RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDM15 (Homo sapiens)

Ensembl gene IDs: ENSG00000141956

Ensembl transcript IDs: ENST00000269844.5, ENST00000398548.6, ENST00000422911.6, ENST00000441787.5, ENST00000447016.6, ENST00000449395.6, ENST00000465955.1, ENST00000470586.5, ENST00000477633.1, ENST00000486812.5, ENST00000489661.5, ENST00000491486.5, ENST00000495217.1, ENST00000496124.1

Found 2159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCTGCTGCTGCTCCGCCTGCACCTGGGGCTGGGCCGCCTGCTGTaGGGGTGCCTGCGGCTGCGAGGGTGGCAAGACGTCAGTCTGGGG +
Preference number: 1 (lower is better)
Translates to: LLLLLRLHLGLGRLL*GCLRLRGWQDVSLG
Trigger: CCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAGGCACCCCCACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCAGCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp GGGTGCCTGCGGCTGCGAGGGTGGCAAGACGTCAGTCTGGGGCACTaGCCGCCACGTGAGCGGGTGCTGGTCACTAAGCTGGCTCCCCAG +
Preference number: 1 (lower is better)
Translates to: GCLRLRGWQDVSLGH*PPRERVLVTKLAPQ
Trigger: CTGGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAGGCACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp GCACCTCGGGGTGCTTGCGCCGCATGTGTCGGCTCATGGAGGCCCTaGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCA +
Preference number: 1 (lower is better)
Translates to: APRGACAACVGSWRP*WTPWSRTAGSSAPP
Trigger: TGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp TGCTGTGGGGGTGCCTGCGGCTGCGAGGGTGGCAAGACGTCAGTCTaGGGCACTGCCCGCCACGTGAGCGGGTGCTGGTCACTAAGCTGG +
Preference number: 1 (lower is better)
Translates to: CCGGACGCEGGKTSV*GTARHVSGCWSLSW
Trigger: CCAGCTTAGTGACCAGCACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAGGCACCCCCACAGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp TCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATGTGTCGGCTCATaGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCT +
Preference number: 1 (lower is better)
Translates to: SPRAPRGACAACVGS*RPWWTPWSRTAGSS
Trigger: AGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp GCTTGCGCCGCATGTGTCGGCTCATGGAGGCCCTGGTGGACACCTTaGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTG +
Preference number: 1 (lower is better)
Translates to: ACAACVGSWRPWWTP*SRTAGSSAPPPCRV
Trigger: CACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCGGCGCAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp ACGATGCCAATGGAGGAGGCGTCGATGGTGGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTG +
Preference number: 1 (lower is better)
Translates to: TMPMEEASMVVVSGR*SRSSILTASTSGCL
Trigger: CAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp TACAGGAGGTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATaGCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGT +
Preference number: 1 (lower is better)
Translates to: YRRSAFHAGPSSAVP*RTQRGGTWHRTFSC
Trigger: ACAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGACCTCCTGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR CCA 90 bp TCAGCTCAGGCTGGACGATGCCAATGGAGGAGGCGTCGATGGTGGTaGTCTCCGGGAGGTGGTCCAGGTCATCGATCCTCACCGCGAGCA +
Preference number: 1 (lower is better)
Translates to: SAQAGRCQWRRRRWW*SPGGGPGHRSSPRA
Trigger: TGCTCGCGGTGAGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp GAGTCAGCTCAGGCTGGACGATGCCAATGGAGGAGGCGTCGATGGTaGTGGTCTCCGGGAGGTGGTCCAGGTCATCGATCCTCACCGCGA +
Preference number: 1 (lower is better)
Translates to: ESAQAGRCQWRRRRW*WSPGGGPGHRSSPR
Trigger: TCGCGGTGAGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGCTGACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp CCAGAGTCAGCTCAGGCTGGACGATGCCAATGGAGGAGGCGTCGATaGTGGTGGTCTCCGGGAGGTGGTCCAGGTCATCGATCCTCACCG +
Preference number: 1 (lower is better)
Translates to: PESAQAGRCQWRRRR*WWSPGGGPGHRSSP
Trigger: CGGTGAGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGCTGACTCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp CCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACTCCTTaGTGCCCTTGTGCAGCTTCATGTGGTGGCGCAGCGCGTGCTTGG +
Preference number: 1 (lower is better)
Translates to: PSARTCGGTPCTRTP*CPCAASCGGAARAW
Trigger: CCAAGCACGCGCTGCGCCACCACATGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp CGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTTACTGCCTTGGTAAGGCATGGTGTG +
Preference number: 1 (lower is better)
Translates to: RTLCRANTGSVRGGR*GPGPGLTALVRHGV
Trigger: CACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 90 bp GAGCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATaGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGA +
Preference number: 1 (lower is better)
Translates to: EQLYLWPPRKTHTSG*HSSPQLHGATGPKR
Trigger: TCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp GCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTaGCTTCTGCTTTCTCTTGTGACTTCGCTTGGCAGCTTTCCCGTG +
Preference number: 1 (lower is better)
Translates to: AEGGVLGHRSTRLLF*LLLSLVTSLGSFPV
Trigger: CACGGGAAAGCTGCCAAGCGAAGTCACAAGAGAAAGCAGAAGCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp CCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATGAAATaGGCCACAGACTGTGGGTTCGAGGCTTCCGGCTGGGGGTGGATC +
Preference number: 1 (lower is better)
Translates to: PRGVMELTRVVRLMK*ATDCGFEASGWGWI
Trigger: GATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp CGCCTTTGGATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTaGCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACA +
Preference number: 1 (lower is better)
Translates to: RLWMPQMGTIEVQEV*LPRRTLQRSPMPDT
Trigger: TGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATCCAAAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 90 bp GGCACAGAACGTTTTCCTGTGGCCTCCCCGCAAGACTCACACCAGTaGATGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAA +
Preference number: 1 (lower is better)
Translates to: GTERFPVASPQDSHQ*MALESTAARSHGSK
Trigger: TTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGAAAACGTTCTGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR TCA 90 bp GGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGGTGGCCTTCAGTGCAAAGCGCCGGT +
Preference number: 1 (lower is better)
Translates to: GCTSARWGPAGFHGG*PCGRGRWPSVQSAG
Trigger: ACCGGCGCTTTGCACTGAAGGCCACCTACCACGCCCACATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp ATTGGTCTCGTCGCCTACACTGCCTGTGAACTCCGTCTCTTTCTCTaGGTATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGC +
Preference number: 1 (lower is better)
Translates to: IGLVAYTACELRLFL*VFAEGGVLGHRSTR
Trigger: GCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGAAAGAGACGGAGTTCACAGGCAGTGTAGGCGACGAGACCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp TTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGACTTAC +
Preference number: 1 (lower is better)
Translates to: FSLSFTFPNPVSGEH*FCKGRQMRPRPRTY
Trigger: GTAAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 90 bp CTTCTCAACCCACAGACCAGGATTCACGGGGAGCAGCTGTACCTGTaGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCA +
Preference number: 1 (lower is better)
Translates to: LLNPQTRIHGEQLYL*PPRKTHTSGWHSSP
Trigger: TGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGCTCCCCGTGAATCCTGGTCTGTGGGTTGAGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp CACTCCTCACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTaGAGGGTGGACAGGGACAGATGGTCCTACAGTGCACATGACTTT +
Preference number: 1 (lower is better)
Translates to: HSSHTAARPSASGQL*RVDRDRWSYSAHDF
Trigger: AAAGTCATGTGCACTGTAGGACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGTGAGGAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR TCA 90 bp CCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATGTACTCGGTCACGTACTTCTTGTCG +
Preference number: 1 (lower is better)
Translates to: PHSWQLCASTLSCVS*TCFCSMYSVTYFLS
Trigger: CGACAAGAAGTACGTGACCGAGTACATGCTGCAGAAGCACGTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp TGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTaGGCTGAACGTGCTTCTGCAGCATGTACTCGGTCACGTACTTCT +
Preference number: 1 (lower is better)
Translates to: WSRTAGSSAPPPCRV*AERASAACTRSRTS
Trigger: AGAAGTACGTGACCGAGTACATGCTGCAGAAGCACGTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp CTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGT +
Preference number: 1 (lower is better)
Translates to: LPARLTPVDGTRVHS*TEPRVQNEFSTEMG
Trigger: ACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 90 bp AACCTGCGGTGGCACTCCTTGCACTCGTACTCCTTGATGCCCTTGTaGAGCTTCATGTGGTGGCGCAGCGCGTGCTTGGTCTTCATGCCT +
Preference number: 1 (lower is better)
Translates to: NLRWHSLHSYSLMPL*SFMWWRSACLVFMP
Trigger: AGGCATGAAGACCAAGCACGCGCTGCGCCACCACATGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp ACGGTATCAAAGGTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTaGCGTTCAGGGGTGGTAAGGTGCCCCACGGCCACCGGCTGGAGA +
Preference number: 1 (lower is better)
Translates to: TVSKVTVRIELSSCN*RSGVVRCPTATGWR
Trigger: TCTCCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGACCTTTGATACCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp TGTGGGTTCGAGGCTTCCGGCTGGGGGTGGATCTGGACGTCATTTTaGCGGTTGTGCAACATGGCAGAGCCGCTGACGGTATCAAAGGTC +
Preference number: 1 (lower is better)
Translates to: CGFEASGWGWIWTSF*RLCNMAEPLTVSKV
Trigger: GACCTTTGATACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp ATGAAATGGGCCACAGACTGTGGGTTCGAGGCTTCCGGCTGGGGGTaGATCTGGACGTCATTTTGGCGGTTGTGCAACATGGCAGAGCCG +
Preference number: 1 (lower is better)
Translates to: MKWATDCGFEASGWG*IWTSFWRLCNMAEP
Trigger: CGGCTCTGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp ACTTGCGCCCGCAGATCTCGCAGGTGTACTTCTTGTCGCCGTGGGTaGGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACCTTGC +
Preference number: 1 (lower is better)
Translates to: TCARRSRRCTSCRRG*AGACSYCSGRRTPC
Trigger: GCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGAGATCTGCGGGCGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp TTCCCCCGGCCGAAGGTGAGCTGGCACCGCTTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTCTCGTCAGAATTGTCATCGTTTTCT +
Preference number: 1 (lower is better)
Translates to: FPRPKVSWHRLQLYL*GSESALSSELSSFS
Trigger: AGAAAACGATGACAATTCTGACGAGAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp CCGCAGATCTCGCAGGTGTACTTCTTGTCGCCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACC +
Preference number: 1 (lower is better)
Translates to: PQISQVYFLSPWVSR*LFILLRQENTLPHT
Trigger: GGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGAGATCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp GTTTTCACGGTGGATGACCATGTGGGCGTGGTAGGTGGCCTTCAGTaGAAAGCGCCGGTTGCAGATGCTGCAGCCATAGCCCTTCTCCTT +
Preference number: 1 (lower is better)
Translates to: VFTVDDHVGVVGGLQ*KAPVADAAAIALLL
Trigger: AAGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTACCACGCCCACATGGTCATCCACCGTGAAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp TCCTTGCACTCGTACTCCTTGATGCCCTTGTGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTCTTCATGCCTTTCCCACACTCGGCA +
Preference number: 1 (lower is better)
Translates to: SLHSYSLMPLCSFMW*RSACLVFMPFPHSA
Trigger: TGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCACATGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp GGAGTTGACCAGGGTCGTCAGGTTGATGAAATGGGCCACAGACTGTaGGTTCGAGGCTTCCGGCTGGGGGTGGATCTGGACGTCATTTTG +
Preference number: 1 (lower is better)
Translates to: GVDQGRQVDEMGHRL*VRGFRLGVDLDVIL
Trigger: CAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTGGTCAACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp GGTGAGCTGGCACCGCTTGCAGCTGTACTTGTGAGGCTCCGAGTCTaGGCTCTCGTCAGAATTGTCATCGTTTTCTTCCGAGGAGATCCC +
Preference number: 1 (lower is better)
Translates to: GELAPLAAVLVRLRV*ALVRIVIVFFRGDP
Trigger: GGGATCTCCTCGGAAGAAAACGATGACAATTCTGACGAGAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAAGCGGTGCCAGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp ATGCCTTTCCCACACTCGGCACACAGGTACTCGCGGACATTGTCGTaGACACGCATGTGCTCCTTCAGCATGTCCTTCCTGGCAAAGGAC +
Preference number: 1 (lower is better)
Translates to: MPFPHSAHRYSRTLS*TRMCSFSMSFLAKD
Trigger: GTCCTTTGCCAGGAAGGACATGCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGAGTGTGGGAAAGGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp TTAATCCCCGTGTGCCGCTTGCAGTGCTTGAGCATGTTGACCTTCTaGGCGAACCTGCGGTGGCACTCCTTGCACTCGTACTCCTTGATG +
Preference number: 1 (lower is better)
Translates to: LIPVCRLQCLSMLTF*ANLRWHSLHSYSLM
Trigger: CATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCACACGGGGATTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp TTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTaGATTGCAGAGAATCCTGAGACAACCCGGAGGAGCCCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: FHSGFWLGFSQNGYI*IAENPETTRRSPWG
Trigger: CCCCCAGGGGCTCCTCCGGGTTGTCTCAGGATTCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 90 bp AAGAACTTGCGCCCGCAGATCTCGCAGGTGTACTTCTTGTCGCCGTaGGTGAGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACC +
Preference number: 1 (lower is better)
Translates to: KNLRPQISQVYFLSP*VSRCLFILLRQENT
