAGGAAGACAGCCGAAAACGGCGGGATGGGACTaGGGGATCCGGAGACCAACGGTAAGGGCGGCTCTCATCGGTTCT +
Preference number: 1 (lower is better)
Translates to: KTGRLGRQPKTAGWD*GIRRPTVRAALIGS
Trigger: AGAACCGATGAGAGCCGCCCTTACCGTTGGTCTCCGGATCCCCCAGTCCCATCCCGCCGTTTTCGGCTGTCTTCCTAACCGTCCTGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp CAAGAGAAGACAGGACGGTTAGGAAGACAGCCGAAAACGGCGGGATaGGACTGGGGGATCCGGAGACCAACGGTAAGGGCGGCTCTCATC +
Preference number: 1 (lower is better)
Translates to: QEKTGRLGRQPKTAG*DWGIRRPTVRAALI
Trigger: GATGAGAGCCGCCCTTACCGTTGGTCTCCGGATCCCCCAGTCCCATCCCGCCGTTTTCGGCTGTCTTCCTAACCGTCCTGTCTTCTCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp CTGGAGGCCAGAATCTCTGAATTCTCACACCCGGGCCAGGCTCCCTaGCCCTTGTCATCTCTGGGCACCAACACTGCTGGGCAGAGCAAA +
Preference number: 1 (lower is better)
Translates to: LEARISEFSHPGQAP*PLSSLGTNTAGQSK
Trigger: TTTGCTCTGCCCAGCAGTGTTGGTGCCCAGAGATGACAAGGGCCAGGGAGCCTGGCCCGGGTGTGAGAATTCAGAGATTCTGGCCTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 90 bp GGTGGGTCTGACCCAGGGGATGTTGTGGAAACGCGTGAGAAGGCCTaGGCAGTTGTGTTTGCAGATCCTGGATCCTTCCCGACACGCCAG +
Preference number: 1 (lower is better)
Translates to: GGSDPGDVVETREKA*AVVFADPGSFPTRQ
Trigger: CTGGCGTGTCGGGAAGGATCCAGGATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCCCTGGGTCAGACCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp GGACAGAGGAGGGAAGGAAGATGGGTGCCCGGCCACATCTCTGCATaGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTGAG +
Preference number: 1 (lower is better)
Translates to: GQRREGRWVPGHISA*RIQATGPRLPHIIE
Trigger: CTCAATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTGGCCGGGCACCCATCTTCCTTCCCTCCTCTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 90 bp TCCATGCTGCACAGTTACATGGCCCCGTTACGGTGTGGTGACAGCTaGAGGCCAGAATCTCTGAATTCTCACACCCGGGCCAGGCTCCCT +
Preference number: 1 (lower is better)
Translates to: SMLHSYMAPLRCGDS*RPESLNSHTRARLP
Trigger: AGGGAGCCTGGCCCGGGTGTGAGAATTCAGAGATTCTGGCCTCCAGCTGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp CAGGGTGCAGGGGCTCGATCCTCTGGGTTGAAGTCAGTGATATCTTaGGTCCCACTCATGAAGGGTCTGCCAGGCCCACAGAGGAGGAAC +
Preference number: 1 (lower is better)
Translates to: QGAGARSSGLKSVIS*VPLMKGLPGPQRRN
Trigger: GTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATGAGTGGGACCCAAGATATCACTGACTTCAACCCAGAGGATCGAGCCCCTGCACCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 90 bp ATCCCTGTCCATGCTGCACAGTTACATGGCCCCGTTACGGTGTGGTaGCAGCTGGAGGCCAGAATCTCTGAATTCTCACACCCGGGCCAG +
Preference number: 1 (lower is better)
Translates to: IPVHAAQLHGPVTVW*QLEARISEFSHPGQ
Trigger: CTGGCCCGGGTGTGAGAATTCAGAGATTCTGGCCTCCAGCTGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 90 bp CTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAG +
Preference number: 1 (lower is better)
Translates to: LILRGSSVGCLWTAT*MAVTEQCSQDQSLE
Trigger: CTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CCA 90 bp TTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGG +
Preference number: 1 (lower is better)
Translates to: FCEAAPLAVFGRPPA*PSLNSVLKTNPWRW
Trigger: CCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CCA 90 bp GAAATTCCTACGGGGTACCTGGTGGGTCTGACCCAGGGGATGTTGTaGAAACGCGTGAGAAGGCCTGAGCAGTTGTGTTTGCAGATCCTG +
Preference number: 1 (lower is better)
Translates to: EIPTGYLVGLTQGML*KRVRRPEQLCLQIL
Trigger: CAGGATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCCCTGGGTCAGACCCACCAGGTACCCCGTAGGAATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 90 bp CACGCTTTAAATTACGACTCTGACACCAGGGCTCAGCATCCCTCGTaGCGAAAGCGCAGTGGCAATGCACGTGACGCTGAAGGCAATTGT +
Preference number: 1 (lower is better)
Translates to: HALNYDSDTRAQHPS*RKRSGNARDAEGNC
Trigger: ACAATTGCCTTCAGCGTCACGTGCATTGCCACTGCGCTTTCGGCACGAGGGATGCTGAGCCCTGGTGTCAGAGTCGTAATTTAAAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 90 bp TTAAGGGACAAAGTCCATATACACACACGCTTTAAATTACGACTCTaGCACCAGGGCTCAGCATCCCTCGTGCCGAAAGCGCAGTGGCAA +
Preference number: 1 (lower is better)
Translates to: LRDKVHIHTRFKLRL*HQGSASLVPKAQWQ
Trigger: TTGCCACTGCGCTTTCGGCACGAGGGATGCTGAGCCCTGGTGTCAGAGTCGTAATTTAAAGCGTGTGTGTATATGGACTTTGTCCCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 90 bp TCACGTCTTATTTCATTCTTCTCCCACAGCGATTTCCGTATTAATTaGGAACTGCGCCTCTTTCGCGTCAGCAGTTCAGGACTCCTAGTC +
Preference number: 1 (lower is better)
Translates to: SRLISFFSHSDFRIN*ELRLFRVSSSGLLV
Trigger: GACTAGGAGTCCTGAACTGCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAAGAATGAAATAAGACGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 90 bp CAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTaGTTTAGGGACTTTTGGGATCTGAGTTTCCATTGGAAAAGTCGG +
Preference number: 1 (lower is better)
Translates to: QCSQDQSLEMVRLYD*FRDFWDLSFHWKSR
Trigger: CCGACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CCA 90 bp CAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGGAAAAGTCGGAATGAACCATGGTGG +
Preference number: 1 (lower is better)
Translates to: QSLEMVRLYDCFRDF*DLSFHWKSRNEPWW
Trigger: CCACCATGGTTCATTCCGACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR TCA 90 bp CACGTGACGCTGAAGGCAATTGTTAGAATGACTTTTGTTCACAAGTaGATCACACGTTTGGAAACTCAAGCTGCCTTTTATTTATTTATT +
Preference number: 1 (lower is better)
Translates to: HVTLKAIVRMTFVHK*ITRLETQAAFYLFI
Trigger: AATAAATAAATAAAAGGCAGCTTGAGTTTCCAAACGTGTGATTCACTTGTGAACAAAAGTCATTCTAACAATTGCCTTCAGCGTCACGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 90 bp TTCATCACAAGCATCAGAATGCAATTTGCAAAATTGTTCTTTTCATaGTTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCG +
Preference number: 1 (lower is better)
Translates to: FITSIRMQFAKLFFS*FPTLHVLFHSSPTA
Trigger: CGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAAAGAACAATTTTGCAAATTGCATTCTGATGCTTGTGATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 90 bp CTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATaGCTCCCCAGGGCAGCCACGTGGAGGACACCGGAGCCGCTGGGG +
Preference number: 2 (lower is better)
Translates to: LRHRCGLVARSDPLG*LPRAATWRTPEPLG
Trigger: CCCCAGCGGCTCCGGTGTCCTCCACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTGGACACCGGAGCCGCTaGGGTCAGGTGGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRGHRSR*GQVGGG
Trigger: CCCACCTCCCACCTGACCCCAGCGGCTCCGGTGTCC...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR TCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 2 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 2 (lower is better)
Translates to: PRPHAGTRQWPPASVSAERLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 2 (lower is better)
Translates to: FPSATPRGHPAVATSFCLGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 2 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp GGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGACGTGGCCAAGGCCCTaGCTTCAGAGGACGGCGCTG +
Preference number: 2 (lower is better)
Translates to: GTGAAWWPGAIRWDCSPGTWPRP*LQRTAL
Trigger: CAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGT...CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR GCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGTCCTTCGTGGCTGGTaGCCTCGCTCTGGCCACCGG +
Preference number: 2 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWVLRGW*PRSGHR
Trigger: CCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGAC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 2 (lower is better)
Translates to: TPVYPFPSATPRGHPAVARLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 2 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWRLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCACTaGCTGATTCTGCGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: PRPHAGTRQWPPASVSAERPPAH*LILRGS
Trigger: GCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GCCTCCCCGTGGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGCCCGGAGCGATCCGCTaGGATTGCTCCCCAGGGCAG +
Preference number: 2 (lower is better)
Translates to: ASPWHVFSASLDHPAPTEPGAIR*DCSPGQ
Trigger: CTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGG...CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 90 bp GTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTaGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCC +
Preference number: 2 (lower is better)
Translates to: VTTVSSIRSLRHRCG*VARSDPLGLLPRAA
Trigger: GGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTCGTCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR TCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 2 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGTCCTTCGTGGCTGGTaGCCTCGCTCTGGCCACCGG +
Preference number: 2 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSVLRGW*PRSGHR
Trigger: CCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGAC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: YPFPSATPRGHPAVATSFSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGCGAGGCAGCTCCGTTaGCTGTCTTTGGACGGCCAC +
Preference number: 2 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQARQLR*LSLDGH
Trigger: GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGC...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGCGAGGCAGCTCCGTTaGCTGTCTTTGGACGGCCAC +
Preference number: 2 (lower is better)
Translates to: FPSATPRGHPAVATSFCLARQLR*LSLDGH
Trigger: GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GCCTCCCCGTGGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: ASPWHVFSASLDHPAPTEAGTRQ*PPASVS
Trigger: TGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGC...CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTCATGGTTCACGGGTGTaGCCCCGCGCCTCTTGTTCT +
Preference number: 2 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRHGSRV*PRASCS
Trigger: AGAACAAGAGGCGCGGGGCCACACCCGTGAACCATG...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATTTCAGAGGACGGCGCTaGGTTCCCGCGTGGGGTGGC +
Preference number: 2 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDFRGRR*VPAWGG
Trigger: GCCACCCCACGCGGGAACCCAGCGCCGTCCTCTGAA...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCCTGGGAGGGGGTGTaGAGAGGAGTGTCTTCGGAA +
Preference number: 2 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEPWEGV*RGVSSE
Trigger: TTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGCAGCCCAGGGCGCCCTaGCTAAGACTTCTTCGGCCG +
Preference number: 2 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGQPRAP*LRLLRP
Trigger: CGGCCGAAGAAGTCTTAGGCAGGGCGCCCTGGGCTG...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR GCA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGAGTCTCAGGCACAGGTaGGGCTTGGTGGCCCGGAGC +
Preference number: 2 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGSLRHR*GLVARS
Trigger: GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACT...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGGAATGAACCATGGTaGGTGGGGAGGATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: PRPHAGTRQWPPASVSAERNEPW*VGRMLR
Trigger: CCTCAGCATCCTCCCCACCCACCATGGTTCATTCCG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGCGAGGCAGCTCCGTTaGCTGTCTTTGGACGGCCAC +
Preference number: 2 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAARQLR*LSLDGH
Trigger: GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTAGGAGGGAAGGAAGATaGGTGCCCGGCCACATCTCT +
Preference number: 2 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGRREGR*VPGHIS
Trigger: AGAGATGTGGCCGGGCACCCATCTTCCTTCCCTCCT...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGGGTTCCCGCGTGGGGTaGCCGAGGCAGGGACAGAGG +
Preference number: 2 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLGSRVG*PRQGQR
Trigger: CCTCTGTCCCTGCCTCGGCCACCCCACGCGGGAACC...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCCCTGGGAGGGGGTGTaGAGAGGAGTGTCTTCGGAA +
Preference number: 2 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPPWEGV*RGVSSE
Trigger: TTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR CAA 90 bp GGGCCCTTGGAATTTCCAGGGCTGGACTCTGGGGACGTGGAGGTCTaGGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTG +
Preference number: 2 (lower is better)
Translates to: GPLEFPGLDSGDVEV*ASRGLDGTAARVAL
Trigger: CAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCCAAGACCTCCACGTCCCCAGAGTCCAGCCCTGGAAATTCCAAGGGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCCACCTGCCCACTGGCTaGTTCTGCGAGGCAGCTCCG +
Preference number: 2 (lower is better)
Translates to: FFGRLHGSRVWPRASCSAHLPTG*FCEAAP
Trigger: CGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTG...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCAGCAGAGCGTCCACCTaGCCACTGGCTGATTCTGCG +
Preference number: 2 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASRAST*PLADSA
Trigger: CGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCT...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCAGCAGAGCGTCCACCTaGCCACTGGCTGATTCTGCG +
Preference number: 2 (lower is better)
Translates to: YPFPSATPRGHPAVATSFSRAST*PLADSA
Trigger: CGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCT...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 2 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAGGACACCGGAGCCGCTaGGGTCAGGTGGGAGGTGGG +
Preference number: 2 (lower is better)
Translates to: NPQEERRDDCVVHPESQAGHRSR*GQVGGG
Trigger: CCCACCTCCCACCTGACCCCAGCGGCTCCGGTGTCC...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR TCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGTTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: PRPHAGTRQWPPASVSAELEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCAGGTGGTTGATGGGGTaGAATGCTCCAGACTCCGAC +
Preference number: 2 (lower is better)
Translates to: RGHPAVATSFCLSRASTCRWLMG*NAPDSD
Trigger: GTCGGAGTCTGGAGCATTTCACCCCATCAACCACCT...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp TGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGGGCCCGGCCACATCTCTaGATGGCGGATCCAAGCCAC +
Preference number: 2 (lower is better)
Translates to: WPQRTHRWVLSCLVVQIWARPHL*MADPSH
Trigger: GTGGCTTGGATCCGCCATGCAGAGATGTGGCCGGGC...CCAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCGGAATGAACCATGGTaGGTGGGGAGGATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPRNEPW*VGRMLR
Trigger: CCTCAGCATCCTCCCCACCCACCATGGTTCATTCCG...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGTCGGAATGAACCATaGTGGGTGGGGAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: FPSATPRGHPAVATSFCLSRNEP*WVGRML
Trigger: CAGCATCCTCCCCACCCACCATGGTTCATTCCGACT...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 2 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 2 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCATGGTTCACGGGTGTaGCCCCGCGCCTCTTGTTCT +
Preference number: 2 (lower is better)
Translates to: DCVVHPESQAQVRLGGPEHGSRV*PRASCS
Trigger: AGAACAAGAGGCGCGGGGCCACACCCGTGAACCATG...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTGGGAGACCCAGGACGTaGCCAAGGCCCTGCCTTCAG +
Preference number: 2 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSGRPRT*PRPCLQ
Trigger: CTGAAGGCAGGGCCTTGGCCACGTCCTGGGTCTCCC...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp GGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCTCCCGACACGCCAGCTaGCTCTTCTGCAGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: GQSGSGWDSCTRGLVKEGSRHAS*LFCRQL
Trigger: GAGCTGCCTGCAGAAGAGCCAGCTGGCGTGTCGGGA...GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 2 (lower is better)
Translates to: FPSATPRGHPAVATSFCLLHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGAGGTGGTTGATGGGGTaGAATGCTCCAGACTCCGAC +
Preference number: 2 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLRWLMG*NAPDSD
Trigger: GTCGGAGTCTGGAGCATTTCACCCCATCAACCACCT...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp ACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAG +
Preference number: 2 (lower is better)
Translates to: TVSSIRSLRHRCGLVARSLWTAT*MAVTEQ
Trigger: CTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAG...GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGTTGATGGGGTGAAATaGTCCAGACTCCGACGTGGC +
Preference number: 2 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLVDGVK*SRLRRG
Trigger: GCCACGTCGGAGTCTGGAGCATTTCACCCCATCAAC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTCGGAATGAACCATGGTaGGTGGGGAGGATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSRNEPW*VGRMLR
Trigger: CCTCAGCATCCTCCCCACCCACCATGGTTCATTCCG...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 2 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 2 (lower is better)
Translates to: FFGRLHGSRVWPRASCSASVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCA +
Preference number: 2 (lower is better)
Translates to: NPQEERRDDCVVHPESQAAGTRQ*PPASVS
Trigger: TGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGC...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTCTTCGGCCGTCTGCATaGTTCACGGGTGTGGCCCCG +
Preference number: 2 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSLRPSA*FTGVAP
Trigger: CGGGGCCACACCCGTGAACCATGCAGACGGCCGAAG...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATAGGAGGGAAGGAAGATaGGTGCCCGGCCACATCTCT +
Preference number: 2 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDRREGR*VPGHIS
Trigger: AGAGATGTGGCCGGGCACCCATCTTCCTTCCCTCCT...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTTGGGCAGAGCAAAACTaGGAGGGCGAGGCTCGCTGG +
Preference number: 2 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSWAEQN*EGEARW
Trigger: CCAGCGAGCCTCGCCCTCCCAGTTTTGCTCTGCCCA...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLLEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 2 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWLHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCTGCCCACTGGCTaGTTCTGCGAGGCAGCTCCG +
Preference number: 2 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGHLPTG*FCEAAP
Trigger: CGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTG...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAG +
Preference number: 2 (lower is better)
Translates to: FFGRLHGSRVWPRASCSALWTAT*MAVTEQ
Trigger: CTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAG...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGTCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGCGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 2 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWRLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 2 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPSVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 2 (lower is better)
Translates to: CPLADSARQLRWLSLDGHSVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CAA 90 bp ACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGACGATaGTCTTTTGTCCTGGAGCAGCCAGGACACCTCCCGTCACCGCTG +
Preference number: 2 (lower is better)
Translates to: TSSVQAWTTRHPQRR*SFVLEQPGHLPSPL
Trigger: CAGCGGTGACGGGAGGTGTCCTGGCTGCTCCAGGACAAAAGACAATCGTCTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGTTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: FGRLHGSRVWPRASCSASLEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR TCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGAATCCTTGGAGATGGTaGGACTCTACGACTGCTTTA +
Preference number: 2 (lower is better)
Translates to: PRPHAGTRQWPPASVSAENPWRW*DSTTAL
Trigger: TAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATT...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTACCTGTGGATTCCTCTaGAGGCCACGTGGCGGTCCT +
Preference number: 2 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSTCGFL*RPRGGP
Trigger: AGGACCGCCACGTGGCCTTCAGAGGAATCCACAGGT...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR GCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGTCCTTCGTGGCTGGTaGCCTCGCTCTGGCCACCGG +
Preference number: 2 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLVLRGW*PRSGHR
Trigger: CCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGAC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAG +
Preference number: 2 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPLWTAT*MAVTEQ
Trigger: CTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAG...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TCGCATCCCTGTCCATGCTGCACAGTTACATGGCCCCGTTACGGTGTGGTGACATCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: SHPCPCCTVTWPRYGVVTSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...TGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGCGTCCAGAGAACCCTaGGAGGGGGTGTGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSASREP*EGVWRG
Trigger: TCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGC...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR CAA 90 bp CTTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTaGTTCTGCCTCGGGGCACCCAGCATCACCTTGGCTTATACAAAT +
Preference number: 2 (lower is better)
Translates to: LLRPSAWFTGVAPRL*FCLGAPSITLAYTN
Trigger: ATTTGTATAAGCCAAGGTGATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CAA 90 bp GCCAGAATCTCTGAATTCTCACACCCGGGCCAGGCTCCCTGGCCCTaGTCATCTCTGGGCACCAACACTGCTGGGCAGAGCAAAACTGGG +
Preference number: 2 (lower is better)
Translates to: ARISEFSHPGQAPWP*SSLGTNTAGQSKTG
Trigger: CCCAGTTTTGCTCTGCCCAGCAGTGTTGGTGCCCAGAGATGACAAGGGCCAGGGAGCCTGGCCCGGGTGTGAGAATTCAGAGATTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp GGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCTTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: GQSGSGWDSCTRGLVKEGLEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 2 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGTTGATGGGGTGAAATaGTCCAGACTCCGACGTGGC +
Preference number: 2 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPVDGVK*SRLRRG
Trigger: GCCACGTCGGAGTCTGGAGCATTTCACCCCATCAAC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGAGTCGGAATGAACCATaGTGGGTGGGGAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: PLADSARQLRWLSLDGHLSRNEP*WVGRML
Trigger: CAGCATCCTCCCCACCCACCATGGTTCATTCCGACT...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 2 (lower is better)
Translates to: PRPHAGTRQWPPASVSAECFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CAA 90 bp CTGACCCAGGGGATGTTGTGGAAACGCGTGAGAAGGCCTGAGCAGTaGTGTTTGCAGATCCTGGATCCTTCCCGACACGCCAGCTGGCTC +
Preference number: 2 (lower is better)
Translates to: LTQGMLWKRVRRPEQ*CLQILDPSRHASWL
Trigger: GAGCCAGCTGGCGTGTCGGGAAGGATCCAGGATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCCCTGGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 90 bp GCAGGGTGCAGGGGCTCGATCCTCTGGGTTGAAGTCAGTGATATCTaGGGTCCCACTCATGAAGGGTCTGCCAGGCCCACAGAGGAGGAA +
Preference number: 2 (lower is better)
Translates to: AGCRGSILWVEVSDI*GPTHEGSARPTEEE
Trigger: TTCCTCCTCTGTGGGCCTGGCAGACCCTTCATGAGTGGGACCCAAGATATCACTGACTTCAACCCAGAGGATCGAGCCCCTGCACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 2 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 2 (lower is better)
Translates to: YPFPSATPRGHPAVATSFGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGCTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 2 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPLHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 2 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPRLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 2 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPCFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 2 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRAGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CAA 90 bp CAGGGGATGTTGTGGAAACGCGTGAGAAGGCCTGAGCAGTTGTGTTaGCAGATCCTGGATCCTTCCCGACACGCCAGCTGGCTCTTCTGC +
Preference number: 2 (lower is better)
Translates to: QGMLWKRVRRPEQLC*QILDPSRHASWLFC
Trigger: GCAGAAGAGCCAGCTGGCGTGTCGGGAAGGATCCAGGATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 2 (lower is better)
Translates to: FGRLHGSRVWPRASCSASGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGTGAGACTCTACGACTaGTTTAGGGACTTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSVRLYD*FRDFWD
Trigger: ATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCAC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCATCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGAGTCGGAATGAACCATaGTGGGTGGGGAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRSRNEP*WVGRML
Trigger: CAGCATCCTCCCCACCCACCATGGTTCATTCCGACT...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 2 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 2 (lower is better)
Translates to: HISAWRIQATGPRLPHIISVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp GCCTCCCCGTGGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGCTTATCACACGGTTTTaGTCCTTCACCAGATACTTA +
Preference number: 2 (lower is better)
Translates to: ASPWHVFSASLDHPAPTELITRF*SFTRYL
Trigger: TAAGTATCTGGTGAAGGACCAAAACCGTGTGATAAG...CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 90 bp CTGGAAATTCCTACGGGGTACCTGGTGGGTCTGACCCAGGGGATGTaGTGGAAACGCGTGAGAAGGCCTGAGCAGTTGTGTTTGCAGATC +
Preference number: 2 (lower is better)
Translates to: LEIPTGYLVGLTQGM*WKRVRRPEQLCLQI
Trigger: GATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCCCTGGGTCAGACCCACCAGGTACCCCGTAGGAATTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGACTCGGGTTTGCAAATaGGCTCAAATTTCAAAGCAA +
Preference number: 2 (lower is better)
Translates to: FGRLHGSRVWPRASCSASTRVCK*AQISKQ
Trigger: TTGCTTTGAAATTTGAGCTCATTTGCAAACCCGAGT...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGCGTCCAGAGAACCCTaGGAGGGGGTGTGGAGAGGA +
Preference number: 2 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLASREP*EGVWRG
Trigger: TCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAAATCCTTGGAGATGGTaGGACTCTACGACTGCTTTA +
Preference number: 2 (lower is better)
Translates to: NPQEERRDDCVVHPESQANPWRW*DSTTAL
Trigger: TAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATT...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR GCA 90 bp ACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCTGCTTAAATAGACTCTaGAGTCAATACGGTTACCAA +
Preference number: 2 (lower is better)
Translates to: TVSSIRSLRHRCGLVARSCLNRL*SQYGYQ
Trigger: TTGGTAACCGTATTGACTGCAGAGTCTATTTAAGCA...GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTGGCACGTCTTCAGTGCAAGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 2 (lower is better)
Translates to: SVGLSLLQEPPRGTSSVQDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...TTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 2 (lower is better)
Translates to: CPLADSARQLRWLSLDGHCFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCGCGATCCGCTGGGATTaGTCCCCAGGGCAGCCACGT +
Preference number: 2 (lower is better)
Translates to: HRSVILRGFFISTLRDKVAIRWD*SPGQPR
Trigger: ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGC...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR GCA 90 bp TGCCCCTGCCCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTAAGACCGTCCTTCTATaGGCCTCAAGCCCAATTTTC +
Preference number: 2 (lower is better)
Translates to: CPCPSASQRTTKDTLCKSKTVLL*ASSPIF
Trigger: GAAAATTGGGCTTGAGGCGCATAGAAGGACGGTCTT...AGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGGGCAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463591.1
3UTR-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 2 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 2 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSCFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR TCA 90 bp ACAAACACAAAAATGGAATGGAAGGAGCAGAGGAACTCTTCTAGGAAGAATGCAGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 2 (lower is better)
Translates to: TNTKMEWKEQRNSSRKNAGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...TGCATTCTTCCTAGAAGAGTTCCTCTGCTCCTTCCATTCCATTTTTGTGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR TCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 2 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR GCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGTGAGACTCTACGACTaGTTTAGGGACTTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWVRLYD*FRDFWD
Trigger: ATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCAC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAAGTCGGAATGAACCATaGTGGGTGGGGAGGATGCTG +
Preference number: 2 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRSRNEP*WVGRML
Trigger: CAGCATCCTCCCCACCCACCATGGTTCATTCCGACT...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCCGTCCACCTGCCCACTaGCTGATTCTGCGAGGCAGC +
Preference number: 2 (lower is better)
Translates to: HRSVILRGFFISTLRDKVRPPAH*LILRGS
Trigger: GCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACG...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp ATGTCCACACGTGACACAAACCCACACCAAGGCGGCTTGCACCACTCCTGTTTGATAATTGAGGGATCTTaGGTGGGGACCTGTGGATTC +
Preference number: 2 (lower is better)
Translates to: MSTRDTNPHQGGLHHSCLIIEGS*VGTCGF
Trigger: GAATCCACAGGTCCCCACCCAAGATCCCTCAATTAT...CAAACAGGAGTGGTGCAAGCCGCCTTGGTGTGGGTTTGTGTCACGTGTGGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 90 bp GCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTACGACTGCTTTAGGGACTTTTGGGAT +
Preference number: 2 (lower is better)
Translates to: ATCMAVTEQCSQDQS*EMVRLYDCFRDFWD
Trigger: ATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRLEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 2 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATLHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 2 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLLHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 2 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR TCA 90 bp TTAACCTCCAAATCGGCTTCTCCTAGGCTTTCTCTTAAGGAAATGTCTCTACACGGAGATGTCCACACGTaGCACAAACCCACACCAAGG +
Preference number: 2 (lower is better)
Translates to: LTSKSASPRLSLKEMSLHGDVHT*HKPTPR
Trigger: CCTTGGTGTGGGTTTGTGTCACGTGTGGACATCTCC...GTGTAGAGACATTTCCTTAAGAGAAAGCCTAGGAGAAGCCGATTTGGAGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp TTTCATGATTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCGATTTCATTGGGGCAGCATTTaGGCTGAACGGAAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: FHDFLHFTSYFILLPQRFHWGSI*AERKGP
Trigger: AGGGCCCTTCCGTTCAGCCCAAATGCTGCCCCAATG...AAATCGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 90 bp TCTTCTAGGAAGAATGCAAGGATGGTTTTGTCACAGTATCACTCATaGCTACAGAGACACAGTTTCATGGCTTTTGATACCCGGCTGACC +
Preference number: 2 (lower is better)
Translates to: SSRKNARMVLSQYHS*LQRHSFMAFDTRLT
Trigger: GGTCAGCCGGGTATCAAAAGCCATGAAACTGTGTCTCTGTAGCAATGAGTGATACTGTGACAAAACCATCCTTGCATTCTTCCTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CCA 90 bp TTAACCTCCAAATCGGCTTCTCCTAGGCTTTCTCTTAAGGAAATGTCTCTACACGGAAGAATGCAAGGATaGTTTTGTCACAGTATCACT +
Preference number: 2 (lower is better)
Translates to: LTSKSASPRLSLKEMSLHGRMQG*FCHSIT
Trigger: AGTGATACTGTGACAAAACCATCCTTGCATTCTTCC...GTGTAGAGACATTTCCTTAAGAGAAAGCCTAGGAGAAGCCGATTTGGAGGTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR GCA 90 bp TTTCATGATTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCGATTTTGCTTAAATAGACTCTaGAGTCAATACGGTTACCAA +
Preference number: 2 (lower is better)
Translates to: FHDFLHFTSYFILLPQRFCLNRL*SQYGYQ
Trigger: TTGGTAACCGTATTGACTGCAGAGTCTATTTAAGCA...AAATCGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp GCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTaGCCACCGGCCCCCGGCTGCCCAGCCCGTCAGAGG +
Preference number: 3 (lower is better)
Translates to: ARLRPSWLVPSL*PPAPGCPARQR
Trigger: CCTCTGACGGGCTGGGCAGCCGGGGGCCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR GCA 72 bp GGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTaGTCCCCAGGGCAGCCACGTGGAGGACACCGGAGC +
Preference number: 3 (lower is better)
Translates to: GAAWWPGAIRWD*SPGQPRGGHRS
Trigger: GCTCCGGTGTCCTCCACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 72 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTaGGTTCCCGCGTGGGGTGGCCGAGGCAGGGACAGA +
Preference number: 3 (lower is better)
Translates to: GRGQGPAFRGRR*VPAWGGRGRDR
Trigger: TCTGTCCCTGCCTCGGCCACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 72 bp AGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTaGAGGACACCGGAGCCGCTGGGGTCAGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: SDPLGLLPRAAT*RTPEPLGSGGR
Trigger: CCTCCCACCTGACCCCAGCGGCTCCGGTGTCCTCCACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CAA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTCTCCGTTGGCTGTCTTaGGACGGCCACCTGCATGGC +
Preference number: 3 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRLRWLS*DGHLHG
Trigger: GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAG...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 72 bp CGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTaGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGG +
Preference number: 3 (lower is better)
Translates to: RPSGVSGTGAAW*PGAIRWDCSPG
Trigger: CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CAA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTGCGAGGCAGCTCCGTaGGCTGTCTTTGGACGGCCA +
Preference number: 3 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQCEAAP*AVFGRP
Trigger: TGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCA...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR TCA 72 bp CACCGGCCCCCGGCTGCCCAGCCCGTCAGAGGTGGTTaGTGGGGTGAAATGCTCCAGACTCCGACGTGGCTC +
Preference number: 3 (lower is better)
Translates to: HRPPAAQPVRGG*WGEMLQTPTWL
Trigger: GAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAGCCGGGGGCCGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR CCA 72 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCT +
Preference number: 3 (lower is better)
Translates to: HSLPRPHAGTRQ*PPASVSAERPP
Trigger: AGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CAA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCTCCGTTGGCTGTCTTaGGACGGCCACCTGCATGGC +
Preference number: 3 (lower is better)
Translates to: TPVYPFPSATPRGHPAVALRWLS*DGHLHG
Trigger: GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CAA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTGTGGCCCCGCGCCTCTaGTTCTGCCTCGGGGCACCC +
Preference number: 3 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSVAPRL*FCLGAP
Trigger: GGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCAC...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 72 bp GCCCAGGGCGCCCTGCCTAAGACTTCTTCGGCCGTCTaGATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTT +
Preference number: 3 (lower is better)
Translates to: AQGALPKTSSAV*MVHGCGPAPLV
Trigger: AACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAAGTCTTAGGCAGGGCGCCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 72 bp GCCTCCTGCAGGAGCCTCCCCGTGGCACGTCTTCAGTaGAAGCCTGGACCACCCGGCACCCACAGAGACGAT +
Preference number: 3 (lower is better)
Translates to: ASCRSLPVARLQ*KPGPPGTHRDD
Trigger: ATCGTCTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp TGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTaGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCA +
Preference number: 3 (lower is better)
Translates to: CRPSGVSGTGAA*WPGAIRWDCSP
Trigger: TGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 72 bp ATCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTaGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCA +
Preference number: 3 (lower is better)
Translates to: IRRVEPPAGASP*HVFSASLDHPA
Trigger: TGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp GGCAGAGGACGCCAGGGCCCTTGGAATTTCCAGGGCTaGACTCTGGGGACGTGGAGGTCTTGGCCAGTCGGG +
Preference number: 3 (lower is better)
Translates to: GRGRQGPWNFQG*TLGTWRSWPVG
Trigger: CCCGACTGGCCAAGACCTCCACGTCCCCAGAGTCCAGCCCTGGAAATTCCAAGGGCCCTGGCGTCCTCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGCTCCGTTGGCTGTCTTaGGACGGCCACCTGCATGGC +
Preference number: 3 (lower is better)
Translates to: FGRLHGSRVWPRASCSASLRWLS*DGHLHG
Trigger: GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAG...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 72 bp ACGACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTaGGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTG +
Preference number: 3 (lower is better)
Translates to: TTVSSIRSLRHR*GLVARSDPLGL
Trigger: CAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTCGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 72 bp CCATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTaGCTCGTTGTGCAGATCTGGCGTGGGAGGAATCCC +
Preference number: 3 (lower is better)
Translates to: PWPQRTHRWVLS*LVVQIWRGRNP
Trigger: GGGATTCCTCCCACGCCAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 72 bp GGCTCCCTGGCCCTTGTCATCTCTGGGCACCAACACTaGTGGGCAGAGCAAAACTGGGAGGGCGAGGCTCGC +
Preference number: 3 (lower is better)
Translates to: GSLALVISGHQH*WAEQNWEGEAR
Trigger: GCGAGCCTCGCCCTCCCAGTTTTGCTCTGCCCAGCAGTGTTGGTGCCCAGAGATGACAAGGGCCAGGGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp AGGGCGCCCTGCCTAAGACTTCTTCGGCCGTCTGCATaGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGC +
Preference number: 3 (lower is better)
Translates to: RAPCLRLLRPSA*FTGVAPRLLFC
Trigger: GCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAAGTCTTAGGCAGGGCGCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 72 bp TGCACGCGTGGCCTTGTAAAGGAAGGCCTCTCCAGCTaGGCAGTCTCTCAGGCCACACCACGCCCACCCCAG +
Preference number: 3 (lower is better)
Translates to: CTRGLVKEGLSS*AVSQATPRPPQ
Trigger: CTGGGGTGGGCGTGGTGTGGCCTGAGAGACTGCCCAGCTGGAGAGGCCTTCCTTTACAAGGCCACGCGTGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTGCGAGGCAGCTCCGTaGGCTGTCTTTGGACGGCCA +
Preference number: 3 (lower is better)
Translates to: FFGRLHGSRVWPRASCSACEAAP*AVFGRP
Trigger: TGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCA...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 72 bp GTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTaGCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGG +
Preference number: 3 (lower is better)
Translates to: VATSFCLSRAST*PLADSARQLRW
Trigger: CCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCAC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR GCA 72 bp GAGGAGGGAAGGAAGATGGGTGCCCGGCCACATCTCTaGATGGCGGATCCAAGCCACAGGCCCTCGACTTCC +
Preference number: 3 (lower is better)
Translates to: EEGRKMGARPHL*MADPSHRPSTS
Trigger: GGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTGGCCGGGCACCCATCTTCCTTCCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 72 bp CGGTTAGGAAGACAGCCGAAAACGGCGGGATGGGACTaGGGGATCCGGAGACCAACGGTAAGGGCGGCTCTC +
Preference number: 3 (lower is better)
Translates to: RLGRQPKTAGWD*GIRRPTVRAAL
Trigger: GAGAGCCGCCCTTACCGTTGGTCTCCGGATCCCCCAGTCCCATCCCGCCGTTTTCGGCTGTCTTCCTAACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp CACACCCGGGCCAGGCTCCCTGGCCCTTGTCATCTCTaGGCACCAACACTGCTGGGCAGAGCAAAACTGGGA +
Preference number: 3 (lower is better)
Translates to: HTRARLPGPCHL*APTLLGRAKLG
Trigger: TCCCAGTTTTGCTCTGCCCAGCAGTGTTGGTGCCCAGAGATGACAAGGGCCAGGGAGCCTGGCCCGGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp GCCCCGTCGCATCCCTGTCCATGCTGCACAGTTACATaGCCCCGTTACGGTGTGGTGACAGCTGGAGGCCAG +
Preference number: 3 (lower is better)
Translates to: APSHPCPCCTVT*PRYGVVTAGGQ
Trigger: CTGGCCTCCAGCTGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGACGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp TGGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTaGCCTTGTAAAGGAAGGCCTCTCCAGCTGGGCAGT +
Preference number: 3 (lower is better)
Translates to: WPVGVWMGQLHA*PCKGRPLQLGS
Trigger: ACTGCCCAGCTGGAGAGGCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp TGGGGACGTGGAGGTCTTGGCCAGTCGGGGTCTGGATaGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGC +
Preference number: 3 (lower is better)
Translates to: WGRGGLGQSGSG*DSCTRGLVKEG
Trigger: GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCCAAGACCTCCACGTCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGTGCGAGGCAGCTCCGTaGGCTGTCTTTGGACGGCCA +
Preference number: 3 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPCEAAP*AVFGRP
Trigger: TGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCA...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR GCA 72 bp GCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTaGCTCGGGGCACCCAGCATCACCTTGGCTTATACA +
Preference number: 3 (lower is better)
Translates to: AWFTGVAPRLLF*LGAPSITLAYT
Trigger: TGTATAAGCCAAGGTGATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR GCA 72 bp TGGACACAGCCAGCTGCCCCGTCGCATCCCTGTCCATaGTGCACAGTTACATGGCCCCGTTACGGTGTGGTG +
Preference number: 3 (lower is better)
Translates to: WTQPAAPSHPCP*CTVTWPRYGVV
Trigger: CACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGACGGGGCAGCTGGCTGTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp AGGGAAGGAAGATGGGTGCCCGGCCACATCTCTGCATaGCGGATCCAAGCCACAGGCCCTCGACTTCCCCAT +
Preference number: 3 (lower is better)
Translates to: REGRWVPGHISA*RIQATGPRLPH
Trigger: ATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTGGCCGGGCACCCATCTTCCTTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CCA 72 bp ACAGGACGGTTAGGAAGACAGCCGAAAACGGCGGGATaGGACTGGGGGATCCGGAGACCAACGGTAAGGGCG +
Preference number: 3 (lower is better)
Translates to: TGRLGRQPKTAG*DWGIRRPTVRA
Trigger: CGCCCTTACCGTTGGTCTCCGGATCCCCCAGTCCCATCCCGCCGTTTTCGGCTGTCTTCCTAACCGTCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp ACTCTGGGGACGTGGAGGTCTTGGCCAGTCGGGGTCTaGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGA +
Preference number: 3 (lower is better)
Translates to: TLGTWRSWPVGV*MGQLHAWPCKG
Trigger: TCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCCAAGACCTCCACGTCCCCAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTAC +
Preference number: 3 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQSQDQS*EMVRLY
Trigger: GTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGA...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR TCA 72 bp GCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTaGCGACTGTGTCGTCCATCCGGAGTCTCAGGCACA +
Preference number: 3 (lower is better)
Translates to: AVSRQEPAGRAT*RLCRPSGVSGT
Trigger: TGTGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR TCA 72 bp TGTGCAGATCTGGCGTGGGAGGAATCCCTTTCACTGTaGTCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCC +
Preference number: 3 (lower is better)
Translates to: CADLAWEESLSL*SVGLSLLQEPP
Trigger: GGGAGGCTCCTGCAGGAGGCTCAACCCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 72 bp CGTTACGGTGTGGTGACAGCTGGAGGCCAGAATCTCTaGATTCTCACACCCGGGCCAGGCTCCCTGGCCCTT +
Preference number: 3 (lower is better)
Translates to: RYGVVTAGGQNL*ILTPGPGSLAL
Trigger: AAGGGCCAGGGAGCCTGGCCCGGGTGTGAGAATTCAGAGATTCTGGCCTCCAGCTGTCACCACACCGTAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 72 bp CAATCCAAGGAGTTAGCATTGGGGCAGCATTTGGGCTaGACGGAAGGGCCCTGGACCCCTGGCTTGCAGCCC +
Preference number: 3 (lower is better)
Translates to: QSKELALGQHLG*TEGPWTPGLQP
Trigger: GGGCTGCAAGCCAGGGGTCCAGGGCCCTTCCGTTCAGCCCAAATGCTGCCCCAATGCTAACTCCTTGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 72 bp ACACAGCCAGCTGCCCCGTCGCATCCCTGTCCATGCTaGACAGTTACATGGCCCCGTTACGGTGTGGTGACA +
Preference number: 3 (lower is better)
Translates to: TQPAAPSHPCPC*TVTWPRYGVVT
Trigger: TGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGACGGGGCAGCTGGCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTAC +
Preference number: 3 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWSQDQS*EMVRLY
Trigger: GTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGA...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR TCA 72 bp GACCTGTGGATTCCTCTGAAGGCCACGTGGCGGTCCTaGCACCAATTCCATGTCACACGAGGGCAGGCACAC +
Preference number: 3 (lower is better)
Translates to: DLWIPLKATWRS*HQFHVTRGQAH
Trigger: GTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGAATCCACAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR TCA 72 bp TGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTaGCCTTCAACCAAGCGTCCAGAGAACCCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: WGEMLQTPTWLQ*PSTKRPENPGR
Trigger: CCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR GCA 72 bp AGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTaGAGATCTGGCGTGGGAGGAATCCCTTTCACTGTG +