Trigger: GGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGAGATCTGCGGGCGCAAGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp AGGTTGATGAAATGGGCCACAGACTGTGGGTTCGAGGCTTCCGGCTaGGGGTGGATCTGGACGTCATTTTGGCGGTTGTGCAACATGGCA +
Preference number: 1 (lower is better)
Translates to: RLMKWATDCGFEASG*GWIWTSFWRLCNMA
Trigger: TGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATaGGTCCACAGAGCCTGGTGGCCACAATGGCTGGATCTAATGTCT +
Preference number: 1 (lower is better)
Translates to: TAARSHGSKTNSPLR*VHRAWWPQWLDLMS
Trigger: AGACATTAGATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR TCA 90 bp AATCCAATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATaGGCCTTCCGCCTTTGGATGCCACAAATGGGAACGATAGAGGTA +
Preference number: 1 (lower is better)
Translates to: NPMGKPKTPPLVGKP*AFRLWMPQMGTIEV
Trigger: TACCTCTATCGTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATTGGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR TCA 90 bp GGATCTGGACGTCATTTTGGCGGTTGTGCAACATGGCAGAGCCGCTaGCGGTATCAAAGGTCACGGTCAGGATTGAGTTGTCCAGCTGTA +
Preference number: 1 (lower is better)
Translates to: GSGRHFGGCATWQSR*RYQRSRSGLSCPAV
Trigger: TACAGCTGGACAACTCAATCCTGACCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp CAGTTTAAAACTCTGGCCTGCCAGAGGTCCCTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCTGGCGGGGGATCTGGAGATACTCTG +
Preference number: 1 (lower is better)
Translates to: QFKTLACQRSLLELS*QTVMVAGGGSGDTL
Trigger: CAGAGTATCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 90 bp CTGCCAGAGGTCCCTTCTAGAGTTAAGCTGACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCT +
Preference number: 1 (lower is better)
Translates to: LPEVPSRVKLTDRNG*WRGIWRYSAKLSQP
Trigger: AGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAGGGACCTCTGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 90 bp CTTGCACATGATGACCGTGATGACCTCGAAGGTTGCAGGATCAGGTaGGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTATAAGA +
Preference number: 1 (lower is better)
Translates to: LAHDDRDDLEGCRIR*GSARLMVSAHSCIR
Trigger: TCTTATACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATCACGGTCATCATGTGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 90 bp TCTTCCGAGGAGATCCCGATCTTGCCGATAAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATGTCCTTGAAGTGGACATGGATGTGG +
Preference number: 1 (lower is better)
Translates to: SSEEIPILPINSSLW*SSINAMSLKWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp CAGCAAACACATCTAAACAAATCCCAAACATCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACGCAGCTCAGTAGCTGTACATCTGCT +
Preference number: 1 (lower is better)
Translates to: QQTHLNKSQTSLCSS*PESPGTQLSSCTSA
Trigger: AGCAGATGTACAGCTACTGAGCTGCGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGATGTTTGGGATTTGTTTAGATGTGTTTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp CCAGAGGTCCCTTCTAGAGTTAAGCTGACAGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTAC +
Preference number: 1 (lower is better)
Translates to: PEVPSRVKLTDRNGC*RGIWRYSAKLSQPY
Trigger: GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAGGGACCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 90 bp ACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATaGACTCCCAGTGAGTGCAGGATCTGGGATAACTGGCAAAGCAGG +
Preference number: 1 (lower is better)
Translates to: TAPDQLLSHASVSSR*TPSECRIWDNWQSR
Trigger: CCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACTGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp TTTGGTATCCAGCAAACACATCTAAACAAATCCCAAACATCCCTCTaGAGTTCTTGCCCCGAGTCTCCCGGAACGCAGCTCAGTAGCTGT +
Preference number: 1 (lower is better)
Translates to: FGIQQTHLNKSQTSL*SSCPESPGTQLSSC
Trigger: ACAGCTACTGAGCTGCGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGATGTTTGGGATTTGTTTAGATGTGTTTGCTGGATACCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp TTTTCTTCCGAGGAGATCCCGATCTTGCCGATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCGATGTCCTTGAAGTGGACATGGATG +
Preference number: 1 (lower is better)
Translates to: FSSEEIPILPINSSL*WSSINAMSLKWTWM
Trigger: CATCCATGTCCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp ATAGGGAAGAGGAATAAAAGATCAATGCTAGTGGGTGTTTCGTCATaGGCCCAAAGCCCGTTGGGAGTCTCTGCGAGGTCATTTGCCCTT +
Preference number: 1 (lower is better)
Translates to: IGKRNKRSMLVGVSS*AQSPLGVSARSFAL
Trigger: AAGGGCAAATGACCTCGCAGAGACTCCCAACGGGCTTTGGGCTCATGACGAAACACCCACTAGCATTGATCTTTTATTCCTCTTCCCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp GCTAGTGGGTGTTTCGTCATGAGCCCAAAGCCCGTTGGGAGTCTCTaGGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAAAT +
Preference number: 1 (lower is better)
Translates to: ASGCFVMSPKPVGSL*EVICPLDSAKAKRN
Trigger: ATTTCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAACGGGCTTTGGGCTCATGACGAAACACCCACTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CCA 90 bp TCTAGAGTTAAGCTGACAGACCGTAATGGTTGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTAAGTCAACCTTACATTGCAATGTAT +
Preference number: 1 (lower is better)
Translates to: SRVKLTDRNGCWRGI*RYSAKLSQPYIAMY
Trigger: ATACATTGCAATGTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGTCAGCTTAACTCTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR TCA 90 bp AACACGGGTCACAGCACCTTTTATTCGTCATCATACAACCTGATGTaGCAGGAAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTT +
Preference number: 1 (lower is better)
Translates to: NTGHSTFYSSSYNLM*QEIQPTSPNSLNAF
Trigger: AAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTGTGACCCGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 90 bp TTTTTAAAAATATATCTTAGGAGCCCTGGTCTCCTGCTGATTCCATaGATGCCTGGAGCACTTGTATCTGGAGAATGGAGACAATATCAC +
Preference number: 1 (lower is better)
Translates to: FLKIYLRSPGLLLIP*MPGALVSGEWRQYH
Trigger: GTGATATTGTCTCCATTCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTCCTAAGATATATTTTTAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR TCA 90 bp TTGAAAACACGGGTCACAGCACCTTTTATTCGTCATCATACAACCTaGTGTGACAGGAAATACAGCCAACATCTCCAAACAGTCTTAATG +
Preference number: 1 (lower is better)
Translates to: LKTRVTAPFIRHHTT*CDRKYSQHLQTVLM
Trigger: CATTAAGACTGTTTGGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTGTGACCCGTGTTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 90 bp GATGATCAATATGCAGAACTGCGTATAGGTGAGGACTCTTCTGCCTaGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGAT +
Preference number: 1 (lower is better)
Translates to: DDQYAELRIGEDSSA*VVHGCCILLSSFFD
Trigger: ATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGGCAGAAGAGTCCTCACCTATACGCAGTTCTGCATATTGATCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR GCA 90 bp GTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTTGTAGCAATTaGTTTAAGACAACCCATTTTGCCTCAGACAGTGACCCTATTAAG +
Preference number: 1 (lower is better)
Translates to: VVFCYLVSLMQICSN*FKTTHFASDSDPIK
Trigger: CTTAATAGGGTCACTGTCTGAGGCAAAATGGGTTGTCTTAAAGCAATTGCTACAAATTTGCATCAAAGAAACTAGATAGCAAAATACAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCATGGATGTGGTCCCTaGGCACATCCACGCGGAAGA +
Preference number: 2 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRHGCGP*AHPRGR
Trigger: TCTTCCGCGTGGATGTGCTCAGGGACCACATCCATG...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGTGCTGCTGCTCCGCCTaGACCTGGGGCTGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRCCCSA*TWGWAA
Trigger: GGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGGGCAGCAGGAGGGCTaGGTGCCTCCCCCAACCCTG +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGGQQEG*VPPPTL
Trigger: CAGGGTTGGGGGAGGCACCCAGCCCTCCTGCTGCCC...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp TGCTTGCGCCGCATGTGTCGGCTCATGGAGGCCCTGGTGGACACCTaGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGT +
Preference number: 2 (lower is better)
Translates to: CLRRMCRLMEALVDT*VPHSWQLCASTLSC
Trigger: ACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCGGCGCAAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTCCCCCGGCCGAAGGTaGGCTGGCACCGCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSSPGRR*AGTACS
Trigger: GCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 2 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGGCAGGAGAACACCTTaGCACACACCGGGCACCCGG +
Preference number: 2 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAGRRTP*HTPGTR
Trigger: CCGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGTGGTGGCGCAGCGCGTaGTTGGTCTTCATGCCTTTC +
Preference number: 2 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARWWRSA*LVFMPF
Trigger: GAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCA...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGGTCAGTCTGGGGCACTaGCCGCCACGTGAGCGGGTG +
Preference number: 2 (lower is better)
Translates to: AAVPVASPQDSHQWMALEVSLGH*PPRERV
Trigger: CACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGAC...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGTGGGTCCACAGAGCCTaGTGGCCACAATGGCTGGAT +
Preference number: 2 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARWVHRA*WPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCA...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGGTGTGGATGAGCTTGTaGCGCTCCAGGTTCCCGATG +
Preference number: 2 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARVWMSL*RSRFPM
Trigger: CATCGGGAACCTGGAGCGCCACAAGCTCATCCACAC...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCCCCCGGCCGAAGGTaGGCTGGCACCGCTTGCAGC +
Preference number: 2 (lower is better)
Translates to: WHSSPQLHGATGPKRILHSPGRR*AGTACS
Trigger: GCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGGGCAGGAGAACACCTTaGCACACACCGGGCACCCGG +
Preference number: 2 (lower is better)
Translates to: RSARRSRRGGCTSARWGPGRRTP*HTPGTR
Trigger: CCGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCC...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGACTCACACCAGTGGATaGCACTCGAGTCCACAGCTG +
Preference number: 2 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARTHTSG*HSSPQL
Trigger: CAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGT...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGGCGCAGCGCGTGCTTaGTCTTCATGCCTTTCCCAC +
Preference number: 2 (lower is better)
Translates to: PPAQSHAGHSEAALGTERGAARA*SSCLSH
Trigger: GTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTATGGGCCACAGACTGTaGGTTCGAGGCTTCCGGCTG +
Preference number: 2 (lower is better)
Translates to: PPAQSHAGHSEAALGTERMGHRL*VRGFRL
Trigger: CAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCAT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACTTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATG +
Preference number: 2 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHLSCVS*TCFCSM
Trigger: CATGCTGCAGAAGCACGTTCAGCTCACACACGACAA...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 2 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAAGCCGCGCGACCCTCTaGATCTGGGCAGCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGSRATL*IWAAVK
Trigger: CTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCCCACGCGGAAGAACTTaGGCCCGCAGATCTCGCAGG +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFPRGRT*ARRSRR
Trigger: CCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGG...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCGGGTGGATGTACTTCTaGACGTTGGGGTCCGGCAGG +
Preference number: 2 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVGWMYF*TLGSGR
Trigger: CCTGCCGGACCCCAACGTGCAGAAGTACATCCACCC...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGGCACCTCGGGGTGCTTaGGCCGCATGTGTCGGCTCA +
Preference number: 2 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRAPRGA*AACVGS
Trigger: TGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGACGCCTGCTGTGGGGGTaGCTGCGGCTGCGAGGGTGG +
Preference number: 2 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRRLLWG*LRLRGW
Trigger: CCACCCTCGCAGCCGCAGGCACCCCCACAGCAGGCG...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGTCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCGGCAGGTTTTCACGGTaGATGACCATGTGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: YSLKVASSGTGAPASSSGGRFSR*MTMWAW
Trigger: CCACGCCCACATGGTCATCCACCGTGAAAACCTGCC...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTGCTCCGCCTGCACCTaGGGCTGGGCCGCCTGCTGT +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHCSACT*GWAACC
Trigger: ACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp AGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTaGATGAAATGGGCCACAGACTGTGGGTTCGAGGCTTCCGGCTGG +
Preference number: 2 (lower is better)
Translates to: SWLPRGVMELTRVVR*MKWATDCGFEASGW
Trigger: CCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 2 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 2 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 2 (lower is better)
Translates to: PPAQSHAGHSEAALGTERTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATTCGCGGACATTGTCGTaGACACGCATGTGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHSRTLS*TRMCSF