Preference number: 3 (lower is better)
Translates to: SARTGGSCLASL*RSGVGGIPFTV
Trigger: CACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp TGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCCGTCACTGAACAGTGT +
Preference number: 3 (lower is better)
Translates to: WLILRGSSVGCL*TATCMAVTEQC
Trigger: ACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CCA 72 bp AGAATCTCTGAATTCTCACACCCGGGCCAGGCTCCCTaGCCCTTGTCATCTCTGGGCACCAACACTGCTGGG +
Preference number: 3 (lower is better)
Translates to: RISEFSHPGQAP*PLSSLGTNTAG
Trigger: CCCAGCAGTGTTGGTGCCCAGAGATGACAAGGGCCAGGGAGCCTGGCCCGGGTGTGAGAATTCAGAGATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp GCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTaGGAGGGGGTGTGGAGAGGAGTGTCTTCGGAAAGG +
Preference number: 3 (lower is better)
Translates to: APVTFNQASREP*EGVWRGVSSER
Trigger: CCTTTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR TCA 72 bp AACGGTAAGGGCGGCTCTCATCGGTTCTGCTCCTGCTaGAAAGACACGCTGAGGGCTCCATCCGTCCGAATG +
Preference number: 3 (lower is better)
Translates to: NGKGGSHRFCSC*KDTLRAPSVRM
Trigger: CATTCGGACGGATGGAGCCCTCAGCGTGTCTTTTCAGCAGGAGCAGAACCGATGAGAGCCGCCCTTACCGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 72 bp CGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAGTGTTCTCAAGACCAA +
Preference number: 3 (lower is better)
Translates to: RGSSVGCLWTAT*MAVTEQCSQDQ
Trigger: TTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR GCA 72 bp CCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTaGAAATCTGAGCCCCAGAAGGGGACGGAAAGACCG +
Preference number: 3 (lower is better)
Translates to: PSASQRTTKDTL*KSEPQKGTERP
Trigger: CGGTCTTTCCGTCCCCTTCTGGGGCTCAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463591.1
3UTR CCA 72 bp CACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTaGCGTGGGAGGAATCCCTTTCACTGTGATCCGTCG +
Preference number: 3 (lower is better)
Translates to: HRWVLSCLVVQI*RGRNPFHCDPS
Trigger: CGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp ACGGGGTACCTGGTGGGTCTGACCCAGGGGATGTTGTaGAAACGCGTGAGAAGGCCTGAGCAGTTGTGTTTG +
Preference number: 3 (lower is better)
Translates to: TGYLVGLTQGML*KRVRRPEQLCL
Trigger: CAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCCCTGGGTCAGACCCACCAGGTACCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp CACAGTTACATGGCCCCGTTACGGTGTGGTGACAGCTaGAGGCCAGAATCTCTGAATTCTCACACCCGGGCC +
Preference number: 3 (lower is better)
Translates to: HSYMAPLRCGDS*RPESLNSHTRA
Trigger: GGCCCGGGTGTGAGAATTCAGAGATTCTGGCCTCCAGCTGTCACCACACCGTAACGGGGCCATGTAACTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp GGGGCTCGATCCTCTGGGTTGAAGTCAGTGATATCTTaGGTCCCACTCATGAAGGGTCTGCCAGGCCCACAG +
Preference number: 3 (lower is better)
Translates to: GARSSGLKSVIS*VPLMKGLPGPQ
Trigger: CTGTGGGCCTGGCAGACCCTTCATGAGTGGGACCCAAGATATCACTGACTTCAACCCAGAGGATCGAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTAC +
Preference number: 3 (lower is better)
Translates to: CPLADSARQLRWLSLDGHSQDQS*EMVRLY
Trigger: GTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CAA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCGTGGCCCCGCGCCTCTaGTTCTGCCTCGGGGCACCC +
Preference number: 3 (lower is better)
Translates to: HRSVILRGFFISTLRDKVVAPRL*FCLGAP
Trigger: GGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCAC...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 72 bp GACCCAGGGGATGTTGTGGAAACGCGTGAGAAGGCCTaGGCAGTTGTGTTTGCAGATCCTGGATCCTTCCCG +
Preference number: 3 (lower is better)
Translates to: DPGDVVETREKA*AVVFADPGSFP
Trigger: CGGGAAGGATCCAGGATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCCCTGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 72 bp GCTCTCATCGGTTCTGCTCCTGCTGAAAAGACACGCTaGGGGCTCCATCCGTCCGAATGTCCCACTTCAGAG +
Preference number: 3 (lower is better)
Translates to: ALIGSAPAEKTR*GLHPSECPTSE
Trigger: CTCTGAAGTGGGACATTCGGACGGATGGAGCCCTCAGCGTGTCTTTTCAGCAGGAGCAGAACCGATGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR GCA 72 bp AATTACGACTCTGACACCAGGGCTCAGCATCCCTCGTaGCGAAAGCGCAGTGGCAATGCACGTGACGCTGAA +
Preference number: 3 (lower is better)
Translates to: NYDSDTRAQHPS*RKRSGNARDAE
Trigger: TTCAGCGTCACGTGCATTGCCACTGCGCTTTCGGCACGAGGGATGCTGAGCCCTGGTGTCAGAGTCGTAATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp GCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTTCTCAAGACCAATCCT +
Preference number: 3 (lower is better)
Translates to: AAPLAVFGRPPA*PSLNSVLKTNP
Trigger: AGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR TCA 72 bp CATGCTGCACAGTTACATGGCCCCGTTACGGTGTGGTaGCAGCTGGAGGCCAGAATCTCTGAATTCTCACAC +
Preference number: 3 (lower is better)
Translates to: HAAQLHGPVTVW*QLEARISEFSH
Trigger: GTGTGAGAATTCAGAGATTCTGGCCTCCAGCTGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTAC +
Preference number: 3 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDSQDQS*EMVRLY
Trigger: GTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGA...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR-3UTR CAA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTAC +
Preference number: 3 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRSQDQS*EMVRLY
Trigger: GTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGA...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR-3UTR CAA 90 bp ATGTCCACACGTGACACAAACCCACACCAAGGCGGCTTGCACCACTCCTGTTTGGCACCCAGCATCACCTaGGCTTATACAAATAGGGAC +
Preference number: 3 (lower is better)
Translates to: MSTRDTNPHQGGLHHSCLAPSIT*AYTNRD
Trigger: GTCCCTATTTGTATAAGCCAAGGTGATGCTGGGTGC...CAAACAGGAGTGGTGCAAGCCGCCTTGGTGTGGGTTTGTGTCACGTGTGGACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTGCACCCAGCATCACCTaGGCTTATACAAATAGGGAC +
Preference number: 3 (lower is better)
Translates to: HISAWRIQATGPRLPHIIAPSIT*AYTNRD
Trigger: GTCCCTATTTGTATAAGCCAAGGTGATGCTGGGTGC...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR TCA 72 bp AAAGTCCATATACACACACGCTTTAAATTACGACTCTaGCACCAGGGCTCAGCATCCCTCGTGCCGAAAGCG +
Preference number: 3 (lower is better)
Translates to: KVHIHTRFKLRL*HQGSASLVPKA
Trigger: CGCTTTCGGCACGAGGGATGCTGAGCCCTGGTGTCAGAGTCGTAATTTAAAGCGTGTGTGTATATGGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp TTTCATGATTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCGATTTTGCTGTCTCTGCTCCTaGCGGCAGGTTCCCCCGACG +
Preference number: 3 (lower is better)
Translates to: FHDFLHFTSYFILLPQRFCCLCS*RQVPPT
Trigger: CGTCGGGGGAACCTGCCGCAAGGAGCAGAGACAGCA...AAATCGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp AAACAGAACAGAAGCAATTTACAATCAAGGGGGACATaGGGCGAGCGCCAGCCTCCTTCTCAATGGTCTTTT +
Preference number: 3 (lower is better)
Translates to: KQNRSNLQSRGT*GERQPPSQWSF
Trigger: AAAAGACCATTGAGAAGGAGGCTGGCGCTCGCCCCATGTCCCCCTTGATTGTAAATTGCTTCTGTTCTGTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR-3UTR CAA 90 bp TTTCATGATTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCGATTTGTAGGTTTCAGTCACTaGGGCAGGGGGACGGGACAG +
Preference number: 3 (lower is better)
Translates to: FHDFLHFTSYFILLPQRFVGFSH*GRGTGQ
Trigger: CTGTCCCGTCCCCCTGCCCAAGTGACTGAAACCTAC...AAATCGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR TCA 72 bp CTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTaGGACTCTACGACTGCTTTAGGGACTTTTGGGATC +
Preference number: 3 (lower is better)
Translates to: LNSVLKTNPWRW*DSTTALGTFGI
Trigger: GATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR CCA 72 bp ATTTCATTCTTCTCCCACAGCGATTTCCGTATTAATTaGGAACTGCGCCTCTTTCGCGTCAGCAGTTCAGGA +
Preference number: 3 (lower is better)
Translates to: ISFFSHSDFRIN*ELRLFRVSSSG
Trigger: TCCTGAACTGCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAAGAATGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CCA 72 bp GAGATGGTGAGACTCTACGACTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGGAAAAGTCGGAATGAA +
Preference number: 3 (lower is better)
Translates to: EMVRLYDCFRDF*DLSFHWKSRNE
Trigger: TTCATTCCGACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCACCATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
3UTR TCA 72 bp CTGAAGGCAATTGTTAGAATGACTTTTGTTCACAAGTaGATCACACGTTTGGAAACTCAAGCTGCCTTTTAT +
Preference number: 3 (lower is better)
Translates to: LKAIVRMTFVHK*ITRLETQAAFY
Trigger: ATAAAAGGCAGCTTGAGTTTCCAAACGTGTGATTCACTTGTGAACAAAAGTCATTCTAACAATTGCCTTCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCGTGGGCTTGGCCGCTaGCACCGCCAAGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVRGLGR*HRQGPR
Trigger: CCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCGTGGGCTTGGCCGCTaGCACCGCCAAGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPRGLGR*HRQGPR
Trigger: CCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGCACCTGCCCACTGGCTaGTTCTGCGAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPHLPTG*FCEAAP
Trigger: CGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTG...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGGTGAGGACCCCGGGGTaGTGGCTCACTGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPVRTPG*WLTGAF
Trigger: GAACGCACCAGTGAGCCAGCACCCCGGGGTCCTCAC...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGCCTCCCCCACAAGGCTaGAGTGCAGGGGCGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPPPPQG*SAGASS
Trigger: AGAGCTCGCCCCTGCACTGCAGCCTTGTGGGGGAGG...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTTGCACTCGTGGGCTTaGCCGCTGCCACCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPLHSWA*PLPPPR
Trigger: CCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTGTCCATCATGGGGCTaGGGGTCAAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPCPSWG*GSRAGP
Trigger: CGGGCCTGCCCTTGACCCCCAGCCCCATGATGGACA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGGGGAGCTTGGCGTCCTaGGTGTGGTTCAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPGSLAS*VWFRGL
Trigger: GAGCCCCCTGAACCACACCCAGGACGCCAAGCTCCC...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCCGAGCCCGTCCCCGTaGTCGTGTCCAGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVPSPSP*SCPGRS
Trigger: GGACCGACCTGGACACGACCACGGGGACGGGCTCGG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTGCGCTGGTCCCCAGGTaGTTCGTGAGGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPALVPR*FVRTPG
Trigger: CCCCGGGGTCCTCACGAACCACCTGGGGACCAGCGC...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCAAGGCCCTCGGGCTTaGGCTCCTCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVQGPRA*APQPGP
Trigger: AGGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCGAGGGCGTCCCGGGGTaGCTTTGGCTCGGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVEGVPG*LWLGLD
Trigger: GTCAAGGCCGAGCCAAAGTCACCCCGGGACGCCCTC...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCGTGGGCTTGGCCGCTaGCACCGCCAAGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GTGAAWWPGAIRWDCSPGRGLGR*HRQGPR
Trigger: CCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACG...CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCTCGGGCCCCGCAGCTaGCGTCGTGCCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAELGPRS*RRALAA
Trigger: AGCAGCCAGGGCACGACGGCAGCTGCGGGGCCCGAG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCTCGGGCCCCGCAGCTaGCGTCGTGCCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSLGPRS*RRALAA
Trigger: AGCAGCCAGGGCACGACGGCAGCTGCGGGGCCCGAG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCGTCACAGCGGAACGTaGGCTCCTCGTCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVRHSGT*APRPGR
Trigger: CCGGCCTGGACGAGGAGCCCACGTTCCGCTGTGACG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGGAGCGCAGCCCCCACTaGGCCACACGTGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPERSPH*ATRVLL
Trigger: AAGAAGTACACGTGTGGCTCAGTGGGGGCTGCGCTC...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTATGCTTGTGCTGCTTaGGGCCGGAGGACGTGGCGA +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPYACAA*GRRTWR
Trigger: TCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCACCTGCCCACTGGCTaGTTCTGCGAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPHLPTG*FCEAAP
Trigger: CGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTCCGCTCGCAGTCCTTaGACTCGTGGGCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVSARSP*TRGLGR
Trigger: GCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGCCCGAGCGCCCACGTaGTGCGAGCGGATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVARAPT*CERMCR
Trigger: GCGGCACATCCGCTCGCAGCACGTGGGCGCTCGGGC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCCGGCGGCGCCCGTTaGAGTCAGCAGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEPGGAR*SQQLLV
Trigger: GACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTGTGAGGACCCCGGGGTaGTGGCTCACTGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPVRTPG*WLTGAF
Trigger: GAACGCACCAGTGAGCCAGCACCCCGGGGTCCTCAC...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGGTGATGCAGCCTTCCTaGGGCGACACTTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPVMQPS*GDTSTS
Trigger: GGACGTGGAAGTGTCGCCCCAGGAAGGCTGCATCAC...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTTGCACTCGTGGGCTTaGCCGCTGCCACCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVLHSWA*PLPPPR
Trigger: CCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTCCGAGCCCGTCCCCGTaGTCGTGTCCAGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRPSPSP*SCPGRS
Trigger: GGACCGACCTGGACACGACCACGGGGACGGGCTCGG...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCGCCGCCGTTTTGGCTaGCACGGGCCCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLRRRFG*HGPGCR
Trigger: TCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCAGGACCCCGGGGTGCTaGCTCACTGGTGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVRTPGC*LTGAFS
Trigger: CGAGAACGCACCAGTGAGCCAGCACCCCGGGGTCCT...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTAGGACCCCGGGGTGCTaGCTCACTGGTGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPRTPGC*LTGAFS
Trigger: CGAGAACGCACCAGTGAGCCAGCACCCCGGGGTCCT...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGGGTTCCCGCGTGGGGTaGCCGAGGCAGGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: GTGAAWWPGAIRWDCSPGGSRVG*PRQGQR
Trigger: CCTCTGTCCCTGCCTCGGCCACCCCACGCGGGAACC...CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCACGCTGGGTTCCCGCGTaGGGTGGCCGAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSARWVPA*GGRGRD
Trigger: GTCCCTGCCTCGGCCACCCCACGCGGGAACCCAGCG...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTCAAGGCCCTCGGGCTTaGGCTCCTCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRQGPRA*APQPGP
Trigger: AGGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTG...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCGCTCCTCCGTGTGGATaGCCATGTGCTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVAPPCG*PCAAPG
Trigger: GCCTGGAGCAGCACATGGTCATCCACACGGAGGAGC...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCCTGGCTGCTGTTGCTaGCGGCGGAGACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSPGCCC*RRRPGA
Trigger: TGCCCCTGGTCTCCGCCGTCAGCAACAGCAGCCAGG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCTGGCTGCTGTTGCTaGCGGCGGAGACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEPGCCC*RRRPGA
Trigger: TGCCCCTGGTCTCCGCCGTCAGCAACAGCAGCCAGG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGAGGGCGTCCCGGGGTaGCTTTGGCTCGGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEEGVPG*LWLGLD
Trigger: GTCAAGGCCGAGCCAAAGTCACCCCGGGACGCCCTC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGAGGGCGTCCCGGGGTaGCTTTGGCTCGGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSEGVPG*LWLGLD
Trigger: GTCAAGGCCGAGCCAAAGTCACCCCGGGACGCCCTC...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGCCGGGCGGCACTGTaGCCAGGGGGTAGACGCCTT +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAGRAAL*PGGRRL
Trigger: AAGGCGTCTACCCCCTGGGCACAGTGCCGCCCGGCC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGCCCGAGCGCCCACGTaGTGCGAGCGGATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFARAPT*CERMCR
Trigger: GCGGCACATCCGCTCGCAGCACGTGGGCGCTCGGGC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCCCGGCGGCGCCCGTTaGAGTCAGCAGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVPGGAR*SQQLLV
Trigger: GACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCCCGGCGGCGCCCGTTaGAGTCAGCAGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQPGGAR*SQQLLV
Trigger: GACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGG...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCTCAGGTCCAGCGGCTaGTCCTCGCCGGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLLRSSG*SSPDAG
Trigger: CCCCGCATCCGGCGAGGAGCAGCCGCTGGACCTGAG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGGGCCCGGCTGCCGATaGTCAGGTCCAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVGPGCR*SGPAAA
Trigger: AGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTGGCACGGGCCCGGCTaGCGATGCTCAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCWHGPG*RCSGPA
Trigger: CGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCTGGCACGGGCCCGGCTaGCGATGCTCAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPWHGPG*RCSGPA
Trigger: CGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCA...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCATAGACGTGGTTCTTaGGGGGCTCCCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEHRRGS*GAPARR
Trigger: GCGGCGGGCGGGAGCCCCGCAAGAACCACGTCTATG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTCGTGCTTCTTGAGGTaGCGGTCCAGGTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPSCFLR*RSRLVC
Trigger: GCAGACCAACCTGGACCGGCACCTCAAGAAGCACGA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGCTGGACACTGGGCACTaGCGTCCACGATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPLDTGH*RPRSAC
Trigger: ACATGCAGATCGTGGACGGCAGTGCCCAGTGTCCAG...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCGACACGGTGTCATCCTaGGACTTCCCGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVDTVSS*DFPARL
Trigger: CAGCCTGGCCGGGAAGTCGCAGGATGACACCGTGTC...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCTTCCTCAGCTGCTCTaGGGAGGTCCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPLPQLL*GGPAPS
Trigger: GGAAGGGGCTGGACCTCCGCAGAGCAGCTGAGGAAG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR GCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGACTTCTTCGGCCGTCTaGATGGTTCACGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPTSSAV*MVHGCG
Trigger: GCCACACCCGTGAACCATGCAGACGGCCGAAGAAGT...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCCTCCGCGCTGTGGCTaGCCAGCAGGTCCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPPPRCG*PAGPGW
Trigger: CCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCGGGGACTGGGGAGCTTaGCGTCCTGGGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVGDWGA*RPGCGS
Trigger: TGAACCACACCCAGGACGCCAAGCTCCCCAGTCCCC...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGAGCCGCCCCCAAACTTaGGCTGGCCCTCGGCGGACT +
Preference number: 4 (lower is better)
Translates to: GTGAAWWPGAIRWDCSPGSRPQT*AGPRRT
Trigger: AGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCT...CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTCTATGGCTGACATCTaGGGGTGGAAGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPSMADI*GWKSSG
Trigger: CCCGCTGCTCTTCCACCCCCAGATGTCAGCCATAGA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGCGCTGGTCCCCAGGTaGTTCGTGAGGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQALVPR*FVRTPG
Trigger: CCCCGGGGTCCTCACGAACCACCTGGGGACCAGCGC...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCGCTAGGCCTGGACACTaGGCACTGCCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVARPGH*ALPSTI
Trigger: GATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGC...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCGCGTCCAGAGAACCCTaGGAGGGGGTGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVASREP*EGVWRG
Trigger: TCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGC...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGGACACCGGAGCCGCTaGGGTCAGGTGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQGHRSR*GQVGGG
Trigger: CCCACCTCCCACCTGACCCCAGCGGCTCCGGTGTCC...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCCCAGGGCAGCCACGTaGAGGACACCGGAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLPRAAT*RTPEPL
Trigger: CAGCGGCTCCGGTGTCCTCCACGTGGCTGCCCTGGG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
3UTR CAA 72 bp AGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATaGCTCCCCAGGGCAGCCACGTGGAGGACACCGGAG +
Preference number: 4 (lower is better)
Translates to: RCGLVARSDPLG*LPRAATWRTPE
Trigger: CTCCGGTGTCCTCCACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCCACACGGATGTACTTaGGCCAGCTGCCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: GTGAAWWPGAIRWDCSPGPHGCT*ASCQPP
Trigger: CGGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGG...CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTATGCTTGTGCTGCTTaGGGCCGGAGGACGTGGCGA +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVYACAA*GRRTWR
Trigger: TCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCCTGGCTGCTGTTGCTaGCGGCGGAGACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLPGCCC*RRRPGA
Trigger: TGCCCCTGGTCTCCGCCGTCAGCAACAGCAGCCAGG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCTGGATGCGATGGCCTTaGTGGAGTCCCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPWMRWP*WSPRRR
Trigger: GCGCCGCCGGGGACTCCATCAAGGCCATCGCATCCA...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTGGATGCGATGGCCTTaGTGGAGTCCCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCWMRWP*WSPRRR
Trigger: GCGCCGCCGGGGACTCCATCAAGGCCATCGCATCCA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCTGGATGCGATGGCCTTaGTGGAGTCCCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLWMRWP*WSPRRR
Trigger: GCGCCGCCGGGGACTCCATCAAGGCCATCGCATCCA...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCGAGGGCTCGGTCCGTaGAGGGGTAAAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSRGLGP*RGKGSG
Trigger: CCCACTCCCTTTACCCCTTCACGGACCGAGCCCTCG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGAGGGCTCGGTCCGTaGAGGGGTAAAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAERGLGP*RGKGSG
Trigger: CCCACTCCCTTTACCCCTTCACGGACCGAGCCCTCG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCGAGGGCGTCCCGGGGTaGCTTTGGCTCGGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPEGVPG*LWLGLD
Trigger: GTCAAGGCCGAGCCAAAGTCACCCCGGGACGCCCTC...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTCACCTGCCCACTGGCTaGTTCTGCGAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGHLPTG*FCEAAP
Trigger: CGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTG...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GCCTCCCCGTGGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGGGCCGGGCGGCACTGTaGCCAGGGGGTAGACGCCTT +
Preference number: 4 (lower is better)
Translates to: ASPWHVFSASLDHPAPTEGRAAL*PGGRRL
Trigger: AAGGCGTCTACCCCCTGGGCACAGTGCCGCCCGGCC...CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGTGCGGCAGTCGGCGTaGATCCGCTTGTGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLVRQSA*IRLCRH
Trigger: GTGCCGGCACAAGCGGATGCACGCCGACTGCCGCAC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGGCCCGGGGCAAAGATaGCGCCCGGCGTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEGPGQR*RPACNG
Trigger: ACCATTACACGCCGGGCGGCATCTTTGCCCCGGGCC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCTCAGGTCCAGCGGCTaGTCCTCGCCGGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVALRSSG*SSPDAG
Trigger: CCCCGCATCCGGCGAGGAGCAGCCGCTGGACCTGAG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGGGCCCGGCTGCCGATaGTCAGGTCCAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAGPGCR*SGPAAA
Trigger: AGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGGCACGGGCCCGGCTaGCGATGCTCAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFWHGPG*RCSGPA
Trigger: CGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCA...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCATAGACGTGGTTCTTaGGGGGCTCCCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPHRRGS*GAPARR
Trigger: GCGGCGGGCGGGAGCCCCGCAAGAACCACGTCTATG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTAGCAGAGCGTCCACCTaGCCACTGGCTGATTCTGCG +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPSRAST*PLADSA
Trigger: CGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCT...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCCGCGCCTCTTGTTCTaGCTCGGGGCACCCAGCATC +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSPRLLF*LGAPSI
Trigger: GATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCAGCCCAGGGCGCCCTaGCTAAGACTTCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSQPRAP*LRLLRP
Trigger: CGGCCGAAGAAGTCTTAGGCAGGGCGCCCTGGGCTG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCCTCCGCGCTGTGGCTaGCCAGCAGGTCCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAPPRCG*PAGPGW
Trigger: CCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTCGTCCTCCGCGCTGTaGCTGGCCAGCAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLSSSAL*LASRSR
Trigger: CCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACGA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTCGGGGATGGGCGACATaGCACTGTCCTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRRGWAT*HCPRPR
Trigger: ACGAGGCCGAGGACAGTGCCATGTCGCCCATCCCCG...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCGTCACAGCGGAACGTaGGCTCCTCGTCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLRHSGT*APRPGR
Trigger: CCGGCCTGGACGAGGAGCCCACGTTCCGCTGTGACG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTCAGTCCTTGCACTCGTaGGCTTGGCCGCTGCCACCG +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRQSLHS*AWPLPP
Trigger: CGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTG...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGTGTCCATCATGGGGCTaGGGGTCAAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAECPSWG*GSRAGP
Trigger: CGGGCCTGCCCTTGACCCCCAGCCCCATGATGGACA...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCCGGGGGTACAAGGATaGAGGGAAGATGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPPGVQG*REDARE
Trigger: TTCCCGGGCATCTTCCCTCCATCCTTGTACCCCCGG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGTTCCCCAGGGGACTaGGGAGCTTGGCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAGSPGD*GAWRPG
Trigger: CCCAGGACGCCAAGCTCCCCAGTCCCCTGGGGAACC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGGTTCCCCAGGGGACTaGGGAGCTTGGCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVGSPGD*GAWRPG
Trigger: CCCAGGACGCCAAGCTCCCCAGTCCCCTGGGGAACC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCGCCCCCAAACTTaGGCTGGCCCTCGGCGGACT +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQSRPQT*AGPRRT
Trigger: AGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCT...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGGTGCCGGTCCAGGTTaGTCTGCTGCCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEGAGPG*SAARSS
Trigger: GCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCCTCCTGCTTCTCACTaGCTAGGCCTGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVPPASH*LGLDTG
Trigger: CCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCTCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVSVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCACAGGTGCGGCTTGGTaGCCCGGAGCGATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLTGAAW*PGAIRW
Trigger: CCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGT...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGTCGGGGCCGTGTTTTaGGGCGCACCAGCCCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEVGAVF*GAPAQE
Trigger: TTCCTGGGCTGGTGCGCCCCAAAACACGGCCCCGAC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTTGGCCAGTCGGGGTCTaGATGGGACAGCTGCACGCG +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGWPVGV*MGQLHA
Trigger: CGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCCA...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAAGCCCTCCTTGGGGGTaGAGTCCTCGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSASPPWG*SPRWWG
Trigger: TCCCCACCAGCGAGGACTTCACCCCCAAGGAGGGCT...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCAGCCCTCCTTGGGGGTaGAGTCCTCGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVSPPWG*SPRWWG
Trigger: TCCCCACCAGCGAGGACTTCACCCCCAAGGAGGGCT...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCTGCCAGCCCCCGCCTaGTTTGCATCCACGCAGAAC +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSLPAPA*FASTQN
Trigger: GTTCTGCGTGGATGCAAATCAGGCGGGGGCTGGCAG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCACCACACGGATGTACTTaGGCCAGCTGCCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAPHGCT*ASCQPP
Trigger: CGGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGG...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGAGCGGATGTGCCGCTaGAGGTTGCTGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCERMCR*RLLGSV
Trigger: CACGGACCCCAGCAACCTTCAGCGGCACATCCGCTC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGGATGCGATGGCCTTaGTGGAGTCCCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFWMRWP*WSPRRR
Trigger: GCGCCGCCGGGGACTCCATCAAGGCCATCGCATCCA...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTTCTCCTGCATCCCCATaGAGCCGGGGCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPSPASP*SRGQST
Trigger: AGTACTTTGGCCCCGGCTTCATGGGGATGCAGGAGA...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGAGGGCGTCCCGGGGTaGCTTTGGCTCGGCCTTGAC +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWEGVPG*LWLGLD
Trigger: GTCAAGGCCGAGCCAAAGTCACCCCGGGACGCCCTC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTGTAGATGGGGTCCATaGAGAAGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVCRWGP*RRARAW
Trigger: CCAAGCCCTCGCCCTTCTTCATGGACCCCATCTACA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCACCTGCCCACTGGCTaGTTCTGCGAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCHLPTG*FCEAAP
Trigger: CGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTG...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGGGCGGCACTGTaGCCAGGGGGTAGACGCCTT +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSGRAAL*PGGRRL
Trigger: AAGGCGTCTACCCCCTGGGCACAGTGCCGCCCGGCC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGGTGCGGCAGTCGGCGTaGATCCGCTTGTGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPVRQSA*IRLCRH
Trigger: GTGCCGGCACAAGCGGATGCACGCCGACTGCCGCAC...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGTGCGGCAGTCGGCGTaGATCCGCTTGTGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLVRQSA*IRLCRH
Trigger: GTGCCGGCACAAGCGGATGCACGCCGACTGCCGCAC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGCCCGGGGCAAAGATaGCGCCCGGCGTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAGPGQR*RPACNG
Trigger: ACCATTACACGCCGGGCGGCATCTTTGCCCCGGGCC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATGGGCCCGGCTGCCGATaGTCAGGTCCAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHGPGCR*SGPAAA
Trigger: AGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCC...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCATAGACGTGGTTCTTaGGGGGCTCCCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPHRRGS*GAPARR
Trigger: GCGGCGGGCGGGAGCCCCGCAAGAACCACGTCTATG...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCATAGACGTGGTTCTTaGGGGGCTCCCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWHRRGS*GAPARR
Trigger: GCGGCGGGCGGGAGCCCCGCAAGAACCACGTCTATG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGGTCCAGGTTGGTCTaGTGCCCGAAGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAERSRLV*CPKQRL
Trigger: CAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCGTGAGGACCCCGGGGTaGTGGCTCACTGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPVRTPG*WLTGAF
Trigger: GAACGCACCAGTGAGCCAGCACCCCGGGGTCCTCAC...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTGGACACTGGGCACTaGCGTCCACGATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVLDTGH*RPRSAC
Trigger: ACATGCAGATCGTGGACGGCAGTGCCCAGTGTCCAG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCAGCCCAGGGCGCCCTaGCTAAGACTTCTTCGGCCG +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVQPRAP*LRLLRP
Trigger: CGGCCGAAGAAGTCTTAGGCAGGGCGCCCTGGGCTG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTGAGTGGGGAAGAAGTTaGGTCCCAAGAGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPEWGRS*VPREGG
Trigger: GCCTCCCTCTCTTGGGACGCAACTTCTTCCCCACTC...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGGCCAGCCCCTGGGATaGAGGACTCTCGGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCGQPLG*RTLGAR
Trigger: TCGAGCTCCGAGAGTCCTCCATCCCAGGGGCTGGCC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGGCCAGCCCCTGGGATaGAGGACTCTCGGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVGQPLG*RTLGAR
Trigger: TCGAGCTCCGAGAGTCCTCCATCCCAGGGGCTGGCC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCACATGGTGAGGTTCTaGTCATCGCAGGAGCACGCC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPHMVRF*SSQEHA
Trigger: GGCGTGCTCCTGCGATGACCAGAACCTCACCATGTG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATGTCCATCATGGGGCTaGGGGTCAAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSACPSWG*GSRAGP
Trigger: CGGGCCTGCCCTTGACCCCCAGCCCCATGATGGACA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGCTGCCGTCGTGCCCTaGCTGCTGTTGCTGACGGCG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWAAVVP*LLLLTA
Trigger: CGCCGTCAGCAACAGCAGCCAGGGCACGACGGCAGC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGCTGCCGTCGTGCCCTaGCTGCTGTTGCTGACGGCG +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFAAVVP*LLLLTA
Trigger: CGCCGTCAGCAACAGCAGCCAGGGCACGACGGCAGC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGCTGCCGTCGTGCCCTaGCTGCTGTTGCTGACGGCG +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAAAVVP*LLLLTA
Trigger: CGCCGTCAGCAACAGCAGCCAGGGCACGACGGCAGC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGAAGGGCGAGGGCTTaGCGTAGTGGAGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLRRARA*RSGAGA
Trigger: AGCCCCCGCTCCACTACGCCAAGCCCTCGCCCTTCT...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCCGAGTCCGCCTTCATaGCTGCAAAGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPPSPPS*LQSSPA
Trigger: AGCTGGAGAGCTTTGCAGCCATGAAGGCGGACTCGG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGGAGAGCGTTGGGGGTaGGGACCGGAAGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEGERWG*GPEVEG
Trigger: CCCTTCAACTTCCGGTCCCCACCCCCAACGCTCTCC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTTCCGGACGTGCCGCTaGAGGTTCGAAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVFRTCR*RFEEML
Trigger: CAGCATCTCTTCGAACCTCCAGCGGCACGTCCGGAA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTGGCTTCTCCTTGTTGTaGATGTTCCGGACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPGFSLL*MFRTCR
Trigger: GCGGCACGTCCGGAACATCCACAACAAGGAGAAGCC...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGGTGCCGGTCCAGGTTaGTCTGCTGCCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLGAGPG*SAARSS
Trigger: GCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCTCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLAGTRQ*PPASVS
Trigger: TGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCTTCGGCCGTCTGCATaGTTCACGGGTGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQLRPSA*FTGVAP
Trigger: CGGGGCCACACCCGTGAACCATGCAGACGGCCGAAG...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCTTCGGCCGTCTGCATaGTTCACGGGTGTGGCCCCG +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVLRPSA*FTGVAP
Trigger: CGGGGCCACACCCGTGAACCATGCAGACGGCCGAAG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATGGACACCGGAGCCGCTaGGGTCAGGTGGGAGGTGGG +
Preference number: 4 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDGHRSR*GQVGGG
Trigger: CCCACCTCCCACCTGACCCCAGCGGCTCCGGTGTCC...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGCCCAGGGCAGCCACGTaGAGGACACCGGAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: FGRLHGSRVWPRASCSASPRAAT*RTPEPL
Trigger: CAGCGGCTCCGGTGTCCTCCACGTGGCTGCCCTGGG...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTGCAGGAGCCTCCCCGTaGCACGTCTTCAGTGCAAGC +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRAGASP*HVFSAS
Trigger: GCTTGCACTGAAGACGTGCCACGGGGAGGCTCCTGC...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAAGGCTCGCTGGGGCCTaGGGCCACACTAAGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSARLAGA*GHTKCR
Trigger: CCGACACTTAGTGTGGCCCCAGGCCCCAGCGAGCCT...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCCTGGCCACCTGGCCATaGACACAGCCAGCTGCCCCG +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFLATWP*TQPAAP
Trigger: CGGGGCAGCTGGCTGTGTCCATGGCCAGGTGGCCAG...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCTGCCAGCCCCCGCCTaGTTTGCATCCACGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVLPAPA*FASTQN
Trigger: GTTCTGCGTGGATGCAAATCAGGCGGGGGCTGGCAG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACACGGATGTACTTaGGCCAGCTGCCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWPHGCT*ASCQPP
Trigger: CGGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGAGCGGATGTGCCGCTaGAGGTTGCTGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAERMCR*RLLGSV
Trigger: CACGGACCCCAGCAACCTTCAGCGGCACATCCGCTC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGAGCGGATGTGCCGCTaGAGGTTGCTGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFERMCR*RLLGSV
Trigger: CACGGACCCCAGCAACCTTCAGCGGCACATCCGCTC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTTATGCTTGTGCTGCTTaGGGCCGGAGGACGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGYACAA*GRRTWR
Trigger: TCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATA...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTTGGATGCGATGGCCTTaGTGGAGTCCCCGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSWMRWP*WSPRRR
Trigger: GCGCCGCCGGGGACTCCATCAAGGCCATCGCATCCA...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCACGTGCTCGTGCTTCTTaGGGTGCCGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSARARAS*GAGPGW
Trigger: CCAACCTGGACCGGCACCTCAAGAAGCACGAGCACG...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGGTACCTGGTGGGTCTaGCCCAGGGGATGTTGTGGA +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSGTWWV*PRGCCG
Trigger: TCCACAACATCCCCTGGGTCAGACCCACCAGGTACC...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCCGGCTGACCTCCACTaGCCAGGAGCAGCTATGTCC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVPADLH*PGAAMS
Trigger: GGACATAGCTGCTCCTGGTCAGTGGAGGTCAGCCGG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGCCGGGCGGCACTGTaGCCAGGGGGTAGACGCCTT +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGRAAL*PGGRRL
Trigger: AAGGCGTCTACCCCCTGGGCACAGTGCCGCCCGGCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTCCGCTCGCAGTCCTTaGACTCGTGGGCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLSARSP*TRGLGR
Trigger: GCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGCCCGAGCGCCCACGTaGTGCGAGCGGATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGARAPT*CERMCR
Trigger: GCGGCACATCCGCTCGCAGCACGTGGGCGCTCGGGC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGTCCTTGCACTTGATCTaGGTGCGGCAGTCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAESLHLI*VRQSAC
Trigger: GCACGCCGACTGCCGCACGCAGATCAAGTGCAAGGA...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCCCGGCGGCGCCCGTTaGAGTCAGCAGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATPGGAR*SQQLLV
Trigger: GACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCCGCCGGCGCCCAGCTTaGGTTCCCCATAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFRRRPA*VPHRRG
Trigger: ACCACGTCTATGGGGAACGCAAGCTGGGCGCCGGCG...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGGGGGCTGCAGGGAGCTaGCCGAGTCCGCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGGAAGS*PSPPSW
Trigger: CCATGAAGGCGGACTCGGGCAGCTCCCTGCAGCCCC...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
68% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTTCCAGGTTGGTCTGCTaGCCGAAGCAGCGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGSRLVC*PKQRLH
Trigger: GTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGA...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCTCCAGGTTGGTCTGCTaGCCGAAGCAGCGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSSRLVC*PKQRLH
Trigger: GTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGA...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCGGTCCAGGTTGGTCTaGTGCCCGAAGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPRSRLV*CPKQRL
Trigger: CAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTGCGTTCTCGTGCTCGTaGTTCTTGAGGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRAFSCS*FLRCRS
Trigger: GGACCGGCACCTCAAGAAGCACGAGCACGAGAACGC...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGGTCCTTCGTGGCTGGTaGCCTCGCTCTGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGVLRGW*PRSGHR
Trigger: CCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGAC...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTAGCAGAGCGTCCACCTaGCCACTGGCTGATTCTGCG +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGSRAST*PLADSA
Trigger: CGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCT...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCATGGACACAGCCAGCTaGCCCGTCGCATCCCTGTCC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLMDTAS*PVASLS
Trigger: GGACAGGGATGCGACGGGGCAGCTGGCTGTGTCCAT...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCCTCCGCGCTGTGGCTaGCCAGCAGGTCCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATPPRCG*PAGPGW
Trigger: CCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTCGTCCTCCGCGCTGTaGCTGGCCAGCAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATSSSAL*LASRSR
Trigger: CCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACGA...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGTGGCCCCACGGGGATaGGCGACATGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAVAPRG*ATWHCP
Trigger: AGGACAGTGCCATGTCGCCCATCCCCGTGGGGCCAC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGGCCAGCCCCTGGGATaGAGGACTCTCGGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLGQPLG*RTLGAR
Trigger: TCGAGCTCCGAGAGTCCTCCATCCCAGGGGCTGGCC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGTGATGCAGCCTTCCTaGGGCGACACTTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEVMQPS*GDTSTS
Trigger: GGACGTGGAAGTGTCGCCCCAGGAAGGCTGCATCAC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCAGTCCTTGCACTCGTaGGCTTGGCCGCTGCCACCG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWQSLHS*AWPLPP
Trigger: CGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTAAGGCCTTGGGACACTaGTCGCATTTGTACTCGCGC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPKALGH*SHLYSR
Trigger: GCGCGAGTACAAATGCGACCAGTGTCCCAAGGCCTT...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTGTGCCGGCACAGGTTaGAGAACTGCGTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVCAGTG*RTACRT
Trigger: AGTCCTACACGCAGTTCTCCAACCTGTGCCGGCACA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCCGGGGGTACAAGGATaGAGGGAAGATGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSPGVQG*REDARE
Trigger: TTCCCGGGCATCTTCCCTCCATCCTTGTACCCCCGG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCTTGGCGTCCTGGGTGTaGTTCAGGGGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSLASWV*FRGLLS
Trigger: GCTCAAGAGCCCCCTGAACCACACCCAGGACGCCAA...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGCGCCGCCGTTTTGGCTaGCACGGGCCCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPRRRFG*HGPGCR
Trigger: TCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCG...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGGAGAGCGTTGGGGGTaGGGACCGGAAGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLGERWG*GPEVEG
Trigger: CCCTTCAACTTCCGGTCCCCACCCCCAACGCTCTCC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCGCGCTGGTCCCCAGGTaGTTCGTGAGGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSAALVPR*FVRTPG
Trigger: CCCCGGGGTCCTCACGAACCACCTGGGGACCAGCGC...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATGTCCGACTCTGAGGTaGGAGAGGACGCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSACPTLR*ERTRWS
Trigger: GGACCAGCGCGTCCTCTCCCACCTCAGAGTCGGACA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGCACACCTTCGGGTGTaGTCAAAGCCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQAHLRV*SKPTAR