Trigger: GAAGGAGCACATGCGTGTGCACGACAATGTCCGCGA...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 2 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: THSRATLCIWAAVKGGQGVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGCGACCCTCTGCATCTaGGCAGCTGTGAAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: AQSHAGHSEAALGTERFPATLCI*AAVKGG
Trigger: TCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGC...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATTTGGTCCCGCACAGCTaGCAGCTCTGCGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDLVPHS*QLCAST
Trigger: GGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAA...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTGGAGGAGGCGTCGATaGTGGTGGTCTCCGGGAGGT +
Preference number: 2 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPWRRRR*WWSPGG
Trigger: ACCTCCCGGAGACCACCACCATCGACGCCTCCTCCA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGGCAAGACGTCAGTCTaGGGCACTGCCCGCCACGTG +
Preference number: 2 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFGKTSV*GTARHV
Trigger: CACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp CGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTaGGCACAGAACGTTTTCCTGAGAACACGTCACACGCTAGAGCAT +
Preference number: 2 (lower is better)
Translates to: RTLQRSPMPDTARRH*AQNVFLRTRHTLEH
Trigger: ATGCTCTAGCGTGTGACGTGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp ACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACTCCTaGATGCCCTTGTGCAGCTTCATGTGGTGGCGCAGCGCGTGCTTG +
Preference number: 2 (lower is better)
Translates to: TFCANLRWHSLHSYS*MPLCSFMWWRSACL
Trigger: CAAGCACGCGCTGCGCCACCACATGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp AGCGGGTGCTGGTCACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTaGACCAGGGTCGTCAGGTTGATGAAATGGGCCACAGACTGTGGG +
Preference number: 2 (lower is better)
Translates to: SGCWSLSWLPRGVME*TRVVRLMKWATDCG
Trigger: CCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCACCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGACTAGTGGGGAAGCCATaGGCCTTCCGCCTTTGGATG +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGLVGKP*AFRLWM
Trigger: CATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAG...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCTTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTC +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFLQLYL*GSESAL
Trigger: GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAA...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFGFHGG*PCGRGR
Trigger: CCTACCACGCCCACATGGTCATCCACCGTGAAAACC...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTGCCCACTGTGTGGATaGGCTTGTGGGTCTCCATGG +
Preference number: 2 (lower is better)
Translates to: AQSHAGHSEAALGTERFPCPLCG*ACGSPW
Trigger: CCATGGAGACCCACAAGCTCATCCACACAGTGGGCA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCTGGAGATTGGTAAACTaGGTCGCGGCCGCAGTGGTG +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFWRLVN*VAAAVV
Trigger: CACCACTGCGGCCGCGACTCAGTTTACCAATCTCCA...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 2 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: THSRATLCIWAAVKGGQGRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTT +
Preference number: 2 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMVRGGR*GPGPGL
Trigger: AAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTAC...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGCCCCACAGACCCTCCTaGATGCTGCCTGGGGATGAA +
Preference number: 2 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRPHRPS*MLPGDE
Trigger: TTCATCCCCAGGCAGCATGCAGGAGGGTCTGTGGGG...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCCCGTTGGGAGTCTCTaGGAGGTCATTTGCCCTTTA +
Preference number: 2 (lower is better)
Translates to: PPAQSHAGHSEAALGTERPVGSL*EVICPL
Trigger: TAAAGGGCAAATGACCTCGCAGAGACTCCCAACGGG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGAGGTACAGGAGGTCTaGCTTCCACGCCGGACCCTC +
Preference number: 2 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFEVQEV*LPRRTL
Trigger: GAGGGTCCGGCGTGGAAGGCAGACCTCCTGTACCTC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGCGCCGGTTGCAGATaGTGCAGCCATAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFSAGCR*CSHSPS
Trigger: AGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGCATGTTGACCTTCTaGGCGAACCTGCGGTGGCAC +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFSMLTF*ANLRWH
Trigger: GTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGTGTGCCGCTTGCAGTaGTTGAGCATGTTGACCTTC +
Preference number: 2 (lower is better)
Translates to: PPAQSHAGHSEAALGTERVCRLQ*LSMLTF
Trigger: GAAGGTCAACATGCTCAAGCACTGCAAGCGGCACAC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGATGCCTTGGTAAGGCATaGTGTGGAGCCCCATCCAGT +
Preference number: 2 (lower is better)
Translates to: THSRATLCIWAAVKGGQGCLGKA*CGAPSS
Trigger: ACTGGATGGGGCTCCACACCATGCCTTACCAAGGCA...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATGGGTCCACAGAGCCTaGTGGCCACAATGGCTGGAT +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGWVHRA*WPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCCAGATCTCGCAGGGGTaGATGTACTTCTGCACGTTG +
Preference number: 2 (lower is better)
Translates to: YSLKVASSGTGAPASSSGQISQG*MYFCTL
Trigger: CAACGTGCAGAAGTACATCCACCCCTGCGAGATCTG...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPCSFMW*RSACLV
Trigger: GACCAAGCACGCGCTGCGCCACCACATGAAGCTGCA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTCTGCGGCTGCGAGGGTaGCAAGACGTCAGTCTGGGG +
Preference number: 2 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCLRLRG*QDVSLG
Trigger: CCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAG...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp GCGAACCTGCGGTGGCACTCCTTGCACTCGTACTCCTTGATGCCCTaGTGCAGCTTCATGTGGTGGCGCAGCGCGTGCTTGGTCTTCATG +
Preference number: 2 (lower is better)
Translates to: ANLRWHSLHSYSLMP*CSFMWWRSACLVFM
Trigger: CATGAAGACCAAGCACGCGCTGCGCCACCACATGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGG +
Preference number: 2 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRGFHGG*PCGRGR
Trigger: CCTACCACGCCCACATGGTCATCCACCGTGAAAACC...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTGCCCACTGTGTGGATaGGCTTGTGGGTCTCCATGG +
Preference number: 2 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSCPLCG*ACGSPW
Trigger: CCATGGAGACCCACAAGCTCATCCACACAGTGGGCA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFTRVHS*TEPRVQ
Trigger: TTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: AAVPVASPQDSHQWMALEPWVSR*LFILLR
Trigger: CCGGAGCAATATGAACAAGCACCTGCTCACCCACGG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGGTGAGGCTCCGAGTCTaGGCTCTCGTCAGAATTGTC +
Preference number: 2 (lower is better)
Translates to: RSARRSRRGGCTSARWGPVRLRV*ALVRIV
Trigger: GACAATTCTGACGAGAGCGCAGACTCGGAGCCTCAC...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACTGCACCTCCATGATGTaGTTCAGGTACTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: GPAQLAALRLHLVVCELNCTSMM*FRYSFP
Trigger: GGGGAAGGAGTACCTGAAGCACATCATGGAGGTGCA...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGTAGGTGGCCTTCAGTaGAAAGCGCCGGTTGCAGAT +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGVGGLQ*KAPVAD
Trigger: ATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTAC...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTCGTGCACACGCATGTaGTCCTTCAGCATGTCCTTC +
Preference number: 2 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGASCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAGGAGCACATGCGTGTGCACGA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTACGGAGCACGTCCACTaGTTGCCCACTGTGTGGATG +
Preference number: 2 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSTEHVH*LPTVWM
Trigger: CATCCACACAGTGGGCAAGCAGTGGACGTGCTCCGT...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TCCATGATGTGCTTCAGGTACTCCTTCCCCCGGCCGAAGGTGAGCTGGCACCGCGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 2 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHRDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...GCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACCTGAAGCACATCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGCGACCCTCTGCATCTaGGCAGCTGTGAAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTATLCI*AAVKGG
Trigger: TCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 2 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGATRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCGTCCACAGAGCCTGGTaGCCACAATGGCTGGATCTA +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFVHRAW*PQWLDL
Trigger: TAGATCCAGCCATTGTGGCCACCAGGCTCTGTGGAC...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCTCCTTGAAGTGGACATaGATGTGGTCCCTGAGCACA +
Preference number: 2 (lower is better)
Translates to: YSLKVASSGTGAPASSSGSLKWT*MWSLST
Trigger: TGTGCTCAGGGACCACATCCATGTCCACTTCAAGGA...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGCGGCCGAAGGTGAGCTaGCACCGCTTGCAGCTGTAC +
Preference number: 2 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMRPKVS*HRLQLY
Trigger: GTACAGCTGCAAGCGGTGCCAGCTCACCTTCGGCCG...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATGTGGGCGTGGTAGGTaGCCTTCAGTGCAAAGCGCC +
Preference number: 2 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTCGRGR*PSVQSA
Trigger: GGCGCTTTGCACTGAAGGCCACCTACCACGCCCACA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATTGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDCSFMW*RSACLV
Trigger: GACCAAGCACGCGCTGCGCCACCACATGAAGCTGCA...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACGTGTGGATGAGCTTGTaGGTCTCCATGGTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: GPAQLAALRLHLVVCELNVWMSL*VSMVFL
Trigger: GAGGAACACCATGGAGACCCACAAGCTCATCCACAC...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGGCCCTGGTGGACACCTTaGTCCCGCACAGCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: VTVRIELSSCNWRSGVVRPWWTP*SRTAGS
Trigger: GCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGG...CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACAGCATGTGTCGGCTCATaGAGGCCCTGGTGGACACCT +
Preference number: 2 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTACVGS*RPWWTP
Trigger: AGGTGTCCACCAGGGCCTCCATGAGCCGACACATGC...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGCTGGACGATGCCAATaGAGGAGGCGTCGATGGTGG +
Preference number: 2 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFAGRCQ*RRRRWW
Trigger: CCACCATCGACGCCTCCTCCATTGGCATCGTCCAGC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp GCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTaGGATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCT +
Preference number: 2 (lower is better)
Translates to: AQDAASSGEAMSLPP*DATNGNDRGTGGLP
Trigger: AGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CAA 90 bp TCCACGCGGAAGAACTTGCGCCCGCAGATCTCGCAGGTGTACTTCTaGTCGCCGTGGGTGAGCAGGTGCTTGTTCATATTGCTCCGGCAG +
Preference number: 2 (lower is better)
Translates to: STRKNLRPQISQVYF*SPWVSRCLFILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp AAGTGGACATGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTaGCGCCCGCAGATCTCGCAGGTGTACTTCTTGTCGCCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: KWTWMWSLSTSTRKN*RPQISQVYFLSPWV
Trigger: CACCCACGGCGACAAGAAGTACACCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp TTCGAGGCTTCCGGCTGGGGGTGGATCTGGACGTCATTTTGGCGGTaGTGCAACATGGCAGAGCCGCTGACGGTATCAAAGGTCACGGTC +
Preference number: 2 (lower is better)
Translates to: FEASGWGWIWTSFWR*CNMAEPLTVSKVTV
Trigger: GACCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp CTGTGGGTTCGAGGCTTCCGGCTGGGGGTGGATCTGGACGTCATTTaGGCGGTTGTGCAACATGGCAGAGCCGCTGACGGTATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: LWVRGFRLGVDLDVI*AVVQHGRAADGIKG
Trigger: ACCTTTGATACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACACTGGTACACAGACGTaGCAGCACGTGTCCCCGCAC +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHTGTQT*QHVSPH
Trigger: GTGCGGGGACACGTGCTGTCACGTCTGTGTACCAGT...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGAGGTAAGGTGAGGAGGTaGGCCCCACAGACCCTCCTG +
Preference number: 2 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRGKVRR*APQTLL
Trigger: CAGGAGGGTCTGTGGGGCTCACCTCCTCACCTTACC...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGAACTGCGTATAGGTaGGGACTCTTCTGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFRTAYR*GLFCLG
Trigger: ACCCAGGCAGAAGAGTCCTCACCTATACGCAGTTCT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGAGAACTGCGTATAGGTaGGGACTCTTCTGCCTGGGT +
Preference number: 2 (lower is better)
Translates to: AAVPVASPQDSHQWMALERTAYR*GLFCLG
Trigger: ACCCAGGCAGAAGAGTCCTCACCTATACGCAGTTCT...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCACATGGCAGAGCCGCTaGCGGTATCAAAGGTCACGG +
Preference number: 2 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFTWQSR*RYQRSR
Trigger: CCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGT...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACTCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 2 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTGACCCTCCTGCATGCTaGCTGGGGATGAACATTCCT +
Preference number: 2 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSDPPAC*LGMNIP
Trigger: AGGAATGTTCATCCCCAGGCAGCATGCAGGAGGGTC...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWTRVHS*TEPRVQ
Trigger: TTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTCCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGG +
Preference number: 2 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPPWVSR*LFILLR
Trigger: CCGGAGCAATATGAACAAGCACCTGCTCACCCACGG...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGGCCACGCGGAAGAACTTaGGCCCGCAGATCTCGCAGG +
Preference number: 2 (lower is better)
Translates to: VTVRIELSSCNWRSGVVRPRGRT*ARRSRR
Trigger: CCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGG...CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGGCGTTCAGGGGTGGTAAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACGTGTGCCGCTTGCAGTaGTTGAGCATGTTGACCTTC +
Preference number: 2 (lower is better)
Translates to: WRSGVVRCPTATGWRLVNVCRLQ*LSMLTF
Trigger: GAAGGTCAACATGCTCAAGCACTGCAAGCGGCACAC...GTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGCGACCCTCTGCATCTaGGCAGCTGTGAAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCATLCI*AAVKGG
Trigger: TCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATTCCACTCGGGATTCTaGCTGGGCTTCAGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGFHSGF*LGFSQN
Trigger: ATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGGGCAGCAGGAGGGCTaGGTGCCTCCCCCAACCCTG +
Preference number: 2 (lower is better)
Translates to: TRDSGWASARMDTFGLQRGQQEG*VPPPTL
Trigger: CAGGGTTGGGGGAGGCACCCAGCCCTCCTGCTGCCC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCCAAGACTCACACCAGTaGATGGCACTCGAGTCCACA +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFQDSHQ*MALEST
Trigger: TGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTG...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCTACTTCTTGTCGCCGTaGGTGAGCAGGTGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTCACCCACGGCGACAAGAAGTA...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTCAGATCTCGCAGGGGTaGATGTACTTCTGCACGTTG +
Preference number: 2 (lower is better)
Translates to: AQSHAGHSEAALGTERFPQISQG*MYFCTL
Trigger: CAACGTGCAGAAGTACATCCACCCCTGCGAGATCTG...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATGCTTCCGGCTGGGGGTaGATCTGGACGTCATTTTGG +
Preference number: 2 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDASGWG*IWTSFW
Trigger: CCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGC...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTTGCTGGTCACTAAGCTaGCTCCCCAGGGGCGTGATG +
Preference number: 2 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCCWSLS*LPRGVM
Trigger: CATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCA...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp CAGATCTCGCAGGTGTACTTCTTGTCGCCGTGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACCGGG +
Preference number: 2 (lower is better)
Translates to: QISQVYFLSPWVSRC*FILLRQENTLPHTG
Trigger: CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGAGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp ATGGCAGAGCCGCTGACGGTATCAAAGGTCACGGTCAGGATTGAGTaGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGGTGCCCCACG +
Preference number: 2 (lower is better)
Translates to: MAEPLTVSKVTVRIE*SSCNWRSGVVRCPT
Trigger: CGTGGGGCACCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGACCTTTGATACCGTCAGCGGCTCTGCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 2 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTTCCCGATGCTGTTaGAGATCCGCCCGCAGATCT +
Preference number: 2 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMGSRCC*RSARRS
Trigger: AGATCTGCGGGCGGATCTTCAACAGCATCGGGAACC...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACGGTTCCCGATGCTGTTaGAGATCCGCCCGCAGATCT +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHGSRCC*RSARRS
Trigger: AGATCTGCGGGCGGATCTTCAACAGCATCGGGAACC...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTGCACTCGTACTCCTTaGTGCCCTTGTGCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSCTRTP*CPCAAS
Trigger: TGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTCCACCTTGTCGTGTGTaGGCTGAACGTGCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFPPCRV*AERASA
Trigger: TGCAGAAGCACGTTCAGCTCACACACGACAAGGTGG...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACTTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: GPAQLAALRLHLVVCELNFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACCGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: WHSSPQLHGATGPKRILHRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTT +
Preference number: 2 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWVRGGR*GPGPGL
Trigger: AAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTAC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTT +
Preference number: 2 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRVRGGR*GPGPGL
Trigger: AAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTAC...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 2 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGGTGCAAAGCGCCGGTTaGAGATGCTGCAGCCATAGC +
Preference number: 2 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEVQSAG*RCCSHS
Trigger: GCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCAC...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 2 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRTRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTAATTCTCCACTGAGATaGGTCCACAGAGCCTGGTGG +
Preference number: 2 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSNSPLR*VHRAWW
Trigger: CCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATT...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGCCTTTCACAATCCAATaGGAAAGCCCAAGACGCCGC +
Preference number: 2 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRPFTIQ*ESPRRR
Trigger: GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGG...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCTCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp GTCTTCATGCCTTTCCCACACTCGGCACACAGGTACTCGCGGACATaGTCGTGCACACGCATGTGCTCCTTCAGCATGTCCTTCCTGGCA +
Preference number: 2 (lower is better)
Translates to: VFMPFPHSAHRYSRT*SCTRMCSFSMSFLA
Trigger: TGCCAGGAAGGACATGCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGAGTGTGGGAAAGGCATGAAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp TGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTaGCACTCGTACTCCTTGATGCCCTTGTGCAGCTTCATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: CLSMLTFCANLRWHS*HSYSLMPLCSFMWW
Trigger: CCACCACATGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: WHSSPQLHGATGPKRILHACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 2 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTGCACTCGTACTCCTTaGTGCCCTTGTGCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTCTRTP*CPCAAS
Trigger: TGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCA...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGGTCTCTGAGTATTCGCTaGAGGTGGCGTCCTCGGGCA +
Preference number: 2 (lower is better)
Translates to: VTVRIELSSCNWRSGVVRSLSIR*RWRPRA
Trigger: TGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGA...CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: AQSHAGHSEAALGTERFPFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTGGTGCTTGTTCATATTaGTCCGGCAGGAGAACACCT +
Preference number: 2 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPGACSY*SGRRTP
Trigger: AGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACC...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGAGCGCCGGTTGCAGATaGTGCAGCCATAGCCCTTCT +
Preference number: 2 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMSAGCR*CSHSPS
Trigger: AGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCT...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGTCCTTGATGCCCTTGTaGAGCTTCATGTGGTGGCGC +
Preference number: 2 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWSLMPL*SFMWWR
Trigger: GCGCCACCACATGAAGCTGCACAAGGGCATCAAGGA...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCTCTTTAATCCCCGTGTaGCGCTTGCAGTGCTTGAGC +
Preference number: 2 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFSLIPV*RLQCLS
Trigger: GCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGA...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGCGAGCACCTCGGGGTaGTTGCGCCGCATGTGTCGG +
Preference number: 2 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTASTSG*LRRMCR
Trigger: CCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 2 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTACTCTTCTGCCTGGGTaGTACATGGTTGTTGTATTT +
Preference number: 2 (lower is better)
Translates to: PPAQSHAGHSEAALGTERTLLPG*YMVVVF
Trigger: AAATACAACAACCATGTACCACCCAGGCAGAAGAGT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGATGGGTCCACAGAGCCTaGTGGCCACAATGGCTGGAT +
Preference number: 2 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRWVHRA*WPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCA...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTCAAGACTCACACCAGTaGATGGCACTCGAGTCCACA +
Preference number: 2 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFQDSHQ*MALEST
Trigger: TGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTG...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGTACTTCTTGTCGCCGTaGGTGAGCAGGTGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTCACCCACGGCGACAAGAAGTA...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCG +
Preference number: 2 (lower is better)
Translates to: DVTARVPAHADLAVHRTFINSSL*WSSINA
Trigger: CGCGTTGATGGATGACCACCAGAGGGAAGAGTTTAT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACAGTGTGGATGAGCTTGTaGGTCTCCATGGTGTTCCTC +
Preference number: 2 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTVWMSL*VSMVFL
Trigger: GAGGAACACCATGGAGACCCACAAGCTCATCCACAC...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGACGCCTACACTGCCTGTaGACTCCGTCTCTTTCTCTG +
Preference number: 2 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRRLHCL*TPSLSL
Trigger: CAGAGAAAGAGACGGAGTTCACAGGCAGTGTAGGCG...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCTGGATATTACTAAGATaGGTTTTGAGCTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: YSLKVASSGTGAPASSSGWILLR*VLSWSQ
Trigger: CTGACTCCAGCTCAAAACGCATCTTAGTAATATCCA...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAAATCATCCTTTGTTCTaGTGGCAACATCAGGACTGC +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGNHPLF*WQHQDC
Trigger: GCAGTCCTGATGTTGCCAGCAGAACAAAGGATGATT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGAGACCCTCCTGCATGCTaGCTGGGGATGAACATTCCT +
Preference number: 2 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRDPPAC*LGMNIP
Trigger: AGGAATGTTCATCCCCAGGCAGCATGCAGGAGGGTC...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGACTCTGCGAGGTCATTTaGCCTTTAGATTCTGCAAAG +
Preference number: 2 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGLCEVI*PLDSAK
Trigger: CTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAG...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACGGTGCTTGTTCATATTaGTCCGGCAGGAGAACACCT +
Preference number: 2 (lower is better)
Translates to: WHSSPQLHGATGPKRILHGACSY*SGRRTP
Trigger: AGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACC...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACTGCACCTCCATGATGTaGTTCAGGTACTCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYCTSMM*FRYSFP
Trigger: GGGGAAGGAGTACCTGAAGCACATCATGGAGGTGCA...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAGCGAGCACCTCGGGGTaGTTGCGCCGCATGTGTCGG +
Preference number: 2 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRASTSG*LRRMCR
Trigger: CCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGC...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGCTCAGGCTGGACGATaGCAATGGAGGAGGCGTCGA +
Preference number: 2 (lower is better)
Translates to: LPAATCEYCLCSHRNRALAQAGR*QWRRRR
Trigger: TCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTTCCACTCGGGATTCTaGCTGGGCTTCAGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEFHSGF*LGFSQN
Trigger: ATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCGAGGACTCTTCTGCCTaGGTGGTACATGGTTGTTGT +
Preference number: 2 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFEDSSA*VVHGCC
Trigger: ACAACAACCATGTACCACCCAGGCAGAAGAGTCCTC...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACTGTACTTCTGCACGTTaGGGTCCGGCAGGTTTTCAC +
Preference number: 2 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDCTSAR*GPAGFH
Trigger: GTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACA...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGGGCTCATGGAGGCCCTaGTGGACACCTTGGTCCCGC +
Preference number: 2 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLGSWRP*WTPWSR
Trigger: GCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCC...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp ATGAAATCTTTAATCCCCGTGTGCCGCTTGCAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTAC +
Preference number: 2 (lower is better)
Translates to: MKSLIPVCRLQCLSM*TFCANLRWHSLHSY
Trigger: GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGATTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTCTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 2 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPLLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCACTGGTACACAGACGTaGCAGCACGTGTCCCCGCAC +
Preference number: 2 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRTGTQT*QHVSPH
Trigger: GTGCGGGGACACGTGCTGTCACGTCTGTGTACCAGT...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACACTGGTACACAGACGTaGCAGCACGTGTCCCCGCAC +
Preference number: 2 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYTGTQT*QHVSPH
Trigger: GTGCGGGGACACGTGCTGTCACGTCTGTGTACCAGT...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGTGGGTGTTTCGTCATaGGCCCAAAGCCCGTTGGGA +
Preference number: 2 (lower is better)
Translates to: LPAATCEYCLCSHRNRALVGVSS*AQSPLG
Trigger: TCCCAACGGGCTTTGGGCTCATGACGAAACACCCAC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTC +
Preference number: 2 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGLQLYL*GSESAL
Trigger: GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 2 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACAGCCGCGCGACCCTCTaGATCTGGGCAGCTGTGAAG +
Preference number: 2 (lower is better)
Translates to: TVATNRVPGKLRANFSPHSRATL*IWAAVK
Trigger: CTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCT...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGCCGGTTGCAGATGCTaGAGCCATAGCCCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: LPAATCEYCLCSHRNRALAGCRC*SHSPSP
Trigger: AGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCACACAGCTGGCAGCTCTaGGCCTCCACCTTGTCGTGT +
Preference number: 2 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPHSWQL*ASTLSC
Trigger: ACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTG...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACCCACTACCTGCTGAATaGTCTGTACTGCGGAATTGG +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHPLPAE*SVLRNW
Trigger: CCAATTCCGCAGTACAGAGCATTCAGCAGGTAGTGG...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAATGCTGCTGCTCCGCCTaGACCTGGGGCTGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKCCCSA*TWGWAA
Trigger: GGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 2 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACGCTCAGCACGCCTCATaGTTTCAGCCCATAGTTGTA +
Preference number: 2 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDAQHAS*FQPIVV
Trigger: TACAACTATGGGCTGAAACCATGAGGCGTGCTGAGC...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGGCTCAGCACGCCTCATaGTTTCAGCCCATAGTTGTA +
Preference number: 2 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWAQHAS*FQPIVV
Trigger: TACAACTATGGGCTGAAACCATGAGGCGTGCTGAGC...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGCTCAGCACGCCTCATaGTTTCAGCCCATAGTTGTA +
Preference number: 2 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMAQHAS*FQPIVV
Trigger: TACAACTATGGGCTGAAACCATGAGGCGTGCTGAGC...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACGCTCAGCACGCCTCATaGTTTCAGCCCATAGTTGTA +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHAQHAS*FQPIVV
Trigger: TACAACTATGGGCTGAAACCATGAGGCGTGCTGAGC...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTCAGAATGGATACATTTaGATTGCAGAGAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSQNGYI*IAENPE
Trigger: CTCAGGATTCTCTGCAATCCAAATGTATCCATTCTG...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGGGGCTTCAGCCAGAATaGATACATTTGGATTGCAGA +
Preference number: 2 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRGLQPE*IHLDCR
Trigger: TCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCC...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACCTCCTGCTGATTCCATaGATGCCTGGAGCACTTGTA +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHLLLIP*MPGALV
Trigger: TACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAG...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACGAGGACTCTTCTGCCTaGGTGGTACATGGTTGTTGT +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHEDSSA*VVHGCC
Trigger: ACAACAACCATGTACCACCCAGGCAGAAGAGTCCTC...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACTCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 2 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTAGGAGGCGTCGATGGTaGTGGTCTCCGGGAGGTGGT +
Preference number: 2 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTRRRRW*WSPGGG
Trigger: ACCACCTCCCGGAGACCACCACCATCGACGCCTCCT...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCTTGAGCTGGAGTCAGTaGCCTCACGTGACCCCTTGC +
Preference number: 2 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRLSWSQ*PHVTPC
Trigger: GCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAA...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTTCCAGCGCAGTCCCATaGCGGACACAGCGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: TWLFTAHSVLGAINASISSSAVP*RTQRGG
Trigger: GCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGA...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGTGCAAAGCGCCGGTTaGAGATGCTGCAGCCATAGC +
Preference number: 2 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYVQSAG*RCCSHS
Trigger: GCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCAC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGCGTGCTTGGTCTTCATaGCTTTCCCACACTCGGCAC +
Preference number: 2 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWRAWSS*LSHTRH
Trigger: GTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACG...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGATGCCTTGGTAAGGCATaGTGTGGAGCCCCATCCAGT +
Preference number: 2 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRCLGKA*CGAPSS
Trigger: ACTGGATGGGGCTCCACACCATGCCTTACCAAGGCA...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCAGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACGATTCCATGGATGCCTaGAGCACTTGTATCTGGAGA +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHDSMDA*STCIWR
Trigger: TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATC...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTC +
Preference number: 2 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTVVSGR*SRSSIL
Trigger: GAGGATCGATGACCTGGACCACCTCCCGGAGACCAC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp ACTAAGATGCGTTTTGAGCTGGAGTCAGTGACCTCACGTGACCCCTaGCACATGATGACCGTGATGACCTCGAAGGTTGCAGGATCAGGT +
Preference number: 2 (lower is better)
Translates to: TKMRFELESVTSRDP*HMMTVMTSKVAGSG
Trigger: ACCTGATCCTGCAACCTTCGAGGTCATCACGGTCATCATGTGCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAAAACGCATCTTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGCTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 2 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGLLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACCTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 2 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHLLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGTTGAGCTGGAGTCAGTaGCCTCACGTGACCCCTTGC +
Preference number: 2 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLLSWSQ*PHVTPC
Trigger: GCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAA...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTTTGAGCTGGAGTCAGTaGCCTCACGTGACCCCTTGC +
Preference number: 2 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTLSWSQ*PHVTPC
Trigger: GCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAA...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACACGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 2 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 2 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTCGCGGACATTGTCGTaGACACGCATGTGCTCCTTC +
Preference number: 2 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASSRTLS*TRMCSF
Trigger: GAAGGAGCACATGCGTGTGCACGACAATGTCCGCGA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 2 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCGCACACGCAGACCTaGCTGTTCACCGCACATTCA +
Preference number: 2 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTPHTQT*LFTAHS
Trigger: TGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATTCTTTAACAACATTTaGTGCGGTCTTACTCTAGGC +
Preference number: 2 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTFFNNI*CGLTLG
Trigger: GCCTAGAGTAAGACCGCATCAAATGTTGTTAAAGAA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACATCTTGTCGCCGTGGGTaGGCAGGTGCTTGTTCATAT +
Preference number: 2 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTSCRRG*AGACSY
Trigger: ATATGAACAAGCACCTGCTCACCCACGGCGACAAGA...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAACATGGCAGAGCCGCTaGCGGTATCAAAGGTCACGG +
Preference number: 2 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRTWQSR*RYQRSR
Trigger: CCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGT...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGAAATCATCCTTTGTTCTaGTGGCAACATCAGGACTGC +
Preference number: 2 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRNHPLF*WQHQDC
Trigger: GCAGTCCTGATGTTGCCAGCAGAACAAAGGATGATT...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGCCGGTTGCAGATGCTaGAGCCATAGCCCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRAGCRC*SHSPSP
Trigger: AGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATCGTGCACACGCATGTaGTCCTTCAGCATGTCCTTC +
Preference number: 2 (lower is better)
Translates to: TRDSGWASARMDTFGLQRSCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAGGAGCACATGCGTGTGCACGA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATCGTGCTTGGTCTTCATaGCTTTCCCACACTCGGCAC +
Preference number: 2 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDRAWSS*LSHTRH
Trigger: GTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACG...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAATCAGGGGTGGTAAGGTaGCCCACGGCCACCGGCTGG +
Preference number: 2 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWESGVVR*PTATGW
Trigger: CCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGA...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 2 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTATCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: LPAATCEYCLCSHRNRALSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAAGTGAGTGCAGGATCTaGGATAACTGGCAAAGCAGG +
Preference number: 2 (lower is better)
Translates to: LPAATCEYCLCSHRNRALSECRI*DNWQSR
Trigger: CCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACT...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATGGAGCACTTGTATCTaGAGAATGGAGACAATATCA +
Preference number: 2 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTWSTCI*RMETIS
Trigger: TGATATTGTCTCCATTCTCCAGATACAAGTGCTCCA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAAAGTGGACATGGATGTaGTCCCTGAGCACATCCACG +
Preference number: 2 (lower is better)
Translates to: TRDSGWASARMDTFGLQRKWTWM*SLSTST
Trigger: CGTGGATGTGCTCAGGGACCACATCCATGTCCACTT...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTCTTGTGACTTCGCTTaGCAGCTTTCCCGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYSCDFA*QLSRAS
Trigger: GGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACTGAGCTCGATGGTGTaGTCACATTTGGGTCACCCA +
Preference number: 2 (lower is better)
Translates to: TRDSGWASARMDTFGLQRLSSMV*SHLGHP
Trigger: TGGGTGACCCAAATGTGACCACACCATCGAGCTCAG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp GCAGGATCTGGGATAACTGGCAAAGCAGGACACCTTAAGGCAGGTTaGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAG +
Preference number: 2 (lower is better)
Translates to: AGSGITGKAGHLKAG*SSHCGHKQSTRKVK
Trigger: CTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTCCTGCTTTGCCAGTTATCCCAGATCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CAA 90 bp CTCTCGTCAGAATTGTCATCGTTTTCTTCCGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTCTGGTGGTCATCCATCAACGCGATG +
Preference number: 2 (lower is better)
Translates to: LSSELSSFSSEEIPI*PINSSLWWSSINAM
Trigger: CATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTCTGACGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: TVATNRVPGKLRANFSPHACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACCACTATTCATTCAACTaGGAGGTGAGAGCTAGGCGC +
Preference number: 2 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYHYSFN*EVRARR
Trigger: GCGCCTAGCTCTCACCTCTCAGTTGAATGAATAGTG...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATCAACGCGATGTCCTTaGAGTGGACATGGATGTGGT +
Preference number: 2 (lower is better)
Translates to: TRDSGWASARMDTFGLQRSTRCP*SGHGCG
Trigger: ACCACATCCATGTCCACTTCAAGGACATCGCGTTGA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGTCACCACTACCTGCTaGATGCTCTGTACTGCGGAA +
Preference number: 2 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTVTTTC*MLCTAE