Trigger: CCTGGCCGTGGGCTTTGACCACACCCGAAGGTGTGC...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR CCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPERLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCGTCCACCTGCCCACTaGCTGATTCTGCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQRPPAH*LILRGS
Trigger: GCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACG...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCGTCCACCTGCCCACTaGCTGATTCTGCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPRPPAH*LILRGS
Trigger: GCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCCGGAGCGATCCGCTaGGATTGCTCCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDPGAIR*DCSPGQ
Trigger: CTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGG...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCGGCACAGGTGCGGCTTaGTGGCCCGGAGCGATCCGC +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSAGTGAA*WPGAIR
Trigger: GCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTGGCACGTCTTCAGTGCAACGGCTCGCTGGGGGCTaGGGTCTGAGGAGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: SVGLSLLQEPPRGTSSVQRLAGG*GLRSSG
Trigger: TCCGCTGCTCCTCAGACCCCAGCCCCCAGCGAGCCG...TTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGGACGTGGAGGTCTTaGCCAGTCGGGGTCTGGATG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAGTWRS*PVGVWM
Trigger: CATCCAGACCCCGACTGGCCAAGACCTCCACGTCCC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 72 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTaGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VSSIRSLRHRCG*VARSDPLGLLP
Trigger: GGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGTGCTCGTGCTTCTTaGGGTGCCGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLRARAS*GAGPGW
Trigger: CCAACCTGGACCGGCACCTCAAGAAGCACGAGCACG...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVLHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCCCGTTACGGTGTGGTaGCAGCTGGAGGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPPVTVW*QLEARI
Trigger: GATTCTGGCCTCCAGCTGTCACCACACCGTAACGGG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGGAAGTCTGTCTCCTTTaGCGCCGCCCGGGGCACCAC +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPEEVCLL*RRPGHH
Trigger: GTGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTC...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCGCAGAACTTCTCACTaGCCAGGTCTTCGGAGATCT +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVRRTSH*PGLRRS
Trigger: AGATCTCCGAAGACCTGGGCAGTGAGAAGTTCTGCG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTTCCGCTCGCAGTCCTTaGACTCGTGGGCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSSARSP*TRGLGR
Trigger: GCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGA...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAGCCCGAGCGCCCACGTaGTGCGAGCGGATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQAARAPT*CERMCR
Trigger: GCGGCACATCCGCTCGCAGCACGTGGGCGCTCGGGC...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CCAGACTCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGCTCGGGCCCCGCAGCTaGCGTCGTGCCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PDSDVAPVTFNQASREPWLGPRS*RRALAA
Trigger: AGCAGCCAGGGCACGACGGCAGCTGCGGGGCCCGAG...CCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTCGTCCTCAAAGTCACTaGCGTCCGACATGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRRPQSH*RPTCRC
Trigger: GCAGCGACATGTCGGACGGCAGTGACTTTGAGGACG...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCACGGCGGACTTGCCCTTaGCCTTGTCCTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSARRTCP*PCPCQG
Trigger: ACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCG...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCGGCGGACTTGCCCTTaGCCTTGTCCTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCRRTCP*PCPCQG
Trigger: ACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCG...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTTCTCGGCAATGGATaGGATGGCCTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVLLGNG*DGLDGV
Trigger: GACTCCATCAAGGCCATCGCATCCATTGCCGAGAAG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGTGGCACGGGCCCGGCTaGCGATGCTCAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLWHGPG*RCSGPA
Trigger: CGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCA...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGGGCTGCAGGGAGCTaGCCGAGTCCGCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGAAGS*PSPPSW
Trigger: CCATGAAGGCGGACTCGGGCAGCTCCCTGCAGCCCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTTCTTCCCACAGTACCTaGACGTGTATCGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPSSHST*TCIAPC
Trigger: GCAAGGAGCGATACACGTGCAGGTACTGTGGGAAGA...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATCCAGGTTGGTCTGCTaGCCGAAGCAGCGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSASRLVC*PKQRLH
Trigger: GTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGCGTTCTCGTGCTCGTaGTTCTTGAGGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCAFSCS*FLRCRS
Trigger: GGACCGGCACCTCAAGAAGCACGAGCACGAGAACGC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGCGTTCTCGTGCTCGTaGTTCTTGAGGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVAFSCS*FLRCRS
Trigger: GGACCGGCACCTCAAGAAGCACGAGCACGAGAACGC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATGTGAGGACCCCGGGGTaGTGGCTCACTGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDVRTPG*WLTGAF
Trigger: GAACGCACCAGTGAGCCAGCACCCCGGGGTCCTCAC...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGTCCTTCGTGGCTGGTaGCCTCGCTCTGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATVLRGW*PRSGHR
Trigger: CCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGAC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAG +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGLWTAT*MAVTEQ
Trigger: CTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAG...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATGCTGTCTCTGCTCCTTaGGGCAGGTTCCCCCGACGC +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHAVSAP*GRFPRR
Trigger: GCGTCGGGGGAACCTGCCGCAAGGAGCAGAGACAGC...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATCTGGGAGGAGAGCCTTaGCCTCCCCCACAAGGCTGC +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHLGGEP*PPPQGC
Trigger: GCAGCCTTGTGGGGGAGGGCAAGGCTCTCCTCCCAG...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCACCGTCACTTTTaGCTAGCTTCCTCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAERHRHF*LASSPS
Trigger: CGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCCCTCCGCGCTGTGGCTaGCCAGCAGGTCCCGGTTGG +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGPPRCG*PAGPGW
Trigger: CCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGG...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGTCGTCCTCCGCGCTGTaGCTGGCCAGCAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLSSSAL*LASRSR
Trigger: CCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACGA...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGCGGGGATGGGCGACATaGCACTGTCCTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGRGWAT*HCPRPR
Trigger: ACGAGGCCGAGGACAGTGCCATGTCGCCCATCCCCG...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCTTCCATCTTCCTCTTaGCCCAGACCCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQLPSSS*PRPPGQ
Trigger: CTGGCCTGGGGGTCTGGGCCAAGAGGAAGATGGAAG...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGCCGCAGGTCCAGCTTaGACTGGAAGAGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEAAGPA*TGRVRH
Trigger: GTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTCGCGCTCCTCCGTGTaGATGACCATGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCSRSSV*MTMCCS
Trigger: GGAGCAGCACATGGTCATCCACACGGAGGAGCGCGA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCGTTTGCCGCTGTCGTaGGACATCTGGTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVRLPLS*DIWWRM
Trigger: CATCCGCCACCAGATGTCCCACGACAGCGGCAAACG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCTGTCCATCATGGGGCTaGGGGTCAAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: TVSSIRSLRHRCGLVARSCPSWG*GSRAGP
Trigger: CGGGCCTGCCCTTGACCCCCAGCCCCATGATGGACA...GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTTTGCCTTGTCCATCATaGGGCTGGGGGTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRLPCPS*GWGSRA
Trigger: TGCCCTTGACCCCCAGCCCCATGATGGACAAGGCAA...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCCGGGGGTACAAGGATaGAGGGAAGATGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVPGVQG*REDARE
Trigger: TTCCCGGGCATCTTCCCTCCATCCTTGTACCCCCGG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGGGGGACTGGGGAGCTTaGCGTCCTGGGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPGDWGA*RPGCGS
Trigger: TGAACCACACCCAGGACGCCAAGCTCCCCAGTCCCC...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCTTGACCAGCAAGTTGTaGGCGAGGGCTCGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLLTSKL*ARARSV
Trigger: CACGGACCGAGCCCTCGCCCACAACTTGCTGGTCAA...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTTGACCAGCAAGTTGTaGGCGAGGGCTCGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQLTSKL*ARARSV
Trigger: CACGGACCGAGCCCTCGCCCACAACTTGCTGGTCAA...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGAGAAGGGCGAGGGCTTaGCGTAGTGGAGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPERRARA*RSGAGA
Trigger: AGCCCCCGCTCCACTACGCCAAGCCCTCGCCCTTCT...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGCTGACATCTGGGGGTaGAAGAGCAGCGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSADIWG*KSSGDG
Trigger: GCCGTCCCCGCTGCTCTTCCACCCCCAGATGTCAGC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTGGCTTCTCCTTGTTGTaGATGTTCCGGACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGGFSLL*MFRTCR
Trigger: GCGGCACGTCCGGAACATCCACAACAAGGAGAAGCC...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGGGGTGCTGGCTCACTaGTGCGTTCTCGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAGVLAH*CVLVLV
Trigger: CACGAGCACGAGAACGCACCAGTGAGCCAGCACCCC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGCTAGGCCTGGACACTaGGCACTGCCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFARPGH*ALPSTI
Trigger: GATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCSVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: FGRLHGSRVWPRASCSASAGTRQ*PPASVS
Trigger: TGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGC...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGGCCACATCTCTGCATaGCGGATCCAAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVGHISA*RIQATG
Trigger: GCCTGTGGCTTGGATCCGCCATGCAGAGATGTGGCC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTCCCGACACGCCAGCTaGCTCTTCTGCAGGCAGCTC +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFSRHAS*LFCRQL
Trigger: GAGCTGCCTGCAGAAGAGCCAGCTGGCGTGTCGGGA...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGGCCCTTGTCATCTCTaGGCACCAACACTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLGPCHL*APTLLG
Trigger: GCCCAGCAGTGTTGGTGCCCAGAGATGACAAGGGCC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGTGGACTCTGGGGACGTaGAGGTCTTGGCCAGTCGGG +
Preference number: 4 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPWTLGT*RSWPVG
Trigger: CCCGACTGGCCAAGACCTCCACGTCCCCAGAGTCCA...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGCGTCCAGAGAACCCTaGTTCTTAGCCTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEASREP*FLACLH
Trigger: GTGCAGGCAGGCTAAGAACCAGGGTTCTCTGGACGC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378391.6
3UTR CAA 72 bp CCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTaGTTCTGCCTCGGGGCACCCAGCATCACCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PSAWFTGVAPRL*FCLGAPSITLA
Trigger: AGCCAAGGTGATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCTTCGGAGATCTTTGTaGTGCAGCCTTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQLRRSL*CSLPGA
Trigger: CGCCCCAGGAAGGCTGCATCACAAAGATCTCCGAAG...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCTGCCAGCCCCCGCCTaGTTTGCATCCACGCAGAAC +
Preference number: 4 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDLPAPA*FASTQN
Trigger: GTTCTGCGTGGATGCAAATCAGGCGGGGGCTGGCAG...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCAAGGCCCTCGGGCTTaGGCTCCTCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHQGPRA*APQPGP
Trigger: AGGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTG...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGCTCCTCCGTGTGGATaGCCATGTGCTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSAPPCG*PCAAPG
Trigger: GCCTGGAGCAGCACATGGTCATCCACACGGAGGAGC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGGTTGCTGGGGTCCGTaGACACCTTCACGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEGCWGP*TPSRSF
Trigger: AAAACTGCGTGAAGGTGTTCACGGACCCCAGCAACC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTATGCTTGTGCTGCTTaGGGCCGGAGGACGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLYACAA*GRRTWR
Trigger: TCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCCAGGCTGGCGTGATTaGGGCTGGGGGAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPEPGWRD*GWGRVL
Trigger: CAAAACCCTCCCCCAGCCTCAATCACGCCAGCCTGG...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGAGGGAAAGTACTCGTTaGAGCCCAGGCTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: GTGAAWWPGAIRWDCSPGRESTR*SPGWRD
Trigger: ATCACGCCAGCCTGGGCTTCAACGAGTACTTTCCCT...CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTCCCCGTGGTGGTGTTaGCGTCCTCAAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQSPWWC*RPQSHC
Trigger: GCAGTGACTTTGAGGACGTCAACACCACCACGGGGA...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCCCGTGGTGGTGTTaGCGTCCTCAAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVSPWWC*RPQSHC
Trigger: GCAGTGACTTTGAGGACGTCAACACCACCACGGGGA...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTGTAGATGGGGTCCATaGAGAAGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCCRWGP*RRARAW
Trigger: CCAAGCCCTCGCCCTTCTTCATGGACCCCATCTACA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCTCCCACGGGGTCTGTaGCCTTCCGCTTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWLPRGL*PSAFLP
Trigger: GGGTAGAAAAGCGGAAGGTCACAGACCCCGTGGGAG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCATGGTCTCTATGGCTaGCATCTGGGGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSHGLYG*HLGVEE
Trigger: CTCTTCCACCCCCAGATGTCAGCCATAGAGACCATG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTGGTTCGAAGAGATGCTaGAGGAGCGGTCGCAGTACT +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGGSKRC*RSGRST
Trigger: AGTACTGCGACCGCTCCTTCAGCATCTCTTCGAACC...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCCCGACGTGGCTCCAGTaGCCTTCAACCAAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFPTWLQ*PSTKRP
Trigger: TGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGG...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCCGACGTGGCTCCAGTaGCCTTCAACCAAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAPTWLQ*PSTKRP
Trigger: TGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: SDVAPVTFNQASREPWEGGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGAATCCTTGGAGATGGTaGGACTCTACGACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPNPWRW*DSTTAL
Trigger: TAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATT...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTTGTGATCCGTCGGGTTaGGCCTCCTGCAGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSCDPSG*ASCRSL
Trigger: GAGGCTCCTGCAGGAGGCTCAACCCGACGGATCACA...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTCTGTGGATATGCTTGTaGTGCTTGAGGCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGLWICL*CLRPED
Trigger: GTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAG...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGTGCGGCAGTCGGCGTaGATCCGCTTGTGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGVRQSA*IRLCRH
Trigger: GTGCCGGCACAAGCGGATGCACGCCGACTGCCGCAC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTCCTTGCACTTGATCTaGGTGCGGCAGTCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLSLHLI*VRQSAC
Trigger: GCACGCCGACTGCCGCACGCAGATCAAGTGCAAGGA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTCCTTGCACTTGATCTaGGTGCGGCAGTCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASLHLI*VRQSAC
Trigger: GCACGCCGACTGCCGCACGCAGATCAAGTGCAAGGA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGCGTGTAATGGTTCTTaGCCTCGCAGAAGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCACNGS*PRRSAG
Trigger: ACCGGCGCTTCTGCGAGGGCAAGAACCATTACACGC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCGTGTAATGGTTCTTaGCCTCGCAGAAGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAACNGS*PRRSAG
Trigger: ACCGGCGCTTCTGCGAGGGCAAGAACCATTACACGC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCACGTCCTCAAAGTCACTaGCGTCCGACATGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSARPQSH*RPTCRC
Trigger: GCAGCGACATGTCGGACGGCAGTGACTTTGAGGACG...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCGTCCTCAAAGTCACTaGCGTCCGACATGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLRPQSH*RPTCRC
Trigger: GCAGCGACATGTCGGACGGCAGTGACTTTGAGGACG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCGCCGGCGCCCAGCTTaGGTTCCCCATAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATRRRPA*VPHRRG
Trigger: ACCACGTCTATGGGGAACGCAAGCTGGGCGCCGGCG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGGGGCTGCAGGGAGCTaGCCGAGTCCGCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPGAAGS*PSPPSW
Trigger: CCATGAAGGCGGACTCGGGCAGCTCCCTGCAGCCCC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGGGGCTGCAGGGAGCTaGCCGAGTCCGCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHGAAGS*PSPPSW
Trigger: CCATGAAGGCGGACTCGGGCAGCTCCCTGCAGCCCC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCTCCCCGTGGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGTCCAGGTTGGTCTGCTaGCCGAAGCAGCGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: ASPWHVFSASLDHPAPTESRLVC*PKQRLH
Trigger: GTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGA...CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTCCAGGTTGGTCTGCTaGCCGAAGCAGCGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASRLVC*PKQRLH
Trigger: GTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGCGGTCCAGGTTGGTCTaGTGCCCGAAGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: FGRLHGSRVWPRASCSASRSRLV*CPKQRL
Trigger: CAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCG...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATCGTGCTTCTTGAGGTaGCGGTCCAGGTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSASCFLR*RSRLVC
Trigger: GCAGACCAACCTGGACCGGCACCTCAAGAAGCACGA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGTGCTTCTTGAGGTaGCGGTCCAGGTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVSCFLR*RSRLVC
Trigger: GCAGACCAACCTGGACCGGCACCTCAAGAAGCACGA...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGCGTTCTCGTGCTCGTaGTTCTTGAGGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFAFSCS*FLRCRS
Trigger: GGACCGGCACCTCAAGAAGCACGAGCACGAGAACGC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGTGCTGGCTCACTGGTaGGTTCTCGTGCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCVLAHW*VLVLVL
Trigger: AAGCACGAGCACGAGAACGCACCAGTGAGCCAGCAC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCTCCTCCACGTCCTCCTaGTTCTCACTGGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPSSTSS*FSLARP
Trigger: AGGCCTAGCCAGTGAGAAGCAGGAGGACGTGGAGGA...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGACACGGTGTCATCCTaGGACTTCCCGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSDTVSS*DFPARL
Trigger: CAGCCTGGCCGGGAAGTCGCAGGATGACACCGTGTC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGGTTGATGGGGTGAAATaGTCCAGACTCCGACGTGGC +
Preference number: 4 (lower is better)
Translates to: GTGAAWWPGAIRWDCSPGVDGVK*SRLRRG
Trigger: GCCACGTCGGAGTCTGGAGCATTTCACCCCATCAAC...CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGTCCTTCGTGGCTGGTaGCCTCGCTCTGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGVLRGW*PRSGHR
Trigger: CCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGAC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGAGCAGAGCGTCCACCTaGCCACTGGCTGATTCTGCG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWSRAST*PLADSA
Trigger: CGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCT...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCCGCGCCTCTTGTTCTaGCTCGGGGCACCCAGCATC +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATPRLLF*LGAPSI
Trigger: GATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGGGAAGGAAGATGGGTaGCCGGCCACATCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLGKEDG*PATSLH
Trigger: ATGCAGAGATGTGGCCGGGCACCCATCTTCCTTCCC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCTGTGCTGTCTCTaGTCCTTGCGGCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: FGRLHGSRVWPRASCSASGLCCL*SLRQVP
Trigger: GGGAACCTGCCGCAAGGAGCAGAGACAGCACAGCCC...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGAGTGGGGAAGAAGTTaGGTCCCAAGAGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQEWGRS*VPREGG
Trigger: GCCTCCCTCTCTTGGGACGCAACTTCTTCCCCACTC...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCATCCCTGTCCATGCTaGACAGTTACATGGCCCCGT +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSHPCPC*TVTWPR
Trigger: ACGGGGCCATGTAACTGTGCAGCATGGACAGGGATG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATCGCCTTGGATCGCATaGTGTCGGCTCGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSASPWIA*CRLAES
Trigger: AGATTCCGCGAGCCGACACCATGCGATCCAAGGCGA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTTCGTCCTCCGCGCTGTaGCTGGCCAGCAGGTCCCGG +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSSSSAL*LASRSR
Trigger: CCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACGA...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGTGATGCAGCCTTCCTaGGGCGACACTTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLVMQPS*GDTSTS
Trigger: GGACGTGGAAGTGTCGCCCCAGGAAGGCTGCATCAC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCAGCAGCTCCTCACCTaGCTCAATGTCCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPQQLLT*LNVLND
Trigger: GTCATTAAGGACATTGAGCCAGGTGAGGAGCTGCTG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCCGTCACAGCGGAACGTaGGCTCCTCGTCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGRHSGT*APRPGR
Trigger: CCGGCCTGGACGAGGAGCCCACGTTCCGCTGTGACG...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCGTCACAGCGGAACGTaGGCTCCTCGTCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLRHSGT*APRPGR
Trigger: CCGGCCTGGACGAGGAGCCCACGTTCCGCTGTGACG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGCGTCACAGCGGAACGTaGGCTCCTCGTCCAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPRHSGT*APRPGR
Trigger: CCGGCCTGGACGAGGAGCCCACGTTCCGCTGTGACG...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCCGCAGGTCCAGCTTaGACTGGAAGAGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAAAGPA*TGRVRH
Trigger: GTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTTGCACTCGTGGGCTTaGCCGCTGCCACCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATLHSWA*PLPPPR
Trigger: CCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAA...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCTGTCGTGGGACATCTaGTGGCGGATGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVLSWDI*WRMRLD
Trigger: GTCCAACCTCATCCGCCACCAGATGTCCCACGACAG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCGTTTGCCGCTGTCGTaGGACATCTGGTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWRLPLS*DIWWRM
Trigger: CATCCGCCACCAGATGTCCCACGACAGCGGCAAACG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGTTTGCCGCTGTCGTaGGACATCTGGTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLRLPLS*DIWWRM
Trigger: CATCCGCCACCAGATGTCCCACGACAGCGGCAAACG...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTTGTGCCGGCACAGGTTaGAGAACTGCGTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRCAGTG*RTACRT
Trigger: AGTCCTACACGCAGTTCTCCAACCTGTGCCGGCACA...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATTGCCTTGTCCATCATaGGGCTGGGGGTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSALPCPS*GWGSRA
Trigger: TGCCCTTGACCCCCAGCCCCATGATGGACAAGGCAA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCTTGCCTTGTCCATCATaGGGCTGGGGGTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPLPCPS*GWGSRA
Trigger: TGCCCTTGACCCCCAGCCCCATGATGGACAAGGCAA...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTTGGCGTCCTGGGTGTaGTTCAGGGGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVALASWV*FRGLLS
Trigger: GCTCAAGAGCCCCCTGAACCACACCCAGGACGCCAA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCGGGAGCTTGGCGTCCTaGGTGTGGTTCAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: GQSGSGWDSCTRGLVKEGGSLAS*VWFRGL
Trigger: GAGCCCCCTGAACCACACCCAGGACGCCAAGCTCCC...GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTCCGAGCCCGTCCCCGTaGTCGTGTCCAGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRPSPSP*SCPGRS
Trigger: GGACCGACCTGGACACGACCACGGGGACGGGCTCGG...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAAGTTGGGCAGGAACTaGAAGGGGAACGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQKLGRN*KGNAEW
Trigger: CCACTCGGCGTTCCCCTTCCAGTTCCTGCCCAACTT...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCAAGTTGGGCAGGAACTaGAAGGGGAACGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVKLGRN*KGNAEW
Trigger: CCACTCGGCGTTCCCCTTCCAGTTCCTGCCCAACTT...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGTTGACCAGCAAGTTGTaGGCGAGGGCTCGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWLTSKL*ARARSV
Trigger: CACGGACCGAGCCCTCGCCCACAACTTGCTGGTCAA...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCACGCCGCCGTTTTGGCTaGCACGGGCCCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRARRRFG*HGPGCR
Trigger: TCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCG...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCTCTATGGCTGACATCTaGGGGTGGAAGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLSMADI*GWKSSG
Trigger: CCCGCTGCTCTTCCACCCCCAGATGTCAGCCATAGA...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGGCTTCTCCTTGTTGTaGATGTTCCGGACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCGFSLL*MFRTCR
Trigger: GCGGCACGTCCGGAACATCCACAACAAGGAGAAGCC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTCGTCTAAAAGTGCGTaGTTGTCCGACTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVSSKSA*LSDSEV
Trigger: CACCTCAGAGTCGGACAACCACGCACTTTTAGACGA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTTCGTCTAAAAGTGCGTaGTTGTCCGACTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPSSKSA*LSDSEV
Trigger: CACCTCAGAGTCGGACAACCACGCACTTTTAGACGA...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCCTCCTGCTTCTCACTaGCTAGGCCTGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPPPASH*LGLDTG
Trigger: CCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGG...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTCCTGCTTCTCACTaGCTAGGCCTGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWPPASH*LGLDTG
Trigger: CCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAACAGACCGCCTTCGTaGTCCTCAGCACACCTTCGG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQNRPPS*SSAHLR
Trigger: CCGAAGGTGTGCTGAGGACCACGAAGGCGGTCTGTT...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCGGAATGAACCATGGTaGGTGGGGAGGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPRNEPW*VGRMLR
Trigger: CCTCAGCATCCTCCCCACCCACCATGGTTCATTCCG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGAGTCGGAATGAACCATaGTGGGTGGGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAESRNEP*WVGRML
Trigger: CAGCATCCTCCCCACCCACCATGGTTCATTCCGACT...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGGCGAGGCAGCTCCGTTaGCTGTCTTTGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPEARQLR*LSLDGH
Trigger: GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGC...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGCGAGGCAGCTCCGTTaGCTGTCTTTGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSARQLR*LSLDGH
Trigger: GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGTCCACCTGCCCACTaGCTGATTCTGCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPERPPAH*LILRGS
Trigger: GCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACG...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGGAGACCCAGGACGTaGCCAAGGCCCTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGRPRT*PRPCLQ
Trigger: CTGAAGGCAGGGCCTTGGCCACGTCCTGGGTCTCCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGAGAGCAGGAACGGGTaGGGACGTCGGCTCGCTGGG +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHESRNG*GRRLAG
Trigger: CCCAGCGAGCCGACGTCCCCACCCGTTCCTGCTCTC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGGACAGCTGCACGCGTaGCCTTGTAAAGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCGQLHA*PCKGRP
Trigger: AGGCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 72 bp CCCATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTaGCCTCGTTGTGCAGATCTGGCGTGGGAGGAATCC +
Preference number: 4 (lower is better)
Translates to: PMAPAHAQVGPV*PRCADLAWEES
Trigger: GGATTCCTCCCACGCCAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCATGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGAGCCCTCCTTGGGGGTaGAGTCCTCGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLSPPWG*SPRWWG
Trigger: TCCCCACCAGCGAGGACTTCACCCCCAAGGAGGGCT...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCGCTCCTCCGTGTGGATaGCCATGTGCTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSAAPPCG*PCAAPG
Trigger: GCCTGGAGCAGCACATGGTCATCCACACGGAGGAGC...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTCTCCTGCATCCCCATaGAGCCGGGGCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFSPASP*SRGQST
Trigger: AGTACTTTGGCCCCGGCTTCATGGGGATGCAGGAGA...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTCTCCTGCATCCCCATaGAGCCGGGGCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLSPASP*SRGQST
Trigger: AGTACTTTGGCCCCGGCTTCATGGGGATGCAGGAGA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTCTCCTGCATCCCCATaGAGCCGGGGCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASPASP*SRGQST
Trigger: AGTACTTTGGCCCCGGCTTCATGGGGATGCAGGAGA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGCGAGGGCTCGGTCCGTaGAGGGGTAAAGGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLRGLGP*RGKGSG
Trigger: CCCACTCCCTTTACCCCTTCACGGACCGAGCCCTCG...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCACTTTGGCTCGGCCTTaGCCAGCAAGTTGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFTLARP*PASCGR
Trigger: TCGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGT...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCATGGTCTCTATGGCTaGCATCTGGGGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVHGLYG*HLGVEE
Trigger: CTCTTCCACCCCCAGATGTCAGCCATAGAGACCATG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTCCTCAGGTGTCTGGTaGGATTGGCTGATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCSSGVW*DWLIWG
Trigger: TCCCCAGATCAGCCAATCTCACCAGACACCTGAGGA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGGTTCGAAGAGATGCTaGAGGAGCGGTCGCAGTACT +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCGSKRC*RSGRST
Trigger: AGTACTGCGACCGCTCCTTCAGCATCTCTTCGAACC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGGTTCGAAGAGATGCTaGAGGAGCGGTCGCAGTACT +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVGSKRC*RSGRST
Trigger: AGTACTGCGACCGCTCCTTCAGCATCTCTTCGAACC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCCGTGCTCGTGCTTCTTaGGGTGCCGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSARARAS*GAGPGW
Trigger: CCAACCTGGACCGGCACCTCAAGAAGCACGAGCACG...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp ACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCCCGACGTGGCTCCAGTaGCCTTCAACCAAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: TVSSIRSLRHRCGLVARSPTWLQ*PSTKRP
Trigger: TGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGG...GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGGTGGTTGATGGGGTaGAATGCTCCAGACTCCGAC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLRWLMG*NAPDSD
Trigger: GTCGGAGTCTGGAGCATTTCACCCCATCAACCACCT...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGCCACGTGGCGGTCCTaGCACCAATTCCATGTCACA +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWATWRS*HQFHVT
Trigger: TGTGACATGGAATTGGTGTCAGGACCGCCACGTGGC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTTGTTGTGGAAACGCGTaGGAAGGCCTGAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRCCGNA*EGLSSC
Trigger: ACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACA...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCTTGGGTCCCACTCATaGAGGGTCTGCCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATLGSHS*RVCQAH
Trigger: GTGGGCCTGGCAGACCCTTCATGAGTGGGACCCAAG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGTCCGCTCGCAGTCCTTaGACTCGTGGGCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLSARSP*TRGLGR
Trigger: GCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGA...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTGGATATGCTTGTGCTaGTTGAGGCCGGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVWICLC*LRPEDV
Trigger: CACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCA...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCTGTGGATATGCTTGTaGTGCTTGAGGCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCLWICL*CLRPED
Trigger: GTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAG...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCACCGTGCTGTGGATATaGTTGTGCTGCTTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPTVLWI*LCCLRP
Trigger: CGGCCTCAAGCAGCACAAGCATATCCACAGCACGGT...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGGCCCGGGGCAAAGATaGCGCCCGGCGTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHGPGQR*RPACNG
Trigger: ACCATTACACGCCGGGCGGCATCTTTGCCCCGGGCC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGCTCGGGCCCCGCAGCTaGCGTCGTGCCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRLGPRS*RRALAA
Trigger: AGCAGCCAGGGCACGACGGCAGCTGCGGGGCCCGAG...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCGTCCGACATGTCGCTaGTCCTGGTCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVRPTCR*SWSSAS
Trigger: AGAAGCTGAAGACCAGGAGCAGCGACATGTCGGACG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCATGGCACGGGCCCGGCTaGCGATGCTCAGGTCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRAWHGPG*RCSGPA
Trigger: CGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCA...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGCGCCGGCGCCCAGCTTaGGTTCCCCATAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPRRRPA*VPHRRG
Trigger: ACCACGTCTATGGGGAACGCAAGCTGGGCGCCGGCG...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGTGGATGTTCCGGACGTaGCGCTGGAGGTTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWWMFRT*RWRFEE
Trigger: CTCTTCGAACCTCCAGCGGCACGTCCGGAACATCCA...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTCGTGCTTCTTGAGGTaGCGGTCCAGGTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLSCFLR*RSRLVC
Trigger: GCAGACCAACCTGGACCGGCACCTCAAGAAGCACGA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGGTGAGGACCCCGGGGTaGTGGCTCACTGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLVRTPG*WLTGAF
Trigger: GAACGCACCAGTGAGCCAGCACCCCGGGGTCCTCAC...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCTGCCGTCCACGATCTaGATGTCCGCCCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVALPSTI*MSARFS
Trigger: AGAGAAACGGGCGGACATGCAGATCGTGGACGGCAG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGAAATGCTTCCTCAGCTaGTCTGCGGAGGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWKCFLS*SAEVQP
Trigger: GGGCTGGACCTCCGCAGAGCAGCTGAGGAAGCATTT...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR GCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAGTCCTTCGTGGCTGGTaGCCTCGCTCTGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQAVLRGW*PRSGHR
Trigger: CCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGAC...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGACTTCTTCGGCCGTCTaGATGGTTCACGGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPTSSAV*MVHGCG
Trigger: GCCACACCCGTGAACCATGCAGACGGCCGAAGAAGT...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGGCGATCCGCTGGGATTaGTCCCCAGGGCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLAIRWD*SPGQPR
Trigger: ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGC...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGAGTCTCAGGCACAGGTaGGGCTTGGTGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLSLRHR*GLVARS
Trigger: GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACT...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGCTGTCTCTGCTCCTTaGGGCAGGTTCCCCCGACGC +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHAVSAP*GRFPRR
Trigger: GCGTCGGGGGAACCTGCCGCAAGGAGCAGAGACAGC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TGCCCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTGAGCCCGCCCCGCGGTGCCCCTaGCCGTCAGCTTCCCAACGG +
Preference number: 4 (lower is better)
Translates to: CPSASQRTTKDTLCKSEPAPRCP*PSASQR
Trigger: CCGTTGGGAAGCTGACGGGCAGGGGCACCGCGGGGC...GGGCTCAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTCGCCTTGGATCGCATaGTGTCGGCTCGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASPWIA*CRLAES
Trigger: AGATTCCGCGAGCCGACACCATGCGATCCAAGGCGA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTCCTCGCCCTCGCCTTaGATCGCATGGTGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATSSPSP*IAWCRL
Trigger: GAGCCGACACCATGCGATCCAAGGCGAGGGCGAGGA...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGTGGCCCCACGGGGATaGGCGACATGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHVAPRG*ATWHCP
Trigger: AGGACAGTGCCATGTCGCCCATCCCCGTGGGGCCAC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGCTTCCATCTTCCTCTTaGCCCAGACCCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGLPSSS*PRPPGQ
Trigger: CTGGCCTGGGGGTCTGGGCCAAGAGGAAGATGGAAG...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTAGGTCCAGCTTGGACTaGAAGAGTTCGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRRSSLD*KSSSHS
Trigger: CGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCT...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCCAGGCTGTACTTGTTaGGGAACATCCGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQPGCTC*GTSARS
Trigger: ACTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGG...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATTCGCGCTCCTCCGTGTaGATGACCATGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDSRSSV*MTMCCS
Trigger: GGAGCAGCACATGGTCATCCACACGGAGGAGCGCGA...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTGGCTTCACCGTGCTGTaGATATGCTTGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGGFTVL*ICLCCL
Trigger: CAAGCAGCACAAGCATATCCACAGCACGGTGAAGCC...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTGTGCCGGCACAGGTTaGAGAACTGCGTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVCAGTG*RTACRT
Trigger: AGTCCTACACGCAGTTCTCCAACCTGTGCCGGCACA...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATCCGGGGGTACAAGGATaGAGGGAAGATGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHPGVQG*REDARE
Trigger: TTCCCGGGCATCTTCCCTCCATCCTTGTACCCCCGG...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATTTGGCGTCCTGGGTGTaGTTCAGGGGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDLASWV*FRGLLS
Trigger: GCTCAAGAGCCCCCTGAACCACACCCAGGACGCCAA...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGGGGAGCTTGGCGTCCTaGGTGTGGTTCAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SDVAPVTFNQASREPWEGGSLAS*VWFRGL
Trigger: GAGCCCCCTGAACCACACCCAGGACGCCAAGCTCCC...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGGGACTGGGGAGCTTaGCGTCCTGGGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGDWGA*RPGCGS
Trigger: TGAACCACACCCAGGACGCCAAGCTCCCCAGTCCCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCAGACTCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGAGCCGCCCCCAAACTTaGGCTGGCCCTCGGCGGACT +
Preference number: 4 (lower is better)
Translates to: PDSDVAPVTFNQASREPWSRPQT*AGPRRT
Trigger: AGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCT...CCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGAGAAGGGCGAGGGCTTaGCGTAGTGGAGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPRRARA*RSGAGA
Trigger: AGCCCCCGCTCCACTACGCCAAGCCCTCGCCCTTCT...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCTGTCATGGTCTCTATaGCTGACATCTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PRPHAGTRQWPPASVSAELSWSL*LTSGGG
Trigger: TCCACCCCCAGATGTCAGCCATAGAGACCATGACAG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCCTCCCCGTGGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGCCGAGTCCGCCTTCATaGCTGCAAAGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASPWHVFSASLDHPAPTEPSPPS*LQSSPA
Trigger: AGCTGGAGAGCTTTGCAGCCATGAAGGCGGACTCGG...CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGAGAGCGTTGGGGGTaGGGACCGGAAGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGERWG*GPEVEG
Trigger: CCCTTCAACTTCCGGTCCCCACCCCCAACGCTCTCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGTTCCGGACGTGCCGCTaGAGGTTCGAAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWFRTCR*RFEEML
Trigger: CAGCATCTCTTCGAACCTCCAGCGGCACGTCCGGAA...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGGTGCCGGTCCAGGTTaGTCTGCTGCCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGGAGPG*SAARSS
Trigger: GCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGGGTGCTGGCTCACTaGTGCGTTCTCGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGVLAH*CVLVLV
Trigger: CACGAGCACGAGAACGCACCAGTGAGCCAGCACCCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGCGCTGGTCCCCAGGTaGTTCGTGAGGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGALVPR*FVRTPG
Trigger: CCCCGGGGTCCTCACGAACCACCTGGGGACCAGCGC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCTGTCCGACTCTGAGGTaGGAGAGGACGCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: GQSGSGWDSCTRGLVKEGCPTLR*ERTRWS
Trigger: GGACCAGCGCGTCCTCTCCCACCTCAGAGTCGGACA...GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATCCTCCTGCTTCTCACTaGCTAGGCCTGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHPPASH*LGLDTG
Trigger: CCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGG...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGAACAGACCGCCTTCGTaGTCCTCAGCACACCTTCGG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWNRPPS*SSAHLR
Trigger: CCGAAGGTGTGCTGAGGACCACGAAGGCGGTCTGTT...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR CCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCATCATTGCATATGCCTaGTTCTTAGCCTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVIIAYA*FLACLH
Trigger: GTGCAGGCAGGCTAAGAACCAGGCATATGCAATGAT...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000509860.1
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTCCGTCCTTCGTGGCTaGTGCCCTCGCTCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGSVLRG*CPRSGH
Trigger: GTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSAGTRQ*PPASVS
Trigger: TGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGC...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHAGTRQ*PPASVS
Trigger: TGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATCATGGTTCACGGGTGTaGCCCCGCGCCTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHHGSRV*PRASCS
Trigger: AGAACAAGAGGCGCGGGGCCACACCCGTGAACCATG...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTTTCAGAGGACGGCGCTaGGTTCCCGCGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSFRGRR*VPAWGG
Trigger: GCCACCCCACGCGGGAACCCAGCGCCGTCCTCTGAA...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCTGGGCAGAGCAAAACTaGGAGGGCGAGGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: GQSGSGWDSCTRGLVKEGWAEQN*EGEARW
Trigger: CCAGCGAGCCTCGCCCTCCCAGTTTTGCTCTGCCCA...GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCCCGGGCCAGGCTCCCTaGCCCTTGTCATCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSPGQAP*PLSSLG
Trigger: GCCCAGAGATGACAAGGGCCAGGGAGCCTGGCCCGG...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGATATGCCTTCGGGTGTaGTCAAAGCCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLICLRV*SKPTAR
Trigger: CCTGGCCGTGGGCTTTGACCACACCCGAAGGCATAT...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGGTTGCTGGGGTCCGTaGACACCTTCACGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAGCWGP*TPSRSF
Trigger: AAAACTGCGTGAAGGTGTTCACGGACCCCAGCAACC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGGTTGCTGGGGTCCGTaGACACCTTCACGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFGCWGP*TPSRSF
Trigger: AAAACTGCGTGAAGGTGTTCACGGACCCCAGCAACC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGAGGGAAAGTACTCGTTaGAGCCCAGGCTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPRESTR*SPGWRD
Trigger: ATCACGCCAGCCTGGGCTTCAACGAGTACTTTCCCT...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGAGGGAAAGTACTCGTTaGAGCCCAGGCTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLRESTR*SPGWRD
Trigger: ATCACGCCAGCCTGGGCTTCAACGAGTACTTTCCCT...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCCTCGTTGTGCAGATCTGGCGTGGGAGGAATCCCTTTCACTGTGATCCGTCGGCCTGGCTGCTGTTGCTaGCGGCGGAGACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: ASLCRSGVGGIPFTVIRRPGCCC*RRRPGA
Trigger: TGCCCCTGGTCTCCGCCGTCAGCAACAGCAGCCAGG...CCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGGGTGGCGGGAAGAATaGGTGCTGGGAATAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWGWREE*VLGIED
Trigger: GTCTTCTATTCCCAGCACTCATTCTTCCCGCCACCC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATTGTAGATGGGGTCCATaGAGAAGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHCRWGP*RRARAW
Trigger: CCAAGCCCTCGCCCTTCTTCATGGACCCCATCTACA...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTCTGGTGAGATTGGCTaGTCTGGGGAAGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQSGEIG*SGEDLP
Trigger: GGGAAGATCTTCCCCAGATCAGCCAATCTCACCAGA...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGTGCTCGTGCTTCTTaGGGTGCCGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHRARAS*GAGPGW
Trigger: CCAACCTGGACCGGCACCTCAAGAAGCACGAGCACG...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCLEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: GVATRRDRVLRGPARLRPGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVLHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPLHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCACTGCATGGCCGTCACTaGACAGTGTTCTCAAGACCA +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSALHGRH*TVFSRP
Trigger: TGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAG...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATCGGAGCTCGAAGTCTaGTGGGATCGGAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSASELEV*WDRNVF
Trigger: GAAGACATTCCGATCCCAGCAGACTTCGAGCTCCGA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCAGCCCCCGCCTGATTTaGATCCACGCAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASPRLI*IHAELL
Trigger: GAGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCT...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTGTGGATGACCATGTaGTGCTCCAGGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAVWMTM*CSRLYL
Trigger: CAAGTACAGCCTGGAGCAGCACATGGTCATCCACAC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCTGTGGATATGCTTGTaGTGCTTGAGGCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVALWICL*CLRPED
Trigger: GTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGTGCGGCAGTCGGCGTaGATCCGCTTGTGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGVRQSA*IRLCRH
Trigger: GTGCCGGCACAAGCGGATGCACGCCGACTGCCGCAC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGTCCGACATGTCGCTaGTCCTGGTCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLRPTCR*SWSSAS
Trigger: AGAAGCTGAAGACCAGGAGCAGCGACATGTCGGACG...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCTTCTCGGCAATGGATaGGATGGCCTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: RGHPAVATSFCLSRASTCLLGNG*DGLDGV
Trigger: GACTCCATCAAGGCCATCGCATCCATTGCCGAGAAG...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCCCAGCTTCTTCTCCTaGATCCCCATGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATPSFFS*IPMKPG
Trigger: CCCCGGCTTCATGGGGATGCAGGAGAAGAAGCTGGG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGCTCAGGTCCAGCGGCTaGTCCTCGCCGGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRLRSSG*SSPDAG
Trigger: CCCCGCATCCGGCGAGGAGCAGCCGCTGGACCTGAG...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGGCCCGGCTGCCGATaGTCAGGTCCAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWGPGCR*SGPAAA
Trigger: AGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACTGGTGCGTTCTCGTaGTCGTGCTTCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVATGAFS*SCFLRC
Trigger: GCACCTCAAGAAGCACGAGCACGAGAACGCACCAGT...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTTCCTCAGCTGCTCTaGGGAGGTCCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHLPQLL*GGPAPS
Trigger: GGAAGGGGCTGGACCTCCGCAGAGCAGCTGAGGAAG...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAG +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSLWTAT*MAVTEQ
Trigger: CTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAG...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCAGCAGAGCGTCCACCTaGCCACTGGCTGATTCTGCG +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSASRAST*PLADSA
Trigger: CGCAGAATCAGCCAGTGGGCAGGTGGACGCTCTGCT...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp AGCGGAGGGCAGGTGCGAGGAGGCCTCCTTCGGAATTTCCATTTGGGGGATGGGGCCCGGCCACATCTCTaGATGGCGGATCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SGGQVRGGLLRNFHLGDGARPHL*MADPSH
Trigger: GTGGCTTGGATCCGCCATGCAGAGATGTGGCCGGGC...CCCATCCCCCAAATGGAAATTCCGAAGGAGGCCTCCTCGCACCTGCCCTCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTGTGGCACGTCTTCAGTaGAAGCCTGGACCACCCGGC +
Preference number: 4 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSVARLQ*KPGPPG
Trigger: GCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCAC...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTCGTCACCGTCACTTTTaGCTAGCTTCCTCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSRHRHF*LASSPS
Trigger: CGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACG...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGAGCTCGAAGTCTGCTaGGATCGGAATGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQELEVC*DRNVFR
Trigger: CCTGAAGACATTCCGATCCCAGCAGACTTCGAGCTC...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGTCCAGCTTGGACTaGAAGAGTTCGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQRSSLD*KSSSHS
Trigger: CGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCT...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTCAGTCCTTGCACTCGTaGGCTTGGCCGCTGCCACCG +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRQSLHS*AWPLPP
Trigger: CGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTG...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGAAGGCCTTGGGACACTaGTCGCATTTGTACTCGCGC +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWKALGH*SHLYSR
Trigger: GCGCGAGTACAAATGCGACCAGTGTCCCAAGGCCTT...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTCGTGGGACATCTGGTaGCGGATGAGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLSWDIW*RMRLDF
Trigger: GAAGTCCAACCTCATCCGCCACCAGATGTCCCACGA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATCTGTCGTGGGACATCTaGTGGCGGATGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHLSWDI*WRMRLD
Trigger: GTCCAACCTCATCCGCCACCAGATGTCCCACGACAG...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCGGCTTCACCGTGCTGTaGATATGCTTGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPGFTVL*ICLCCL
Trigger: CAAGCAGCACAAGCATATCCACAGCACGGTGAAGCC...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGCTGCCGTCGTGCCCTaGCTGCTGTTGCTGACGGCG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGAAVVP*LLLLTA
Trigger: CGCCGTCAGCAACAGCAGCCAGGGCACGACGGCAGC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCTGTCATGGTCTCTATaGCTGACATCTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQLSWSL*LTSGGG
Trigger: TCCACCCCCAGATGTCAGCCATAGAGACCATGACAG...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCCTGTCATGGTCTCTATaGCTGACATCTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVLSWSL*LTSGGG
Trigger: TCCACCCCCAGATGTCAGCCATAGAGACCATGACAG...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGGAGAGCGTTGGGGGTaGGGACCGGAAGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPGERWG*GPEVEG
Trigger: CCCTTCAACTTCCGGTCCCCACCCCCAACGCTCTCC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGGAGAGCGTTGGGGGTaGGGACCGGAAGTTGAAGGG +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHGERWG*GPEVEG
Trigger: CCCTTCAACTTCCGGTCCCCACCCCCAACGCTCTCC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGCGCTGGTCCCCAGGTaGTTCGTGAGGACCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWALVPR*FVRTPG
Trigger: CCCCGGGGTCCTCACGAACCACCTGGGGACCAGCGC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGTCGTCTAAAAGTGCGTaGTTGTCCGACTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GTGAAWWPGAIRWDCSPGSSKSA*LSDSEV
Trigger: CACCTCAGAGTCGGACAACCACGCACTTTTAGACGA...CCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGCTAGGCCTGGACACTaGGCACTGCCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGARPGH*ALPSTI
Trigger: GATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGCACACCTTCGGGTGTaGTCAAAGCCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHAHLRV*SKPTAR
Trigger: CCTGGCCGTGGGCTTTGACCACACCCGAAGGTGTGC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR CCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGRLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCGAGGCAGCTCCGTTaGCTGTCTTTGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPARQLR*LSLDGH
Trigger: GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGCGTCCACCTGCCCACTaGCTGATTCTGCGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPRPPAH*LILRGS
Trigger: GCTGCCTCGCAGAATCAGCCAGTGGGCAGGTGGACG...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATTTGGGTGGGGACCTGTaGATTCCTCTGAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHLGGDL*IPLKAT
Trigger: CGTGGCCTTCAGAGGAATCCACAGGTCCCCACCCAA...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAACAGGTGCGGCTTGGTaGCCCGGAGCGATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRATGAAW*PGAIRW
Trigger: CCAGCGGATCGCTCCGGGCCACCAAGCCGCACCTGT...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGACCTCCCGTCACCGCTaGGGACAGCCTGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPTSRHR*GQPEEM
Trigger: CATCTCCTCAGGCTGTCCCCAGCGGTGACGGGAGGT...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTCCGAAAACGGCGGGATaGGACTGGGGGATCCGGAGA +
Preference number: 4 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSPKTAG*DWGIRR
Trigger: TCTCCGGATCCCCCAGTCCCATCCCGCCGTTTTCGG...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCCAAGTGCTGGGGCCTaGGGGTCTGAATGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATPSAGA*GSECSG
Trigger: TCCTGAGCATTCAGACCCCCAGGCCCCAGCACTTGG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGACCCTGGCCACCTaGCCATGGACACAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHLTLAT*PWTQPA
Trigger: AGCTGGCTGTGTCCATGGCCAGGTGGCCAGGGTCAG...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCACAGTCGGGGTCTGGATaGGACAGCTGCACGCGTGGC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQAQSGSG*DSCTRG
Trigger: GCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTG...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGTGGAATTTCCAGGGCTaGACTCTGGGGACGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FGRLHGSRVWPRASCSASWNFQG*TLGTWR
Trigger: CCTCCACGTCCCCAGAGTCCAGCCCTGGAAATTCCA...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGATGTCCTGGCGTCCCTaGCTGGGAGGAGAGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPMSWRP*LGGEPC
Trigger: GCAAGGCTCTCCTCCCAGCCAGGGACGCCAGGACAT...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTCAATCAAGGGGGACATaGGGCGAGCGCCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSQSRGT*GERQPP
Trigger: AGGAGGCTGGCGCTCGCCCCATGTCCCCCTTGATTG...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCACTGCCAGCCCCCGCCTaGTTTGCATCCACGCAGAAC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQALPAPA*FASTQN
Trigger: GTTCTGCGTGGATGCAAATCAGGCGGGGGCTGGCAG...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GCCTCGTTGTGCAGATCTGGCGTGGGAGGAATCCCTTTCACTGTGATCCGTCGGCCACACGGATGTACTTaGGCCAGCTGCCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: ASLCRSGVGGIPFTVIRRPHGCT*ASCQPP
Trigger: CGGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGG...CCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCATCTGCTCACTGATCTaGCACATGGTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVICSLI*HMVRFW
Trigger: CCAGAACCTCACCATGTGTCAGATCAGTGAGCAGAT...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGAGCGCAGCCCCCACTaGGCCACACGTGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGERSPH*ATRVLL
Trigger: AAGAAGTACACGTGTGGCTCAGTGGGGGCTGCGCTC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAGCTCCTCCGTGTGGATaGCCATGTGCTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQAAPPCG*PCAAPG
Trigger: GCCTGGAGCAGCACATGGTCATCCACACGGAGGAGC...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGGCAGACCTCACATATaGAAGGCTTCACCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLGRPHI*KASPCC
Trigger: ACAGCACGGTGAAGCCTTTCATATGTGAGGTCTGCC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CCAGACTCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGCCAGGCTGGCGTGATTaGGGCTGGGGGAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PDSDVAPVTFNQASREPWPGWRD*GWGRVL
Trigger: CAAAACCCTCCCCCAGCCTCAATCACGCCAGCCTGG...CCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGGTTCAGGGGGCTCTTaGGCAGCGATGTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHGSGGS*AAMWEV
Trigger: TACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCACTTTGGCTCGGCCTTaGCCAGCAAGTTGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATTLARP*PASCGR
Trigger: TCGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGT...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTCTCCCACGGGGTCTGTaGCCTTCCGCTTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSLPRGL*PSAFLP
Trigger: GGGTAGAAAAGCGGAAGGTCACAGACCCCGTGGGAG...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGTCCTCAGGTGTCTGGTaGGATTGGCTGATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPESSGVW*DWLIWG
Trigger: TCCCCAGATCAGCCAATCTCACCAGACACCTGAGGA...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTGCACAGGTGGCACTTaGAAGGCTTCTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQCTGGT*KASPCC
Trigger: ACAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCA...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCCCGACGTGGCTCCAGTaGCCTTCAACCAAGCGTCCA +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGPTWLQ*PSTKRP
Trigger: TGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGG...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGAGGTGGTTGATGGGGTaGAATGCTCCAGACTCCGAC +
Preference number: 4 (lower is better)
Translates to: FGRLHGSRVWPRASCSASRWLMG*NAPDSD
Trigger: GTCGGAGTCTGGAGCATTTCACCCCATCAACCACCT...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGTTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWLEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCCTTTTGATACCCGGCTaGCCTCCACTGACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: GQSGSGWDSCTRGLVKEGLLIPG*PPLTRS
Trigger: GCTCCTGGTCAGTGGAGGTCAGCCGGGTATCAAAAG...GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTCGGAGCTCGAAGTCTaGTGGGATCGGAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASELEV*WDRNVF
Trigger: GAAGACATTCCGATCCCAGCAGACTTCGAGCTCCGA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGCAGAACTTCTCACTaGCCAGGTCTTCGGAGATCT +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLRRTSH*PGLRRS
Trigger: AGATCTCCGAAGACCTGGGCAGTGAGAAGTTCTGCG...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGAGCCCCCGCCTGATTTaGATCCACGCAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPESPRLI*IHAELL
Trigger: GAGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCT...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTCGTGGGCTTGGCCGCTaGCACCGCCAAGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: HISAWRIQATGPRLPHIIRGLGR*HRQGPR
Trigger: CCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACG...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGTGTGGATGACCATGTaGTGCTCCAGGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLVWMTM*CSRLYL
Trigger: CAAGTACAGCCTGGAGCAGCACATGGTCATCCACAC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCCACATTCGAAGCGTTTaGCGCTGTCGTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFHIRSV*RCRGTS
Trigger: AGATGTCCCACGACAGCGGCAAACGCTTCGAATGTG...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCACATTCGAAGCGTTTaGCGCTGTCGTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWHIRSV*RCRGTS
Trigger: AGATGTCCCACGACAGCGGCAAACGCTTCGAATGTG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCACATTCGAAGCGTTTaGCGCTGTCGTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAHIRSV*RCRGTS
Trigger: AGATGTCCCACGACAGCGGCAAACGCTTCGAATGTG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGTGGATATGCTTGTGCTaGTTGAGGCCGGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPEWICLC*LRPEDV
Trigger: CACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCA...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGGCGTGCATCCGCTTGTaGCGGCACAGGTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLACIRL*RHRLEN
Trigger: GTTCTCCAACCTGTGCCGGCACAAGCGGATGCACGC...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGGCGTGCATCCGCTTGTaGCGGCACAGGTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: SDVAPVTFNQASREPWEGACIRL*RHRLEN
Trigger: GTTCTCCAACCTGTGCCGGCACAAGCGGATGCACGC...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTCCTTGCACTTGATCTaGGTGCGGCAGTCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHSLHLI*VRQSAC
Trigger: GCACGCCGACTGCCGCACGCAGATCAAGTGCAAGGA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCCGGCGGACTTGCCCTTaGCCTTGTCCTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGRRTCP*PCPCQG
Trigger: ACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCG...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCCCAGCTTCTTCTCCTaGATCCCCATGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLPSFFS*IPMKPG
Trigger: CCCCGGCTTCATGGGGATGCAGGAGAAGAAGCTGGG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTCGCCGGCGCCCAGCTTaGGTTCCCCATAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSRRRPA*VPHRRG
Trigger: ACCACGTCTATGGGGAACGCAAGCTGGGCGCCGGCG...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGTCCGCCTTCATGGCTaGAAAGCTCTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FGRLHGSRVWPRASCSASVRLHG*KALQLL
Trigger: GAGAAGCTGGAGAGCTTTGCAGCCATGAAGGCGGAC...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGTCCGCCTTCATGGCTaGAAAGCTCTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSVRLHG*KALQLL
Trigger: GAGAAGCTGGAGAGCTTTGCAGCCATGAAGGCGGAC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGGGCTGCAGGGAGCTaGCCGAGTCCGCCTTCATGG +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWGAAGS*PSPPSW
Trigger: CCATGAAGGCGGACTCGGGCAGCTCCCTGCAGCCCC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTCTTCCCACAGTACCTaGACGTGTATCGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASSHST*TCIAPC
Trigger: GCAAGGAGCGATACACGTGCAGGTACTGTGGGAAGA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGTGCTTCTTGAGGTaGCGGTCCAGGTTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSASCFLR*RSRLVC
Trigger: GCAGACCAACCTGGACCGGCACCTCAAGAAGCACGA...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGCGTTCTCGTGCTCGTaGTTCTTGAGGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGAFSCS*FLRCRS
Trigger: GGACCGGCACCTCAAGAAGCACGAGCACGAGAACGC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTACTGGTGCGTTCTCGTaGTCGTGCTTCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSTGAFS*SCFLRC
Trigger: GCACCTCAAGAAGCACGAGCACGAGAACGCACCAGT...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTCCTCCACGTCCTCCTaGTTCTCACTGGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATSSTSS*FSLARP
Trigger: AGGCCTAGCCAGTGAGAAGCAGGAGGACGTGGAGGA...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCACTTCCTCAGCTGCTCTaGGGAGGTCCAGCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQALPQLL*GGPAPS
Trigger: GGAAGGGGCTGGACCTCCGCAGAGCAGCTGAGGAAG...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGTCCTTCGTGGCTGGTaGCCTCGCTCTGGCCACCGG +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRVLRGW*PRSGHR
Trigger: CCGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGAC...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAG +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATLWTAT*MAVTEQ
Trigger: CTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGAGTCTCAGGCACAGGTaGGGCTTGGTGGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGSLRHR*GLVARS
Trigger: GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACT...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTAGGTGGGTCCTGTCTTaGCTCGTTGTGCAGATCTGG +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSRWVLS*LVVQIW
Trigger: CCAGATCTGCACAACGAGGCAAGACAGGACCCACCT...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCTGAGCAGTTGTGTTTaGAGATCCTGGATCCTTCCC +
Preference number: 4 (lower is better)
Translates to: FPSATPRGHPAVATSFCLLSSCV*RSWILP
Trigger: GGGAAGGATCCAGGATCTGCAAACACAACTGCTCAG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTGGCACGTCTTCAGTGCAAGCTCAGCATCCCTCGTaGCGAAAGCGCAGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: SVGLSLLQEPPRGTSSVQAQHPS*RKRSGN
Trigger: ATTGCCACTGCGCTTTCGGCACGAGGGATGCTGAGC...TTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTCGGGGATGGGCGACATaGCACTGTCCTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSRGWAT*HCPRPR
Trigger: ACGAGGCCGAGGACAGTGCCATGTCGCCCATCCCCG...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGTTGCACTCGTGGGCTTaGCCGCTGCCACCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGLHSWA*PLPPPR
Trigger: CCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAA...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCACAGTCCTTGCACTCGTaGGCTTGGCCGCTGCCACCG +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRAQSLHS*AWPLPP
Trigger: CGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTG...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGGCTTCACCGTGCTGTaGATATGCTTGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLGFTVL*ICLCCL
Trigger: CAAGCAGCACAAGCATATCCACAGCACGGTGAAGCC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCCGGGGGTACAAGGATaGAGGGAAGATGCCCGGGAA +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLPGVQG*REDARE
Trigger: TTCCCGGGCATCTTCCCTCCATCCTTGTACCCCCGG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGTTCCCCAGGGGACTaGGGAGCTTGGCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRGSPGD*GAWRPG
Trigger: CCCAGGACGCCAAGCTCCCCAGTCCCCTGGGGAACC...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAACCGAGCCCGTCCCCGTaGTCGTGTCCAGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQPSPSP*SCPGRS
Trigger: GGACCGACCTGGACACGACCACGGGGACGGGCTCGG...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGCCCCCAAACTTGGGCTaGCCCTCGGCGGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWPPNLG*PSADLP
Trigger: GGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGG...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTGGGGTGCTGGCTCACTaGTGCGTTCTCGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSGVLAH*CVLVLV
Trigger: CACGAGCACGAGAACGCACCAGTGAGCCAGCACCCC...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATCGTCTAAAAGTGCGTaGTTGTCCGACTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSASSKSA*LSDSEV
Trigger: CACCTCAGAGTCGGACAACCACGCACTTTTAGACGA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCGCTAGGCCTGGACACTaGGCACTGCCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSARPGH*ALPSTI
Trigger: GATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGC...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCCCCTGGGAGGGGGTGTaGAGAGGAGTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGPWEGV*RGVSSE
Trigger: TTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGG...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGCGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRRLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLSVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLSVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTCCGTTGGCTGTCTTTaGACGGCCACCTGCATGGCC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGSVGCL*TATCMA
Trigger: GGCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTATAATTGAGGGATCTTaGGTGGGGACCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGIIEGS*VGTCGF
Trigger: GAATCCACAGGTCCCCACCCAAGATCCCTCAATTAT...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGCACAGGTGCGGCTTaGTGGCCCGGAGCGATCCGC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLGTGAA*WPGAIR
Trigger: GCGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGTGCTGCACAGTTACATaGCCCCGTTACGGTGTGGTG +
Preference number: 4 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGCCTVT*PRYGVV
Trigger: CACCACACCGTAACGGGGCCATGTAACTGTGCAGCA...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 72 bp GTGCAAGCCTGGACCACCCGGCACCCACAGAGACGATaGTCTTTTGTCCTGGAGCAGCCAGGACACCTCCCG +
Preference number: 4 (lower is better)
Translates to: VQAWTTRHPQRR*SFVLEQPGHLP
Trigger: CGGGAGGTGTCCTGGCTGCTCCAGGACAAAAGACAATCGTCTCTGTGGGTGCCGGGTGGTCCAGGCTTGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp TCTGAGCCCCAGAAGGGGACGGAAAGACCGTCCTTCTATGCGCCTCAAGCCCAACTGCCAGCCCCCGCCTaGTTTGCATCCACGCAGAAC +
Preference number: 4 (lower is better)
Translates to: SEPQKGTERPSFYAPQAQLPAPA*FASTQN
Trigger: GTTCTGCGTGGATGCAAATCAGGCGGGGGCTGGCAG...TTGGGCTTGAGGCGCATAGAAGGACGGTCTTTCCGTCCCCTTCTGGGGCTCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR TCA 90 bp TGCCCCTGCCCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTCCACACGGATGTACTTaGGCCAGCTGCCAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: CPCPSASQRTTKDTLCKSPHGCT*ASCQPP
Trigger: CGGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGG...AGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGGGCAGGGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR TCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGAGCGGATGTGCCGCTaGAGGTTGCTGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWERMCR*RLLGSV
Trigger: CACGGACCCCAGCAACCTTCAGCGGCACATCCGCTC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGTCCCCGTGGTGGTGTTaGCGTCCTCAAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: SDVAPVTFNQASREPWEGSPWWC*RPQSHC
Trigger: GCAGTGACTTTGAGGACGTCAACACCACCACGGGGA...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGGTGGCGGGAAGAATaGGTGCTGGGAATAGAAGAC +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGWREE*VLGIED
Trigger: GTCTTCTATTCCCAGCACTCATTCTTCCCGCCACCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCACTCCCACGGGGTCTGTaGCCTTCCGCTTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQALPRGL*PSAFLP
Trigger: GGGTAGAAAAGCGGAAGGTCACAGACCCCGTGGGAG...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGTTCGAAGAGATGCTaGAGGAGCGGTCGCAGTACT +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGSKRC*RSGRST
Trigger: AGTACTGCGACCGCTCCTTCAGCATCTCTTCGAACC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGCACAGGTGGCACTTaGAAGGCTTCTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFCTGGT*KASPCC
Trigger: ACAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCA...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCACGCGTGAGAAGGCCTaGGCAGTTGTGTTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: TVSSIRSLRHRCGLVARSTREKA*AVVFAD
Trigger: ATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGT...GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTTGGGGCCTGGGGGTCTaGATGCTCAGGAGAAACTGG +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSWGLGV*MLRRNW
Trigger: CCAGTTTCTCCTGAGCATTCAGACCCCCAGGCCCCA...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACGGGCAGCATTTGGGCTaGACGGAAGGGCCCTGGACC +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDGQHLG*TEGPWT
Trigger: GGTCCAGGGCCCTTCCGTTCAGCCCAAATGCTGCCC...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATCGCAGAACTTCTCACTaGCCAGGTCTTCGGAGATCT +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHRRTSH*PGLRRS
Trigger: AGATCTCCGAAGACCTGGGCAGTGAGAAGTTCTGCG...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTGGATGACCATGTGCTaGTCCAGGCTGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLWMTMC*SRLYLL
Trigger: CAACAAGTACAGCCTGGAGCAGCACATGGTCATCCA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTCGCAGAAGCGCCGGTaGTTGTTGAGGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHSQKRR*LLREEV
Trigger: TACCTCCTCCCTCAACAAGCACCGGCGCTTCTGCGA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCGTCCTCAAAGTCACTaGCGTCCGACATGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLRPQSH*RPTCRC
Trigger: GCAGCGACATGTCGGACGGCAGTGACTTTGAGGACG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCGTCCGCCTTCATGGCTaGAAAGCTCTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSAVRLHG*KALQLL
Trigger: GAGAAGCTGGAGAGCTTTGCAGCCATGAAGGCGGAC...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGTGGATGTTCCGGACGTaGCGCTGGAGGTTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: SDVAPVTFNQASREPWEGWMFRT*RWRFEE
Trigger: CTCTTCGAACCTCCAGCGGCACGTCCGGAACATCCA...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCGGTCCAGGTTGGTCTaGTGCCCGAAGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGRSRLV*CPKQRL
Trigger: CAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCG...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCACTGGTGCGTTCTCGTaGTCGTGCTTCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GQSGSGWDSCTRGLVKEGTGAFS*SCFLRC
Trigger: GCACCTCAAGAAGCACGAGCACGAGAACGCACCAGT...GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGTGCTGGCTCACTGGTaGGTTCTCGTGCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGVLAHW*VLVLVL
Trigger: AAGCACGAGCACGAGAACGCACCAGTGAGCCAGCAC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTCTGCCGTCCACGATCTaGATGTCCGCCCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSLPSTI*MSARFS
Trigger: AGAGAAACGGGCGGACATGCAGATCGTGGACGGCAG...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCTGGACACTGGGCACTaGCGTCCACGATCTGCATGT +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLLDTGH*RPRSAC
Trigger: ACATGCAGATCGTGGACGGCAGTGCCCAGTGTCCAG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGTCCTCCACGTCCTCCTaGTTCTCACTGGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: SDVAPVTFNQASREPWEGSSTSS*FSLARP
Trigger: AGGCCTAGCCAGTGAGAAGCAGGAGGACGTGGAGGA...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGGGCTGTGCTGTCTCTaGTCCTTGCGGCAGGTTCCC +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGGLCCL*SLRQVP
Trigger: GGGAACCTGCCGCAAGGAGCAGAGACAGCACAGCCC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGGGACCACAATCCAGTaGTTTGAGGCTTCGAGTCTA +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLGTTIQ*FEASSL
Trigger: TAGACTCGAAGCCTCAAAGCACTGGATTGTGGTCCC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGTCGCCTTGGATCGCATaGTGTCGGCTCGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPSPWIA*CRLAES
Trigger: AGATTCCGCGAGCCGACACCATGCGATCCAAGGCGA...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTCGCCTTGGATCGCATaGTGTCGGCTCGCGGAATCT +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGSPWIA*CRLAES
Trigger: AGATTCCGCGAGCCGACACCATGCGATCCAAGGCGA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACGTGGCCCCACGGGGATaGGCGACATGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDVAPRG*ATWHCP
Trigger: AGGACAGTGCCATGTCGCCCATCCCCGTGGGGCCAC...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAGTGATGCAGCCTTCCTaGGGCGACACTTCCACGTCC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQAVMQPS*GDTSTS
Trigger: GGACGTGGAAGTGTCGCCCCAGGAAGGCTGCATCAC...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCAGCAGCTCCTCACCTaGCTCAATGTCCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAQQLLT*LNVLND
Trigger: GTCATTAAGGACATTGAGCCAGGTGAGGAGCTGCTG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTAGGTCCAGCTTGGACTaGAAGAGTTCGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSRSSLD*KSSSHS
Trigger: CGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCT...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCCACGTGTACTTCTTATaGCGCCGCAGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSAHVYFL*RRRSSL
Trigger: CAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTG...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCCAGGCTGTACTTGTTaGGGAACATCCGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATPGCTC*GTSARS
Trigger: ACTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCATCGCGCTCCTCCGTGTaGATGACCATGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQASRSSV*MTMCCS
Trigger: GGAGCAGCACATGGTCATCCACACGGAGGAGCGCGA...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTCGTGGGACATCTGGTaGCGGATGAGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATSWDIW*RMRLDF
Trigger: GAAGTCCAACCTCATCCGCCACCAGATGTCCCACGA...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCTGTCGTGGGACATCTaGTGGCGGATGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLLSWDI*WRMRLD
Trigger: GTCCAACCTCATCCGCCACCAGATGTCCCACGACAG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGGAGCTTGGCGTCCTaGGTGTGGTTCAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRGSLAS*VWFRGL
Trigger: GAGCCCCCTGAACCACACCCAGGACGCCAAGCTCCC...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCCCCCAAACTTGGGCTaGCCCTCGGCGGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLPPNLG*PSADLP
Trigger: GGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGAAGTTGGGCAGGAACTaGAAGGGGAACGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLKLGRN*KGNAEW
Trigger: CCACTCGGCGTTCCCCTTCCAGTTCCTGCCCAACTT...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGAGAAGGGCGAGGGCTTaGCGTAGTGGAGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRRRARA*RSGAGA
Trigger: AGCCCCCGCTCCACTACGCCAAGCCCTCGCCCTTCT...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGTCTATGGCTGACATCTaGGGGTGGAAGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLSMADI*GWKSSG
Trigger: CCCGCTGCTCTTCCACCCCCAGATGTCAGCCATAGA...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTCTATGGCTGACATCTaGGGGTGGAAGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHSMADI*GWKSSG
Trigger: CCCGCTGCTCTTCCACCCCCAGATGTCAGCCATAGA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGTTCCGGACGTGCCGCTaGAGGTTCGAAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLFRTCR*RFEEML
Trigger: CAGCATCTCTTCGAACCTCCAGCGGCACGTCCGGAA...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGGCTTCTCCTTGTTGTaGATGTTCCGGACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPGFSLL*MFRTCR
Trigger: GCGGCACGTCCGGAACATCCACAACAAGGAGAAGCC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGGGGTGCTGGCTCACTaGTGCGTTCTCGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSGVLAH*CVLVLV
Trigger: CACGAGCACGAGAACGCACCAGTGAGCCAGCACCCC...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGGACCCCGGGGTGCTaGCTCACTGGTGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWRTPGC*LTGAFS
Trigger: CGAGAACGCACCAGTGAGCCAGCACCCCGGGGTCCT...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTCGTCTAAAAGTGCGTaGTTGTCCGACTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLSSKSA*LSDSEV
Trigger: CACCTCAGAGTCGGACAACCACGCACTTTTAGACGA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTCCCTGGGAGGGGGTGTaGAGAGGAGTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSPWEGV*RGVSSE
Trigger: TTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGG...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GCCTCGTTGTGCAGATCTGGCGTGGGAGGAATCCCTTTCACTGTGATCCGTCGGGCGTCCAGAGAACCCTaGGAGGGGGTGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: ASLCRSGVGGIPFTVIRRASREP*EGVWRG
Trigger: TCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGC...CCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLRLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAACGCCTCCGTCCTTCGTaGCTGGTGCCCTCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQRLRPS*LVPSLW
Trigger: CCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCG...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTTGGGTGGGGACCTGTaGATTCCTCTGAAGGCCACG +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGLGGDL*IPLKAT
Trigger: CGTGGCCTTCAGAGGAATCCACAGGTCCCCACCCAA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATTGTGTTTGCAGATCCTaGATCCTTCCCGACACGCCA +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHCVCRS*ILPDTP
Trigger: TGGCGTGTCGGGAAGGATCCAGGATCTGCAAACACA...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 72 bp GGGAATAATTTAAAGCCCATCCGAGTGGGGAAGAAGTaGCGTCCCAAGAGAGGGAGGCGGCTGGGCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GNNLKPIRVGKK*RPKRGRRLGPG
Trigger: CCCCGGGCCCAGCCGCCTCCCTCTCTTGGGACGCAACTTCTTCCCCACTCGGATGGGCTTTAAATTATTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGCTCCTCCGTGTGGATaGCCATGTGCTGCTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWAPPCG*PCAAPG
Trigger: GCCTGGAGCAGCACATGGTCATCCACACGGAGGAGC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGGTTGCTGGGGTCCGTaGACACCTTCACGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPGCWGP*TPSRSF
Trigger: AAAACTGCGTGAAGGTGTTCACGGACCCCAGCAACC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGCAGACCTCACATATaGAAGGCTTCACCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGRPHI*KASPCC
Trigger: ACAGCACGGTGAAGCCTTTCATATGTGAGGTCTGCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACCCAGGCTGGCGTGATTaGGGCTGGGGGAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDPGWRD*GWGRVL
Trigger: CAAAACCCTCCCCCAGCCTCAATCACGCCAGCCTGG...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGCCAGGCTGGCGTGATTaGGGCTGGGGGAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWPGWRD*GWGRVL
Trigger: CAAAACCCTCCCCCAGCCTCAATCACGCCAGCCTGG...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCTCTCCTGCATCCCCATaGAGCCGGGGCCAAAGTACT +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSSPASP*SRGQST
Trigger: AGTACTTTGGCCCCGGCTTCATGGGGATGCAGGAGA...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGTCCTCAGGTGTCTGGTaGGATTGGCTGATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLSSGVW*DWLIWG
Trigger: TCCCCAGATCAGCCAATCTCACCAGACACCTGAGGA...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTTGCACAGGTGGCACTTaGAAGGCTTCTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSCTGGT*KASPCC
Trigger: ACAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCA...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCAATCCTTGGAGATGGTaGGACTCTACGACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVNPWRW*DSTTAL
Trigger: TAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATT...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTGATCTCTCTCTTTTaGGCACACCAGTCTATCCAT +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAVISLF*AHQSIH
Trigger: ATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCAC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCGTGATCTCTCTCTTTTaGGCACACCAGTCTATCCAT +
Preference number: 4 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPVISLF*AHQSIH
Trigger: ATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCAC...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGGCAGTTTCATGGCTTTTaGTACCCGGCTGACCTCCAC +
Preference number: 4 (lower is better)
Translates to: WPQRTHRWVLSCLVVQIWQFHGF*YPADLH
Trigger: GTGGAGGTCAGCCGGGTATCAAAAGCCATGAAACTG...CCAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GGGACGGGACAGAGGGGGCAGGGGACCACAATCCAGTGCTTTGAGGCTTCGAGTAGCCCCCGCCTGATTTaGATCCACGCAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: GTGQRGQGTTIQCFEASSSPRLI*IHAELL
Trigger: GAGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCT...ACTCGAAGCCTCAAAGCACTGGATTGTGGTCCCCTGCCCCCTCTGTCCCGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCAGCCCCCGCCTGATTTaGATCCACGCAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGSPRLI*IHAELL
Trigger: GAGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCT...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTGGATATGCTTGTGCTaGTTGAGGCCGGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGWICLC*LRPEDV
Trigger: CACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGTGGATATGCTTGTGCTaGTTGAGGCCGGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLWICLC*LRPEDV
Trigger: CACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCA...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCTGTGGATATGCTTGTaGTGCTTGAGGCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLLWICL*CLRPED
Trigger: GTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCGCGTGTAATGGTTCTTaGCCTCGCAGAAGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSACNGS*PRRSAG
Trigger: ACCGGCGCTTCTGCGAGGGCAAGAACCATTACACGC...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGCCCGGGGCAAAGATaGCGCCCGGCGTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLGPGQR*RPACNG
Trigger: ACCATTACACGCCGGGCGGCATCTTTGCCCCGGGCC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCTCGGGCCCCGCAGCTaGCGTCGTGCCCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLLGPRS*RRALAA
Trigger: AGCAGCCAGGGCACGACGGCAGCTGCGGGGCCCGAG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTCGTCCTCAAAGTCACTaGCGTCCGACATGTCGCTGC +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRRPQSH*RPTCRC
Trigger: GCAGCGACATGTCGGACGGCAGTGACTTTGAGGACG...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCTTCTCGGCAATGGATaGGATGGCCTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: AHWLILRGSSVGCLWTATLLGNG*DGLDGV
Trigger: GACTCCATCAAGGCCATCGCATCCATTGCCGAGAAG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGGGCCCGGCTGCCGATaGTCAGGTCCAGCGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPGPGCR*SGPAAA
Trigger: AGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCTGGATGTTCCGGACGTaGCGCTGGAGGTTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSWMFRT*RWRFEE
Trigger: CTCTTCGAACCTCCAGCGGCACGTCCGGAACATCCA...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGACTGGTGCGTTCTCGTaGTCGTGCTTCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPTGAFS*SCFLRC
Trigger: GCACCTCAAGAAGCACGAGCACGAGAACGCACCAGT...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCGTGCTGGCTCACTGGTaGGTTCTCGTGCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSVLAHW*VLVLVL
Trigger: AAGCACGAGCACGAGAACGCACCAGTGAGCCAGCAC...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGTGCTGGCTCACTGGTaGGTTCTCGTGCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRVLAHW*VLVLVL
Trigger: AAGCACGAGCACGAGAACGCACCAGTGAGCCAGCAC...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTCTGCCGTCCACGATCTaGATGTCCGCCCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSLPSTI*MSARFS
Trigger: AGAGAAACGGGCGGACATGCAGATCGTGGACGGCAG...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTTCCTCCACGTCCTCCTaGTTCTCACTGGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRSSTSS*FSLARP
Trigger: AGGCCTAGCCAGTGAGAAGCAGGAGGACGTGGAGGA...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCCAGCATCATTGCATATaGCTGGTTCTTAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: YPFPSATPRGHPAVATSFQHHCI*LVLSLP
Trigger: AGGCAGGCTAAGAACCAGGCATATGCAATGATGCTG...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000509860.1
CDS-3UTR GCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTGAGACTCTACGACTaGTTTAGGGACTTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAVRLYD*FRDFWD
Trigger: ATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCAC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGCCCGGCCACATCTCTaGATGGCGGATCCAAGCCAC +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWARPHL*MADPSH
Trigger: GTGGCTTGGATCCGCCATGCAGAGATGTGGCCGGGC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGCGATCCGCTGGGATTaGTCCCCAGGGCAGCCACGT +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLAIRWD*SPGQPR