Trigger: TTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGAC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTT +
Preference number: 2 (lower is better)
Translates to: TAHSVLGAINASISELTSVRGGR*GPGPGL
Trigger: AAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTAC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCAGAAAATGTTCCCTGCTaGCTGCTGCCACCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPENVPC*LLPPVN
Trigger: ATTCACAGGTGGCAGCAGGCAGCAGGGAACATTTTC...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAGCACCTCGGGGTGCTTaGGCCGCATGTGTCGGCTCA +
Preference number: 2 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEAPRGA*AACVGS
Trigger: TGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 2 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGCGACCCTCTGCATCTaGGCAGCTGTGAAGGGTGGA +
Preference number: 2 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRATLCI*AAVKGG
Trigger: TCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 2 (lower is better)
Translates to: TVATNRVPGKLRANFSPHTRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTAGTGAGTGCAGGATCTaGGATAACTGGCAAAGCAGG +
Preference number: 2 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASSECRI*DNWQSR
Trigger: CCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACT...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAAGTGAGTGCAGGATCTaGGATAACTGGCAAAGCAGG +
Preference number: 2 (lower is better)
Translates to: TRDSGWASARMDTFGLQRSECRI*DNWQSR
Trigger: CCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACT...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTCACTGCTCGCAGGCGTaGCTCTTCACACCTGTGTGG +
Preference number: 2 (lower is better)
Translates to: TWLFTAHSVLGAINASISHCSQA*LFTPVW
Trigger: CCACACAGGTGTGAAGAGCCACGCCTGCGAGCAGTG...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 2 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRLLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTCTCTGAGTATTCGCTaGAGGTGGCGTCCTCGGGCA +
Preference number: 2 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANSLSIR*RWRPRA
Trigger: TGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGATCCCAAACATCCCTCTaGAGTTCTTGCCCCGAGTCT +
Preference number: 2 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRSQTSL*SSCPES
Trigger: AGACTCGGGGCAAGAACTGCAGAGGGATGTTTGGGA...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCTTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCATTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 2 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTTGGTGGCGCAGCGCGTaGTTGGTCTTCATGCCTTTC +
Preference number: 2 (lower is better)
Translates to: TWLFTAHSVLGAINASISWWRSA*LVFMPF
Trigger: GAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCA...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTTCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACCCGCACACGCAGACCTaGCTGTTCACCGCACATTCA +
Preference number: 2 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANPHTQT*LFTAHS
Trigger: TGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGG...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATTTGTCCTCTCACTGTaGCCACAAACAGAGTACCAG +
Preference number: 2 (lower is better)
Translates to: TRDSGWASARMDTFGLQRFVLSL*PQTEYQ
Trigger: CTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTTTGTCCTCTCACTGTaGCCACAAACAGAGTACCAG +
Preference number: 2 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASFVLSL*PQTEYQ
Trigger: CTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGATTCCATGGATGCCTaGAGCACTTGTATCTGGAGA +
Preference number: 2 (lower is better)
Translates to: TRDSGWASARMDTFGLQRDSMDA*STCIWR
Trigger: TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACTCCTTGAAGTGGACATaGATGTGGTCCCTGAGCACA +
Preference number: 2 (lower is better)
Translates to: TVATNRVPGKLRANFSPHSLKWT*MWSLST
Trigger: TGTGCTCAGGGACCACATCCATGTCCACTTCAAGGA...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTGCGCGAACCTGCGGTaGCACTCCTTGCACTCGTAC +
Preference number: 2 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTCANLR*HSLHSY
Trigger: GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 2 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR TCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGTCTGCTGTTTGGAGTaGAGTGCTGAGAAAGTTGCG +
Preference number: 2 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRVCCLE*SAEKVA
Trigger: CGCAACTTTCTCAGCACTTCACTCCAAACAGCAGAC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGACCCTCCTGCATGCTaGCTGGGGATGAACATTCCT +
Preference number: 2 (lower is better)
Translates to: TWLFTAHSVLGAINASISDPPAC*LGMNIP
Trigger: AGGAATGTTCATCCCCAGGCAGCATGCAGGAGGGTC...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTCCTTGATGCCCTTGTaGAGCTTCATGTGGTGGCGC +
Preference number: 2 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANSLMPL*SFMWWR
Trigger: GCGCCACCACATGAAGCTGCACAAGGGCATCAAGGA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGGGCTTCAGCCAGAATaGATACATTTGGATTGCAGA +
Preference number: 2 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRGLQPE*IHLDCR
Trigger: TCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAAGTGTTTCCTCAAGATaGACTCCCAGTGAGTGCAGG +
Preference number: 2 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRSVSSR*TPSECR
Trigger: CCTGCACTCACTGGGAGTCCATCTTGAGGAAACACT...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAATGTGGGCGTGGTAGGTaGCCTTCAGTGCAAAGCGCC +
Preference number: 2 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWECGRGR*PSVQSA
Trigger: GGCGCTTTGCACTGAAGGCCACCTACCACGCCCACA...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCGTGTGGATGAGCTTGTaGCGCTCCAGGTTCCCGATG +
Preference number: 2 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTVWMSL*RSRFPM
Trigger: CATCGGGAACCTGGAGCGCCACAAGCTCATCCACAC...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTCACGTGAGCGGGTGCTaGTCACTAAGCTGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIHVSGC*SLSWLP
Trigger: GGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTG...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACAGCGAGGCGGCACTTaGCACAGAACGTTTTCCTGT +
Preference number: 2 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRQRGGT*HRTFSC
Trigger: ACAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTG...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR-3UTR TCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 2 (lower is better)
Translates to: LLFVIIQPDVTGNTANISDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTATGGAGCACTTGTATCTaGAGAATGGAGACAATATCA +
Preference number: 2 (lower is better)
Translates to: LPAATCEYCLCSHRNRALWSTCI*RMETIS
Trigger: TGATATTGTCTCCATTCTCCAGATACAAGTGCTCCA...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 2 (lower is better)
Translates to: TAHSVLGAINASISELTSVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGTCTGCTGTTTGGAGTaGAGTGCTGAGAAAGTTGCG +
Preference number: 2 (lower is better)
Translates to: TWLFTAHSVLGAINASISVCCLE*SAEKVA
Trigger: CGCAACTTTCTCAGCACTTCACTCCAAACAGCAGAC...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGTGGGTGTTTCGTCATaGGCCCAAAGCCCGTTGGGA +
Preference number: 2 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIVGVSS*AQSPLG
Trigger: TCCCAACGGGCTTTGGGCTCATGACGAAACACCCAC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 2 (lower is better)
Translates to: TAHSVLGAINASISELTSTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTCGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 2 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 2 (lower is better)
Translates to: TAHSVLGAINASISELTSDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCATGGATATTACTAAGATaGGTTTTGAGCTGGAGTCAG +
Preference number: 2 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPWILLR*VLSWSQ
Trigger: CTGACTCCAGCTCAAAACGCATCTTAGTAATATCCA...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGTGAGGCTCCGAGTCTaGGCTCTCGTCAGAATTGTC +
Preference number: 2 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYVRLRV*ALVRIV
Trigger: GACAATTCTGACGAGAGCGCAGACTCGGAGCCTCAC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 2 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACCATCCTTTGTTCTGCTaGCAACATCAGGACTGCTCC +
Preference number: 2 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANHPLFC*QHQDCS
Trigger: GGAGCAGTCCTGATGTTGCCAGCAGAACAAAGGATG...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGGCAGGTTTTCACGGTaGATGACCATGTGGGCGTGG +
Preference number: 2 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLGRFSR*MTMWAW
Trigger: CCACGCCCACATGGTCATCCACCGTGAAAACCTGCC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTCTGTACTGCGGAATTaGTCTCGTCGCCTACACTGC +
Preference number: 2 (lower is better)
Translates to: LLFVIIQPDVTGNTANISSVLRN*SRRLHC
Trigger: GCAGTGTAGGCGACGAGACCAATTCCGCAGTACAGA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATGGTGTTCCTCTCGCTaGATGTCTTCCCACACAATT +
Preference number: 2 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRWCSSR*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGCGAGAGGAACACCA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACTTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATG +
Preference number: 2 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYLSCVS*TCFCSM
Trigger: CATGCTGCAGAAGCACGTTCAGCTCACACACGACAA...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAACGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 2 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 2 (lower is better)
Translates to: TAHSVLGAINASISELTSCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 2 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTATGCCTTGGTAAGGCATaGTGTGGAGCCCCATCCAGT +
Preference number: 2 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLCLGKA*CGAPSS
Trigger: ACTGGATGGGGCTCCACACCATGCCTTACCAAGGCA...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 2 (lower is better)
Translates to: TAHSVLGAINASISELTSTRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACTTCCACTCGGGATTCTaGCTGGGCTTCAGCCAGAAT +
Preference number: 2 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYFHSGF*LGFSQN
Trigger: ATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTAAGTGGACATGGATGTaGTCCCTGAGCACATCCACG +
Preference number: 2 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLKWTWM*SLSTST
Trigger: CGTGGATGTGCTCAGGGACCACATCCATGTCCACTT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATG +
Preference number: 2 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTNSSLW*SSINAM
Trigger: CATCGCGTTGATGGATGACCACCAGAGGGAAGAGTT...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAACAGAACGTTTTCCTGTaGCCTCCCCGCAAGACTCAC +
Preference number: 2 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKQNVFL*PPRKTH
Trigger: GTGAGTCTTGCGGGGAGGCCACAGGAAAACGTTCTG...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR-3UTR TCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTATCTTGTCGCCGTGGGTaGGCAGGTGCTTGTTCATAT +
Preference number: 2 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLSCRRG*AGACSY
Trigger: ATATGAACAAGCACCTGCTCACCCACGGCGACAAGA...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAATCAACGCGATGTCCTTaGAGTGGACATGGATGTGGT +
Preference number: 2 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWESTRCP*SGHGCG
Trigger: ACCACATCCATGTCCACTTCAAGGACATCGCGTTGA...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTGGTGTTCCTCTCGCTaGATGTCTTCCCACACAATT +
Preference number: 2 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTWCSSR*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGCGAGAGGAACACCA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGTCACCACTACCTGCTaGATGCTCTGTACTGCGGAA +
Preference number: 2 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIVTTTC*MLCTAE
Trigger: TTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGAC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR GCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACAATCATCCTTTGTTCTaGTGGCAACATCAGGACTGC +
Preference number: 2 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANNHPLF*WQHQDC
Trigger: GCAGTCCTGATGTTGCCAGCAGAACAAAGGATGATT...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCCTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 2 (lower is better)
Translates to: LLFVIIQPDVTGNTANISLLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR GCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGAAAATGTTCCCTGCTaGCTGCTGCCACCTGTGAAT +
Preference number: 2 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKENVPC*LLPPVN
Trigger: ATTCACAGGTGGCAGCAGGCAGCAGGGAACATTTTC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 2 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATG +
Preference number: 2 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKNSSLW*SSINAM
Trigger: CATCGCGTTGATGGATGACCACCAGAGGGAAGAGTT...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCG +
Preference number: 2 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYINSSL*WSSINA