Trigger: ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGAGGAGAAACTGGGCTTaGCATCATTTTCAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPERRNWA*HHFQGD
Trigger: GTCCCCCTGAAAATGATGGCAAGCCCAGTTTCTCCT...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTCTGGGCACCAACACTaGTGGGCAGAGCAAAACTGG +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHSGHQH*WAEQNW
Trigger: CCAGTTTTGCTCTGCCCAGCAGTGTTGGTGCCCAGA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTCGTCACCGTCACTTTTaGCTAGCTTCCTCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSRHRHF*LASSPS
Trigger: CGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACG...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCCGTCACCGTCACTTTTaGCTAGCTTCCTCGCCCTCG +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSRHRHF*LASSPS
Trigger: CGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACG...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCACCAGCAGGTCCCGGTTaGGCTCATACATATTATTTA +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAPAGPG*AHTYYL
Trigger: TAAATAATATGTATGAGCCCAACCGGGACCTGCTGG...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGCCAGCCCCTGGGATaGAGGACTCTCGGAGCTCGA +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLGQPLG*RTLGAR
Trigger: TCGAGCTCCGAGAGTCCTCCATCCCAGGGGCTGGCC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCAGACTCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGCACATGGTGAGGTTCTaGTCATCGCAGGAGCACGCC +
Preference number: 4 (lower is better)
Translates to: PDSDVAPVTFNQASREPWHMVRF*SSQEHA
Trigger: GGCGTGCTCCTGCGATGACCAGAACCTCACCATGTG...CCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCAGTCCTTGCACTCGTaGGCTTGGCCGCTGCCACCG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLQSLHS*AWPLPP
Trigger: CGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCCCAGGCTGTACTTGTTaGGGAACATCCGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGPGCTC*GTSARS
Trigger: ACTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGG...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCGCCGCCGTTTTGGCTaGCACGGGCCCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLRRRFG*HGPGCR
Trigger: TCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCGCCGCCGTTTTGGCTaGCACGGGCCCGGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATRRRFG*HGPGCR
Trigger: TCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGTGCCGGTCCAGGTTaGTCTGCTGCCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLGAGPG*SAARSS
Trigger: GCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGTGTCCGACTCTGAGGTaGGAGAGGACGCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRCPTLR*ERTRWS
Trigger: GGACCAGCGCGTCCTCTCCCACCTCAGAGTCGGACA...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGCGTCCAGAGAACCCTaGGAGGGGGTGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWASREP*EGVWRG
Trigger: TCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTCGGAATGAACCATGGTaGGTGGGGAGGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRRNEPW*VGRMLR
Trigger: CCTCAGCATCCTCCCCACCCACCATGGTTCATTCCG...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAAGCGGGCACCCGGCAGTaGCCACCAGCTTCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQAGTRQ*PPASVS
Trigger: TGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGC...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCAGGAGGGAAGGAAGATaGGTGCCCGGCCACATCTCT +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSRREGR*VPGHIS
Trigger: AGAGATGTGGCCGGGCACCCATCTTCCTTCCCTCCT...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCGCTGGGTTCCCGCGTaGGGTGGCCGAGGCAGGGAC +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLRWVPA*GGRGRD
Trigger: GTCCCTGCCTCGGCCACCCCACGCGGGAACCCAGCG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGAGACCCAGGACGTaGCCAAGGCCCTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLGRPRT*PRPCLQ
Trigger: CTGAAGGCAGGGCCTTGGCCACGTCCTGGGTCTCCC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACACCCAGGGGATGTTGTaGAAACGCGTGAGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CPLADSARQLRWLSLDGHTQGML*KRVRRP
Trigger: AGGCCTTCTCACGCGTTTCCACAACATCCCCTGGGT...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGGCGGTGTGGTGACAGCTaGAGGCCAGAATCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: WPQRTHRWVLSCLVVQIWRCGDS*RPESLN
Trigger: ATTCAGAGATTCTGGCCTCCAGCTGTCACCACACCG...CCAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGAAGGCCTCTCCAGCTaGGCAGTCTCTCAGGCCACA +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGEGLSS*AVSQAT
Trigger: TGTGGCCTGAGAGACTGCCCAGCTGGAGAGGCCTTC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 72 bp CCTACGGGGTACCTGGTGGGTCTGACCCAGGGGATGTaGTGGAAACGCGTGAGAAGGCCTGAGCAGTTGTGT +
Preference number: 4 (lower is better)
Translates to: PTGYLVGLTQGM*WKRVRRPEQLC
Trigger: ACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCCCTGGGTCAGACCCACCAGGTACCCCGTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGAGCGCAGCCCCCACTaGGCCACACGTGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRERSPH*ATRVLL
Trigger: AAGAAGTACACGTGTGGCTCAGTGGGGGCTGCGCTC...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGGGCAGACCTCACATATaGAAGGCTTCACCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLGRPHI*KASPCC
Trigger: ACAGCACGGTGAAGCCTTTCATATGTGAGGTCTGCC...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGGGCAGACCTCACATATaGAAGGCTTCACCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLGRPHI*KASPCC
Trigger: ACAGCACGGTGAAGCCTTTCATATGTGAGGTCTGCC...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGTTCAGGGGGCTCTTaGGCAGCGATGTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRGSGGS*AAMWEV
Trigger: TACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACC...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTCATGGTCTCTATGGCTaGCATCTGGGGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSHGLYG*HLGVEE
Trigger: CTCTTCCACCCCCAGATGTCAGCCATAGAGACCATG...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp AGCGGAGGGCAGGTGCGAGGAGGCCTCCTTCGGAATTTCCATTTGGGGGATGGGTCTGGTGAGATTGGCTaGTCTGGGGAAGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: SGGQVRGGLLRNFHLGDGSGEIG*SGEDLP
Trigger: GGGAAGATCTTCCCCAGATCAGCCAATCTCACCAGA...CCCATCCCCCAAATGGAAATTCCGAAGGAGGCCTCCTCGCACCTGCCCTCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTCTGGTGAGATTGGCTaGTCTGGGGAAGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGSGEIG*SGEDLP
Trigger: GGGAAGATCTTCCCCAGATCAGCCAATCTCACCAGA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGTTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLLEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGCCACGTGGCGGTCCTaGCACCAATTCCATGTCACA +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRAATWRS*HQFHVT
Trigger: TGTGACATGGAATTGGTGTCAGGACCGCCACGTGGC...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACCTGGCTTGCAGCCCTaGCCCTGGCCACCTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPPGLQP*PWPPGH
Trigger: ATGGCCAGGTGGCCAGGGTCAGGGCTGCAAGCCAGG...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGTTTAAATTACGACTCTaGCACCAGGGCTCAGCATCC +
Preference number: 4 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGFKLRL*HQGSAS
Trigger: GGATGCTGAGCCCTGGTGTCAGAGTCGTAATTTAAA...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCGGCCGGGCGGCACTGTaGCCAGGGGGTAGACGCCTT +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATGRAAL*PGGRRL
Trigger: AAGGCGTCTACCCCCTGGGCACAGTGCCGCCCGGCC...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGTGTGGATGACCATGTaGTGCTCCAGGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPVWMTM*CSRLYL
Trigger: CAAGTACAGCCTGGAGCAGCACATGGTCATCCACAC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGGTGTGGATGACCATGTaGTGCTCCAGGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLVWMTM*CSRLYL
Trigger: CAAGTACAGCCTGGAGCAGCACATGGTCATCCACAC...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGCGTGCATCCGCTTGTaGCGGCACAGGTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWACIRL*RHRLEN
Trigger: GTTCTCCAACCTGTGCCGGCACAAGCGGATGCACGC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTTCGCAGAAGCGCCGGTaGTTGTTGAGGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSSQKRR*LLREEV
Trigger: TACCTCCTCCCTCAACAAGCACCGGCGCTTCTGCGA...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGCGTGTAATGGTTCTTaGCCTCGCAGAAGCGCCGGT +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGACNGS*PRRSAG
Trigger: ACCGGCGCTTCTGCGAGGGCAAGAACCATTACACGC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTCGTCCGACATGTCGCTaGTCCTGGTCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRRPTCR*SWSSAS
Trigger: AGAAGCTGAAGACCAGGAGCAGCGACATGTCGGACG...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGCGGCGGACTTGCCCTTaGCCTTGTCCTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWRRTCP*PCPCQG
Trigger: ACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCG...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGCCCAGCTTCTTCTCCTaGATCCCCATGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRPSFFS*IPMKPG
Trigger: CCCCGGCTTCATGGGGATGCAGGAGAAGAAGCTGGG...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCTCAGGTCCAGCGGCTaGTCCTCGCCGGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLLRSSG*SSPDAG
Trigger: CCCCGCATCCGGCGAGGAGCAGCCGCTGGACCTGAG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACATAGACGTGGTTCTTaGGGGGCTCCCGCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPHRRGS*GAPARR
Trigger: GCGGCGGGCGGGAGCCCCGCAAGAACCACGTCTATG...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGTGGATGTTCCGGACGTaGCGCTGGAGGTTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGWMFRT*RWRFEE
Trigger: CTCTTCGAACCTCCAGCGGCACGTCCGGAACATCCA...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAACTGGTGCGTTCTCGTaGTCGTGCTTCTTGAGGTGC +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQATGAFS*SCFLRC
Trigger: GCACCTCAAGAAGCACGAGCACGAGAACGCACCAGT...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GCCTCGTTGTGCAGATCTGGCGTGGGAGGAATCCCTTTCACTGTGATCCGTCGGGGGAAGGAAGATGGGTaGCCGGCCACATCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: ASLCRSGVGGIPFTVIRRGKEDG*PATSLH
Trigger: ATGCAGAGATGTGGCCGGGCACCCATCTTCCTTCCC...CCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTACGTGGCCAAGGCCCTaGCTTCAGAGGACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: HISAWRIQATGPRLPHIITWPRP*LQRTAL
Trigger: CAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGT...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCCAGCAGCTCCTCACCTaGCTCAATGTCCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: FFGRLHGSRVWPRASCSAQQLLT*LNVLND
Trigger: GTCATTAAGGACATTGAGCCAGGTGAGGAGCTGCTG...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGAGGTCCAGCTTGGACTaGAAGAGTTCGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPRSSLD*KSSSHS
Trigger: CGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCT...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGTCGCGCTCCTCCGTGTaGATGACCATGTGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRSRSSV*MTMCCS
Trigger: GGAGCAGCACATGGTCATCCACACGGAGGAGCGCGA...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCAAGGCCTTGGGACACTaGTCGCATTTGTACTCGCGC +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSKALGH*SHLYSR
Trigger: GCGCGAGTACAAATGCGACCAGTGTCCCAAGGCCTT...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTTCGTGGGACATCTGGTaGCGGATGAGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSSWDIW*RMRLDF
Trigger: GAAGTCCAACCTCATCCGCCACCAGATGTCCCACGA...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACCGTTTGCCGCTGTCGTaGGACATCTGGTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDRLPLS*DIWWRM
Trigger: CATCCGCCACCAGATGTCCCACGACAGCGGCAAACG...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGCGTTTGCCGCTGTCGTaGGACATCTGGTGGCGGATG +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWRLPLS*DIWWRM
Trigger: CATCCGCCACCAGATGTCCCACGACAGCGGCAAACG...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGGACTGGGGAGCTTaGCGTCCTGGGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLGDWGA*RPGCGS
Trigger: TGAACCACACCCAGGACGCCAAGCTCCCCAGTCCCC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACCGAGCCCGTCCCCGTaGTCGTGTCCAGGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRPSPSP*SCPGRS
Trigger: GGACCGACCTGGACACGACCACGGGGACGGGCTCGG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGAAGTTGGGCAGGAACTaGAAGGGGAACGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGKLGRN*KGNAEW
Trigger: CCACTCGGCGTTCCCCTTCCAGTTCCTGCCCAACTT...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGCTGTCATGGTCTCTATaGCTGACATCTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SDVAPVTFNQASREPWEGLSWSL*LTSGGG
Trigger: TCCACCCCCAGATGTCAGCCATAGAGACCATGACAG...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCACCGAGTCCGCCTTCATaGCTGCAAAGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRAPSPPS*LQSSPA
Trigger: AGCTGGAGAGCTTTGCAGCCATGAAGGCGGACTCGG...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGGTGCTGGCTCACTaGTGCGTTCTCGTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLGVLAH*CVLVLV
Trigger: CACGAGCACGAGAACGCACCAGTGAGCCAGCACCCC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGTGTCCGACTCTGAGGTaGGAGAGGACGCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLCPTLR*ERTRWS
Trigger: GGACCAGCGCGTCCTCTCCCACCTCAGAGTCGGACA...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAAGTCGGAATGAACCATaGTGGGTGGGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQASRNEP*WVGRML
Trigger: CAGCATCCTCCCCACCCACCATGGTTCATTCCGACT...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTAGTCGGAATGAACCATaGTGGGTGGGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRSRNEP*WVGRML
Trigger: CAGCATCCTCCCCACCCACCATGGTTCATTCCGACT...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 4 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSACFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 4 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAGGTTCCCGCGTGGGGTaGCCGAGGCAGGGACAGAGG +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRGSRVG*PRQGQR
Trigger: CCTCTGTCCCTGCCTCGGCCACCCCACGCGGGAACC...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCTTTTGCAGACGCTCATaGGGAAGCGGGGAAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSFCRRS*GSGEGR
Trigger: TCTGCCTTCCCCGCTTCCCCATGAGCGTCTGCAAAA...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGATTTCCGTATTAATTaGGAACTGCGCCTCTTTCGC +
Preference number: 4 (lower is better)
Translates to: TPVYPFPSATPRGHPAVADFRIN*ELRLFR
Trigger: GCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGATCTGCTCACTGATCTaGCACATGGTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SDVAPVTFNQASREPWEGICSLI*HMVRFW
Trigger: CCAGAACCTCACCATGTGTCAGATCAGTGAGCAGAT...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCCTGGCTGCTGTTGCTaGCGGCGGAGACCAGGGGCA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLPGCCC*RRRPGA
Trigger: TGCCCCTGGTCTCCGCCGTCAGCAACAGCAGCCAGG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGACTTTGGCTCGGCCTTaGCCAGCAAGTTGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRTLARP*PASCGR
Trigger: TCGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGT...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCTCCCACGGGGTCTGTaGCCTTCCGCTTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLLPRGL*PSAFLP
Trigger: GGGTAGAAAAGCGGAAGGTCACAGACCCCGTGGGAG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCATGGTCTCTATGGCTaGCATCTGGGGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGHGLYG*HLGVEE
Trigger: CTCTTCCACCCCCAGATGTCAGCCATAGAGACCATG...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGTTCGAAGAGATGCTaGAGGAGCGGTCGCAGTACT +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRAGSKRC*RSGRST
Trigger: AGTACTGCGACCGCTCCTTCAGCATCTCTTCGAACC...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGTGCACAGGTGGCACTTaGAAGGCTTCTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLCTGGT*KASPCC
Trigger: ACAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCA...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATGTGATCTCTCTCTTTTaGGCACACCAGTCTATCCAT +
Preference number: 4 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDVISLF*AHQSIH
Trigger: ATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCAC...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGTGATCTCTCTCTTTTaGGCACACCAGTCTATCCAT +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSVISLF*AHQSIH
Trigger: ATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCAC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGAATCCCTTTCACTGTaGTCCGTCGGGTTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGESLSL*SVGLSL
Trigger: GAGGCTCAACCCGACGGATCACAGTGAAAGGGATTC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACGCTGAAAAGACACGCTaGGGGCTCCATCCGTCCGAA +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDAEKTR*GLHPSE
Trigger: TTCGGACGGATGGAGCCCTCAGCGTGTCTTTTCAGC...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp TCGCATCCCTGTCCATGCTGCACAGTTACATGGCCCCGTTACGGTGTGGTGACAAAGAACAGGGCCTCCTaGAAACGCCAAGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SHPCPCCTVTWPRYGVVTKNRAS*KRQVLG
Trigger: CCCCAGCACTTGGCGTTTTCAGGAGGCCCTGTTCTT...TGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGAGGCCAGAATCTCTaGATTCTCACACCCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWGGQNL*ILTPGP
Trigger: TGGCCCGGGTGTGAGAATTCAGAGATTCTGGCCTCC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTGAGCCCCAGCACACTCTGCAAATCTaGGCCCCAGAAGGGGACGGA +
Preference number: 4 (lower is better)
Translates to: PSASQRTTKDTLCKSEPQHTLQI*APEGDG
Trigger: TCCGTCCCCTTCTGGGGCTCAGATTTGCAGAGTGTG...CTGGGGCTCAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR GCA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTTCGGAGCTCGAAGTCTaGTGGGATCGGAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSSELEV*WDRNVF
Trigger: GAAGACATTCCGATCCCAGCAGACTTCGAGCTCCGA...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCGTGGGCTTGGCCGCTaGCACCGCCAAGGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFRGLGR*HRQGPR
Trigger: CCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGTGGATGACCATGTGCTaGTCCAGGCTGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPWMTMC*SRLYLL
Trigger: CAACAAGTACAGCCTGGAGCAGCACATGGTCATCCA...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGTTGATGGGGTGAAATaGTCCAGACTCCGACGTGGC +
Preference number: 4 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSVDGVK*SRLRRG
Trigger: GCCACGTCGGAGTCTGGAGCATTTCACCCCATCAAC...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GCCTCGTTGTGCAGATCTGGCGTGGGAGGAATCCCTTTCACTGTGATCCGTCGGGCCTGGGGGTCTGAATaGTCAGGAGAAACTGGGCTT +
Preference number: 4 (lower is better)
Translates to: ASLCRSGVGGIPFTVIRRAWGSE*SGETGL
Trigger: AAGCCCAGTTTCTCCTGAGCATTCAGACCCCCAGGC...CCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CCAGACTCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGCTCGAAGTCTGCTaGGATCGGAATGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PDSDVAPVTFNQASREPWELEVC*DRNVFR
Trigger: CCTGAAGACATTCCGATCCCAGCAGACTTCGAGCTC...CCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCTTCCATCTTCCTCTTaGCCCAGACCCCCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLLPSSS*PRPPGQ
Trigger: CTGGCCTGGGGGTCTGGGCCAAGAGGAAGATGGAAG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCCGCAGGTCCAGCTTaGACTGGAAGAGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRAAGPA*TGRVRH
Trigger: GTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGC...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACGTGTACTTCTTATaGCGCCGCAGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGHVYFL*RRRSSL
Trigger: CAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTG...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTTCGTGGGACATCTGGTaGCGGATGAGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSSWDIW*RMRLDF
Trigger: GAAGTCCAACCTCATCCGCCACCAGATGTCCCACGA...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACCTGTCGTGGGACATCTaGTGGCGGATGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDLSWDI*WRMRLD
Trigger: GTCCAACCTCATCCGCCACCAGATGTCCCACGACAG...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGGGAGCTTGGCGTCCTaGGTGTGGTTCAGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPGSLAS*VWFRGL
Trigger: GAGCCCCCTGAACCACACCCAGGACGCCAAGCTCCC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGGTTCCCCAGGGGACTaGGGAGCTTGGCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLGSPGD*GAWRPG
Trigger: CCCAGGACGCCAAGCTCCCCAGTCCCCTGGGGAACC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAGGTTCCCCAGGGGACTaGGGAGCTTGGCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRGSPGD*GAWRPG
Trigger: CCCAGGACGCCAAGCTCCCCAGTCCCCTGGGGAACC...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCCCCAAACTTGGGCTaGCCCTCGGCGGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATPPNLG*PSADLP
Trigger: GGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACCCCCAAACTTGGGCTaGCCCTCGGCGGACTTGCCC +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRPPNLG*PSADLP
Trigger: GGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCAGCCGCCCCCAAACTTaGGCTGGCCCTCGGCGGACT +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLSRPQT*AGPRRT
Trigger: AGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCT...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGTTGACCAGCAAGTTGTaGGCGAGGGCTCGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLLTSKL*ARARSV
Trigger: CACGGACCGAGCCCTCGCCCACAACTTGCTGGTCAA...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGCTGACATCTGGGGGTaGAAGAGCAGCGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPADIWG*KSSGDG
Trigger: GCCGTCCCCGCTGCTCTTCCACCCCCAGATGTCAGC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGGTGCCGGTCCAGGTTaGTCTGCTGCCCGAAGCAGC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPGAGPG*SAARSS
Trigger: GCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACAACAGACCGCCTTCGTaGTCCTCAGCACACCTTCGG +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDNRPPS*SSAHLR
Trigger: CCGAAGGTGTGCTGAGGACCACGAAGGCGGTCTGTT...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCCCTGGGAGGGGGTGTaGAGAGGAGTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLPWEGV*RGVSSE
Trigger: TTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTGCGAGGCAGCTCCGTTaGCTGTCTTTGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: HISAWRIQATGPRLPHIIARQLR*LSLDGH
Trigger: GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGC...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTTCAGAGGACGGCGCTaGGTTCCCGCGTGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATFRGRR*VPAWGG
Trigger: GCCACCCCACGCGGGAACCCAGCGCCGTCCTCTGAA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAACGGCGGGATGGGACTaGGGGATCCGGAGACCAACG +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPTAGWD*GIRRPT
Trigger: CGTTGGTCTCCGGATCCCCCAGTCCCATCCCGCCGT...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTAAGTCAGTGATATCTTaGGTCCCACTCATGAAGGGT +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSKSVIS*VPLMKG
Trigger: ACCCTTCATGAGTGGGACCCAAGATATCACTGACTT...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp ATGTCCACACGTGACACAAACCCACACCAAGGCGGCTTGCACCACTCCTGTTTGGGACGCCAGGGCCCTTaGAATTTCCAGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: MSTRDTNPHQGGLHHSCLGRQGP*NFQGWT
Trigger: AGTCCAGCCCTGGAAATTCCAAGGGCCCTGGCGTCC...CAAACAGGAGTGGTGCAAGCCGCCTTGGTGTGGGTTTGTGTCACGTGTGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTGGAGCAGCTATGTCCTaGCGTCCCTGGCTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: HISAWRIQATGPRLPHIIGAAMS*RPWLGG
Trigger: TCCTCCCAGCCAGGGACGCCAGGACATAGCTGCTCC...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACCAGGCTGGCGTGATTaGGGCTGGGGGAGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPPGWRD*GWGRVL
Trigger: CAAAACCCTCCCCCAGCCTCAATCACGCCAGCCTGG...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAATCCCCGTGGTGGTGTTaGCGTCCTCAAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQSPWWC*RPQSHC
Trigger: GCAGTGACTTTGAGGACGTCAACACCACCACGGGGA...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGGTGGCGGGAAGAATaGGTGCTGGGAATAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRGWREE*VLGIED
Trigger: GTCTTCTATTCCCAGCACTCATTCTTCCCGCCACCC...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGAGGTGGTTGATGGGGTaGAATGCTCCAGACTCCGAC +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRRWLMG*NAPDSD
Trigger: GTCGGAGTCTGGAGCATTTCACCCCATCAACCACCT...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAACTTTTGTTCACAAGTaGATCACACGTTTGGAAACT +
Preference number: 4 (lower is better)
Translates to: LPRPHAGTRQWPPASVSATFVHK*ITRLET
Trigger: AGTTTCCAAACGTGTGATTCACTTGTGAACAAAAGT...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp CCTGCCCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTGAGCAGCCCCCGCCTGATTTaGATCCACGCAGAACTTCTC +
Preference number: 4 (lower is better)
Translates to: PARQLPNGRLRTHSANLSSPRLI*IHAELL
Trigger: GAGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCT...GCTCAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGGGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATCCGCTCGCAGTCCTTaGACTCGTGGGCTTGGCCGC +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRSARSP*TRGLGR
Trigger: GCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCGCCCGAGCGCCCACGTaGTGCGAGCGGATGTGCCGC +
Preference number: 4 (lower is better)
Translates to: HRSVILRGFFISTLRDKVARAPT*CERMCR
Trigger: GCGGCACATCCGCTCGCAGCACGTGGGCGCTCGGGC...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCTTCTCGGCAATGGATaGGATGGCCTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGLLGNG*DGLDGV
Trigger: GACTCCATCAAGGCCATCGCATCCATTGCCGAGAAG...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACGCCGGCGCCCAGCTTaGGTTCCCCATAGACGTGGT +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRRRRPA*VPHRRG
Trigger: ACCACGTCTATGGGGAACGCAAGCTGGGCGCCGGCG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGACACGGTGTCATCCTaGGACTTCCCGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPDTVSS*DFPARL
Trigger: CAGCCTGGCCGGGAAGTCGCAGGATGACACCGTGTC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTGCTTAAATAGACTCTaGAGTCAATACGGTTACCAA +
Preference number: 4 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVCLNRL*SQYGYQ
Trigger: TTGGTAACCGTATTGACTGCAGAGTCTATTTAAGCA...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCACGTGGCCAAGGCCCTaGCTTCAGAGGACGGCGCTG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATTWPRP*LQRTAL
Trigger: CAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGT...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCACACACCAAGGCGGCTTaGACCACTCCTGTTTGTATT +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQAHTKAA*TTPVCI
Trigger: AATACAAACAGGAGTGGTGCAAGCCGCCTTGGTGTG...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCGTGGCCCCACGGGGATaGGCGACATGGCACTGTCCT +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATVAPRG*ATWHCP
Trigger: AGGACAGTGCCATGTCGCCCATCCCCGTGGGGCCAC...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp AGCCCCAGAAGGGGACGGAAAGACCGTCCTTCTATGCGCCTCAAGCCCAATTTTCACATGGTGAGGTTCTaGTCATCGCAGGAGCACGCC +
Preference number: 4 (lower is better)
Translates to: SPRRGRKDRPSMRLKPNFHMVRF*SSQEHA
Trigger: GGCGTGCTCCTGCGATGACCAGAACCTCACCATGTG...AAAATTGGGCTTGAGGCGCATAGAAGGACGGTCTTTCCGTCCCCTTCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTTGCACTCGTGGGCTTaGCCGCTGCCACCGCCAAGG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLLHSWA*PLPPPR
Trigger: CCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGCCAGGCTGTACTTGTTaGGGAACATCCGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRPGCTC*GTSARS
Trigger: ACTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGG...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAAGGCCTTGGGACACTaGTCGCATTTGTACTCGCGC +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWKALGH*SHLYSR
Trigger: GCGCGAGTACAAATGCGACCAGTGTCCCAAGGCCTT...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACTCGTGGGACATCTGGTaGCGGATGAGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDSWDIW*RMRLDF
Trigger: GAAGTCCAACCTCATCCGCCACCAGATGTCCCACGA...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAACTGTCGTGGGACATCTaGTGGCGGATGAGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQLSWDI*WRMRLD
Trigger: GTCCAACCTCATCCGCCACCAGATGTCCCACGACAG...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCAGAAGGGCGAGGGCTTaGCGTAGTGGAGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATRRARA*RSGAGA
Trigger: AGCCCCCGCTCCACTACGCCAAGCCCTCGCCCTTCT...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCGCTGACATCTGGGGGTaGAAGAGCAGCGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATADIWG*KSSGDG
Trigger: GCCGTCCCCGCTGCTCTTCCACCCCCAGATGTCAGC...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCAGGACCCCGGGGTGCTaGCTCACTGGTGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLRTPGC*LTGAFS
Trigger: CGAGAACGCACCAGTGAGCCAGCACCCCGGGGTCCT...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCGGAATGAACCATGGTaGGTGGGGAGGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLRNEPW*VGRMLR
Trigger: CCTCAGCATCCTCCCCACCCACCATGGTTCATTCCG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGCGAGGCAGCTCCGTTaGCTGTCTTTGGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPARQLR*LSLDGH
Trigger: GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCATAATTGAGGGATCTTaGGTGGGGACCTGTGGATTC +
Preference number: 4 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGIIEGS*VGTCGF
Trigger: GAATCCACAGGTCCCCACCCAAGATCCCTCAATTAT...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAAATATGCCTTCGGGTGTaGTCAAAGCCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQICLRV*SKPTAR
Trigger: CCTGGCCGTGGGCTTTGACCACACCCGAAGGCATAT...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
3UTR CAA 72 bp TTGTGGAAACGCGTGAGAAGGCCTGAGCAGTTGTGTTaGCAGATCCTGGATCCTTCCCGACACGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LWKRVRRPEQLC*QILDPSRHASW
Trigger: CCAGCTGGCGTGTCGGGAAGGATCCAGGATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 72 bp GGGATGTTGTGGAAACGCGTGAGAAGGCCTGAGCAGTaGTGTTTGCAGATCCTGGATCCTTCCCGACACGCC +
Preference number: 4 (lower is better)
Translates to: GMLWKRVRRPEQ*CLQILDPSRHA
Trigger: GGCGTGTCGGGAAGGATCCAGGATCTGCAAACACAACTGCTCAGGCCTTCTCACGCGTTTCCACAACATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 72 bp AGGGGCTCGATCCTCTGGGTTGAAGTCAGTGATATCTaGGGTCCCACTCATGAAGGGTCTGCCAGGCCCACA +
Preference number: 4 (lower is better)
Translates to: RGSILWVEVSDI*GPTHEGSARPT
Trigger: TGTGGGCCTGGCAGACCCTTCATGAGTGGGACCCAAGATATCACTGACTTCAACCCAGAGGATCGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCAAGGCCCTCGGGCTTaGGCTCCTCAGCCAGGCCCT +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFQGPRA*APQPGP
Trigger: AGGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGTGGCGGGAAGAATaGGTGCTGGGAATAGAAGAC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLGWREE*VLGIED
Trigger: GTCTTCTATTCCCAGCACTCATTCTTCCCGCCACCC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACTCCCACGGGGTCTGTaGCCTTCCGCTTTTCTACCC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPLPRGL*PSAFLP
Trigger: GGGTAGAAAAGCGGAAGGTCACAGACCCCGTGGGAG...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCGTGCTCGTGCTTCTTaGGGTGCCGGTCCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATRARAS*GAGPGW
Trigger: CCAACCTGGACCGGCACCTCAAGAAGCACGAGCACG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGAGGTGGTTGATGGGGTaGAATGCTCCAGACTCCGAC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLRWLMG*NAPDSD
Trigger: GTCGGAGTCTGGAGCATTTCACCCCATCAACCACCT...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCACTCGGGTTTGCAAATaGGCTCAAATTTCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: TVSSIRSLRHRCGLVARSTRVCK*AQISKQ
Trigger: TTGCTTTGAAATTTGAGCTCATTTGCAAACCCGAGT...GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TTCTCCCACAGCGATTTCCGTATTAATTGGGAACTGCGCCTCTTTCGCGTCAGCGCAGGAAGAGCGACGTaGCGACTGTGTCGTCCATCC +
Preference number: 4 (lower is better)
Translates to: FSHSDFRINWELRLFRVSAGRAT*RLCRPS
Trigger: GGATGGACGACACAGTCGTCACGTCGCTCTTCCTGC...GCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGCGGCACAGGTCTGTaGTTCTGCGAGGATTCTTTA +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWGGTGL*FCEDSL
Trigger: TAAAGAATCCTCGCAGAATCACAGACCTGTGCCGCC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGTCGGAGCTCGAAGTCTaGTGGGATCGGAATGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRSELEV*WDRNVF
Trigger: GAAGACATTCCGATCCCAGCAGACTTCGAGCTCCGA...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGCACATTCGAAGCGTTTaGCGCTGTCGTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRHIRSV*RCRGTS
Trigger: AGATGTCCCACGACAGCGGCAAACGCTTCGAATGTG...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGCACATTCGAAGCGTTTaGCGCTGTCGTGGGACATCT +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWHIRSV*RCRGTS
Trigger: AGATGTCCCACGACAGCGGCAAACGCTTCGAATGTG...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCTGTGGATATGCTTGTaGTGCTTGAGGCCGGAGGAC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLLWICL*CLRPED
Trigger: GTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGACCGTGCTGTGGATATaGTTGTGCTGCTTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLTVLWI*LCCLRP
Trigger: CGGCCTCAAGCAGCACAAGCATATCCACAGCACGGT...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAAACCGTGCTGTGGATATaGTTGTGCTGCTTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQTVLWI*LCCLRP
Trigger: CGGCCTCAAGCAGCACAAGCATATCCACAGCACGGT...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCATCCTTGCACTTGATCTaGGTGCGGCAGTCGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPSLHLI*VRQSAC
Trigger: GCACGCCGACTGCCGCACGCAGATCAAGTGCAAGGA...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTTCGCAGAAGCGCCGGTaGTTGTTGAGGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: HISAWRIQATGPRLPHIISQKRR*LLREEV
Trigger: TACCTCCTCCCTCAACAAGCACCGGCGCTTCTGCGA...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCGTCCGACATGTCGCTaGTCCTGGTCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLRPTCR*SWSSAS
Trigger: AGAAGCTGAAGACCAGGAGCAGCGACATGTCGGACG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCTCCCACAGCGATTTCCGTATTAATTGGGAACTGCGCCTCTTTCGCGTCAGCCCCAGCTTCTTCTCCTaGATCCCCATGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: FSHSDFRINWELRLFRVSPSFFS*IPMKPG
Trigger: CCCCGGCTTCATGGGGATGCAGGAGAAGAAGCTGGG...GCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGTTGATGGGGTGAAATaGTCCAGACTCCGACGTGGC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLVDGVK*SRLRRG
Trigger: GCCACGTCGGAGTCTGGAGCATTTCACCCCATCAAC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGGTGAGACTCTACGACTaGTTTAGGGACTTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLVRLYD*FRDFWD
Trigger: ATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCAC...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACCCACAAGGCTGCAGTaGAGGGGCGAGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRPTRLQ*RGELCS
Trigger: AGAGCAGAGCTCGCCCCTGCACTGCAGCCTTGTGGG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACGAGCTCGAAGTCTGCTaGGATCGGAATGTCTTCAGG +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDELEVC*DRNVFR
Trigger: CCTGAAGACATTCCGATCCCAGCAGACTTCGAGCTC...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTCAGCAGCTCCTCACCTaGCTCAATGTCCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSQQLLT*LNVLND
Trigger: GTCATTAAGGACATTGAGCCAGGTGAGGAGCTGCTG...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGGTCCAGCTTGGACTaGAAGAGTTCGTCACACTCG +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWRSSLD*KSSSHS
Trigger: CGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCT...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCACGTGTACTTCTTATaGCGCCGCAGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLHVYFL*RRRSSL
Trigger: CAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCCAGGCTGTACTTGTTaGGGAACATCCGCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLPGCTC*GTSARS
Trigger: ACTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGGGGACTGGGGAGCTTaGCGTCCTGGGTGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLGDWGA*RPGCGS
Trigger: TGAACCACACCCAGGACGCCAAGCTCCCCAGTCCCC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTGTCCGACTCTGAGGTaGGAGAGGACGCGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATCPTLR*ERTRWS
Trigger: GGACCAGCGCGTCCTCTCCCACCTCAGAGTCGGACA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAGCACACCTTCGGGTGTaGTCAAAGCCCACGGCCAGG +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRAHLRV*SKPTAR
Trigger: CCTGGCCGTGGGCTTTGACCACACCCGAAGGTGTGC...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR CCA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 4 (lower is better)
Translates to: DCVVHPESQAQVRLGGPEDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGCTTATCACACGGTTTTaGTCCTTCACCAGATACTTA +
Preference number: 4 (lower is better)
Translates to: FGRLHGSRVWPRASCSASLITRF*SFTRYL
Trigger: TAAGTATCTGGTGAAGGACCAAAACCGTGTGATAAG...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp AGCGGAGGGCAGGTGCGAGGAGGCCTCCTTCGGAATTTCCATTTGGGGGATGGGTTCGGAATTTCCATTTaGGGGATGGGGGTTGACAAT +
Preference number: 4 (lower is better)
Translates to: SGGQVRGGLLRNFHLGDGFGISI*GMGVDN
Trigger: ATTGTCAACCCCCATCCCCCAAATGGAAATTCCGAA...CCCATCCCCCAAATGGAAATTCCGAAGGAGGCCTCCTCGCACCTGCCCTCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCCTGGCGTCCCTGGCTaGGAGGAGAGCCTTGCCCTC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFPGVPG*EESLAL
Trigger: GAGGGCAAGGCTCTCCTCCCAGCCAGGGACGCCAGG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGAAGAATGCAAGGATaGTTTTGTCACAGTATCACT +
Preference number: 4 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSGRMQG*FCHSIT
Trigger: AGTGATACTGTGACAAAACCATCCTTGCATTCTTCC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATAGTGAATCACACGTTTaGAAACTCAAGCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHSESHV*KLKLPF
Trigger: AAAAGGCAGCTTGAGTTTCCAAACGTGTGATTCACT...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTGAGCCCCAGAAGGGGATCTGCTCACTGATCTaGCACATGGTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: ASQRTTKDTLCKSEPQKGICSLI*HMVRFW
Trigger: CCAGAACCTCACCATGTGTCAGATCAGTGAGCAGAT...CCCCTTCTGGGGCTCAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR TCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATATGCTTGTGCTGCTTaGGGCCGGAGGACGTGGCGA +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRYACAA*GRRTWR
Trigger: TCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGGTTCAGGGGGCTCTTaGGCAGCGATGTGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLGSGGS*AAMWEV
Trigger: TACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGTCTGGTGAGATTGGCTaGTCTGGGGAAGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLSGEIG*SGEDLP
Trigger: GGGAAGATCTTCCCCAGATCAGCCAATCTCACCAGA...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAATCTGGTGAGATTGGCTaGTCTGGGGAAGATCTTCCC +
Preference number: 4 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQSGEIG*SGEDLP
Trigger: GGGAAGATCTTCCCCAGATCAGCCAATCTCACCAGA...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGTTGGAAAAGTCGGAATaGACCATGGTGGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLLEKSE*TMVGGE
Trigger: CTCCCCACCCACCATGGTTCATTCCGACTTTTCCAA...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCACCTGTGGATTCCTCTaGAGGCCACGTGGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLTCGFL*RPRGGP
Trigger: AGGACCGCCACGTGGCCTTCAGAGGAATCCACAGGT...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCGCAGGAAGAGCGACGTaGCGACTGTGTCGTCCATCC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATAGRAT*RLCRPS
Trigger: GGATGGACGACACAGTCGTCACGTCGCTCTTCCTGC...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCGGAGATCTGCTTTGTaGTGCAGCCTTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLRRSAL*CSLPGA
Trigger: CGCCCCAGGAAGGCTGCATCACAAAGCAGATCTCCG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAGCGTGCATCCGCTTGTaGCGGCACAGGTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRACIRL*RHRLEN
Trigger: GTTCTCCAACCTGTGCCGGCACAAGCGGATGCACGC...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACGGCGGACTTGCCCTTaGCCTTGTCCTTGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRRRTCP*PCPCQG
Trigger: ACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCCAGCTTCTTCTCCTaGATCCCCATGAAGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATPSFFS*IPMKPG
Trigger: CCCCGGCTTCATGGGGATGCAGGAGAAGAAGCTGGG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTCTCCCACAGCGATTTCCGTATTAATTGGGAACTGCGCCTCTTTCGCGTCAGCTGGATGTTCCGGACGTaGCGCTGGAGGTTCGAAGAG +
Preference number: 4 (lower is better)
Translates to: FSHSDFRINWELRLFRVSWMFRT*RWRFEE
Trigger: CTCTTCGAACCTCCAGCGGCACGTCCGGAACATCCA...GCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCAGTGAGACTCTACGACTaGTTTAGGGACTTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: NPQEERRDDCVVHPESQAVRLYD*FRDFWD
Trigger: ATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCAC...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAAGGGACAGCATCATTaGATATGCCTTCGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWKGQHH*ICLRVW
Trigger: CCACACCCGAAGGCATATGCAATGATGCTGTCCCTT...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGAAGGGACAGCATCATTaGATATGCCTTCGGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRKGQHH*ICLRVW
Trigger: CCACACCCGAAGGCATATGCAATGATGCTGTCCCTT...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCGGGGATGGGCGACATaGCACTGTCCTCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFRGWAT*HCPRPR
Trigger: ACGAGGCCGAGGACAGTGCCATGTCGCCCATCCCCG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTTGGCGTCCTGGGTGTaGTTCAGGGGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLLASWV*FRGLLS
Trigger: GCTCAAGAGCCCCCTGAACCACACCCAGGACGCCAA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCATCTATGGCTGACATCTaGGGGTGGAAGAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPSMADI*GWKSSG
Trigger: CCCGCTGCTCTTCCACCCCCAGATGTCAGCCATAGA...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTAGGACCCCGGGGTGCTaGCTCACTGGTGCGTTCTCG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFRTPGC*LTGAFS
Trigger: CGAGAACGCACCAGTGAGCCAGCACCCCGGGGTCCT...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCCCTGGGAGGGGGTGTaGAGAGGAGTGTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLPWEGV*RGVSSE
Trigger: TTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: PLADSARQLRWLSLDGHLCFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGGCCACATCTCTGCATaGCGGATCCAAGCCACAGGC +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLGHISA*RIQATG
Trigger: GCCTGTGGCTTGGATCCGCCATGCAGAGATGTGGCC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTCTTCAGTGCAAGCCTaGACCACCCGGCACCCACAG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATSSVQA*TTRHPQ
Trigger: CTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTGGCAGACCTCACATATaGAAGGCTTCACCGTGCTGT +
Preference number: 4 (lower is better)
Translates to: HISAWRIQATGPRLPHIIGRPHI*KASPCC
Trigger: ACAGCACGGTGAAGCCTTTCATATGTGAGGTCTGCC...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR TCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGGGTGGCGGGAAGAATaGGTGCTGGGAATAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPGWREE*VLGIED
Trigger: GTCTTCTATTCCCAGCACTCATTCTTCCCGCCACCC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCACTTTGGCTCGGCCTTaGCCAGCAAGTTGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLTLARP*PASCGR
Trigger: TCGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGT...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTGTAGATGGGGTCCATaGAGAAGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLCRWGP*RRARAW
Trigger: CCAAGCCCTCGCCCTTCTTCATGGACCCCATCTACA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTGGCACGTCTTCAGTGCAAGGTAATACGGATCAGTaGCAGAAAAGAACAAAACAA +
Preference number: 4 (lower is better)
Translates to: SVGLSLLQEPPRGTSSVQGNTDQ*QKRTKQ
Trigger: TTGTTTTGTTCTTTTCTGTCACTGATCCGTATTACC...TTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TTCTCCCACAGCGATTTCCGTATTAATTGGGAACTGCGCCTCTTTCGCGTCAGCACCGTGCTGTGGATATaGTTGTGCTGCTTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: FSHSDFRINWELRLFRVSTVLWI*LCCLRP
Trigger: CGGCCTCAAGCAGCACAAGCATATCCACAGCACGGT...GCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGTGCTGGCTCACTGGTaGGTTCTCGTGCTCGTGCTT +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLVLAHW*VLVLVL
Trigger: AAGCACGAGCACGAGAACGCACCAGTGAGCCAGCAC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTGCCGTCCACGATCTaGATGTCCGCCCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRLPSTI*MSARFS
Trigger: AGAGAAACGGGCGGACATGCAGATCGTGGACGGCAG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATCCTCCACGTCCTCCTaGTTCTCACTGGCTAGGCCT +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRSSTSS*FSLARP
Trigger: AGGCCTAGCCAGTGAGAAGCAGGAGGACGTGGAGGA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCAAATGCTTCCTCAGCTaGTCTGCGGAGGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLKCFLS*SAEVQP
Trigger: GGGCTGGACCTCCGCAGAGCAGCTGAGGAAGCATTT...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR GCA 90 bp TGCCCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTGAGCCCAAGACCGTCCTTCTATaGGCCTCAAGCCCAATTTTC +
Preference number: 4 (lower is better)
Translates to: CPSASQRTTKDTLCKSEPKTVLL*ASSPIF
Trigger: GAAAATTGGGCTTGAGGCGCATAGAAGGACGGTCTT...GGGCTCAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR GCA 90 bp TGCCCCTGCCCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTACTAAGGACACACTCTaGAAATCTGAGCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CPCPSASQRTTKDTLCKSTKDTL*KSEPQK
Trigger: CTTCTGGGGCTCAGATTTGCAGAGTGTGTCCTTAGT...AGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGGGCAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR CCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCACCAGCAGGTCCCGGTTaGGCTCATACATATTATTTA +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRAPAGPG*AHTYYL
Trigger: TAAATAATATGTATGAGCCCAACCGGGACCTGCTGG...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCACATGGTGAGGTTCTaGTCATCGCAGGAGCACGCC +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLHMVRF*SSQEHA
Trigger: GGCGTGCTCCTGCGATGACCAGAACCTCACCATGTG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCACATGGTGAGGTTCTaGTCATCGCAGGAGCACGCC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATHMVRF*SSQEHA
Trigger: GGCGTGCTCCTGCGATGACCAGAACCTCACCATGTG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCGCCGCAGGTCCAGCTTaGACTGGAAGAGTTCGTCAC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATAAGPA*TGRVRH
Trigger: GTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGC...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAAAGGCCTTGGGACACTaGTCGCATTTGTACTCGCGC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPKALGH*SHLYSR
Trigger: GCGCGAGTACAAATGCGACCAGTGTCCCAAGGCCTT...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTTGCCTTGTCCATCATaGGGCTGGGGGTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATLPCPS*GWGSRA
Trigger: TGCCCTTGACCCCCAGCCCCATGATGGACAAGGCAA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCAAGTTGGGCAGGAACTaGAAGGGGAACGCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATKLGRN*KGNAEW
Trigger: CCACTCGGCGTTCCCCTTCCAGTTCCTGCCCAACTT...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCGCTGACATCTGGGGGTaGAAGAGCAGCGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: HRSVILRGFFISTLRDKVADIWG*KSSGDG
Trigger: GCCGTCCCCGCTGCTCTTCCACCCCCAGATGTCAGC...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCCGAGTCCGCCTTCATaGCTGCAAAGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLPSPPS*LQSSPA
Trigger: AGCTGGAGAGCTTTGCAGCCATGAAGGCGGACTCGG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATTCCGGACGTGCCGCTaGAGGTTCGAAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRFRTCR*RFEEML
Trigger: CAGCATCTCTTCGAACCTCCAGCGGCACGTCCGGAA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTTCCGGACGTGCCGCTaGAGGTTCGAAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLFRTCR*RFEEML
Trigger: CAGCATCTCTTCGAACCTCCAGCGGCACGTCCGGAA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCGGCTTCTCCTTGTTGTaGATGTTCCGGACGTGCCGC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATGFSLL*MFRTCR
Trigger: GCGGCACGTCCGGAACATCCACAACAAGGAGAAGCC...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTGCTAGGCCTGGACACTaGGCACTGCCGTCCACGATC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFARPGH*ALPSTI
Trigger: GATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGC...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACGGAATGAACCATGGTaGGTGGGGAGGATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRRNEPW*VGRMLR
Trigger: CCTCAGCATCCTCCCCACCCACCATGGTTCATTCCG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCACACCCAGCATCACCTTaGCTTATACAAATAGGGACA +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRAHPASP*LIQIGT
Trigger: TGTCCCTATTTGTATAAGCCAAGGTGATGCTGGGTG...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp TTAACCTCCAAATCGGCTTCTCCTAGGCTTTCTCTTAAGGAAATGTCTCTACACCCCGGAGCGATCCGCTaGGATTGCTCCCCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: LTSKSASPRLSLKEMSLHPGAIR*DCSPGQ
Trigger: CTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGG...GTGTAGAGACATTTCCTTAAGAGAAAGCCTAGGAGAAGCCGATTTGGAGGTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp ACAAACACAAAAATGGAATGGAAGGAGCAGAGGAACTCTTCTAGGAAGAATGCAGGGACGTCGGCTCGCTaGGGGCTGGGGTCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: TNTKMEWKEQRNSSRKNAGTSAR*GLGSEE
Trigger: CTCCTCAGACCCCAGCCCCCAGCGAGCCGACGTCCC...TGCATTCTTCCTAGAAGAGTTCCTCTGCTCCTTCCATTCCATTTTTGTGTTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTGAGCGCAGCCCCCACTaGGCCACACGTGTACTTCTT +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFERSPH*ATRVLL
Trigger: AAGAAGTACACGTGTGGCTCAGTGGGGGCTGCGCTC...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCAGGGAAAGTACTCGTTaGAGCCCAGGCTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATRESTR*SPGWRD
Trigger: ATCACGCCAGCCTGGGCTTCAACGAGTACTTTCCCT...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCATGGTCTCTATGGCTaGCATCTGGGGGTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATHGLYG*HLGVEE
Trigger: CTCTTCCACCCCCAGATGTCAGCCATAGAGACCATG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTCCTCAGGTGTCTGGTaGGATTGGCTGATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATSSGVW*DWLIWG
Trigger: TCCCCAGATCAGCCAATCTCACCAGACACCTGAGGA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGGGGACTTTTGGGATCTaGGTTTCCATTGGAAAAGTC +
Preference number: 4 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWGTFGI*VSIGKV
Trigger: GACTTTTCCAATGGAAACTCAGATCCCAAAAGTCCC...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCGGAGATCTGCTTTGTaGTGCAGCCTTCCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFRRSAL*CSLPGA
Trigger: CGCCCCAGGAAGGCTGCATCACAAAGCAGATCTCCG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTGGATATGCTTGTGCTaGTTGAGGCCGGAGGACGTG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLWICLC*LRPEDV
Trigger: CACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAACCGTGCTGTGGATATaGTTGTGCTGCTTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRTVLWI*LCCLRP
Trigger: CGGCCTCAAGCAGCACAAGCATATCCACAGCACGGT...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTGCGTGCATCCGCTTGTaGCGGCACAGGTTGGAGAAC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFACIRL*RHRLEN
Trigger: GTTCTCCAACCTGTGCCGGCACAAGCGGATGCACGC...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCGTCCGACATGTCGCTaGTCCTGGTCTTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATRPTCR*SWSSAS
Trigger: AGAAGCTGAAGACCAGGAGCAGCGACATGTCGGACG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCATCTTCCCACAGTACCTaGACGTGTATCGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPSSHST*TCIAPC
Trigger: GCAAGGAGCGATACACGTGCAGGTACTGTGGGAAGA...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAGTTGATGGGGTGAAATaGTCCAGACTCCGACGTGGC +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRVDGVK*SRLRRG
Trigger: GCCACGTCGGAGTCTGGAGCATTTCACCCCATCAAC...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCGTTGATGGGGTGAAATaGTCCAGACTCCGACGTGGC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATVDGVK*SRLRRG
Trigger: GCCACGTCGGAGTCTGGAGCATTTCACCCCATCAAC...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTGTCTTGCCTCGTTGTaGAGATCTGGCGTGGGAGGA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLCLASL*RSGVGG
Trigger: TCCTCCCACGCCAGATCTGCACAACGAGGCAAGACA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TTCTCCCACAGCGATTTCCGTATTAATTGGGAACTGCGCCTCTTTCGCGTCAGCGGCTTCACCGTGCTGTaGATATGCTTGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: FSHSDFRINWELRLFRVSGFTVL*ICLCCL
Trigger: CAAGCAGCACAAGCATATCCACAGCACGGTGAAGCC...GCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGGCTTCACCGTGCTGTaGATATGCTTGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPGFTVL*ICLCCL
Trigger: CAAGCAGCACAAGCATATCCACAGCACGGTGAAGCC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTTGGCGTCCTGGGTGTaGTTCAGGGGGCTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFLASWV*FRGLLS
Trigger: GCTCAAGAGCCCCCTGAACCACACCCAGGACGCCAA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ACAAACACAAAAATGGAATGGAAGGAGCAGAGGAACTCTTCTAGGAAGAATGCAAGCCGCCCCCAAACTTaGGCTGGCCCTCGGCGGACT +
Preference number: 4 (lower is better)
Translates to: TNTKMEWKEQRNSSRKNASRPQT*AGPRRT
Trigger: AGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCT...TGCATTCTTCCTAGAAGAGTTCCTCTGCTCCTTCCATTCCATTTTTGTGTTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTTGACCAGCAAGTTGTaGGCGAGGGCTCGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFLTSKL*ARARSV
Trigger: CACGGACCGAGCCCTCGCCCACAACTTGCTGGTCAA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCAGTCGGAATGAACCATaGTGGGTGGGGAGGATGCTG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATSRNEP*WVGRML
Trigger: CAGCATCCTCCCCACCCACCATGGTTCATTCCGACT...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 4 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACCACCCAGCATCACCTTaGCTTATACAAATAGGGACA +
Preference number: 4 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDHPASP*LIQIGT
Trigger: TGTCCCTATTTGTATAAGCCAAGGTGATGCTGGGTG...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCAGCGCACGCACAGGTaGGTCCTGTCTTGCCTCGTT +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFQRTHR*VLSCLV
Trigger: AACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAATCTGCTCACTGATCTaGCACATGGTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPICSLI*HMVRFW
Trigger: CCAGAACCTCACCATGTGTCAGATCAGTGAGCAGAT...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGTCCACACGTGACACAAACCCACACCAAGGCGGCTTGCACCACTCCTGTTTGTTTCTCTGTTCGCGTTaGTGCTTGGTTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: MSTRDTNPHQGGLHHSCLFLCSR*CLVHLT
Trigger: AGTGAGATGAACCAAGCATCAACGCGAACAGAGAAA...CAAACAGGAGTGGTGCAAGCCGCCTTGGTGTGGGTTTGTGTCACGTGTGGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGAATCCTTGGAGATGGTaGGACTCTACGACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLNPWRW*DSTTAL
Trigger: TAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATT...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGTGATCTCTCTCTTTTaGGCACACCAGTCTATCCAT +
Preference number: 4 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLVISLF*AHQSIH
Trigger: ATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCAC...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TCTGGGCCCTTCATTACTATAGTTTGCATCTCACAAAAGCACAGCCCTGGCCCACGCAGAACTTCTCACTaGCCAGGTCTTCGGAGATCT +
Preference number: 4 (lower is better)
Translates to: SGPFITIVCISQKHSPGPRRTSH*PGLRRS
Trigger: AGATCTCCGAAGACCTGGGCAGTGAGAAGTTCTGCG...TGGGCCAGGGCTGTGCTTTTGTGAGATGCAAACTATAGTAATGAAGGGCCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR GCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCATGGATGACCATGTGCTaGTCCAGGCTGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPWMTMC*SRLYLL
Trigger: CAACAAGTACAGCCTGGAGCAGCACATGGTCATCCA...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGTGTGGATGACCATGTaGTGCTCCAGGCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLVWMTM*CSRLYL
Trigger: CAAGTACAGCCTGGAGCAGCACATGGTCATCCACAC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTCGCAGAAGCGCCGGTaGTTGTTGAGGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFSQKRR*LLREEV
Trigger: TACCTCCTCCCTCAACAAGCACCGGCGCTTCTGCGA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCTTCTCGGCAATGGATaGGATGGCCTTGATGGAGTC +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATLLGNG*DGLDGV
Trigger: GACTCCATCAAGGCCATCGCATCCATTGCCGAGAAG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTAACCTCCAAATCGGCTTCTCCTAGGCTTTCTCTTAAGGAAATGTCTCTACACGACACGGTGTCATCCTaGGACTTCCCGGCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LTSKSASPRLSLKEMSLHDTVSS*DFPARL
Trigger: CAGCCTGGCCGGGAAGTCGCAGGATGACACCGTGTC...GTGTAGAGACATTTCCTTAAGAGAAAGCCTAGGAGAAGCCGATTTGGAGGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTAAATGCTTCCTCAGCTaGTCTGCGGAGGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFKCFLS*SAEVQP
Trigger: GGGCTGGACCTCCGCAGAGCAGCTGAGGAAGCATTT...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCCGAGTCCGCCTTCATaGCTGCAAAGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFPSPPS*LQSSPA
Trigger: AGCTGGAGAGCTTTGCAGCCATGAAGGCGGACTCGG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TCCTCTGAAGGCCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCACTTATCACACGGTTTTaGTCCTTCACCAGATACTTA +
Preference number: 4 (lower is better)
Translates to: SSEGHVAVLTPIPCHTRALITRF*SFTRYL
Trigger: TAAGTATCTGGTGAAGGACCAAAACCGTGTGATAAG...TGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGGCCTTCAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTGTGCAGATCTGGCGTaGGAGGAATCCCTTTCACTG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLCADLA*EESLSL
Trigger: CAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCTCGTTGTGCAGATCTaGCGTGGGAGGAATCCCTTT +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATLVVQI*RGRNPF
Trigger: AAAGGGATTCCTCCCACGCCAGATCTGCACAACGAG...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTGGGCACCAACACTGCTaGGCAGAGCAAAACTGGGAG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFGHQHC*AEQNWE
Trigger: CTCCCAGTTTTGCTCTGCCCAGCAGTGTTGGTGCCC...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTAGGGAAAGTACTCGTTaGAGCCCAGGCTGGCGTGAT +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFRESTR*SPGWRD
Trigger: ATCACGCCAGCCTGGGCTTCAACGAGTACTTTCCCT...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTCCTCAGGTGTCTGGTaGGATTGGCTGATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFSSGVW*DWLIWG
Trigger: TCCCCAGATCAGCCAATCTCACCAGACACCTGAGGA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTGCACAGGTGGCACTTaGAAGGCTTCTCCTTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATCTGGT*KASPCC
Trigger: ACAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTGGATGACCATGTGCTaGTCCAGGCTGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATWMTMC*SRLYLL
Trigger: CAACAAGTACAGCCTGGAGCAGCACATGGTCATCCA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTGGATGACCATGTGCTaGTCCAGGCTGTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLWMTMC*SRLYLL
Trigger: CAACAAGTACAGCCTGGAGCAGCACATGGTCATCCA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCCCGGCGGCGCCCGTTaGAGTCAGCAGCTGCTCGTC +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYPGGAR*SQQLLV
Trigger: GACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCTCAGGTCCAGCGGCTaGTCCTCGCCGGATGCGGGG +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYLRSSG*SSPDAG
Trigger: CCCCGCATCCGGCGAGGAGCAGCCGCTGGACCTGAG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTGTCCGCCTTCATGGCTaGAAAGCTCTCCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFVRLHG*KALQLL
Trigger: GAGAAGCTGGAGAGCTTTGCAGCCATGAAGGCGGAC...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGTGCTTAAATAGACTCTaGAGTCAATACGGTTACCAA +
Preference number: 4 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGCLNRL*SQYGYQ
Trigger: TTGGTAACCGTATTGACTGCAGAGTCTATTTAAGCA...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTCGCATCCCTGTCCATaGTGCACAGTTACATGGCCC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFSHPCP*CTVTWP
Trigger: GGGCCATGTAACTGTGCAGCATGGACAGGGATGCGA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTCTGGATGGGACAGCTaGACGCGTGGCCTTGTAAAG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFSGWDS*TRGLVK
Trigger: CTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCACGTGTACTTCTTATaGCGCCGCAGGTCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFHVYFL*RRRSSL
Trigger: CAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCGGACGGCCACCTGCATaGCCGTCACTGAACAGTGTT +
Preference number: 4 (lower is better)
Translates to: HRSVILRGFFISTLRDKVGRPPA*PSLNSV
Trigger: AACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
3UTR CAA 72 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTACGACTGCTTTAGGGAC +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQS*EMVRLYDCFRD
Trigger: GTCCCTAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCATTTCTCTGTTCGCGTTaGTGCTTGGTTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPFLCSR*CLVHLT
Trigger: AGTGAGATGAACCAAGCATCAACGCGAACAGAGAAA...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACGGGTGGGGAGGATGCTaGGGAGTGGCCACACGCAGG +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYGWGGC*GVATRR
Trigger: CCTGCGTGTGGCCACTCCTCAGCATCCTCCCCACCC...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTCTCCCACAGCGATTTCCGTATTAATTGGGAACTGCGCCTCTTTCGCGTCAGCAATCCTTGGAGATGGTaGGACTCTACGACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: FSHSDFRINWELRLFRVSNPWRW*DSTTAL
Trigger: TAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATT...GCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp TTTCATGATTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCGATTTCACCTGCCCACTGGCTaGTTCTGCGAGGCAGCTCCG +
Preference number: 4 (lower is better)
Translates to: FHDFLHFTSYFILLPQRFHLPTG*FCEAAP
Trigger: CGGAGCTGCCTCGCAGAATCAGCCAGTGGGCAGGTG...AAATCGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTCACAATCCAGTGCTTTaGGGCTTCGAGTCTAAAATA +
Preference number: 4 (lower is better)
Translates to: HISAWRIQATGPRLPHIIHNPVL*GFESKI
Trigger: TATTTTAGACTCGAAGCCTCAAAGCACTGGATTGTG...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TTTCATGATTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCGATTTGGCCCGGGGCAAAGATaGCGCCCGGCGTGTAATGGT +
Preference number: 4 (lower is better)
Translates to: FHDFLHFTSYFILLPQRFGPGQR*RPACNG
Trigger: ACCATTACACGCCGGGCGGCATCTTTGCCCCGGGCC...AAATCGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTCTTCCCACAGTACCTaGACGTGTATCGCTCCTTGC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFSSHST*TCIAPC
Trigger: GCAAGGAGCGATACACGTGCAGGTACTGTGGGAAGA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCCAGCATCATTGCATATaGCTGGTTCTTAGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLQHHCI*LVLSLP
Trigger: AGGCAGGCTAAGAACCAGGCATATGCAATGATGCTG...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000509860.1
CDS-3UTR CCA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACCAGCAGGTCCCGGTTaGGCTCATACATATTATTTA +
Preference number: 4 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPPAGPG*AHTYYL
Trigger: TAAATAATATGTATGAGCCCAACCGGGACCTGCTGG...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACAGCCCTCCTTGGGGGTaGAGTCCTCGCTGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYSPPWG*SPRWWG
Trigger: TCCCCACCAGCGAGGACTTCACCCCCAAGGAGGGCT...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTATCTGCTCACTGATCTaGCACATGGTGAGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFICSLI*HMVRFW
Trigger: CCAGAACCTCACCATGTGTCAGATCAGTGAGCAGAT...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACGAGCGGATGTGCCGCTaGAGGTTGCTGGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYERMCR*RLLGSV
Trigger: CACGGACCCCAGCAACCTTCAGCGGCACATCCGCTC...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATTTCTCTGTTCGCGTTaGTGCTTGGTTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRFLCSR*CLVHLT
Trigger: AGTGAGATGAACCAAGCATCAACGCGAACAGAGAAA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTTTCTCTGTTCGCGTTaGTGCTTGGTTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLFLCSR*CLVHLT
Trigger: AGTGAGATGAACCAAGCATCAACGCGAACAGAGAAA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCTTGGGGGATGGGGGTTaGCAATCCAAGGAGTTAGCA +
Preference number: 4 (lower is better)
Translates to: HRSVILRGFFISTLRDKVLGDGG*QSKELA
Trigger: TGCTAACTCCTTGGATTGTCAACCCCCATCCCCCAA...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAGTGAGACTCTACGACTaGTTTAGGGACTTTTGGGAT +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRVRLYD*FRDFWD
Trigger: ATCCCAAAAGTCCCTAAAGCAGTCGTAGAGTCTCAC...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTAACCTCCAAATCGGCTTCTCCTAGGCTTTCTCTTAAGGAAATGTCTCTACACTGTGCCGGCACAGGTTaGAGAACTGCGTGTAGGACT +
Preference number: 4 (lower is better)
Translates to: LTSKSASPRLSLKEMSLHCAGTG*RTACRT
Trigger: AGTCCTACACGCAGTTCTCCAACCTGTGCCGGCACA...GTGTAGAGACATTTCCTTAAGAGAAAGCCTAGGAGAAGCCGATTTGGAGGTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACTGTCCATCATGGGGCTaGGGGTCAAGGGCAGGCCCG +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYCPSWG*GSRAGP
Trigger: CGGGCCTGCCCTTGACCCCCAGCCCCATGATGGACA...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCGGTCCAGGTTGGTCTaGTGCCCGAAGCAGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYRSRLV*CPKQRL
Trigger: CAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTGTATTAATTGGGAACTaGGCCTCTTTCGCGTCAGCA +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFVLIGN*ASFASA
Trigger: TGCTGACGCGAAAGAGGCGCAGTTCCCAATTAATAC...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR GCA 90 bp CGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTGAGCCCCAGATTCATTACTATAGTTTaGATCTCACAAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: RQLPNGRLRTHSANLSPRFITIV*ISQKHS
Trigger: GCTGTGCTTTTGTGAGATGCAAACTATAGTAATGAA...TCTGGGGCTCAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTATCATTGCATATGCCTaGTTCTTAGCCTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFIIAYA*FLACLH
Trigger: GTGCAGGCAGGCTAAGAACCAGGCATATGCAATGAT...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000509860.1
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACGCGTCCAGAGAACCCTaGGAGGGGGTGTGGAGAGGA +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYASREP*EGVWRG
Trigger: TCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGC...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRCFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATCFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp TTTCATGATTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCGATTTACTTTGGCTCGGCCTTaGCCAGCAAGTTGTGGGCGA +
Preference number: 4 (lower is better)
Translates to: FHDFLHFTSYFILLPQRFTLARP*PASCGR
Trigger: TCGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGT...AAATCGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCACTCGGGTTTGCAAATaGGCTCAAATTTCAAAGCAA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLTRVCK*AQISKQ
Trigger: TTGCTTTGAAATTTGAGCTCATTTGCAAACCCGAGT...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR GCA 90 bp TTTCATGATTTCCTACACTTCACGTCTTATTTCATTCTTCTCCCACAGCGATTTCTTTGGACGGCCACCTaGATGGCCGTCACTGAACAG +
Preference number: 4 (lower is better)
Translates to: FHDFLHFTSYFILLPQRFLWTAT*MAVTEQ
Trigger: CTGTTCAGTGACGGCCATGCAGGTGGCCGTCCAAAG...AAATCGCTGTGGGAGAAGAATGAAATAAGACGTGAAGTGTAGGAAATCATGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCCAGCAGGTCCCGGTTaGGCTCATACATATTATTTA +
Preference number: 4 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFPAGPG*AHTYYL
Trigger: TAAATAATATGTATGAGCCCAACCGGGACCTGCTGG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCCTCCTGCTTCTCACTaGCTAGGCCTGGACACTGGG +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYPPASH*LGLDTG
Trigger: CCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGATCTGAGTTTCCATTaGAAAAGTCGGAATGAACCA +
Preference number: 4 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLDLSFH*KSRNEP
Trigger: TGGTTCATTCCGACTTTTCCAATGGAAACTCAGATC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCATGGTTCACGGGTGTaGCCCCGCGCCTCTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYHGSRV*PRASCS
Trigger: AGAACAAGAGGCGCGGGGCCACACCCGTGAACCATG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CCA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCTTTCCATTTGGGGGATaGGGGTTGACAATCCAAGGA +
Preference number: 4 (lower is better)
Translates to: HRSVILRGFFISTLRDKVFPFGG*GLTIQG
Trigger: TCCTTGGATTGTCAACCCCCATCCCCCAAATGGAAA...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACTCCCCGTGGTGGTGTTaGCGTCCTCAAAGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYSPWWC*RPQSHC
Trigger: GCAGTGACTTTGAGGACGTCAACACCACCACGGGGA...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACTGTAGATGGGGTCCATaGAGAAGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYCRWGP*RRARAW
Trigger: CCAAGCCCTCGCCCTTCTTCATGGACCCCATCTACA...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACTCGCAGAAGCGCCGGTaGTTGTTGAGGGAGGAGGTA +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYSQKRR*LLREEV
Trigger: TACCTCCTCCCTCAACAAGCACCGGCGCTTCTGCGA...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCTGCCGTCCACGATCTaGATGTCCGCCCGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYLPSTI*MSARFS
Trigger: AGAGAAACGGGCGGACATGCAGATCGTGGACGGCAG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTGCTTAAATAGACTCTaGAGTCAATACGGTTACCAA +
Preference number: 4 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATCLNRL*SQYGYQ
Trigger: TTGGTAACCGTATTGACTGCAGAGTCTATTTAAGCA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR GCA 90 bp ACAAACACAAAAATGGAATGGAAGGAGCAGAGGAACTCTTCTAGGAAGAATGCATTCAGGCAAGTGTTTTaGAGACGCTCATGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: TNTKMEWKEQRNSSRKNAFRQVF*RRSWGS
Trigger: GCTTCCCCATGAGCGTCTGCAAAACACTTGCCTGAA...TGCATTCTTCCTAGAAGAGTTCCTCTGCTCCTTCCATTCCATTTTTGTGTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACTTGCCTTGTCCATCATaGGGCTGGGGGTCAAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYLPCPS*GWGSRA
Trigger: TGCCCTTGACCCCCAGCCCCATGATGGACAAGGCAA...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCATGCTCAGGAGAAACTaGGCTTGCCATCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: HRSVILRGFFISTLRDKVMLRRN*ACHHFQ
Trigger: CTGAAAATGATGGCAAGCCCAGTTTCTCCTGAGCAT...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACAACAATGGCAGAAGGTaGCGGGCGGCACAGGTCTGT +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYNNGRR*RAAQVC
Trigger: ACAGACCTGTGCCGCCCGCCACCTTCTGCCATTGTT...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR TCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACGGTTGCTGGGGTCCGTaGACACCTTCACGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYGCWGP*TPSRSF
Trigger: AAAACTGCGTGAAGGTGTTCACGGACCCCAGCAACC...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCTGTCATGGTCTCTATaGCTGACATCTGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYLSWSL*LTSGGG
Trigger: TCCACCCCCAGATGTCAGCCATAGAGACCATGACAG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCAGCAGCTCCTCACCTaGCTCAATGTCCTTAATGAC +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYQQLLT*LNVLND
Trigger: GTCATTAAGGACATTGAGCCAGGTGAGGAGCTGCTG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACTTTCTCTGTTCGCGTTaGTGCTTGGTTCATCTCACT +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYFLCSR*CLVHLT
Trigger: AGTGAGATGAACCAAGCATCAACGCGAACAGAGAAA...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR TCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACAATCCTTGGAGATGGTaGGACTCTACGACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYNPWRW*DSTTAL
Trigger: TAAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATT...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CCA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACTGCTTTAGGGACTTTTaGGATCTGAGTTTCCATTGG +
Preference number: 4 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYCFRDF*DLSFHW
Trigger: CCAATGGAAACTCAGATCCCAAAAGTCCCTAAAGCA...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS GCA 90 bp TGCGGGGCTCCCGCCCGCCGCCGTTTTGGCTGGCACGGGCCCGGCTaGCGATGCTCAGGTCCAGCGGCTGCTCCTCGCCGGATGCGGGGG +
Preference number: 5 (lower is better)
Translates to: CGAPARRRFGWHGPG*RCSGPAAAPRRMRG
Trigger: CCCCCGCATCCGGCGAGGAGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCGGGCGGGAGCCCCGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTGTCGGGGCCGTGTTTaGGGGCGCACCAGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPCRGRV*GRTSPG
Trigger: TCCTGGGCTGGTGCGCCCCAAAACACGGCCCCGACA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTGGCCCTCGGCGGACTaGCCCTTGCCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPWPSAD*PLPLSL
Trigger: CAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCAAGCCGCCCCCAAACTaGGGCTGGCCCTCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVKPPPN*GWPSAD
Trigger: GTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTT...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCGAAGTCTGTCTCCTTaGCCGCCGCCCGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: GVATRRDRVLRGPARLRPRSLSP*PPPGAP
Trigger: TGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTCG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTCTTGCACTCGTGGGCTaGGCCGCTGCCACCGCCAAG +
Preference number: 5 (lower is better)
Translates to: GVATRRDRVLRGPARLRPLALVG*AAATAK
Trigger: CTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAG...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGGGCTGGGGGAGGGTTTaGCCTTGTCCATCATGGGGC +
Preference number: 5 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPGWGRV*PCPSWG
Trigger: GCCCCATGATGGACAAGGCAAAACCCTCCCCCAGCC...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTAGCGATCCGCTGGGATaGCTCCCCAGGGCAGCCACG +
Preference number: 5 (lower is better)
Translates to: GVATRRDRVLRGPARLRPSDPLG*LPRAAT
Trigger: CGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCT...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCAAGGCCCTCGGGCTaGAGCTCCTCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEPRPSG*SSSARP
Trigger: GGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTGG...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCAGGGGACTGGGGAGCTaGGCGTCCTGGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVRGLGS*ASWVWF
Trigger: GAACCACACCCAGGACGCCAAGCTCCCCAGTCCCCT...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCAAGCCGCCCCCAAACTaGGGCTGGCCCTCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSKPPPN*GWPSAD
Trigger: GTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTT...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCCCCGGCGGCGCCCGTaGCAGTCAGCAGCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: FPSATPRGHPAVATSFCLPRRRP*QSAAAR
Trigger: ACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGGG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCATGGATGCGATGGCCTaGATGGAGTCCCCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVMDAMA*MESPAA
Trigger: CGCCGCCGGGGACTCCATCAAGGCCATCGCATCCAT...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCGCCTTGACCAGCAAGTaGTGGGCGAGGGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVALTSK*WARARS
Trigger: GGACCGAGCCCTCGCCCACAACTTGCTGGTCAAGGC...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS CCA 90 bp CGGCTCTCGAACTTCTCCTCGGGCCCCGCAGCTGCCGTCGTGCCCTaGCTGCTGTTGCTGACGGCGGAGACCAGGGGCAGGGCTGGGTTC +
Preference number: 5 (lower is better)
Translates to: RLSNFSSGPAAAVVP*LLLLTAETRGRAGF
Trigger: GAACCCAGCCCTGCCCCTGGTCTCCGCCGTCAGCAACAGCAGCCAGGGCACGACGGCAGCTGCGGGGCCCGAGGAGAAGTTCGAGAGCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 90 bp CATAGACGTGGTTCTTGCGGGGCTCCCGCCCGCCGCCGTTTTGGCTaGCACGGGCCCGGCTGCCGATGCTCAGGTCCAGCGGCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: HRRGSCGAPARRRFG*HGPGCRCSGPAAAP
Trigger: AGGAGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCGGGCGGGAGCCCCGCAAGAACCACGTCTATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCCGAAGTCTGTCTCCTTaGCCGCCGCCCGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSRSLSP*PPPGAP
Trigger: TGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTCG...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCAAGGCCCTCGGGCTaGAGCTCCTCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: RGHPAVATSFCLSRASTCPRPSG*SSSARP
Trigger: GGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTGG...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCCCAAGGCCCTCGGGCTaGAGCTCCTCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FPSATPRGHPAVATSFCLPRPSG*SSSARP
Trigger: GGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTGG...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTGCCCTGGCTGCTGTaGCTGACGGCGGAGACCAGG +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSVPWLL*LTAETR
Trigger: CCTGGTCTCCGCCGTCAGCAACAGCAGCCAGGGCAC...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAAAGCCGCCCCCAAACTaGGGCTGGCCCTCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAKPPPN*GWPSAD
Trigger: GTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTT...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTGCCACACGGATGTACTaGAGCCAGCTGCCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRATRMY*SQLPAP
Trigger: GGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGGC...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTGGACACTGGTCGCATTaGTACTCGCGCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: GVATRRDRVLRGPARLRPGHWSH*YSRSSV
Trigger: CACGGAGGAGCGCGAGTACAAATGCGACCAGTGTCC...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCTATATGCTTGTGCTGCTaGAGGCCGGAGGACGTGGCG +
Preference number: 5 (lower is better)
Translates to: GVATRRDRVLRGPARLRPICLCC*RPEDVA
Trigger: CGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATAT...AGGACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCAGGGGACTGGGGAGCTaGGCGTCCTGGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSRGLGS*ASWVWF
Trigger: GAACCACACCCAGGACGCCAAGCTCCCCAGTCCCCT...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGTGCCCTGGCTGCTGTaGCTGACGGCGGAGACCAGG +
Preference number: 5 (lower is better)
Translates to: RGHPAVATSFCLSRASTCVPWLL*LTAETR
Trigger: CCTGGTCTCCGCCGTCAGCAACAGCAGCCAGGGCAC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGGTGCCCTGGCTGCTGTaGCTGACGGCGGAGACCAGG +
Preference number: 5 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQVPWLL*LTAETR
Trigger: CCTGGTCTCCGCCGTCAGCAACAGCAGCCAGGGCAC...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGCCTTGACCAGCAAGTaGTGGGCGAGGGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSALTSK*WARARS
Trigger: GGACCGAGCCCTCGCCCACAACTTGCTGGTCAAGGC...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGCCTTGACCAGCAAGTaGTGGGCGAGGGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEALTSK*WARARS
Trigger: GGACCGAGCCCTCGCCCACAACTTGCTGGTCAAGGC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCCACGTGTATCGCTCCTaGCCCTTCCTGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVHVYRS*PFLRMG
Trigger: CCCCATCCTCAGGAAGGGCAAGGAGCGATACACGTG...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTTGCTGTCTCTGCTCCTaGCGGCAGGTTCCCCCGACG +
Preference number: 5 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGCCLCS*RQVPPT
Trigger: CGTCGGGGGAACCTGCCGCAAGGAGCAGAGACAGCA...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS GCA 90 bp GGGGCGCCAAGCCGCCCCCAAACTTGGGCTGGCCCTCGGCGGACTTaGCCTTGCCCTTGTCCTTGTCAGGGTCGCTGTCCACGTCGCTGT +
Preference number: 5 (lower is better)
Translates to: GAPSRPQTWAGPRRT*PCPCPCQGRCPRRC
Trigger: ACAGCGACGTGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTTGGCGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTGCTTCCATCTTCCTCTaGGCCCAGACCCCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRASIFL*AQTPRP
Trigger: TGGCCTGGGGGTCTGGGCCAAGAGGAAGATGGAAGC...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCCACACGGATGTACTaGAGCCAGCTGCCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAATRMY*SQLPAP
Trigger: GGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGGC...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCCTTGCACTCGTGGGCTaGGCCGCTGCCACCGCCAAG +
Preference number: 5 (lower is better)
Translates to: YPFPSATPRGHPAVATSFLALVG*AAATAK
Trigger: CTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAG...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCATCCGCTCGCAGTCCTaGCACTCGTGGGCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: FPSATPRGHPAVATSFCLIRSQS*HSWAWP
Trigger: CGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGAT...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCATCCGCTCGCAGTCCTaGCACTCGTGGGCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: RGHPAVATSFCLSRASTCIRSQS*HSWAWP
Trigger: CGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGAT...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCTGCTCCAGGCTGTACTaGTTGGGGAACATCCGCTCG +
Preference number: 5 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVCSRLY*LGNIRS
Trigger: CGAGCGGATGTTCCCCAACAAGTACAGCCTGGAGCA...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGGAGTGGCCACACGCAGGGACAGGGTTCTCCGGGGCCCCGCCCGCCTCCGTCATCTGGCCACAGTCCTaGCACTTGATCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: EEWPHAGTGFSGAPPASVIWPQS*HLICVR
Trigger: CCGCACGCAGATCAAGTGCAAGGACTGTGGCCAGAT...GACGGAGGCGGGCGGGGCCCCGGAGAACCCTGTCCCTGCGTGTGGCCACTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGGCTGGGGGAGGGTTTaGCCTTGTCCATCATGGGGC +
Preference number: 5 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEGWGRV*PCPSWG
Trigger: GCCCCATGATGGACAAGGCAAAACCCTCCCCCAGCC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCAGGGGACTGGGGAGCTaGGCGTCCTGGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVRGLGS*ASWVWF
Trigger: GAACCACACCCAGGACGCCAAGCTCCCCAGTCCCCT...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCTCGGCGGACTTGCCCTaGCCCTTGTCCTTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSSADLP*PLSLSG
Trigger: CCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGA...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCTGGCCCTCGGCGGACTaGCCCTTGCCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FPSATPRGHPAVATSFCLWPSAD*PLPLSL
Trigger: CAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCA...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAATGGATGCGATGGCCTaGATGGAGTCCCCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAMDAMA*MESPAA
Trigger: CGCCGCCGGGGACTCCATCAAGGCCATCGCATCCAT...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTTCACGTCTTTGGGCTaGGTGGTGAGATCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPFTSLG*VVRSKG
Trigger: CCCCTTTGATCTCACCACCAAGCCCAAAGACGTGAA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGATGGGCTTCACGTCTTaGGGCTTGGTGGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPMGFTS*GLVVRS
Trigger: TGATCTCACCACCAAGCCCAAAGACGTGAAGCCCAT...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGAGGTGTCTGGTGAGATaGGCTGATCTGGGGAAGATC +
Preference number: 5 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPRCLVR*ADLGKI
Trigger: GATCTTCCCCAGATCAGCCAATCTCACCAGACACCT...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGGCCCCGCCCGCCTCCGTCCTTCGTGGCTGGTGCCCTCGCTCTGGCCACCGTCTAAAAGTGCGTGGTaGTCCGACTCTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RGPARLRPSWLVPSLWPPSKSAW*SDSEVG
Trigger: TCCCACCTCAGAGTCGGACAACCACGCACTTTTAGA...CGGTGGCCAGAGCGAGGGCACCAGCCACGAAGGACGGAGGCGGGCGGGGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGTGCGAGGCAGCTCCGTaGGCTGTCTTTGGACGGCCA +
Preference number: 5 (lower is better)
Translates to: PRPHAGTRQWPPASVSAECEAAP*AVFGRP
Trigger: TGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCA...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGTGGCCCCGCGCCTCTaGTTCTGCCTCGGGGCACCC +
Preference number: 5 (lower is better)
Translates to: AHWLILRGSSVGCLWTATVAPRL*FCLGAP
Trigger: GGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCAC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGTCGGCGTGCATCCGCTaGTGCCGGCACAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPSACIR*CRHRLE
Trigger: CTCCAACCTGTGCCGGCACAAGCGGATGCACGCCGA...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTCCACAGTCCTTGCACTaGATCTGCGTGCGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGPQSLH*ICVRQS
Trigger: CGACTGCCGCACGCAGATCAAGTGCAAGGACTGTGG...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGAGGGGACTGGGGAGCTaGGCGTCCTGGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWRGLGS*ASWVWF
Trigger: GAACCACACCCAGGACGCCAAGCTCCCCAGTCCCCT...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGTGCCCTGGCTGCTGTaGCTGACGGCGGAGACCAGG +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSVPWLL*LTAETR
Trigger: CCTGGTCTCCGCCGTCAGCAACAGCAGCCAGGGCAC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCTCGGCGGACTTGCCCTaGCCCTTGTCCTTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: FPSATPRGHPAVATSFCLSADLP*PLSLSG
Trigger: CCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGA...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGTGGCCCTCGGCGGACTaGCCCTTGCCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWWPSAD*PLPLSL
Trigger: CAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCA...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCAAGCCGCCCCCAAACTaGGGCTGGCCCTCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: AHWLILRGSSVGCLWTATKPPPN*GWPSAD
Trigger: GTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTT...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGCCCCGGCGGCGCCCGTaGCAGTCAGCAGCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPPRRRP*QSAAAR
Trigger: ACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGGG...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCCCCCGGCGGCGCCCGTaGCAGTCAGCAGCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGPRRRP*QSAAAR
Trigger: ACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGGG...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGATGGATGCGATGGCCTaGATGGAGTCCCCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLMDAMA*MESPAA
Trigger: CGCCGCCGGGGACTCCATCAAGGCCATCGCATCCAT...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGCCAGTCGGGGTCTGGATGGGACAGCTGCACGCGTGGCCTTGTAAAGGAAGGCAGGCACAGGTGCGGCTaGGTGGCCCGGAGCGATCCG +
Preference number: 5 (lower is better)
Translates to: GQSGSGWDSCTRGLVKEGRHRCG*VARSDP
Trigger: CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCT...GCCTTCCTTTACAAGGCCACGCGTGCAGCTGTCCCATCCAGACCCCGACTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GCCTCCCCGTGGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGGGGGACGTGGAGGTCTaGGCCAGTCGGGGTCTGGAT +
Preference number: 5 (lower is better)
Translates to: ASPWHVFSASLDHPAPTEGDVEV*ASRGLD
Trigger: ATCCAGACCCCGACTGGCCAAGACCTCCACGTCCCC...CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS TCA 90 bp CCCCGGGGTGCTGGCTCACTGGTGCGTTCTCGTGCTCGTGCTTCTTaGGGTGCCGGTCCAGGTTGGTCTGCTGCCCGAAGCAGCGGTTGC +
Preference number: 5 (lower is better)
Translates to: PRGAGSLVRSRARAS*GAGPGWSAARSSGC
Trigger: GCAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAACGCACCAGTGAGCCAGCACCCCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS GCA 90 bp TTCCACGTCCGTCAGTATTTGCTCCCATCCGAAGTCTGTCTCCTTTaGCGCCGCCCGGGGCACCACCACGCAGGGGCCCAGCCTCTCCCC +
Preference number: 5 (lower is better)
Translates to: FHVRQYLLPSEVCLL*RRPGHHHAGAQPLP
Trigger: GGGGAGAGGCTGGGCCCCTGCGTGGTGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTCGGATGGGAGCAAATACTGACGGACGTGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS GCA 90 bp GCTGCTCCAGGCTGTACTTGTTGGGGAACATCCGCTCGCAGTCCTTaGACTCGTGGGCTTGGCCGCTGCCACCGCCAAGGCCCTCGGGCT +