Trigger: CGCGTTGATGGATGACCACCAGAGGGAAGAGTTTAT...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTTTGGAGTGAAGTGCTaGGAAAGTTGCGTTTTGAAA +
Preference number: 2 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANFGVKC*ESCVLK
Trigger: TTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACAGAATGGATACATTTaGATTGCAGAGAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRQNGYI*IAENPE
Trigger: CTCAGGATTCTCTGCAATCCAAATGTATCCATTCTG...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAACAGAATGGATACATTTaGATTGCAGAGAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEQNGYI*IAENPE
Trigger: CTCAGGATTCTCTGCAATCCAAATGTATCCATTCTG...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCAGAATGGATACATTTaGATTGCAGAGAATCCTGAG +
Preference number: 2 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYQNGYI*IAENPE
Trigger: CTCAGGATTCTCTGCAATCCAAATGTATCCATTCTG...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTCTTGTATCTGGAGAATaGAGACAATATCACCCCAAG +
Preference number: 2 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQILVSGE*RQYHPK
Trigger: CTTGGGGTGATATTGTCTCCATTCTCCAGATACAAG...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR TCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTTTTGGAGTGAAGTGCTaGGAAAGTTGCGTTTTGAAA +
Preference number: 2 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIFGVKC*ESCVLK
Trigger: TTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAA...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GGTGCCTGCGGCTGCGAGGGTGGCAAGACGTCAGTCTaGGGCACTGCCCGCCACGTGAGCGGGTGCTGGTCA +
Preference number: 3 (lower is better)
Translates to: GACGCEGGKTSV*GTARHVSGCWS
Trigger: TGACCAGCACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAGGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp TCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATaGCGGACACAGCGAGGCGGCACTTGGCACAGAACG +
Preference number: 3 (lower is better)
Translates to: SAFHAGPSSAVP*RTQRGGTWHRT
Trigger: CGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 72 bp CGGCTGCGAGGGTGGCAAGACGTCAGTCTGGGGCACTaGCCGCCACGTGAGCGGGTGCTGGTCACTAAGCTG +
Preference number: 3 (lower is better)
Translates to: RLRGWQDVSLGH*PPRERVLVTKL
Trigger: CAGCTTAGTGACCAGCACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCCACCCTCGCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GCACCTCGGGGTGCTTGCGCCGCATGTGTCGGCTCATaGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCT +
Preference number: 3 (lower is better)
Translates to: APRGACAACVGS*RPWWTPWSRTA
Trigger: AGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp AGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTaGGTCGCGGCCGCAGTGGTGATGGGGGTCACGGTG +
Preference number: 3 (lower is better)
Translates to: RCPTATGWRLVN*VAAAVVMGVTV
Trigger: CACCGTGACCCCCATCACCACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GCATGTGTCGGCTCATGGAGGCCCTGGTGGACACCTTaGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCT +
Preference number: 3 (lower is better)
Translates to: ACVGSWRPWWTP*SRTAGSSAPPP
Trigger: AGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GGTGCTTGCGCCGCATGTGTCGGCTCATGGAGGCCCTaGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCT +
Preference number: 3 (lower is better)
Translates to: GACAACVGSWRP*WTPWSRTAGSS
Trigger: AGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCGGCGCAAGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp ACTGCCCGCCACGTGAGCGGGTGCTGGTCACTAAGCTaGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTC +
Preference number: 3 (lower is better)
Translates to: TARHVSGCWSLS*LPRGVMELTRV
Trigger: GACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCGGGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACAGGTTCCCGATGCTGTaGAAGATCCGCCCGCAGATC +
Preference number: 3 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHRFPML*KIRPQI
Trigger: GATCTGCGGGCGGATCTTCAACAGCATCGGGAACCT...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTG +
Preference number: 3 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRQCLSM*TFCANL
Trigger: CAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp ATGGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTaGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGC +
Preference number: 3 (lower is better)
Translates to: MEALVDTLVPHS*QLCASTLSCVS
Trigger: GCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp ATGGAGGAGGCGTCGATGGTGGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTCACCGCGAGCACCTCG +
Preference number: 3 (lower is better)
Translates to: MEEASMVVVSGR*SRSSILTASTS
Trigger: CGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 3 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHTSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp AGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCC +
Preference number: 3 (lower is better)
Translates to: SFTFPNPVSGEH*FCKGRQMRPRP
Trigger: GGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp TACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATaGCACTCGAGTCCACAGCTGCACGGAGCCACGGGT +
Preference number: 3 (lower is better)
Translates to: YLWPPRKTHTSG*HSSPQLHGATG
Trigger: ACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTaGATGGCACTCGAGTCCACAGCTGCACGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: AVPVASPQDSHQ*MALESTAARSH
Trigger: GTGGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp CAGGCTGGACGATGCCAATGGAGGAGGCGTCGATGGTaGTGGTCTCCGGGAGGTGGTCCAGGTCATCGATCC +
Preference number: 3 (lower is better)
Translates to: QAGRCQWRRRRW*WSPGGGPGHRS
Trigger: GGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGTCCAGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GCTCAGGCTGGACGATGCCAATGGAGGAGGCGTCGATaGTGGTGGTCTCCGGGAGGTGGTCCAGGTCATCGA +
Preference number: 3 (lower is better)
Translates to: AQAGRCQWRRRR*WWSPGGGPGHR
Trigger: TCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp TTCCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATaGCACTCGAGTCCACAGCTGCACGGAGCCACGGGT +
Preference number: 3 (lower is better)
Translates to: FLWPPRKTHTSG*HSSPQLHGATG
Trigger: ACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR CCA 72 bp AGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTaGCACAGAACGTTTTCCTGTGGCCTCCCCGCAAGA +
Preference number: 3 (lower is better)
Translates to: SAVPCRTQRGGT*HRTFSCGLPAR
Trigger: TCTTGCGGGGAGGCCACAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR-3UTR CAA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 3 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCCGGCAGGAGAACACCTaGCCACACACCGGGCACCCG +
Preference number: 3 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSRQENT*PHTGHP
Trigger: CGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCCG...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGTACTCCTTGATGCCCTaGTGCAGCTTCATGTGGTGG +
Preference number: 3 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARYSLMP*CSFMWW
Trigger: CCACCACATGAAGCTGCACAAGGGCATCAAGGAGTA...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACCGGCAGGAGAACACCTaGCCACACACCGGGCACCCG +
Preference number: 3 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYRQENT*PHTGHP
Trigger: CGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCCG...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp TGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTTACTGCCTTGGTAAGG +
Preference number: 3 (lower is better)
Translates to: CRANTGSVRGGR*GPGPGLTALVR
Trigger: CCTTACCAAGGCAGTAAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp CCACAGACCAGGATTCACGGGGAGCAGCTGTACCTGTaGCCTCCCCGCAAGACTCACACCAGTGGATGGCAC +
Preference number: 3 (lower is better)
Translates to: PQTRIHGEQLYL*PPRKTHTSGWH
Trigger: GTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGCTCCCCGTGAATCCTGGTCTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GCTGGACGATGCCAATGGAGGAGGCGTCGATGGTGGTaGTCTCCGGGAGGTGGTCCAGGTCATCGATCCTCA +
Preference number: 3 (lower is better)
Translates to: AGRCQWRRRRWW*SPGGGPGHRSS
Trigger: TGAGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCATTGGCATCGTCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp CGTTTTCCTGTGGCCTCCCCGCAAGACTCACACCAGTaGATGGCACTCGAGTCCACAGCTGCACGGAGCCAC +
Preference number: 3 (lower is better)
Translates to: RFPVASPQDSHQ*MALESTAARSH
Trigger: GTGGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGAAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR-3UTR CAA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTATGTACTTCTGCACGTaGGGGTCCGGCAGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: PPAQSHAGHSEAALGTERMYFCT*GSGRFS
Trigger: TGAAAACCTGCCGGACCCCAACGTGCAGAAGTACAT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCACTGTGTGGATGAGCTaGTGGGTCTCCATGGTGTTC +
Preference number: 3 (lower is better)
Translates to: YSLKVASSGTGAPASSSGTVWMS*WVSMVF
Trigger: GAACACCATGGAGACCCACAAGCTCATCCACACAGT...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp GGGCGTGGTAGGTGGCCTTCAGTGCAAAGCGCCGGTTaGAGATGCTGCAGCCATAGCCCTTCTCCTTGTGCA +
Preference number: 3 (lower is better)
Translates to: GRGRWPSVQSAG*RCCSHSPSPCA
Trigger: TGCACAAGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTACCACGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp GTGGATGACCATGTGGGCGTGGTAGGTGGCCTTCAGTaGAAAGCGCCGGTTGCAGATGCTGCAGCCATAGCC +
Preference number: 3 (lower is better)
Translates to: VDDHVGVVGGLQ*KAPVADAAAIA
Trigger: GGCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTACCACGCCCACATGGTCATCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GAGGCTTCCGGCTGGGGGTGGATCTGGACGTCATTTTaGCGGTTGTGCAACATGGCAGAGCCGCTGACGGTA +
Preference number: 3 (lower is better)
Translates to: EASGWGWIWTSF*RLCNMAEPLTV
Trigger: TACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp CAGGGTCGTCAGGTTGATGAAATGGGCCACAGACTGTaGGTTCGAGGCTTCCGGCTGGGGGTGGATCTGGAC +
Preference number: 3 (lower is better)
Translates to: QGRQVDEMGHRL*VRGFRLGVDLD
Trigger: GTCCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAGTGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 3 (lower is better)
Translates to: QCLSMLTFCANLRWHSLHIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...GTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTCCACGCGGAAGAACTaGCGCCCGCAGATCTCGCAG +
Preference number: 3 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHSTRKN*RPQISQ
Trigger: CTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGGA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATGCGCTCTCGTCAGAATaGTCATCGTTTTCTTCCGAG +
Preference number: 3 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHALSSE*SSFSSE
Trigger: CTCGGAAGAAAACGATGACAATTCTGACGAGAGCGC...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTATCCCCGTGTGCCGCTaGCAGTGCTTGAGCATGTTG +
Preference number: 3 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSIPVCR*QCLSML
Trigger: CAACATGCTCAAGCACTGCAAGCGGCACACGGGGAT...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp CTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTaGGATGGGTCCACAGAGCCTGGTGGCCACAATGGC +
Preference number: 3 (lower is better)
Translates to: LHGATGPKRILH*DGSTEPGGHNG
Trigger: GCCATTGTGGCCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR TCA 72 bp GGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATaGGCCTTCCGCCTTTGGATGCCACAAATGGGAACG +
Preference number: 3 (lower is better)
Translates to: GKPKTPPLVGKP*AFRLWMPQMGT
Trigger: CGTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR TCA 72 bp TCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGGTGGCCTTCAGTGCAA +
Preference number: 3 (lower is better)
Translates to: SARWGPAGFHGG*PCGRGRWPSVQ
Trigger: TTGCACTGAAGGCCACCTACCACGCCCACATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp GTCGCCTACACTGCCTGTGAACTCCGTCTCTTTCTCTaGGTATTCGCTGAAGGTGGCGTCCTCGGGCACCGG +
Preference number: 3 (lower is better)
Translates to: VAYTACELRLFL*VFAEGGVLGHR
Trigger: CCGGTGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGAAAGAGACGGAGTTCACAGGCAGTGTAGGCGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp ATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTaGCTTCCACGCCGGACCCTCCAGCGCAGTCCCATG +
Preference number: 3 (lower is better)
Translates to: MPQMGTIEVQEV*LPRRTLQRSPM
Trigger: CATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 72 bp GGTAGGTGGCCTTCAGTGCAAAGCGCCGGTTGCAGATaGTGCAGCCATAGCCCTTCTCCTTGTGCACCTCCA +
Preference number: 3 (lower is better)
Translates to: GRWPSVQSAGCR*CSHSPSPCAPP
Trigger: TGGAGGTGCACAAGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp GTGTGCCGCTTGCAGTGCTTGAGCATGTTGACCTTCTaGGCGAACCTGCGGTGGCACTCCTTGCACTCGTAC +
Preference number: 3 (lower is better)
Translates to: VCRLQCLSMLTF*ANLRWHSLHSY
Trigger: GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCACAC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp CGCCCGCAGATCTCGCAGGTGTACTTCTTGTCGCCGTaGGTGAGCAGGTGCTTGTTCATATTGCTCCGGCAG +