Preference number: 5 (lower is better)
Translates to: AAPGCTCWGTSARSP*TRGLGRCHRQGPRA
Trigger: AGCCCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGGAGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 90 bp CCAAGCCGCCCCCAAACTTGGGCTGGCCCTCGGCGGACTTGCCCTTaGCCTTGTCCTTGTCAGGGTCGCTGTCCACGTCGCTGTCCAGGT +
Preference number: 5 (lower is better)
Translates to: PSRPQTWAGPRRTCP*PCPCQGRCPRRCPG
Trigger: ACCTGGACAGCGACGTGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTTCCTCGCCCTCGCCTaGGATCGCATGGTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAFLALA*DRMVSA
Trigger: AGCCGACACCATGCGATCCAAGGCGAGGGCGAGGAA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGACGTCACCGTCACTTTaGGCTAGCTTCCTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: PRPHAGTRQWPPASVSAETSPSL*ASFLAL
Trigger: GAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACGT...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATTACGGCGAGCCCTCCTaGGGGGTGAAGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDYGEPS*GVKSSL
Trigger: CAGCGAGGACTTCACCCCCAAGGAGGGCTCGCCGTA...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCGCTTCCATCTTCCTCTaGGCCCAGACCCCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: YPFPSATPRGHPAVATSFASIFL*AQTPRP
Trigger: TGGCCTGGGGGTCTGGGCCAAGAGGAAGATGGAAGC...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCATATGCTTGTGCTGCTaGAGGCCGGAGGACGTGGCG +
Preference number: 5 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVICLCC*RPEDVA
Trigger: CGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATAT...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCATCTGGCCACAGTCCTaGCACTTGATCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSIWPQS*HLICVR
Trigger: CCGCACGCAGATCAAGTGCAAGGACTGTGGCCAGAT...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCGACTTTGGCTCGGCCTaGACCAGCAAGTTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPDFGSA*TSKLWA
Trigger: CGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGTC...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCACGTGTATCGCTCCTaGCCCTTCCTGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPHVYRS*PFLRMG
Trigger: CCCCATCCTCAGGAAGGGCAAGGAGCGATACACGTG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCTGCCCGAAGCAGCGGTaGCACAGGTGGCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSCPKQR*HRWHLK
Trigger: TTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGGCA...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTAGGTGCCGGTCCAGGTaGGTCTGCTGCCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSRCRSR*VCCPKQ
Trigger: CTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCT...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTCCGTTGGCTGTCTTaGGACGGCCACCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLLRWLS*DGHLHG
Trigger: GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAG...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCTCCGTTGGCTGTCTTaGGACGGCCACCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWLRWLS*DGHLHG
Trigger: GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCGAGTGGGGAAGAAGTaGCGTCCCAAGAGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPRVGKK*RPKRGR
Trigger: CCTCCCTCTCTTGGGACGCAACTTCTTCCCCACTCG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCAGGCTCCCTGGCCCTaGTCATCTCTGGGCACCAAC +
Preference number: 5 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWQAPWP*SSLGTN
Trigger: GTTGGTGCCCAGAGATGACAAGGGCCAGGGAGCCTG...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS TCA 90 bp AGCCCGTCCCCGTGGTCGTGTCCAGGTCGGTCCCCGTGGTGGTGTTaGCGTCCTCAAAGTCACTGCCGTCCGACATGTCGCTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: SPSPWSCPGRSPWWC*RPQSHCRPTCRCSW
Trigger: CCAGGAGCAGCGACATGTCGGACGGCAGTGACTTTGAGGACGTCAACACCACCACGGGGACCGACCTGGACACGACCACGGGGACGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 90 bp TACTTGTTGGGGAACATCCGCTCGCAGTCCTTGCACTCGTGGGCTTaGCCGCTGCCACCGCCAAGGCCCTCGGGCTTGAGCTCCTCAGCC +
Preference number: 5 (lower is better)
Translates to: YLLGNIRSQSLHSWA*PLPPPRPSGLSSSA
Trigger: GGCTGAGGAGCTCAAGCCCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAAGTA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 90 bp AGGCTGTACTTGTTGGGGAACATCCGCTCGCAGTCCTTGCACTCGTaGGCTTGGCCGCTGCCACCGCCAAGGCCCTCGGGCTTGAGCTCC +
Preference number: 5 (lower is better)
Translates to: RLYLLGNIRSQSLHS*AWPLPPPRPSGLSS
Trigger: GGAGCTCAAGCCCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAAGTACAGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGCTTCCATCTTCCTCTaGGCCCAGACCCCCAGGCCA +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSASIFL*AQTPRP
Trigger: TGGCCTGGGGGTCTGGGCCAAGAGGAAGATGGAAGC...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCGAAGTCTGTCTCCTTaGCCGCCGCCCGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: PLADSARQLRWLSLDGHLRSLSP*PPPGAP
Trigger: TGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTCG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCCGCCGCAGGTCCAGCTaGGACTGGAAGAGTTCGTCA +
Preference number: 5 (lower is better)
Translates to: TPVYPFPSATPRGHPAVARRRSS*DWKSSS
Trigger: TGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCG...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCTTGCACTCGTGGGCTaGGCCGCTGCCACCGCCAAG +
Preference number: 5 (lower is better)
Translates to: PLADSARQLRWLSLDGHLLALVG*AAATAK
Trigger: CTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAG...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATCCAGGCTGTACTTGTaGGGGAACATCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: LPRPHAGTRQWPPASVSASRLYL*GNIRSQ
Trigger: CTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGGA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTCCAGGCTGTACTTGTaGGGGAACATCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQSRLYL*GNIRSQ
Trigger: CTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGGA...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTGCTCCAGGCTGTACTaGTTGGGGAACATCCGCTCG +
Preference number: 5 (lower is better)
Translates to: RGHPAVATSFCLSRASTCCSRLY*LGNIRS
Trigger: CGAGCGGATGTTCCCCAACAAGTACAGCCTGGAGCA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGTGCTGTGGATATGCTaGTGCTGCTTGAGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVVLWIC*CCLRPE
Trigger: CTCCGGCCTCAAGCAGCACAAGCATATCCACAGCAC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGTGCTGTGGATATGCTaGTGCTGCTTGAGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: FPSATPRGHPAVATSFCLVLWIC*CCLRPE
Trigger: CTCCGGCCTCAAGCAGCACAAGCATATCCACAGCAC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCGTCCCCGTGGTGGTGTaGACGTCCTCAAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVVPVVV*TSSKSL
Trigger: CAGTGACTTTGAGGACGTCAACACCACCACGGGGAC...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCTCGGCGGACTTGCCCTaGCCCTTGTCCTTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: TVSSIRSLRHRCGLVARSSADLP*PLSLSG
Trigger: CCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGA...GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGGCCCTCGGCGGACTaGCCCTTGCCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: AHWLILRGSSVGCLWTATWPSAD*PLPLSL
Trigger: CAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCA...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCCCCGGCGGCGCCCGTaGCAGTCAGCAGCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGPRRRP*QSAAAR
Trigger: ACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGGG...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTGGCACGTCTTCAGTGCAAATGGATGCGATGGCCTaGATGGAGTCCCCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: SVGLSLLQEPPRGTSSVQMDAMA*MESPAA
Trigger: CGCCGCCGGGGACTCCATCAAGGCCATCGCATCCAT...TTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCGACTTTGGCTCGGCCTaGACCAGCAAGTTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: TPVYPFPSATPRGHPAVADFGSA*TSKLWA
Trigger: CGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGTC...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CATGAAGGGTCTGCCAGGCCCACAGAGGAGGAACCCCACGTGCCCAACCTGGGGCTCCGTTGGCTGTCTTaGGACGGCCACCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: HEGSARPTEEEPHVPNLGLRWLS*DGHLHG
Trigger: GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAG...CCCCAGGTTGGGCACGTGGGGTTCCTCCTCTGTGGGCCTGGCAGACCCTTCATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTTGCGAGGCAGCTCCGTaGGCTGTCTTTGGACGGCCA +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSCEAAP*AVFGRP
Trigger: TGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCA...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGTAGGTTTCAGTCACTaGGGCAGGGGGACGGGACAG +
Preference number: 5 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLVGFSH*GRGTGQ
Trigger: CTGTCCCGTCCCCCTGCCCAAGTGACTGAAACCTAC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS TCA 90 bp GGGCTTGAGCTCCTCAGCCAGGCCCTCGTAGAGCGCAGCCCCCACTaGGCCACACGTGTACTTCTTATGGCGCCGCAGGTCCAGCTTGGA +
Preference number: 5 (lower is better)
Translates to: GLELLSQALVERSPH*ATRVLLMAPQVQLG
Trigger: TCCAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTGTGGCTCAGTGGGGGCTGCGCTCTACGAGGGCCTGGCTGAGGAGCTCAAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 90 bp GGCGCCCGTTGCAGTCAGCAGCTGCTCGTCGGGTGGCGGGAAGAATaGGTGCTGGGAATAGAAGACAGGCACCTCGGCCACGCTGTTCGG +
Preference number: 5 (lower is better)
Translates to: GARCSQQLLVGWREE*VLGIEDRHLGHAVR
Trigger: CCGAACAGCGTGGCCGAGGTGCCTGTCTTCTATTCCCAGCACTCATTCTTCCCGCCACCCGACGAGCAGCTGCTGACTGCAACGGGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 90 bp GGGTGCTGGCTCACTGGTGCGTTCTCGTGCTCGTGCTTCTTGAGGTaGCGGTCCAGGTTGGTCTGCTGCCCGAAGCAGCGGTTGCACAGG +
Preference number: 5 (lower is better)
Translates to: GCWLTGAFSCSCFLR*RSRLVCCPKQRLHR
Trigger: CCTGTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAACGCACCAGTGAGCCAGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS GCA 90 bp TCGTCCTCCTCCAGGTCATCGTCGTCCTCCTCCTCCACGTCCTCCTaGTTCTCACTGGCTAGGCCTGGACACTGGGCACTGCCGTCCACG +
Preference number: 5 (lower is better)
Translates to: SSSSRSSSSSSSTSS*FSLARPGHWALPST
Trigger: CGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGGACGTGGAGGAGGAGGACGACGATGACCTGGAGGAGGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 90 bp CCCGGCTTCCATCTTCCTCTTGGCCCAGACCCCCAGGCCAGCCCCTaGGATGGAGGACTCTCGGAGCTCGAAGTCTGCTGGGATCGGAAT +
Preference number: 5 (lower is better)
Translates to: PGFHLPLGPDPQASP*DGGLSELEVCWDRN
Trigger: ATTCCGATCCCAGCAGACTTCGAGCTCCGAGAGTCCTCCATCCCAGGGGCTGGCCTGGGGGTCTGGGCCAAGAGGAAGATGGAAGCCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS-3UTR CAA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGTCTCTCTCCTCCTCCTaGAGTCCAGAAGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQSLSSS*SPEAAT
Trigger: TGTGGCTGCTTCTGGACTCAAGGAGGAGGAGAGAGA...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
CDS-3UTR CAA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATCTCTCTCCTCCTCCTaGAGTCCAGAAGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: LPRPHAGTRQWPPASVSASLSSS*SPEAAT
Trigger: TGTGGCTGCTTCTGGACTCAAGGAGGAGGAGAGAGA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
CDS-3UTR CAA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGACGTCACCGTCACTTTaGGCTAGCTTCCTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLTSPSL*ASFLAL
Trigger: GAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACGT...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGACGTCACCGTCACTTTaGGCTAGCTTCCTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWTSPSL*ASFLAL
Trigger: GAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACGT...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCCAGCCCCCGCCTGATTaGCATCCACGCAGAACTTCT +
Preference number: 5 (lower is better)
Translates to: YPFPSATPRGHPAVATSFQPPPD*HPRRTS
Trigger: AGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCTG...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGCCACACGGATGTACTaGAGCCAGCTGCCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGATRMY*SQLPAP
Trigger: GGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGGC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGGGCACCCAGCATCGCCGCAGGTCCAGCTaGGACTGGAAGAGTTCGTCA +
Preference number: 5 (lower is better)
Translates to: MVHGCGPAPLVLPRGTQHRRRSS*DWKSSS
Trigger: TGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCG...ATGCTGGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGGGACACTGGTCGCATTaGTACTCGCGCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: DCVVHPESQAQVRLGGPEGHWSH*YSRSSV
Trigger: CACGGAGGAGCGCGAGTACAAATGCGACCAGTGTCC...CTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCTCACATTCGAAGCGTTaGCCGCTGTCGTGGGACATC +
Preference number: 5 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPSHSKR*PLSWDI
Trigger: GATGTCCCACGACAGCGGCAAACGCTTCGAATGTGA...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCACATTCGAAGCGTTaGCCGCTGTCGTGGGACATC +
Preference number: 5 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVSHSKR*PLSWDI
Trigger: GATGTCCCACGACAGCGGCAAACGCTTCGAATGTGA...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGGTGCTGTGGATATGCTaGTGCTGCTTGAGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWVLWIC*CCLRPE
Trigger: CTCCGGCCTCAAGCAGCACAAGCATATCCACAGCAC...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTCGGCGTGCATCCGCTaGTGCCGGCACAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGSACIR*CRHRLE
Trigger: CTCCAACCTGTGCCGGCACAAGCGGATGCACGCCGA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTCCACAGTCCTTGCACTaGATCTGCGTGCGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSPQSLH*ICVRQS
Trigger: CGACTGCCGCACGCAGATCAAGTGCAAGGACTGTGG...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACAGGGGACTGGGGAGCTaGGCGTCCTGGGTGTGGTTC +
Preference number: 5 (lower is better)
Translates to: CPLADSARQLRWLSLDGHRGLGS*ASWVWF
Trigger: GAACCACACCCAGGACGCCAAGCTCCCCAGTCCCCT...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCGTGCCCTGGCTGCTGTaGCTGACGGCGGAGACCAGG +
Preference number: 5 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSVPWLL*LTAETR
Trigger: CCTGGTCTCCGCCGTCAGCAACAGCAGCCAGGGCAC...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGCCTTGACCAGCAAGTaGTGGGCGAGGGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGALTSK*WARARS
Trigger: GGACCGAGCCCTCGCCCACAACTTGCTGGTCAAGGC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATGACTTTGGCTCGGCCTaGACCAGCAAGTTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDDFGSA*TSKLWA
Trigger: CGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGTC...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGATGGGCTTCACGTCTTaGGGCTTGGTGGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEMGFTS*GLVVRS
Trigger: TGATCTCACCACCAAGCCCAAAGACGTGAAGCCCAT...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACAGGTGCCGGTCCAGGTaGGTCTGCTGCCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: CPLADSARQLRWLSLDGHRCRSR*VCCPKQ
Trigger: CTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCT...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTCCTGTCTTGCCTCGTaGTGCAGATCTGGCGTGGGA +
Preference number: 5 (lower is better)
Translates to: TPVYPFPSATPRGHPAVASCLAS*CRSGVG
Trigger: TCCCACGCCAGATCTGCACAACGAGGCAAGACAGGA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGTCTCTCTCCTCCTCCTaGAGTCCAGAAGCAGCCACA +
Preference number: 5 (lower is better)
Translates to: AHQSIHSLPRPHAGTRQWSLSSS*SPEAAT
Trigger: TGTGGCTGCTTCTGGACTCAAGGAGGAGGAGAGAGA...CCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
CDS-3UTR CAA 90 bp AGCGGAGGGCAGGTGCGAGGAGGCCTCCTTCGGAATTTCCATTTGGGGGATGGGTTCCTCGCCCTCGCCTaGGATCGCATGGTGTCGGCT +
Preference number: 5 (lower is better)
Translates to: SGGQVRGGLLRNFHLGDGFLALA*DRMVSA
Trigger: AGCCGACACCATGCGATCCAAGGCGAGGGCGAGGAA...CCCATCCCCCAAATGGAAATTCCGAAGGAGGCCTCCTCGCACCTGCCCTCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTATCCGCTCGCAGTCCTaGCACTCGTGGGCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSIRSQS*HSWAWP
Trigger: CGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGAT...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCGGACACTGGTCGCATTaGTACTCGCGCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: AHWLILRGSSVGCLWTATGHWSH*YSRSSV
Trigger: CACGGAGGAGCGCGAGTACAAATGCGACCAGTGTCC...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCATTCCAGTTGAAGGCCTaGGGACACTGGTCGCATTTG +
Preference number: 5 (lower is better)
Translates to: LPRPHAGTRQWPPASVSAFQLKA*GHWSHL
Trigger: CAAATGCGACCAGTGTCCCAAGGCCTTCAACTGGAA...TGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTCACATTCGAAGCGTTaGCCGCTGTCGTGGGACATC +
Preference number: 5 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLSHSKR*PLSWDI
Trigger: GATGTCCCACGACAGCGGCAAACGCTTCGAATGTGA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTTCGGCGTGCATCCGCTaGTGCCGGCACAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRSACIR*CRHRLE
Trigger: CTCCAACCTGTGCCGGCACAAGCGGATGCACGCCGA...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCTTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCCCACAGTCCTTGCACTaGATCTGCGTGCGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: FFGRLHGSRVWPRASCSAPQSLH*ICVRQS
Trigger: CGACTGCCGCACGCAGATCAAGTGCAAGGACTGTGG...GGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTATCTGGCCACAGTCCTaGCACTTGATCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSIWPQS*HLICVR
Trigger: CCGCACGCAGATCAAGTGCAAGGACTGTGGCCAGAT...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGGGCTGGGGGAGGGTTTaGCCTTGTCCATCATGGGGC +
Preference number: 5 (lower is better)
Translates to: PLADSARQLRWLSLDGHLGWGRV*PCPSWG
Trigger: GCCCCATGATGGACAAGGCAAAACCCTCCCCCAGCC...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGGTTCAGGGGGCTCTaGAGCAGCGATGTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: AHWLILRGSSVGCLWTATWFRGL*SSDVGG
Trigger: ACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACCA...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGTCGGCGGACTTGCCCTaGCCCTTGTCCTTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: SDVAPVTFNQASREPWEGSADLP*PLSLSG
Trigger: CCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGA...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGAAGCCGCCCCCAAACTaGGGCTGGCCCTCGGCGGAC +
Preference number: 5 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRKPPPN*GWPSAD
Trigger: GTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTT...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCGCCTTGACCAGCAAGTaGTGGGCGAGGGCTCGGTCC +
Preference number: 5 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSALTSK*WARARS
Trigger: GGACCGAGCCCTCGCCCACAACTTGCTGGTCAAGGC...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCTTCACGTCTTTGGGCTaGGTGGTGAGATCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: RGHPAVATSFCLSRASTCFTSLG*VVRSKG
Trigger: CCCCTTTGATCTCACCACCAAGCCCAAAGACGTGAA...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCATGGGCTTCACGTCTTaGGGCTTGGTGGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPMGFTS*GLVVRS
Trigger: TGATCTCACCACCAAGCCCAAAGACGTGAAGCCCAT...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCACGTGTATCGCTCCTaGCCCTTCCTGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: AHWLILRGSSVGCLWTATHVYRS*PFLRMG
Trigger: CCCCATCCTCAGGAAGGGCAAGGAGCGATACACGTG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAAAGGCTTCTCCTTGTaGTGGATGTTCCGGACGTGC +
Preference number: 5 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQKGFSL*WMFRTC
Trigger: GCACGTCCGGAACATCCACAACAAGGAGAAGCCTTT...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTTTGCACAGGTGGCACTaGAAAGGCTTCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRLHRWH*KGFSLL
Trigger: CAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCAA...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCTCTAAAAGTGCGTGGTaGTCCGACTCTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPSKSAW*SDSEVG
Trigger: TCCCACCTCAGAGTCGGACAACCACGCACTTTTAGA...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTCCGTTGGCTGTCTTaGGACGGCCACCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: CPLADSARQLRWLSLDGHLRWLS*DGHLHG
Trigger: GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAG...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGGCACCCAGCATCACCTaGGCTTATACAAATAGGGAC +
Preference number: 5 (lower is better)
Translates to: PRPHAGTRQWPPASVSAEAPSIT*AYTNRD
Trigger: GTCCCTATTTGTATAAGCCAAGGTGATGCTGGGTGC...CTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGAGCGATCCGCTGGGATaGCTCCCCAGGGCAGCCACG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGSDPLG*LPRAAT
Trigger: CGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCT...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CCACGTGGCGGTCCTGACACCAATTCCATGTCACACGAGGGCAGGCACACTTCCTGCTGTCTCTGCTCCTaGCGGCAGGTTCCCCCGACG +
Preference number: 5 (lower is better)
Translates to: PRGGPDTNSMSHEGRHTSCCLCS*RQVPPT
Trigger: CGTCGGGGGAACCTGCCGCAAGGAGCAGAGACAGCA...GGAAGTGTGCCTGCCCTCGTGTGACATGGAATTGGTGTCAGGACCGCCACGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGCCTGAGCAGTTGTGTTaGCAGATCCTGGATCCTTCC +
Preference number: 5 (lower is better)
Translates to: FRDPTRAPGSGHQLLSQQPEQLC*QILDPS
Trigger: GGAAGGATCCAGGATCTGCAAACACAACTGCTCAGG...CTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGAGGACGCCAGGGCCCTaGGAATTTCCAGGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLRTPGP*EFPGLD
Trigger: GTCCAGCCCTGGAAATTCCAAGGGCCCTGGCGTCCT...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS GCA 90 bp CCACGTCCTCCTGCTTCTCACTGGCTAGGCCTGGACACTGGGCACTaGCGTCCACGATCTGCATGTCCGCCCGTTTCTCTGTTCGCGTTG +
Preference number: 5 (lower is better)
Translates to: PRPPASHWLGLDTGH*RPRSACPPVSLFAL
Trigger: CAACGCGAACAGAGAAACGGGCGGACATGCAGATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGGACGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCGCCAGCAGGTCCCGGTaGGGCTCATACATATTATTT +
Preference number: 5 (lower is better)
Translates to: FPSATPRGHPAVATSFCLASRSR*GSYILF
Trigger: AAATAATATGTATGAGCCCAACCGGGACCTGCTGGC...GAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCGCCAGCAGGTCCCGGTaGGGCTCATACATATTATTT +
Preference number: 5 (lower is better)
Translates to: RGHPAVATSFCLSRASTCASRSR*GSYILF
Trigger: AAATAATATGTATGAGCCCAACCGGGACCTGCTGGC...GCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCCAGCCCCCGCCTGATTaGCATCCACGCAGAACTTCT +
Preference number: 5 (lower is better)
Translates to: AHWLILRGSSVGCLWTATQPPPD*HPRRTS
Trigger: AGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCTG...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCCCTGCCCGTCAGCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTGGCCACACGGATGTACTaGAGCCAGCTGCCAGCCCCC +
Preference number: 5 (lower is better)
Translates to: APARQLPNGRLRTHSANLATRMY*SQLPAP
Trigger: GGGGGCTGGCAGCTGGCTCAAGTACATCCGTGTGGC...CAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGCTGACGGGCAGGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR CAA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGCGCCGCAGGTCCAGCTaGGACTGGAAGAGTTCGTCA +
Preference number: 5 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPRRRSS*DWKSSS
Trigger: TGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCG...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCTCGTTGTGCAGATCTGGCGTGGGAGGAATCCCTTTCACTGTGATCCGTCGGATCCGCTCGCAGTCCTaGCACTCGTGGGCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: ASLCRSGVGGIPFTVIRRIRSQS*HSWAWP
Trigger: CGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGAT...CCGACGGATCACAGTGAAAGGGATTCCTCCCACGCCAGATCTGCACAACGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGATCCGCTCGCAGTCCTaGCACTCGTGGGCTTGGCCG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGIRSQS*HSWAWP
Trigger: CGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGAT...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGGACACTGGTCGCATTaGTACTCGCGCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGGHWSH*YSRSSV
Trigger: CACGGAGGAGCGCGAGTACAAATGCGACCAGTGTCC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTTCCAGTTGAAGGCCTaGGGACACTGGTCGCATTTG +
Preference number: 5 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAFQLKA*GHWSHL
Trigger: CAAATGCGACCAGTGTCCCAAGGCCTTCAACTGGAA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACTGTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCTCACATTCGAAGCGTTaGCCGCTGTCGTGGGACATC +
Preference number: 5 (lower is better)
Translates to: TVSSIRSLRHRCGLVARSSHSKR*PLSWDI
Trigger: GATGTCCCACGACAGCGGCAAACGCTTCGAATGTGA...GCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGATATGCTTGTGCTGCTaGAGGCCGGAGGACGTGGCG +
Preference number: 5 (lower is better)
Translates to: PLADSARQLRWLSLDGHLICLCC*RPEDVA
Trigger: CGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATAT...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGTCGGCGTGCATCCGCTaGTGCCGGCACAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGSACIR*CRHRLE
Trigger: CTCCAACCTGTGCCGGCACAAGCGGATGCACGCCGA...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTGCTCCTTGCGGCAGGTTCCCCCGACGCCCTTCTGTTCTCAAGCTGTGTCTGGCTGGGGGAGGGTTTaGCCTTGTCCATCATGGGGC +
Preference number: 5 (lower is better)
Translates to: LCSLRQVPPTPFCSQAVSGWGRV*PCPSWG
Trigger: GCCCCATGATGGACAAGGCAAAACCCTCCCCCAGCC...AGACACAGCTTGAGAACAGAAGGGCGTCGGGGGAACCTGCCGCAAGGAGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTGGTTCAGGGGGCTCTaGAGCAGCGATGTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGWFRGL*SSDVGG
Trigger: ACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACCA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCCACGTGTATCGCTCCTaGCCCTTCCTGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGHVYRS*PFLRMG
Trigger: CCCCATCCTCAGGAAGGGCAAGGAGCGATACACGTG...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGCACGTGTATCGCTCCTaGCCCTTCCTGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: SDVAPVTFNQASREPWEGHVYRS*PFLRMG
Trigger: CCCCATCCTCAGGAAGGGCAAGGAGCGATACACGTG...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCAAAGGCTTCTCCTTGTaGTGGATGTTCCGGACGTGC +
Preference number: 5 (lower is better)
Translates to: YPFPSATPRGHPAVATSFKGFSL*WMFRTC
Trigger: GCACGTCCGGAACATCCACAACAAGGAGAAGCCTTT...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCAAAGGCTTCTCCTTGTaGTGGATGTTCCGGACGTGC +
Preference number: 5 (lower is better)
Translates to: TPVYPFPSATPRGHPAVAKGFSL*WMFRTC
Trigger: GCACGTCCGGAACATCCACAACAAGGAGAAGCCTTT...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGAAAGGCTTCTCCTTGTaGTGGATGTTCCGGACGTGC +
Preference number: 5 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLKGFSL*WMFRTC
Trigger: GCACGTCCGGAACATCCACAACAAGGAGAAGCCTTT...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGAGGTGCCGGTCCAGGTaGGTCTGCTGCCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGRCRSR*VCCPKQ
Trigger: CTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCT...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCTCCCCGTGGCACGTCTTCAGTGCAAGCCTGGACCACCCGGCACCCACAGAGTCTAAAAGTGCGTGGTaGTCCGACTCTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: ASPWHVFSASLDHPAPTESKSAW*SDSEVG
Trigger: TCCCACCTCAGAGTCGGACAACCACGCACTTTTAGA...CTCTGTGGGTGCCGGGTGGTCCAGGCTTGCACTGAAGACGTGCCACGGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTTTCTCTGTTCGCGTaGATGCTTGGTTCATCTCAC +
Preference number: 5 (lower is better)
Translates to: RDPTRAPGSGHQLLSQQSVSLFA*MLGSSH
Trigger: GTGAGATGAACCAAGCATCAACGCGAACAGAGAAAC...GCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTCCACACCAAGGCGGCTaGCACCACTCCTGTTTGTAT +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSPHQGG*HHSCLY
Trigger: ATACAAACAGGAGTGGTGCAAGCCGCCTTGGTGTGG...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGGTGCAACCAGGACTCTaGGGAAAGGTGGAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLVQPGL*GKVEGK
Trigger: CTTTCCTTCCACCTTTCCCAAGAGTCCTGGTTGCAC...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCAAAGGGACAGCATCATaGCATATGCCTTCGGGTGTG +
Preference number: 5 (lower is better)
Translates to: HSLPRPHAGTRQWPPASVKGTAS*HMPSGV
Trigger: CACACCCGAAGGCATATGCAATGATGCTGTCCCTTT...GACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS CCA 90 bp CAGGCCAGCCCCTGGGATGGAGGACTCTCGGAGCTCGAAGTCTGCTaGGATCGGAATGTCTTCAGGAATGTAGACAGGGGCCTCGTACGG +
Preference number: 5 (lower is better)
Translates to: QASPWDGGLSELEVC*DRNVFRNVDRGLVR
Trigger: CCGTACGAGGCCCCTGTCTACATTCCTGAAGACATTCCGATCCCAGCAGACTTCGAGCTCCGAGAGTCCTCCATCCCAGGGGCTGGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CCA 90 bp CTTCCATCTTCCTCTTGGCCCAGACCCCCAGGCCAGCCCCTGGGATaGAGGACTCTCGGAGCTCGAAGTCTGCTGGGATCGGAATGTCTT +
Preference number: 5 (lower is better)
Translates to: LPSSSWPRPPGQPLG*RTLGARSLLGSECL
Trigger: AAGACATTCCGATCCCAGCAGACTTCGAGCTCCGAGAGTCCTCCATCCCAGGGGCTGGCCTGGGGGTCTGGGCCAAGAGGAAGATGGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CCA 90 bp TCCTCCTCCACGTCCTCCTGCTTCTCACTGGCTAGGCCTGGACACTaGGCACTGCCGTCCACGATCTGCATGTCCGCCCGTTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SSSTSSCFSLARPGH*ALPSTICMSARFSV
Trigger: AACAGAGAAACGGGCGGACATGCAGATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGGACGTGGAGGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGTACGGCGAGCCCTCCTaGGGGGTGAAGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWYGEPS*GVKSSL
Trigger: CAGCGAGGACTTCACCCCCAAGGAGGGCTCGCCGTA...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTGCTCCAGGCTGTACTaGTTGGGGAACATCCGCTCG +
Preference number: 5 (lower is better)
Translates to: CPLADSARQLRWLSLDGHCSRLY*LGNIRS
Trigger: CGAGCGGATGTTCCCCAACAAGTACAGCCTGGAGCA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTTTCCAGTTGAAGGCCTaGGGACACTGGTCGCATTTG +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSFQLKA*GHWSHL
Trigger: CAAATGCGACCAGTGTCCCAAGGCCTTCAACTGGAA...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGATCTGGCCACAGTCCTaGCACTTGATCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPIWPQS*HLICVR
Trigger: CCGCACGCAGATCAAGTGCAAGGACTGTGGCCAGAT...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGGCTGGGGGAGGGTTTaGCCTTGTCCATCATGGGGC +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGGWGRV*PCPSWG
Trigger: GCCCCATGATGGACAAGGCAAAACCCTCCCCCAGCC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCGTCCCCGTGGTGGTGTaGACGTCCTCAAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGVPVVV*TSSKSL
Trigger: CAGTGACTTTGAGGACGTCAACACCACCACGGGGAC...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCGCATCCCTGTCCATGCTGCACAGTTACATGGCCCCGTTACGGTGTGGTGACATGGCCCTCGGCGGACTaGCCCTTGCCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: SHPCPCCTVTWPRYGVVTWPSAD*PLPLSL
Trigger: CAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCA...TGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTAAAGGCTTCTCCTTGTaGTGGATGTTCCGGACGTGC +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSKGFSL*WMFRTC
Trigger: GCACGTCCGGAACATCCACAACAAGGAGAAGCCTTT...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCTTGAAAGGCTTCTCCTaGTTGTGGATGTTCCGGACG +
Preference number: 5 (lower is better)
Translates to: TPVYPFPSATPRGHPAVALKGFS*LWMFRT
Trigger: CGTCCGGAACATCCACAACAAGGAGAAGCCTTTCAA...GGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACGCGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGTTGAAAGGCTTCTCCTaGTTGTGGATGTTCCGGACG +
Preference number: 5 (lower is better)
Translates to: TRAPGSGHQLLSQQSVHLLKGFS*LWMFRT
Trigger: CGTCCGGAACATCCACAACAAGGAGAAGCCTTTCAA...CAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ATGGCCCCAGCGCACGCACAGGTGGGTCCTGTCTTGCCTCGTTGTGCAGATCTGTGCCCGAAGCAGCGGTaGCACAGGTGGCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: MAPAHAQVGPVLPRCADLCPKQR*HRWHLK
Trigger: TTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGGCA...CAGATCTGCACAACGAGGCAAGACAGGACCCACCTGTGCGTGCGCTGGGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTGCCCGAAGCAGCGGTaGCACAGGTGGCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: CPLADSARQLRWLSLDGHCPKQR*HRWHLK
Trigger: TTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGGCA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp AACCCGCAGGAAGAGCGACGTGACGACTGTGTCGTCCATCCGGAGTCTCAGGCATCGTGCTCGTGCTTCTaGAGGTGCCGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: NPQEERRDDCVVHPESQASCSCF*RCRSRL
Trigger: CAACCTGGACCGGCACCTCAAGAAGCACGAGCACGA...TGCCTGAGACTCCGGATGGACGACACAGTCGTCACGTCGCTCTTCCTGCGGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGTGGCCCCGCGCCTCTaGTTCTGCCTCGGGGCACCC +
Preference number: 5 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPVAPRL*FCLGAP
Trigger: GGGTGCCCCGAGGCAGAACAAGAGGCGCGGGGCCAC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp AGCGGAGGGCAGGTGCGAGGAGGCCTCCTTCGGAATTTCCATTTGGGGGATGGGCTGACCCAGGGGATGTaGTGGAAACGCGTGAGAAGG +
Preference number: 5 (lower is better)
Translates to: SGGQVRGGLLRNFHLGDGLTQGM*WKRVRR
Trigger: CCTTCTCACGCGTTTCCACAACATCCCCTGGGTCAG...CCCATCCCCCAAATGGAAATTCCGAAGGAGGCCTCCTCGCACCTGCCCTCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS GCA 90 bp TTGCTTCCAAACCCTCTTTGGCCAATGAGAGAAGCCAGGCCGCTCTaGTTCCAGGGCCCCGAGCAGGGAACAGCACTGGGATGCAGCATC +
Preference number: 5 (lower is better)
Translates to: LLPNPLWPMREARPL*FQGPEQGTALGCSI
Trigger: GATGCTGCATCCCAGTGCTGTTCCCTGCTCGGGGCCCTGGAAGCAGAGCGGCCTGGCTTCTCTCATTGGCCAAAGAGGGTTTGGAAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512462.5
CDS CCA 90 bp TGGGCGACATGGCACTGTCCTCGGCCTCGTCCTCCGCGCTGTGGCTaGCCAGCAGGTCCCGGTTGGGCTCATACATATTATTTACAACGT +
Preference number: 5 (lower is better)
Translates to: WATWHCPRPRPPRCG*PAGPGWAHTYYLQR
Trigger: ACGTTGTAAATAATATGTATGAGCCCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACGAGGCCGAGGACAGTGCCATGTCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CCA 90 bp GAGCCACACGTGTACTTCTTATGGCGCCGCAGGTCCAGCTTGGACTaGAAGAGTTCGTCACACTCGTCACAGCGGAACGTGGGCTCCTCG +
Preference number: 5 (lower is better)
Translates to: EPHVYFLWRRRSSLD*KSSSHSSQRNVGSS
Trigger: CGAGGAGCCCACGTTCCGCTGTGACGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTGTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTaGGAGGGGGTGTGGAGAGGAGTGTCTTCGGAAAGGGACAGCATC +
Preference number: 5 (lower is better)
Translates to: SDVAPVTFNQASREP*EGVWRGVSSERDSI
Trigger: GATGCTGTCCCTTTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAATACGGCGAGCCCTCCTaGGGGGTGAAGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQYGEPS*GVKSSL
Trigger: CAGCGAGGACTTCACCCCCAAGGAGGGCTCGCCGTA...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCTCCCACAGCGATTTCCGTATTAATTGGGAACTGCGCCTCTTTCGCGTCAGCCCAAGGCCCTCGGGCTaGAGCTCCTCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: FSHSDFRINWELRLFRVSPRPSG*SSSARP
Trigger: GGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTGG...GCTGACGCGAAAGAGGCGCAGTTCCCAATTAATACGGAAATCGCTGTGGGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CCAGACTCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGTGCTCCAGGCTGTACTaGTTGGGGAACATCCGCTCG +
Preference number: 5 (lower is better)
Translates to: PDSDVAPVTFNQASREPWCSRLY*LGNIRS
Trigger: CGAGCGGATGTTCCCCAACAAGTACAGCCTGGAGCA...CCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGATATGCTTGTGCTGCTaGAGGCCGGAGGACGTGGCG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGICLCC*RPEDVA
Trigger: CGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATAT...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGTGGTTCAGGGGGCTCTaGAGCAGCGATGTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGWFRGL*SSDVGG
Trigger: ACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACCA...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGACTTTGGCTCGGCCTaGACCAGCAAGTTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGDFGSA*TSKLWA
Trigger: CGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGTC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCAGGTGTCTGGTGAGATaGGCTGATCTGGGGAAGATC +
Preference number: 5 (lower is better)
Translates to: AHWLILRGSSVGCLWTATRCLVR*ADLGKI
Trigger: GATCTTCCCCAGATCAGCCAATCTCACCAGACACCT...GGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGTTGAAAGGCTTCTCCTaGTTGTGGATGTTCCGGACG +
Preference number: 5 (lower is better)
Translates to: FGRLHGSRVWPRASCSASLKGFS*LWMFRT
Trigger: CGTCCGGAACATCCACAACAAGGAGAAGCCTTTCAA...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GTGTCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATTTGCACAGGTGGCACTaGAAAGGCTTCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VSSIRSLRHRCGLVARSDLHRWH*KGFSLL
Trigger: CAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCAA...ATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAAAGGTGCCGGTCCAGGTaGGTCTGCTGCCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQRCRSR*VCCPKQ
Trigger: CTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCT...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTTCGTGCTCGTGCTTCTaGAGGTGCCGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSSCSCF*RCRSRL
Trigger: CAACCTGGACCGGCACCTCAAGAAGCACGAGCACGA...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGTGCGAGGCAGCTCCGTaGGCTGTCTTTGGACGGCCA +
Preference number: 5 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRCEAAP*AVFGRP
Trigger: TGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCA...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTGGCCACCAGCTTCCAGGCAGACTCGGGTTaGCAAATGAGCTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: YPFPSATPRGHPAVATSFQADSG*QMSSNF
Trigger: GAAATTTGAGCTCATTTGCAAACCCGAGTCTGCCTG...GAAGCTGGTGGCCACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGGCACCCAGCATCACCTaGGCTTATACAAATAGGGAC +
Preference number: 5 (lower is better)
Translates to: FGRLHGSRVWPRASCSASAPSIT*AYTNRD
Trigger: GTCCCTATTTGTATAAGCCAAGGTGATGCTGGGTGC...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp CGGGCACCCGGCAGTGGCCACCAGCTTCTGTCTCAGCAGAGCGTCCACCTGCCCCCTTATCACACGGTTTaGGTCCTTCACCAGATACTT +
Preference number: 5 (lower is better)
Translates to: RAPGSGHQLLSQQSVHLPPYHTV*VLHQIL
Trigger: AAGTATCTGGTGAAGGACCAAAACCGTGTGATAAGG...GGGCAGGTGGACGCTCTGCTGAGACAGAAGCTGGTGGCCACTGCCGGGTGCCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TCCGTCGGGTTGAGCCTCCTGCAGGAGCCTCCCCGTGGCACGTCTTCAGTGCAACAGGAGAAACTGGGCTaGCCATCATTTTCAGGGGGA +
Preference number: 5 (lower is better)
Translates to: SVGLSLLQEPPRGTSSVQQEKLG*PSFSGG
Trigger: TCCCCCTGAAAATGATGGCAAGCCCAGTTTCTCCTG...TTGCACTGAAGACGTGCCACGGGGAGGCTCCTGCAGGAGGCTCAACCCGACGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTATTCAGGCAAGTGTTTaGCAGACGCTCATGGGGAAG +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSIQASV*QTLMGK
Trigger: CTTCCCCATGAGCGTCTGCAAAACACTTGCCTGAAT...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GGACGTGGCCAAGGCCCTGCCTTCAGAGGACGGCGCTGGGTTCCCGCGTGGGGTTCACAGTATCACTCATaGCTACAGAGACACAGTTTC +
Preference number: 5 (lower is better)
Translates to: GRGQGPAFRGRRWVPAWGSQYHS*LQRHSF
Trigger: GAAACTGTGTCTCTGTAGCAATGAGTGATACTGTGA...ACCCCACGCGGGAACCCAGCGCCGTCCTCTGAAGGCAGGGCCTTGGCCACGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS CCA 90 bp CACCGTCACTTTTGGCTAGCTTCCTCGCCCTCGCCTTGGATCGCATaGTGTCGGCTCGCGGAATCTCTCTCCTCCTCCTTGAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: HRHFWLASSPSPWIA*CRLAESLSSSLSPE
Trigger: TTCTGGACTCAAGGAGGAGGAGAGAGATTCCGCGAGCCGACACCATGCGATCCAAGGCGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CCA 90 bp CCACTGAGCCACACGTGTACTTCTTATGGCGCCGCAGGTCCAGCTTaGACTGGAAGAGTTCGTCACACTCGTCACAGCGGAACGTGGGCT +
Preference number: 5 (lower is better)
Translates to: PLSHTCTSYGAAGPA*TGRVRHTRHSGTWA
Trigger: AGCCCACGTTCCGCTGTGACGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTGTGGCTCAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACCGCCGCAGGTCCAGCTaGGACTGGAAGAGTTCGTCA +
Preference number: 5 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDRRRSS*DWKSSS
Trigger: TGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCG...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACCAAGGCCCTCGGGCTaGAGCTCCTCAGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRPRPSG*SSSARP
Trigger: GGGCCTGGCTGAGGAGCTCAAGCCCGAGGGCCTTGG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGTGCTGTGGATATGCTaGTGCTGCTTGAGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGVLWIC*CCLRPE
Trigger: CTCCGGCCTCAAGCAGCACAAGCATATCCACAGCAC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGTGCTGTGGATATGCTaGTGCTGCTTGAGGCCGGAG +
Preference number: 5 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSVLWIC*CCLRPE
Trigger: CTCCGGCCTCAAGCAGCACAAGCATATCCACAGCAC...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGCCACAGTCCTTGCACTaGATCTGCGTGCGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWPQSLH*ICVRQS
Trigger: CGACTGCCGCACGCAGATCAAGTGCAAGGACTGTGG...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGTGGTTCAGGGGGCTCTaGAGCAGCGATGTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWWFRGL*SSDVGG
Trigger: ACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACCA...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGTGGTTCAGGGGGCTCTaGAGCAGCGATGTGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRWFRGL*SSDVGG
Trigger: ACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACCA...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGTCCCCGTGGTGGTGTaGACGTCCTCAAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGVPVVV*TSSKSL
Trigger: CAGTGACTTTGAGGACGTCAACACCACCACGGGGAC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGTCGGCGGACTTGCCCTaGCCCTTGTCCTTGTCAGGG +
Preference number: 5 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLSADLP*PLSLSG
Trigger: CCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGA...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTTCACGTCTTTGGGCTaGGTGGTGAGATCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGFTSLG*VVRSKG
Trigger: CCCCTTTGATCTCACCACCAAGCCCAAAGACGTGAA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp AGCGGAGGGCAGGTGCGAGGAGGCCTCCTTCGGAATTTCCATTTGGGGGATGGGATGGGCTTCACGTCTTaGGGCTTGGTGGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: SGGQVRGGLLRNFHLGDGMGFTS*GLVVRS
Trigger: TGATCTCACCACCAAGCCCAAAGACGTGAAGCCCAT...CCCATCCCCCAAATGGAAATTCCGAAGGAGGCCTCCTCGCACCTGCCCTCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGAGGTGTCTGGTGAGATaGGCTGATCTGGGGAAGATC +
Preference number: 5 (lower is better)
Translates to: PLADSARQLRWLSLDGHLRCLVR*ADLGKI
Trigger: GATCTTCCCCAGATCAGCCAATCTCACCAGACACCT...CAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGTCTAAAAGTGCGTGGTaGTCCGACTCTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPSKSAW*SDSEVG
Trigger: TCCCACCTCAGAGTCGGACAACCACGCACTTTTAGA...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACTCTAAAAGTGCGTGGTaGTCCGACTCTGAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: CPLADSARQLRWLSLDGHSKSAW*SDSEVG
Trigger: TCCCACCTCAGAGTCGGACAACCACGCACTTTTAGA...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCAGTTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTAC +
Preference number: 5 (lower is better)
Translates to: EHTSLSIPFRDPTRAPGSSQDQS*EMVRLY
Trigger: GTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGA...ACTGCCGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCTCCGTTGGCTGTCTTaGGACGGCCACCTGCATGGC +
Preference number: 5 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLLRWLS*DGHLHG
Trigger: GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGAAGGCACAGGTGCGGCTaGGTGGCCCGGAGCGATCCG +
Preference number: 5 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRRHRCG*VARSDP
Trigger: CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCT...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp GCGGCTTGGTGGCCCGGAGCGATCCGCTGGGATTGCTCCCCAGGGCAGCCACGTAATGCAAGGATGGTTTaGTCACAGTATCACTCATTG +
Preference number: 5 (lower is better)
Translates to: AAWWPGAIRWDCSPGQPRNARMV*SQYHSL
Trigger: CAATGAGTGATACTGTGACAAAACCATCCTTGCATT...ACGTGGCTGCCCTGGGGAGCAATCCCAGCGGATCGCTCCGGGCCACCAAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS CCA 90 bp TTACAACGTCACCGTCACTTTTGGCTAGCTTCCTCGCCCTCGCCTTaGATCGCATGGTGTCGGCTCGCGGAATCTCTCTCCTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LQRHRHFWLASSPSP*IAWCRLAESLSSSL
Trigger: CAAGGAGGAGGAGAGAGATTCCGCGAGCCGACACCATGCGATCCAAGGCGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACGTTGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CCA 90 bp CCTCGGCCTCGTCCTCCGCGCTGTGGCTGGCCAGCAGGTCCCGGTTaGGCTCATACATATTATTTACAACGTCACCGTCACTTTTGGCTA +
Preference number: 5 (lower is better)
Translates to: PRPRPPRCGWPAGPG*AHTYYLQRHRHFWL
Trigger: TAGCCAAAAGTGACGGTGACGTTGTAAATAATATGTATGAGCCCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACGAGGCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS-3UTR CAA 90 bp CTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGCACCCGGCCAGCAGGTCCCGGTaGGGCTCATACATATTATTT +
Preference number: 5 (lower is better)
Translates to: LLSTPVYPFPSATPRGHPASRSR*GSYILF
Trigger: AAATAATATGTATGAGCCCAACCGGGACCTGCTGGC...CGGGTGCCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCCCACTGGCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACGCCAGCAGGTCCCGGTaGGGCTCATACATATTATTT +
Preference number: 5 (lower is better)
Translates to: CPLADSARQLRWLSLDGHASRSR*GSYILF
Trigger: AAATAATATGTATGAGCCCAACCGGGACCTGCTGGC...GTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGCCAGTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GCTTCCCAACGGACGACTAAGGACACACTCTGCAAATCTGAGCCCCAGAAGGGGCAGCCCCCGCCTGATTaGCATCCACGCAGAACTTCT +
Preference number: 5 (lower is better)
Translates to: ASQRTTKDTLCKSEPQKGQPPPD*HPRRTS
Trigger: AGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCTG...CCCCTTCTGGGGCTCAGATTTGCAGAGTGTGTCCTTAGTCGTCCGTTGGGAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS-3UTR CAA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTTGCACTCGTGGGCTaGGCCGCTGCCACCGCCAAG +
Preference number: 5 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRLALVG*AAATAK
Trigger: CTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGATCTGGCCACAGTCCTaGCACTTGATCTGCGTGCGG +
Preference number: 5 (lower is better)
Translates to: SLSFEHTSLSIPFRDPTRIWPQS*HLICVR
Trigger: CCGCACGCAGATCAAGTGCAAGGACTGTGGCCAGAT...CCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAATGGATGCGATGGCCTaGATGGAGTCCCCGGCGGCG +
Preference number: 5 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPMDAMA*MESPAA
Trigger: CGCCGCCGGGGACTCCATCAAGGCCATCGCATCCAT...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ATGTCCACACGTGACACAAACCCACACCAAGGCGGCTTGCACCACTCCTGTTTGGACTTTGGCTCGGCCTaGACCAGCAAGTTGTGGGCG +
Preference number: 5 (lower is better)
Translates to: MSTRDTNPHQGGLHHSCLDFGSA*TSKLWA
Trigger: CGCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGTC...CAAACAGGAGTGGTGCAAGCCGCCTTGGTGTGGGTTTGTGTCACGTGTGGACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GCTGATTCTGCGAGGCAGCTCCGTTGGCTGTCTTTGGACGGCCACCTGCATGGCTTGAAAGGCTTCTCCTaGTTGTGGATGTTCCGGACG +
Preference number: 5 (lower is better)
Translates to: ADSARQLRWLSLDGHLHGLKGFS*LWMFRT
Trigger: CGTCCGGAACATCCACAACAAGGAGAAGCCTTTCAA...GCCATGCAGGTGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCAGAATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCTTCTGTTCTCAAGCTGTGTCTCGCCAAGAACCCGCAGGAAGAGCGACGTGACTGCCCGAAGCAGCGGTaGCACAGGTGGCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: PSVLKLCLAKNPQEERRDCPKQR*HRWHLK
Trigger: TTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGGCA...GTCACGTCGCTCTTCCTGCGGGTTCTTGGCGAGACACAGCTTGAGAACAGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCGAGTGGGGAAGAAGTaGCGTCCCAAGAGAGGGAGG +
Preference number: 5 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLRVGKK*RPKRGR
Trigger: CCTCCCTCTCTTGGGACGCAACTTCTTCCCCACTCG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TTCGGCCGTCTGCATGGTTCACGGGTGTGGCCCCGCGCCTCTTGTTCTGCCTCGCCTTATCACACGGTTTaGGTCCTTCACCAGATACTT +
Preference number: 5 (lower is better)
Translates to: FGRLHGSRVWPRASCSASPYHTV*VLHQIL
Trigger: AAGTATCTGGTGAAGGACCAAAACCGTGTGATAAGG...CGAGGCAGAACAAGAGGCGCGGGGCCACACCCGTGAACCATGCAGACGGCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS-3UTR CAA 90 bp TCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGAAAGGGACAGCATCATaGCATATGCCTTCGGGTGTG +
Preference number: 5 (lower is better)
Translates to: SDVAPVTFNQASREPWEGKGTAS*HMPSGV
Trigger: CACACCCGAAGGCATATGCAATGATGCTGTCCCTTT...CCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGGCGAGCCCTCCTaGGGGGTGAAGTCCTCGCTG +
Preference number: 5 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLYGEPS*GVKSSL
Trigger: CAGCGAGGACTTCACCCCCAAGGAGGGCTCGCCGTA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGCAGCCCCCGCCTGATTaGCATCCACGCAGAACTTCT +
Preference number: 5 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLQPPPD*HPRRTS
Trigger: AGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCTG...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAACAGCCCCCGCCTGATTaGCATCCACGCAGAACTTCT +
Preference number: 5 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQQPPPD*HPRRTS
Trigger: AGAAGTTCTGCGTGGATGCAAATCAGGCGGGGGCTG...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGTCCAGGCTGTACTTGTaGGGGAACATCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: WTATCMAVTEQCSQDQSLSRLYL*GNIRSQ
Trigger: CTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGGA...CAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAATCCAGGCTGTACTTGTaGGGGAACATCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQSRLYL*GNIRSQ
Trigger: CTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGGA...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCCCCCGGCGGCGCCCGTaGCAGTCAGCAGCTGCTCGT +
Preference number: 5 (lower is better)
Translates to: HRSVILRGFFISTLRDKVPRRRP*QSAAAR
Trigger: ACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGGG...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGTTCACGTCTTTGGGCTaGGTGGTGAGATCAAAGGGG +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGFTSLG*VVRSKG
Trigger: CCCCTTTGATCTCACCACCAAGCCCAAAGACGTGAA...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTAGGTGTCTGGTGAGATaGGCTGATCTGGGGAAGATC +
Preference number: 5 (lower is better)
Translates to: PSEVVDGVKCSRLRRGSSRCLVR*ADLGKI
Trigger: GATCTTCCCCAGATCAGCCAATCTCACCAGACACCT...ACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGAGGTGTCTGGTGAGATaGGCTGATCTGGGGAAGATC +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGRCLVR*ADLGKI
Trigger: GATCTTCCCCAGATCAGCCAATCTCACCAGACACCT...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CCAGACTCCGACGTGGCTCCAGTGACCTTCAACCAAGCGTCCAGAGAACCCTGGTTGCACAGGTGGCACTaGAAAGGCTTCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PDSDVAPVTFNQASREPWLHRWH*KGFSLL
Trigger: CAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCAA...CCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCATGCGAGGCAGCTCCGTaGGCTGTCTTTGGACGGCCA +
Preference number: 5 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPCEAAP*AVFGRP
Trigger: TGGCCGTCCAAAGACAGCCAACGGAGCTGCCTCGCA...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ATGTCCACACGTGACACAAACCCACACCAAGGCGGCTTGCACCACTCCTGTTTGCAGGTGGGTCCTGTCTaGCCTCGTTGTGCAGATCTG +
Preference number: 5 (lower is better)
Translates to: MSTRDTNPHQGGLHHSCLQVGPV*PRCADL
Trigger: CAGATCTGCACAACGAGGCAAGACAGGACCCACCTG...CAAACAGGAGTGGTGCAAGCCGCCTTGGTGTGGGTTTGTGTCACGTGTGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCGAAGTCTGTCTCCTTaGCCGCCGCCCGGGGCACCA +
Preference number: 5 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFRSLSP*PPPGAP
Trigger: TGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTCG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTGCCCAGCCCGTCAGAGGTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTTCTCAAGACCAATCCTaGGAGATGGTGAGACTCTAC +
Preference number: 5 (lower is better)
Translates to: LPSPSEVVDGVKCSRLRRSQDQS*EMVRLY
Trigger: GTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGA...ACGTCGGAGTCTGGAGCATTTCACCCCATCAACCACCTCTGACGGGCTGGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TCGTCCATCCGGAGTCTCAGGCACAGGTGCGGCTTGGTGGCCCGGAGCGATCCGTCTACACAAGTACATTaGTGTTCATCACAAGCATCA +
Preference number: 5 (lower is better)
Translates to: SSIRSLRHRCGLVARSDPSTQVH*CSSQAS
Trigger: TGATGCTTGTGATGAACACAAATGTACTTGTGTAGA...CGGATCGCTCCGGGCCACCAAGCCGCACCTGTGCCTGAGACTCCGGATGGACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACGCCGCAGGTCCAGCTaGGACTGGAAGAGTTCGTCA +
Preference number: 5 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRRRRSS*DWKSSS
Trigger: TGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCG...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGGACACTGGTCGCATTaGTACTCGCGCTCCTCCGTG +
Preference number: 5 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLGHWSH*YSRSSV
Trigger: CACGGAGGAGCGCGAGTACAAATGCGACCAGTGTCC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAGTCCCCGTGGTGGTGTaGACGTCCTCAAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPVPVVV*TSSKSL
Trigger: CAGTGACTTTGAGGACGTCAACACCACCACGGGGAC...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GTGGTTGATGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTGACCTTCAAATGGGCTTCACGTCTTaGGGCTTGGTGGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: VVDGVKCSRLRRGSSDLQMGFTS*GLVVRS
Trigger: TGATCTCACCACCAAGCCCAAAGACGTGAAGCCCAT...TTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCATCAACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GGACGGCCACCTGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGTTGCACAGGTGGCACTaGAAAGGCTTCTCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: GRPPAWPSLNSVLKTNPWLHRWH*KGFSLL
Trigger: CAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCAA...CCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCAGGTGGCCGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TTGAGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCTCGTGCTCGTGCTTCTaGAGGTGCCGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LSDLSLLSTPVYPFPSATSCSCF*RCRSRL
Trigger: CAACCTGGACCGGCACCTCAAGAAGCACGAGCACGA...GGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCACGCGGGGTTTCTCTGTTCGCGTaGATGCTTGGTTCATCTCAC +
Preference number: 5 (lower is better)
Translates to: LSLLSTPVYPFPSATPRGVSLFA*MLGSSH
Trigger: GTGAGATGAACCAAGCATCAACGCGAACAGAGAAAC...CCCGCGTGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATGCCCGAAGCAGCGGTaGCACAGGTGGCACTTGAAA +
Preference number: 5 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRCPKQR*HRWHLK
Trigger: TTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGGCA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCAGGTGCCGGTCCAGGTaGGTCTGCTGCCCGAAGCAG +
Preference number: 5 (lower is better)
Translates to: HRSVILRGFFISTLRDKVRCRSR*VCCPKQ
Trigger: CTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCT...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp TCGCATCCCTGTCCATGCTGCACAGTTACATGGCCCCGTTACGGTGTGGTGACACAGGCAGACTCGGGTTaGCAAATGAGCTCAAATTTC +
Preference number: 5 (lower is better)
Translates to: SHPCPCCTVTWPRYGVVTQADSG*QMSSNF
Trigger: GAAATTTGAGCTCATTTGCAAACCCGAGTCTGCCTG...TGTCACCACACCGTAACGGGGCCATGTAACTGTGCAGCATGGACAGGGATGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTCACATTCGAAGCGTTaGCCGCTGTCGTGGGACATC +
Preference number: 5 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLSHSKR*PLSWDI
Trigger: GATGTCCCACGACAGCGGCAAACGCTTCGAATGTGA...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTCCACAGTCCTTGCACTaGATCTGCGTGCGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFPQSLH*ICVRQS
Trigger: CGACTGCCGCACGCAGATCAAGTGCAAGGACTGTGG...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTTCGTGCTCGTGCTTCTaGAGGTGCCGGTCCAGGTTG +
Preference number: 5 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFSCSCF*RCRSRL
Trigger: CAACCTGGACCGGCACCTCAAGAAGCACGAGCACGA...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CACATCTCTGCATGGCGGATCCAAGCCACAGGCCCTCGACTTCCCCATATAATTGCTCGATCCTCTGGGTaGAAGTCAGTGATATCTTGG +
Preference number: 5 (lower is better)
Translates to: HISAWRIQATGPRLPHIIARSSG*KSVISW
Trigger: CCAAGATATCACTGACTTCAACCCAGAGGATCGAGC...AATTATATGGGGAAGTCGAGGGCCTGTGGCTTGGATCCGCCATGCAGAGATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp GAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCTACGACTGCTTTGTCCCCGTGGTGGTGTaGACGTCCTCAAAGTCACTG +
Preference number: 5 (lower is better)
Translates to: EQCSQDQSLEMVRLYDCFVPVVV*TSSKSL
Trigger: CAGTGACTTTGAGGACGTCAACACCACCACGGGGAC...AAAGCAGTCGTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp AGTGATCTCTCTCTTTTGAGCACACCAGTCTATCCATTCCCTTCCGCGACCCCAAGAAGGCCTGAGCAGTaGTGTTTGCAGATCCTGGAT +
Preference number: 5 (lower is better)
Translates to: SDLSLLSTPVYPFPSATPRRPEQ*CLQILD
Trigger: ATCCAGGATCTGCAAACACAACTGCTCAGGCCTTCT...TGGGGTCGCGGAAGGGAATGGATAGACTGGTGTGCTCAAAAGAGAGAGATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS CCA 90 bp CAGGGGGTAGACGCCTTCCTTCACGTGCACCAGCAGCTCCTCACCTaGCTCAATGTCCTTAATGACTTTATAGTAAATCTGCTCACTGAT +
Preference number: 5 (lower is better)
Translates to: QGVDAFLHVHQQLLT*LNVLNDFIVNLLTD
Trigger: ATCAGTGAGCAGATTTACTATAAAGTCATTAAGGACATTGAGCCAGGTGAGGAGCTGCTGGTGCACGTGAAGGAAGGCGTCTACCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGAAGTCAGTGATATCTaGGGTCCCACTCATGAAGGG +
Preference number: 5 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLEVSDI*GPTHEG
Trigger: CCCTTCATGAGTGGGACCCAAGATATCACTGACTTC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACCTTGCACTCGTGGGCTaGGCCGCTGCCACCGCCAAG +
Preference number: 5 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYLALVG*AAATAK
Trigger: CTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAG...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGACTCGTTTCTCTGTTCGCGTaGATGCTTGGTTCATCTCAC +
Preference number: 5 (lower is better)
Translates to: MAVTEQCSQDQSLEMVRLVSLFA*MLGSSH
Trigger: GTGAGATGAACCAAGCATCAACGCGAACAGAGAAAC...GAGTCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp TGCATGGCCGTCACTGAACAGTGTTCTCAAGACCAATCCTTGGAGATGGTGAGATCTCAAGACCAATCCTaGGAGATGGTGAGACTCTAC +
Preference number: 5 (lower is better)
Translates to: CMAVTEQCSQDQSLEMVRSQDQS*EMVRLY
Trigger: GTAGAGTCTCACCATCTCCAAGGATTGGTCTTGAGA...TCTCACCATCTCCAAGGATTGGTCTTGAGAACACTGTTCAGTGACGGCCATGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp ACAAACACAAAAATGGAATGGAAGGAGCAGAGGAACTCTTCTAGGAAGAATGCATCCAGGCTGTACTTGTaGGGGAACATCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: TNTKMEWKEQRNSSRKNASRLYL*GNIRSQ
Trigger: CTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGGA...TGCATTCTTCCTAGAAGAGTTCCTCTGCTCCTTCCATTCCATTTTTGTGTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp ACAAACACAAAAATGGAATGGAAGGAGCAGAGGAACTCTTCTAGGAAGAATGCATGCTCCAGGCTGTACTaGTTGGGGAACATCCGCTCG +
Preference number: 5 (lower is better)
Translates to: TNTKMEWKEQRNSSRKNACSRLY*LGNIRS
Trigger: CGAGCGGATGTTCCCCAACAAGTACAGCCTGGAGCA...TGCATTCTTCCTAGAAGAGTTCCTCTGCTCCTTCCATTCCATTTTTGTGTTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp CACAGGTCTGTGATTCTGCGAGGATTCTTTATATCGACCTTAAGGGACAAAGTCTTTGGGGGATGGGGGTaGACAATCCAAGGAGTTAGC +
Preference number: 5 (lower is better)
Translates to: HRSVILRGFFISTLRDKVFGGWG*TIQGVS
Trigger: GCTAACTCCTTGGATTGTCAACCCCCATCCCCCAAA...GACTTTGTCCCTTAAGGTCGATATAAAGAATCCTCGCAGAATCACAGACCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270722.10
CDS-3UTR CAA 90 bp AGCCCCAGAAGGGGACGGAAAGACCGTCCTTCTATGCGCCTCAAGCCCAATTTTCTTCATTACTATAGTTaGCATCTCACAAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: SPRRGRKDRPSMRLKPNFLHYYS*HLTKAQ
Trigger: CTGTGCTTTTGTGAGATGCAAACTATAGTAATGAAG...AAAATTGGGCTTGAGGCGCATAGAAGGACGGTCTTTCCGTCCCCTTCTGGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000463591.1
CDS CCA 90 bp TCCACGATCTGCATGTCCGCCCGTTTCTCTGTTCGCGTTGATGCTTaGTTCATCTCACTATTGGCAATAAAGTTTCTGATTTCCGAGAAA +
Preference number: 5 (lower is better)
Translates to: STICMSARFSVRVDA*FISLLAIKFLISEK
Trigger: TTTCTCGGAAATCAGAAACTTTATTGCCAATAGTGAGATGAACCAAGCATCAACGCGAACAGAGAAACGGGCGGACATGCAGATCGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACATATGCTTGTGCTGCTaGAGGCCGGAGGACGTGGCG +
Preference number: 5 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYICLCC*RPEDVA
Trigger: CGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATAT...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS-3UTR CAA 90 bp CTGTCTATTTTTAAAACCACATGCTTAAATAGACTCTGCAGTCAATACGGTTACTTCCAGTTGAAGGCCTaGGGACACTGGTCGCATTTG +
Preference number: 5 (lower is better)
Translates to: LSIFKTTCLNRLCSQYGYFQLKA*GHWSHL
Trigger: CAAATGCGACCAGTGTCCCAAGGCCTTCAACTGGAA...GTAACCGTATTGACTGCAGAGTCTATTTAAGCATGTGGTTTTAAAAATAGACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS GCA 72 bp GCACGGGCCCGGCTGCCGATGCTCAGGTCCAGCGGCTaGTCCTCGCCGGATGCGGGGGCCGAGGGGCCCTTG +
Preference number: 6 (lower is better)
Translates to: ARARLPMLRSSG*SSPDAGAEGPL
Trigger: CAAGGGCCCCTCGGCCCCCGCATCCGGCGAGGAGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp CCCGCCCGCCGCCGTTTTGGCTGGCACGGGCCCGGCTaGCGATGCTCAGGTCCAGCGGCTGCTCCTCGCCGG +
Preference number: 6 (lower is better)
Translates to: PARRRFGWHGPG*RCSGPAAAPRR
Trigger: CCGGCGAGGAGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCGGGCGGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp CGCCGCCGTTTTGGCTGGCACGGGCCCGGCTGCCGATaGTCAGGTCCAGCGGCTGCTCCTCGCCGGATGCGG +
Preference number: 6 (lower is better)
Translates to: RRRFGWHGPGCR*SGPAAAPRRMR
Trigger: CCGCATCCGGCGAGGAGCAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp GGTTCTTGCGGGGCTCCCGCCCGCCGCCGTTTTGGCTaGCACGGGCCCGGCTGCCGATGCTCAGGTCCAGCG +
Preference number: 6 (lower is better)
Translates to: GSCGAPARRRFG*HGPGCRCSGPA
Trigger: CGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCGGGCGGGAGCCCCGCAAGAACC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp ACGTGGTTCTTGCGGGGCTCCCGCCCGCCGCCGTTTTaGCTGGCACGGGCCCGGCTGCCGATGCTCAGGTCC +
Preference number: 6 (lower is better)
Translates to: TWFLRGSRPPPF*LARARLPMLRS
Trigger: GGACCTGAGCATCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCGGGCGGGAGCCCCGCAAGAACCACGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp GACGTGGTTCTTGCGGGGCTCCCGCCCGCCGCCGTTTaGGCTGGCACGGGCCCGGCTGCCGATGCTCAGGTC +
Preference number: 6 (lower is better)
Translates to: DVVLAGLPPAAV*AGTGPAADAQV
Trigger: GACCTGAGCATCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCGGGCGGGAGCCCCGCAAGAACCACGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp TTCCCCATAGACGTGGTTCTTGCGGGGCTCCCGCCCGCCGCCGTTTaGGCTGGCACGGGCCCGGCTGCCGATGCTCAGGTCCAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: FPIDVVLAGLPPAAV*AGTGPAADAQVQRL
Trigger: CAGCCGCTGGACCTGAGCATCGGCAGCCGGGCCCGTGCCAGCCAAAACGGCGGCGGGCGGGAGCCCCGCAAGAACCACGTCTATGGGGAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp AACTTCTCCTCGGGCCCCGCAGCTGCCGTCGTGCCCTaGCTGCTGTTGCTGACGGCGGAGACCAGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: NFSSGPAAAVVP*LLLLTAETRGR
Trigger: CCTGCCCCTGGTCTCCGCCGTCAGCAACAGCAGCCAGGGCACGACGGCAGCTGCGGGGCCCGAGGAGAAGTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp CCTCGCCGGATGCGGGGGCCGAGGGGCCCTTGGGCATaGGCAGGATGGGCTTCACGTCTTTGGGCTTGGTGG +
Preference number: 6 (lower is better)
Translates to: PRRMRGPRGPWA*AGWASRLWAWW
Trigger: CCACCAAGCCCAAAGACGTGAAGCCCATCCTGCCCATGCCCAAGGGCCCCTCGGCCCCCGCATCCGGCGAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp GGGGGCGCCAAGCCGCCCCCAAACTTGGGCTGGCCCTCGGCGGACTaGCCCTTGCCCTTGTCCTTGTCAGGGTCGCTGTCCACGTCGCTG +
Preference number: 6 (lower is better)
Translates to: GGAKPPPNLGWPSAD*PLPLSLSGSLSTSL
Trigger: CAGCGACGTGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTTGGCGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp AGGTCCAGCGGCTGCTCCTCGCCGGATGCGGGGGCCGAGGGGCCCTaGGGCATGGGCAGGATGGGCTTCACGTCTTTGGGCTTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: RSSGCSSPDAGAEGP*GMGRMGFTSLGLVV
Trigger: CACCACCAAGCCCAAAGACGTGAAGCCCATCCTGCCCATGCCCAAGGGCCCCTCGGCCCCCGCATCCGGCGAGGAGCAGCCGCTGGACCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 72 bp GGCACTGGGGCCGCCCACCTTGAGGGCGTCCCGGGGTaGCTTTGGCTCGGCCTTGACCAGCAAGTTGTGGGC +
Preference number: 6 (lower is better)
Translates to: GTGAAHLEGVPG*LWLGLDQQVVG
Trigger: GCCCACAACTTGCTGGTCAAGGCCGAGCCAAAGTCACCCCGGGACGCCCTCAAGGTGGGCGGCCCCAGTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp GGAACGTGGGCTCCTCGTCCAGGCCGGGCGGCACTGTaGCCAGGGGGTAGACGCCTTCCTTCACGTGCACCA +
Preference number: 6 (lower is better)
Translates to: GTWAPRPGRAAL*PGGRRLPSRAP
Trigger: TGGTGCACGTGAAGGAAGGCGTCTACCCCCTGGGCACAGTGCCGCCCGGCCTGGACGAGGAGCCCACGTTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp GGGAACATCCGCTCGCAGTCCTTGCACTCGTGGGCTTaGCCGCTGCCACCGCCAAGGCCCTCGGGCTTGAGC +
Preference number: 6 (lower is better)
Translates to: GNIRSQSLHSWA*PLPPPRPSGLS
Trigger: GCTCAAGCCCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp GGGGAACATCCGCTCGCAGTCCTTGCACTCGTGGGCTaGGCCGCTGCCACCGCCAAGGCCCTCGGGCTTGAG +
Preference number: 6 (lower is better)
Translates to: GEHPLAVLALVG*AAATAKALGLE
Trigger: CTCAAGCCCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp CCGCCCCCAAACTTGGGCTGGCCCTCGGCGGACTTGCCCTTGCCCTaGTCCTTGTCAGGGTCGCTGTCCACGTCGCTGTCCAGGTCCGAG +
Preference number: 6 (lower is better)
Translates to: PPPNLGWPSADLPLP*SLSGSLSTSLSRSE
Trigger: CTCGGACCTGGACAGCGACGTGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp GCCAAGCCGCCCCCAAACTTGGGCTGGCCCTCGGCGGACTTGCCCTaGCCCTTGTCCTTGTCAGGGTCGCTGTCCACGTCGCTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: AKPPPNLGWPSADLP*PLSLSGSLSTSLSR
Trigger: CCTGGACAGCGACGTGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 72 bp GGAGCTTGGCGTCCTGGGTGTGGTTCAGGGGGCTCTTaGGCAGCGATGTGGGAGGTAGCAGAGGCGGCCGGG +
Preference number: 6 (lower is better)
Translates to: GAWRPGCGSGGS*AAMWEVAEAAG
Trigger: CCCGGCCGCCTCTGCTACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACCACACCCAGGACGCCAAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp TGCGATGGCCTTGATGGAGTCCCCGGCGGCGCCCGTTaGAGTCAGCAGCTGCTCGTCGGGTGGCGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: CDGLDGVPGGAR*SQQLLVGWREE
Trigger: TTCTTCCCGCCACCCGACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGGGACTCCATCAAGGCCATCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp TTGTTGGGGAACATCCGCTCGCAGTCCTTGCACTCGTaGGCTTGGCCGCTGCCACCGCCAAGGCCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: LLGNIRSQSLHS*AWPLPPPRPSG
Trigger: GCCCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp GGGAGCTTGGCGTCCTGGGTGTGGTTCAGGGGGCTCTaGAGCAGCGATGTGGGAGGTAGCAGAGGCGGCCGG +
Preference number: 6 (lower is better)
Translates to: GSLASWVWFRGL*SSDVGGSRGGR
Trigger: CCGGCCGCCTCTGCTACCTCCCACATCGCTGCTCAAGAGCCCCCTGAACCACACCCAGGACGCCAAGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp CTTCCACGTCCGTCAGTATTTGCTCCCATCCGAAGTCTGTCTCCTTaGCCGCCGCCCGGGGCACCACCACGCAGGGGCCCAGCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LPRPSVFAPIRSLSP*PPPGAPPRRGPASP
Trigger: GGGAGAGGCTGGGCCCCTGCGTGGTGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTCGGATGGGAGCAAATACTGACGGACGTGGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS CAA 90 bp TGCTGCTCCAGGCTGTACTTGTTGGGGAACATCCGCTCGCAGTCCTaGCACTCGTGGGCTTGGCCGCTGCCACCGCCAAGGCCCTCGGGC +
Preference number: 6 (lower is better)
Translates to: CCSRLYLLGNIRSQS*HSWAWPLPPPRPSG
Trigger: GCCCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAAGTACAGCCTGGAGCAGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp CCAAACTTGGGCTGGCCCTCGGCGGACTTGCCCTTGCCCTTGTCCTaGTCAGGGTCGCTGTCCACGTCGCTGTCCAGGTCCGAGCCCGTC +
Preference number: 6 (lower is better)
Translates to: PNLGWPSADLPLPLS*SGSLSTSLSRSEPV
Trigger: GACGGGCTCGGACCTGGACAGCGACGTGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp CGTCAGTATTTGCTCCCATCCGAAGTCTGTCTCCTTTaGCGCCGCCCGGGGCACCACCACGCAGGGGCCCAG +
Preference number: 6 (lower is better)
Translates to: RQYLLPSEVCLL*RRPGHHHAGAQ
Trigger: CTGGGCCCCTGCGTGGTGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTCGGATGGGAGCAAATACTGACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS GCA 72 bp AGCCGCCCCCAAACTTGGGCTGGCCCTCGGCGGACTTaGCCTTGCCCTTGTCCTTGTCAGGGTCGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: SRPQTWAGPRRT*PCPCPCQGRCP
Trigger: TGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp ATGGAGTCCCCGGCGGCGCCCGTTGCAGTCAGCAGCTaGTCGTCGGGTGGCGGGAAGAATGAGTGCTGGGAA +
Preference number: 6 (lower is better)
Translates to: MESPAAPVAVSS*SSGGGKNECWE
Trigger: TTCCCAGCACTCATTCTTCCCGCCACCCGACGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGGGACTCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp CCGTCAGTATTTGCTCCCATCCGAAGTCTGTCTCCTTaGCCGCCGCCCGGGGCACCACCACGCAGGGGCCCA +
Preference number: 6 (lower is better)
Translates to: PSVFAPIRSLSP*PPPGAPPRRGP
Trigger: TGGGCCCCTGCGTGGTGGTGCCCCGGGCGGCGGCAAAGGAGACAGACTTCGGATGGGAGCAAATACTGACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
CDS CAA 72 bp CCCCCAAACTTGGGCTGGCCCTCGGCGGACTTGCCCTaGCCCTTGTCCTTGTCAGGGTCGCTGTCCACGTCG +
Preference number: 6 (lower is better)
Translates to: PPNLGWPSADLP*PLSLSGSLSTS
Trigger: CGACGTGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp AAGCCGCCCCCAAACTTGGGCTGGCCCTCGGCGGACTaGCCCTTGCCCTTGTCCTTGTCAGGGTCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: KPPPNLGWPSAD*PLPLSLSGSLS
Trigger: GGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTTTGGGGGCGGCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp CCCCGTGCACAGCTTTGCCCCGCCGTGTCCCGGAGGTaGCTGGATCTCCCAGCTGCAGAGCCAAAGGCATCC +
Preference number: 6 (lower is better)
Translates to: PRAQLCPAVSRR*LDLPAAEPKAS
Trigger: GGATGCCTTTGGCTCTGCAGCTGGGAGATCCAGCAACCTCCGGGACACGGCGGGGCAAAGCTGTGCACGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000606170.1
CDS CAA 90 bp GTACTTGTTGGGGAACATCCGCTCGCAGTCCTTGCACTCGTGGGCTaGGCCGCTGCCACCGCCAAGGCCCTCGGGCTTGAGCTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: VLVGEHPLAVLALVG*AAATAKALGLELLS
Trigger: GCTGAGGAGCTCAAGCCCGAGGGCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAAGTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp GAGCCCGTCCCCGTGGTCGTGTCCAGGTCGGTCCCCGTGGTGGTGTaGACGTCCTCAAAGTCACTGCCGTCCGACATGTCGCTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: EPVPVVVSRSVPVVV*TSSKSLPSDMSLLL
Trigger: CAGGAGCAGCGACATGTCGGACGGCAGTGACTTTGAGGACGTCAACACCACCACGGGGACCGACCTGGACACGACCACGGGGACGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp ACCCCGGGGTGCTGGCTCACTGGTGCGTTCTCGTGCTCGTGCTTCTaGAGGTGCCGGTCCAGGTTGGTCTGCTGCCCGAAGCAGCGGTTG +
Preference number: 6 (lower is better)
Translates to: TPGCWLTGAFSCSCF*RCRSRLVCCPKQRL
Trigger: CAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAACGCACCAGTGAGCCAGCACCCCGGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS TCA 72 bp CTCCTCAGCCAGGCCCTCGTAGAGCGCAGCCCCCACTaGGCCACACGTGTACTTCTTATGGCGCCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: LLSQALVERSPH*ATRVLLMAPQV
Trigger: GACCTGCGGCGCCATAAGAAGTACACGTGTGGCTCAGTGGGGGCTGCGCTCTACGAGGGCCTGGCTGAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp GGCTGTACTTGTTGGGGAACATCCGCTCGCAGTCCTTaGACTCGTGGGCTTGGCCGCTGCCACCGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: GCTCWGTSARSP*TRGLGRCHRQG
Trigger: GCCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAAGTACAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp CCGGGGTGCTGGCTCACTGGTGCGTTCTCGTGCTCGTaGTTCTTGAGGTGCCGGTCCAGGTTGGTCTGCTGC +
Preference number: 6 (lower is better)
Translates to: PGCWLTGAFSCS*FLRCRSRLVCC
Trigger: GCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAACGCACCAGTGAGCCAGCACCCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS CAA 72 bp AACTTGGGCTGGCCCTCGGCGGACTTGCCCTTGCCCTaGTCCTTGTCAGGGTCGCTGTCCACGTCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: NLGWPSADLPLP*SLSGSLSTSLS
Trigger: GGACAGCGACGTGGACAGCGACCCTGACAAGGACAAGGGCAAGGGCAAGTCCGCCGAGGGCCAGCCCAAGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 72 bp CCGTGGTCGTGTCCAGGTCGGTCCCCGTGGTGGTGTTaGCGTCCTCAAAGTCACTGCCGTCCGACATGTCGC +
Preference number: 6 (lower is better)
Translates to: PWSCPGRSPWWC*RPQSHCRPTCR
Trigger: GCGACATGTCGGACGGCAGTGACTTTGAGGACGTCAACACCACCACGGGGACCGACCTGGACACGACCACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 72 bp GCTGGCTCACTGGTGCGTTCTCGTGCTCGTGCTTCTTaGGGTGCCGGTCCAGGTTGGTCTGCTGCCCGAAGC +
Preference number: 6 (lower is better)
Translates to: AGSLVRSRARAS*GAGPGWSAARS
Trigger: GCTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAACGCACCAGTGAGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS GCA 72 bp CTCACTGGTGCGTTCTCGTGCTCGTGCTTCTTGAGGTaGCGGTCCAGGTTGGTCTGCTGCCCGAAGCAGCGG +
Preference number: 6 (lower is better)
Translates to: LTGAFSCSCFLR*RSRLVCCPKQR
Trigger: CCGCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAACGCACCAGTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS CCA 72 bp ACGTCCTCCTGCTTCTCACTGGCTAGGCCTGGACACTaGGCACTGCCGTCCACGATCTGCATGTCCGCCCGT +
Preference number: 6 (lower is better)
Translates to: TSSCFSLARPGH*ALPSTICMSAR
Trigger: ACGGGCGGACATGCAGATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGGAGGACGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp AGGCTGTACTTGTTGGGGAACATCCGCTCGCAGTCCTaGCACTCGTGGGCTTGGCCGCTGCCACCGCCAAGG +
Preference number: 6 (lower is better)
Translates to: RLYLLGNIRSQS*HSWAWPLPPPR
Trigger: CCTTGGCGGTGGCAGCGGCCAAGCCCACGAGTGCAAGGACTGCGAGCGGATGTTCCCCAACAAGTACAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp CCCGTGGTCGTGTCCAGGTCGGTCCCCGTGGTGGTGTaGACGTCCTCAAAGTCACTGCCGTCCGACATGTCG +
Preference number: 6 (lower is better)
Translates to: PVVVSRSVPVVV*TSSKSLPSDMS
Trigger: CGACATGTCGGACGGCAGTGACTTTGAGGACGTCAACACCACCACGGGGACCGACCTGGACACGACCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp GGGCCAAAGTACTTCTCGGCAATGGATGCGATGGCCTaGATGGAGTCCCCGGCGGCGCCCGTTGCAGTCAGC +
Preference number: 6 (lower is better)
Translates to: GPKYFSAMDAMA*MESPAAPVAVS
Trigger: GCTGACTGCAACGGGCGCCGCCGGGGACTCCATCAAGGCCATCGCATCCATTGCCGAGAAGTACTTTGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp ATGAAGCCGGGGCCAAAGTACTTCTCGGCAATGGATGCGATGGCCTaGATGGAGTCCCCGGCGGCGCCCGTTGCAGTCAGCAGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: MKPGPKYFSAMDAMA*MESPAAPVAVSSCS
Trigger: CGAGCAGCTGCTGACTGCAACGGGCGCCGCCGGGGACTCCATCAAGGCCATCGCATCCATTGCCGAGAAGTACTTTGGCCCCGGCTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 72 bp GGCCAAAGTACTTCTCGGCAATGGATGCGATGGCCTTaGTGGAGTCCCCGGCGGCGCCCGTTGCAGTCAGCA +
Preference number: 6 (lower is better)
Translates to: GQSTSRQWMRWP*WSPRRRPLQSA
Trigger: TGCTGACTGCAACGGGCGCCGCCGGGGACTCCATCAAGGCCATCGCATCCATTGCCGAGAAGTACTTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp CCTGCTTCTCACTGGCTAGGCCTGGACACTGGGCACTaGCGTCCACGATCTGCATGTCCGCCCGTTTCTCTG +
Preference number: 6 (lower is better)
Translates to: PASHWLGLDTGH*RPRSACPPVSL
Trigger: CAGAGAAACGGGCGGACATGCAGATCGTGGACGGCAGTGCCCAGTGTCCAGGCCTAGCCAGTGAGAAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp AACCCTCTTTGGCCAATGAGAGAAGCCAGGCCGCTCTaGTTCCAGGGCCCCGAGCAGGGAACAGCACTGGGA +
Preference number: 6 (lower is better)
Translates to: NPLWPMREARPL*FQGPEQGTALG
Trigger: TCCCAGTGCTGTTCCCTGCTCGGGGCCCTGGAAGCAGAGCGGCCTGGCTTCTCTCATTGGCCAAAGAGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512462.5
CDS CCA 72 bp TGGCACTGTCCTCGGCCTCGTCCTCCGCGCTGTGGCTaGCCAGCAGGTCCCGGTTGGGCTCATACATATTAT +
Preference number: 6 (lower is better)
Translates to: WHCPRPRPPRCG*PAGPGWAHTYY
Trigger: ATAATATGTATGAGCCCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACGAGGCCGAGGACAGTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CCA 72 bp GGTCGCAGTACTTACACCCTCCTACTGTTCTGTGGCTaGCTGGTGGATCCCCCTGGAGTGTGCCCCGTGTCC +
Preference number: 6 (lower is better)
Translates to: GRSTYTLLLFCG*LVDPPGVCPVS
Trigger: GGACACGGGGCACACTCCAGGGGGATCCACCAGCCAGCCACAGAACAGTAGGAGGGTGTAAGTACTGCGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000378389.5
CDS CAA 72 bp TTCTCGTGCTCGTGCTTCTTGAGGTGCCGGTCCAGGTaGGTCTGCTGCCCGAAGCAGCGGTTGCACAGGTGG +
Preference number: 6 (lower is better)
Translates to: FSCSCFLRCRSR*VCCPKQRLHRW
Trigger: CCACCTGTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS CAA 72 bp TGCTGGCTCACTGGTGCGTTCTCGTGCTCGTGCTTCTaGAGGTGCCGGTCCAGGTTGGTCTGCTGCCCGAAG +
Preference number: 6 (lower is better)
Translates to: CWLTGAFSCSCF*RCRSRLVCCPK
Trigger: CTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAACGCACCAGTGAGCCAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS TCA 72 bp CCTTCCGCTTTTCTACCCTGCTGTAGATGGGGTCCATaGAGAAGGGCGAGGGCTTGGCGTAGTGGAGCGGGG +
Preference number: 6 (lower is better)
Translates to: PSAFLPCCRWGP*RRARAWRSGAG
Trigger: CCCCGCTCCACTACGCCAAGCCCTCGCCCTTCTTCATGGACCCCATCTACAGCAGGGTAGAAAAGCGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000512462.5
CDS CCA 72 bp CACCGTCACTTTTGGCTAGCTTCCTCGCCCTCGCCTTaGATCGCATGGTGTCGGCTCGCGGAATCTCTCTCC +
Preference number: 6 (lower is better)
Translates to: HRHFWLASSPSP*IAWCRLAESLS
Trigger: GGAGAGAGATTCCGCGAGCCGACACCATGCGATCCAAGGCGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CCA 72 bp AGCGCAGCCCCCACTGAGCCACACGTGTACTTCTTATaGCGCCGCAGGTCCAGCTTGGACTGGAAGAGTTCG +
Preference number: 6 (lower is better)
Translates to: SAAPTEPHVYFL*RRRSSLDWKSS
Trigger: CGAACTCTTCCAGTCCAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTGTGGCTCAGTGGGGGCTGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp GTCGGCATCGGCTCCAAAGCTAACAGACCGCCTTCGTaGTCCTCAGCACACCTTCGGGTGTGGTCAAAGCCC +
Preference number: 6 (lower is better)
Translates to: VGIGSKANRPPS*SSAHLRVWSKP
Trigger: GGGCTTTGACCACACCCGAAGGTGTGCTGAGGACCACGAAGGCGGTCTGTTAGCTTTGGAGCCGATGCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000512462.5
CDS CAA 90 bp CCCACTGAGCCACACGTGTACTTCTTATGGCGCCGCAGGTCCAGCTaGGACTGGAAGAGTTCGTCACACTCGTCACAGCGGAACGTGGGC +
Preference number: 6 (lower is better)
Translates to: PTEPHVYFLWRRRSS*DWKSSSHSSQRNVG
Trigger: GCCCACGTTCCGCTGTGACGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTGTGGCTCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp ACTGGTGCGTTCTCGTGCTCGTGCTTCTTGAGGTGCCGGTCCAGGTaGGTCTGCTGCCCGAAGCAGCGGTTGCACAGGTGGCACTTGAAA +
Preference number: 6 (lower is better)
Translates to: TGAFSCSCFLRCRSR*VCCPKQRLHRWHLK
Trigger: TTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGAGCACGAGAACGCACCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS TCA 72 bp AAGGCTTCACCGTGCTGTGGATATGCTTGTGCTGCTTaGGGCCGGAGGACGTGGCGAAGGTCTTCCCGCAGT +
Preference number: 6 (lower is better)
Translates to: KASPCCGYACAA*GRRTWRRSSRS
Trigger: ACTGCGGGAAGACCTTCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAGCACGGTGAAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 72 bp TGTTCCGGACGTGCCGCTGGAGGTTCGAAGAGATGCTaGAGGAGCGGTCGCAGTACTTACACCTGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: CSGRAAGGSKRC*RSGRSTYTWKG
Trigger: CCCCTTCCAGGTGTAAGTACTGCGACCGCTCCTTCAGCATCTCTTCGAACCTCCAGCGGCACGTCCGGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000606170.1
CDS GCA 72 bp TCGTGCTTCTTGAGGTGCCGGTCCAGGTTGGTCTGCTaGCCGAAGCAGCGGTTGCACAGGTGGCACTTGAAA +
Preference number: 6 (lower is better)
Translates to: SCFLRCRSRLVC*PKQRLHRWHLK
Trigger: TTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCGGCACCTCAAGAAGCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS CCA 72 bp TTTTGGCTAGCTTCCTCGCCCTCGCCTTGGATCGCATaGTGTCGGCTCGCGGAATCTCTCTCCTCCTCCTTG +
Preference number: 6 (lower is better)
Translates to: FWLASSPSPWIA*CRLAESLSSSL
Trigger: CAAGGAGGAGGAGAGAGATTCCGCGAGCCGACACCATGCGATCCAAGGCGAGGGCGAGGAAGCTAGCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CAA 72 bp TCACCGTCACTTTTGGCTAGCTTCCTCGCCCTCGCCTaGGATCGCATGGTGTCGGCTCGCGGAATCTCTCTC +
Preference number: 6 (lower is better)
Translates to: SPSLLASFLALA*DRMVSARGISL
Trigger: GAGAGAGATTCCGCGAGCCGACACCATGCGATCCAAGGCGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CAA 72 bp AAAGGCTTCACCGTGCTGTGGATATGCTTGTGCTGCTaGAGGCCGGAGGACGTGGCGAAGGTCTTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: KGFTVLWICLCC*RPEDVAKVFPQ
Trigger: CTGCGGGAAGACCTTCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAGCACGGTGAAGCCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp TGCCGGTCCAGGTTGGTCTGCTGCCCGAAGCAGCGGTaGCACAGGTGGCACTTGAAAGGCTTCTCCTTGTTG +
Preference number: 6 (lower is better)
Translates to: CRSRLVCCPKQR*HRWHLKGFSLL
Trigger: CAACAAGGAGAAGCCTTTCAAGTGCCACCTGTGCAACCGCTGCTTCGGGCAGCAGACCAACCTGGACCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
ENST00000606170.1
CDS CAA 90 bp TCCTCGGCCTCGTCCTCCGCGCTGTGGCTGGCCAGCAGGTCCCGGTaGGGCTCATACATATTATTTACAACGTCACCGTCACTTTTGGCT +
Preference number: 6 (lower is better)
Translates to: SSASSSALWLASRSR*GSYILFTTSPSLLA
Trigger: AGCCAAAAGTGACGGTGACGTTGTAAATAATATGTATGAGCCCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACGAGGCCGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS TCA 72 bp TGTTCCGGACGTGCCGCTGGAGGTTCGAAGAGATGCTaGAGGAGCGGTCGCAGTACTTACACCTGTACGGCT +
Preference number: 6 (lower is better)
Translates to: CSGRAAGGSKRC*RSGRSTYTCTA
Trigger: AGCCGTACAGGTGTAAGTACTGCGACCGCTCCTTCAGCATCTCTTCGAACCTCCAGCGGCACGTCCGGAACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 72 bp TGTTCCGGACGTGCCGCTGGAGGTTCGAAGAGATGCTaGAGGAGCGGTCGCAGTACTTACACCCTCCTACTG +
Preference number: 6 (lower is better)
Translates to: CSGRAAGGSKRC*RSGRSTYTLLL
Trigger: CAGTAGGAGGGTGTAAGTACTGCGACCGCTCCTTCAGCATCTCTTCGAACCTCCAGCGGCACGTCCGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000378389.5
CDS GCA 72 bp ATGAAAGGCTTCACCGTGCTGTGGATATGCTTGTGCTaGTTGAGGCCGGAGGACGTGGCGAAGGTCTTCCCG +
Preference number: 6 (lower is better)
Translates to: MKGFTVLWICLC*LRPEDVAKVFP
Trigger: CGGGAAGACCTTCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAGCACGGTGAAGCCTTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp CGTCCTCCGCGCTGTGGCTGGCCAGCAGGTCCCGGTTaGGCTCATACATATTATTTACAACGTCACCGTCAC +
Preference number: 6 (lower is better)
Translates to: RPPRCGWPAGPG*AHTYYLQRHRH
Trigger: GTGACGGTGACGTTGTAAATAATATGTATGAGCCCAACCGGGACCTGCTGGCCAGCCACAGCGCGGAGGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CCA 72 bp CCCTGGGATGGAGGACTCTCGGAGCTCGAAGTCTGCTaGGATCGGAATGTCTTCAGGAATGTAGACAGGGGC +
Preference number: 6 (lower is better)
Translates to: PWDGGLSELEVC*DRNVFRNVDRG
Trigger: GCCCCTGTCTACATTCCTGAAGACATTCCGATCCCAGCAGACTTCGAGCTCCGAGAGTCCTCCATCCCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS CAA 72 bp CCACACGTGTACTTCTTATGGCGCCGCAGGTCCAGCTaGGACTGGAAGAGTTCGTCACACTCGTCACAGCGG +
Preference number: 6 (lower is better)
Translates to: PHVYFLWRRRSS*DWKSSSHSSQR
Trigger: CCGCTGTGACGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 90 bp TTTACAACGTCACCGTCACTTTTGGCTAGCTTCCTCGCCCTCGCCTaGGATCGCATGGTGTCGGCTCGCGGAATCTCTCTCCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: FTTSPSLLASFLALA*DRMVSARGISLLLL
Trigger: AAGGAGGAGGAGAGAGATTCCGCGAGCCGACACCATGCGATCCAAGGCGAGGGCGAGGAAGCTAGCCAAAAGTGACGGTGACGTTGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS TCA 72 bp TGGGGTGAAATGCTCCAGACTCCGACGTGGCTCCAGTaGCCTTCAACCAAGCGTCCAGAGAACCCTGGTTCT +
Preference number: 6 (lower is better)
Translates to: WGEMLQTPTWLQ*PSTKRPENPGS
Trigger: AGAACCAGGGTTCTCTGGACGCTTGGTTGAAGGTCACTGGAGCCACGTCGGAGTCTGGAGCATTTCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000378391.6
CDS GCA 72 bp AGCCCCTGGGATGGAGGACTCTCGGAGCTCGAAGTCTaGTGGGATCGGAATGTCTTCAGGAATGTAGACAGG +
Preference number: 6 (lower is better)
Translates to: SPWDGGLSELEV*WDRNVFRNVDR
Trigger: CCTGTCTACATTCCTGAAGACATTCCGATCCCAGCAGACTTCGAGCTCCGAGAGTCCTCCATCCCAGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000514189.5
ENST00000607632.1
CDS GCA 72 bp CATTTGTACTCGCGCTCCTCCGTGTGGATGACCATGTaGTGCTCCAGGCTGTACTTGTTGGGGAACATCCGC +
Preference number: 6 (lower is better)
Translates to: HLYSRSSVWMTM*CSRLYLLGNIR
Trigger: GCGGATGTTCCCCAACAAGTACAGCCTGGAGCAGCACATGGTCATCCACACGGAGGAGCGCGAGTACAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp CCCAGGTCTTCGGAGATCTTTGTGATGCAGCCTTCCTaGGGCGACACTTCCACGTCCGTCAGTATTTGCTCC +
Preference number: 6 (lower is better)
Translates to: PRSSEIFVMQPS*GDTSTSVSICS
Trigger: GGAGCAAATACTGACGGACGTGGAAGTGTCGCCCCAGGAAGGCTGCATCACAAAGATCTCCGAAGACCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270722.10
ENST00000378391.6
CDS CCA 72 bp GTGTACTTCTTATGGCGCCGCAGGTCCAGCTTGGACTaGAAGAGTTCGTCACACTCGTCACAGCGGAACGTG +
Preference number: 6 (lower is better)
Translates to: VYFLWRRRSSLD*KSSSHSSQRNV
Trigger: CACGTTCCGCTGTGACGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCGCCATAAGAAGTACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp CACACGTGTACTTCTTATGGCGCCGCAGGTCCAGCTTaGACTGGAAGAGTTCGTCACACTCGTCACAGCGGA +
Preference number: 6 (lower is better)
Translates to: HTCTSYGAAGPA*TGRVRHTRHSG
Trigger: TCCGCTGTGACGAGTGTGACGAACTCTTCCAGTCCAAGCTGGACCTGCGGCGCCATAAGAAGTACACGTGTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp CATATGAAAGGCTTCACCGTGCTGTGGATATGCTTGTaGTGCTTGAGGCCGGAGGACGTGGCGAAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: HMKGFTVLWICL*CLRPEDVAKVF
Trigger: GAAGACCTTCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAGCACGGTGAAGCCTTTCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS GCA 72 bp ACCTCACATATGAAAGGCTTCACCGTGCTGTGGATATaGTTGTGCTGCTTGAGGCCGGAGGACGTGGCGAAG +
Preference number: 6 (lower is better)
Translates to: TSHMKGFTVLWI*LCCLRPEDVAK
Trigger: CTTCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAGCACGGTGAAGCCTTTCATATGTGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp TTCAACCAAGCGTCCAGAGAACCCTGGGAGGGGGTGTaGAGAGGAGTGTCTTCGGAAAGGGACAGCATCATT +
Preference number: 6 (lower is better)
Translates to: FNQASREPWEGV*RGVSSERDSII
Trigger: AATGATGCTGTCCCTTTCCGAAGACACTCCTCTCCACACCCCCTCCCAGGGTTCTCTGGACGCTTGGTTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp CCCAGGTCTTCGGAGATCTTTGTGATGCAGCCTTCCTaGGGCGACACTTCCACGTCCGTCAGTATTTGCTTC +
Preference number: 6 (lower is better)
Translates to: PRSSEIFVMQPS*GDTSTSVSICF
Trigger: GAAGCAAATACTGACGGACGTGGAAGTGTCGCCCCAGGAAGGCTGCATCACAAAGATCTCCGAAGACCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512462.5
CDS CAA 72 bp TCACATATGAAAGGCTTCACCGTGCTGTGGATATGCTaGTGCTGCTTGAGGCCGGAGGACGTGGCGAAGGTC +
Preference number: 6 (lower is better)
Translates to: SHMKGFTVLWIC*CCLRPEDVAKV
Trigger: GACCTTCGCCACGTCCTCCGGCCTCAAGCAGCACAAGCATATCCACAGCACGGTGAAGCCTTTCATATGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CAA 72 bp GCATGGTGTCGGCTCGCGGAATCTCTCTCCTCCTCCTaGAGTCCAGAAGCAGCCACACACTATCTTCATCTC +
Preference number: 6 (lower is better)
Translates to: AWCRLAESLSSS*SPEAATHYLHL
Trigger: GAGATGAAGATAGTGTGTGGCTGCTTCTGGACTCAAGGAGGAGGAGAGAGATTCCGCGAGCCGACACCATGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000511072.5
ENST00000607632.1
CDS GCA 72 bp ATTAAGCACATCTTTAACTTCAAATGCTTCCTCAGCTaGTCTGCGGAGGTCCAGCCCCTTCCCAAAAGTCGG +
Preference number: 6 (lower is better)
Translates to: IKHIFNFKCFLS*SAEVQPLPKSR
Trigger: CCGACTTTTGGGAAGGGGCTGGACCTCCGCAGAGCAGCTGAGGAAGCATTTGAAGTTAAAGATGTGCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000509860.1
ENST00000512462.5
CDS CCA 72 bp GACGCCTTCCTTCACGTGCACCAGCAGCTCCTCACCTaGCTCAATGTCCTTAATGACTTTATAGTAAATCTG +
Preference number: 6 (lower is better)
Translates to: DAFLHVHQQLLT*LNVLNDFIVNL
Trigger: CAGATTTACTATAAAGTCATTAAGGACATTGAGCCAGGTGAGGAGCTGCTGGTGCACGTGAAGGAAGGCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000270722.10
ENST00000378391.6
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS TCA 72 bp CACGATCTGCATGTCCGCCCGTTTCTCTGTTCGCGTTaGTGCTTGGTTCATCTCACTATTGGCAATAAAGTT +
Preference number: 6 (lower is better)
Translates to: HDLHVRPFLCSR*CLVHLTIGNKV
Trigger: AACTTTATTGCCAATAGTGAGATGAACCAAGCATCAACGCGAACAGAGAAACGGGCGGACATGCAGATCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5
CDS CCA 72 bp TGCATGTCCGCCCGTTTCTCTGTTCGCGTTGATGCTTaGTTCATCTCACTATTGGCAATAAAGTTTCTGATT +
Preference number: 6 (lower is better)
Translates to: CMSARFSVRVDA*FISLLAIKFLI
Trigger: AATCAGAAACTTTATTGCCAATAGTGAGATGAACCAAGCATCAACGCGAACAGAGAAACGGGCGGACATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000270722.10
ENST00000378389.5
ENST00000378391.6
ENST00000509860.1
ENST00000511072.5
ENST00000512462.5
ENST00000514189.5