Preference number: 3 (lower is better)
Translates to: RPQISQVYFLSP*VSRCLFILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGAGATCTGCGGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp AAGGTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTaGCGTTCAGGGGTGGTAAGGTGCCCCACGGCCACC +
Preference number: 3 (lower is better)
Translates to: KVTVRIELSSCN*RSGVVRCPTAT
Trigger: GGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GCCACAGACTGTGGGTTCGAGGCTTCCGGCTGGGGGTaGATCTGGACGTCATTTTGGCGGTTGTGCAACATG +
Preference number: 3 (lower is better)
Translates to: ATDCGFEASGWG*IWTSFWRLCNM
Trigger: CATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp AAATGGGCCACAGACTGTGGGTTCGAGGCTTCCGGCTaGGGGTGGATCTGGACGTCATTTTGGCGGTTGTGC +
Preference number: 3 (lower is better)
Translates to: KWATDCGFEASG*GWIWTSFWRLC
Trigger: GCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGCCAGGACTTACTGCCTaGGTAAGGCATGGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRPGLTA*VRHGVE
Trigger: CTCCACACCATGCCTTACCAAGGCAGTAAGTCCTGG...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACAACCTCTCAGTGTTTCTaGTCGTGGGCAGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTTSQCF*SWAAGG
Trigger: CCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGT...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTACCTCTCAGTGTTTCTaGTCGTGGGCAGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFTSQCF*SWAAGG
Trigger: CCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGT...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGGGATGCCTGGAGCACTaGTATCTGGAGAATGGAGAC +
Preference number: 3 (lower is better)
Translates to: AAVPVASPQDSHQWMALEGCLEH*YLENGD
Trigger: GTCTCCATTCTCCAGATACAAGTGCTCCAGGCATCC...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCCTGCGGTGGCACTCCTaGCACTCGTACTCCTTGATG +
Preference number: 3 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFLRWHS*HSYSLM
Trigger: CATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAG...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 3 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFTSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 3 (lower is better)
Translates to: WHSSPQLHGATGPKRILHTSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 3 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAGTGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAG +
Preference number: 3 (lower is better)
Translates to: QCLSMLTFCANLRWHSLHWVSRC*FILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCA...GTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACAGGTTCCCGATGCTGTaGAAGATCCGCCCGCAGATC +
Preference number: 3 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDRFPML*KIRPQI
Trigger: GATCTGCGGGCGGATCTTCAACAGCATCGGGAACCT...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGTTGCACTCGTACTCCTaGATGCCCTTGTGCAGCTTC +
Preference number: 3 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRLHSYS*MPLCSF
Trigger: GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAA...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGAAGGGGCGTGATGGAGTaGACCAGGGTCGTCAGGTTG +
Preference number: 3 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRRGVME*TRVVRL
Trigger: CAACCTGACGACCCTGGTCAACTCCATCACGCCCCT...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp CCGAAGGTGAGCTGGCACCGCTTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTCTCGTCAGAATTGTCA +
Preference number: 3 (lower is better)
Translates to: PKVSWHRLQLYL*GSESALSSELS
Trigger: TGACAATTCTGACGAGAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAAGCGGTGCCAGCTCACCTTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp TGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATGTACTCGGTCACGTAC +
Preference number: 3 (lower is better)
Translates to: WQLCASTLSCVS*TCFCSMYSVTY
Trigger: GTACGTGACCGAGTACATGCTGCAGAAGCACGTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp ACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTaGGCTGAACGTGCTTCTGCAGCATGTACTCGGTCA +
Preference number: 3 (lower is better)
Translates to: TAGSSAPPPCRV*AERASAACTRS
Trigger: TGACCGAGTACATGCTGCAGAAGCACGTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp CCCCTTGCACATGATGACCGTGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCAGCACGCCTCATGGTT +
Preference number: 3 (lower is better)
Translates to: PLAHDDRDDLEG*RIRCGSARLMV
Trigger: AACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATCACGGTCATCATGTGCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 72 bp CCACACTCGGCACACAGGTACTCGCGGACATTGTCGTaGACACGCATGTGCTCCTTCAGCATGTCCTTCCTG +
Preference number: 3 (lower is better)
Translates to: PHSAHRYSRTLS*TRMCSFSMSFL
Trigger: CAGGAAGGACATGCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGAGTGTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp CGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATaGGTCCACAGAGCCTGGTGGCCACAATGGCTGGAT +
Preference number: 3 (lower is better)
Translates to: RSHGSKTNSPLR*VHRAWWPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp GTGATGGAGTTGACCAGGGTCGTCAGGTTGATGAAATaGGCCACAGACTGTGGGTTCGAGGCTTCCGGCTGG +
Preference number: 3 (lower is better)
Translates to: VMELTRVVRLMK*ATDCGFEASGW
Trigger: CCAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTGGTCAACTCCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACCCAGGACTTACTGCCTaGGTAAGGCATGGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDPGLTA*VRHGVE
Trigger: CTCCACACCATGCCTTACCAAGGCAGTAAGTCCTGG...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACCCAGGACTTACTGCCTaGGTAAGGCATGGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHPGLTA*VRHGVE
Trigger: CTCCACACCATGCCTTACCAAGGCAGTAAGTCCTGG...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGCCAGGACTTACTGCCTaGGTAAGGCATGGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGPGLTA*VRHGVE
Trigger: CTCCACACCATGCCTTACCAAGGCAGTAAGTCCTGG...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 3 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCTSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTAGGTGCTTGTTCATATaGCTCCGGCAGGAGAACACC +
Preference number: 3 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFRCLFI*LRQENT
Trigger: GGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCT...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTACTCCTTGATGCCCTaGTGCAGCTTCATGTGGTGG +
Preference number: 3 (lower is better)
Translates to: WHSSPQLHGATGPKRILHYSLMP*CSFMWW
Trigger: CCACCACATGAAGCTGCACAAGGGCATCAAGGAGTA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACCAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTG +
Preference number: 3 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHQCLSM*TFCANL
Trigger: CAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp ACTCTGGCCTGCCAGAGGTCCCTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCTGGCGGGGGATCTGGA +
Preference number: 3 (lower is better)
Translates to: TLACQRSLLELS*QTVMVAGGGSG
Trigger: TCCAGATCCCCCGCCAGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAGGGACCTCTGGCAGGCCAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 72 bp GATGACCGTGATGACCTCGAAGGTTGCAGGATCAGGTaGGGCTCAGCACGCCTCATGGTTTCAGCCCATAGT +
Preference number: 3 (lower is better)
Translates to: DDRDDLEGCRIR*GSARLMVSAHS
Trigger: ACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATCACGGTCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 72 bp AGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAAAACGAATTCTCCACT +
Preference number: 3 (lower is better)
Translates to: RLTPVDGTRVHS*TEPRVQNEFST
Trigger: AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp TCGTACTCCTTGATGCCCTTGTGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTCTTCATGCCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: SYSLMPLCSFMW*RSACLVFMPFP
Trigger: TGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCACATGAAGCTGCACAAGGGCATCAAGGAGTACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGATGAGCCTTCCGCCTTaGGATGCCACAAATGGGAAC +
Preference number: 3 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWMSLPP*DATNGN
Trigger: GTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCAT...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTACTTCTGCACGTaGGGGTCCGGCAGGTTTTCA +
Preference number: 3 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEMYFCT*GSGRFS
Trigger: TGAAAACCTGCCGGACCCCAACGTGCAGAAGTACAT...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAGCACCTCGGGGTGCTaGCGCCGCATGTGTCGGCTC +
Preference number: 3 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRSTSGC*RRMCRL
Trigger: GAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCT...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGGATCTGGACGTCATTTaGGCGGTTGTGCAACATGGC +
Preference number: 3 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWDLDVI*AVVQHG
Trigger: GCCATGTTGCACAACCGCCAAAATGACGTCCAGATC...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp TCGCAGGTGTACTTCTTGTCGCCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGGCAGGAGAACACCTTG +
Preference number: 3 (lower is better)
Translates to: SQVYFLSPWVSR*LFILLRQENTL
Trigger: CAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp CACAGGTACTCGCGGACATTGTCGTGCACACGCATGTaGTCCTTCAGCATGTCCTTCCTGGCAAAGGACTTC +
Preference number: 3 (lower is better)
Translates to: HRYSRTLSCTRM*SFSMSFLAKDF
Trigger: GAAGTCCTTTGCCAGGAAGGACATGCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp TCCATCAACGCGATGTCCTTGAAGTGGACATGGATGTaGTCCCTGAGCACATCCACGCGGAAGAACTTGCGC +
Preference number: 3 (lower is better)
Translates to: SINAMSLKWTWM*SLSTSTRKNLR
Trigger: GCGCAAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGACATCGCGTTGATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp CACGTCCACTGCTTGCCCACTGTGTGGATGAGCTTGTaGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTC +
Preference number: 3 (lower is better)
Translates to: HVHCLPTVWMSL*VSMVFLSLNVF
Trigger: GAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAGCTCATCCACACAGTGGGCAAGCAGTGGACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTCTCTGCGAGGTCATTaGCCCTTTAGATTCTGCAAA +
Preference number: 3 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSSLRGH*PFRFCK
Trigger: TTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGTCTCTGCGAGGTCATTaGCCCTTTAGATTCTGCAAA +
Preference number: 3 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRSLRGH*PFRFCK
Trigger: TTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGA...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTTCCACGCGGAAGAACTaGCGCCCGCAGATCTCGCAG +
Preference number: 3 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTSTRKN*RPQISQ
Trigger: CTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGGA...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACGCGCTCTCGTCAGAATaGTCATCGTTTTCTTCCGAG +
Preference number: 3 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYALSSE*SSFSSE
Trigger: CTCGGAAGAAAACGATGACAATTCTGACGAGAGCGC...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp GCACCGCTTGCAGCTGTACTTGTGAGGCTCCGAGTCTaGGCTCTCGTCAGAATTGTCATCGTTTTCTTCCGA +
Preference number: 3 (lower is better)
Translates to: APLAAVLVRLRV*ALVRIVIVFFR
Trigger: TCGGAAGAAAACGATGACAATTCTGACGAGAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAAGCGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp CACATGAAATCTTTAATCCCCGTGTGCCGCTTGCAGTaGTTGAGCATGTTGACCTTCTGCGCGAACCTGCGG +
Preference number: 3 (lower is better)
Translates to: HMKSLIPVCRLQ*LSMLTFCANLR
Trigger: CCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGATTTCATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp CCTCTTCTGGCTTCTGCTTTCTCTTGTGACTTCGCTTaGCAGCTTTCCCGTGCTTCCCTTCGGCCAAATCCT +
Preference number: 3 (lower is better)
Translates to: PLLASAFSCDFA*QLSRASLRPNP
Trigger: AGGATTTGGCCGAAGGGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGAGAAAGCAGAAGCCAGAAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 3 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTTAAGACAACCCATTTaGCCTCAGACAGTGACCCTA +
Preference number: 3 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFLRQPI*PQTVTL
Trigger: TAGGGTCACTGTCTGAGGCAAAATGGGTTGTCTTAA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACAGGTACTCGCGGACATaGTCGTGCACACGCATGTGC +
Preference number: 3 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYRYSRT*SCTRMC
Trigger: GCACATGCGTGTGCACGACAATGTCCGCGAGTACCT...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTCGGTCACGTACTTCTaGTCGCACACGGAGCACGTC +
Preference number: 3 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASSVTYF*SHTEHV
Trigger: GACGTGCTCCGTGTGCGACAAGAAGTACGTGACCGA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAACGTCATTTTGGCGGTaGTGCAACATGGCAGAGCCG +
Preference number: 3 (lower is better)
Translates to: LPAATCEYCLCSHRNRALTSFWR*CNMAEP
Trigger: CGGCTCTGCCATGTTGCACAACCGCCAAAATGACGT...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp CATGCCAGTGTTTCCTCAAGATGGACTCCCAGTGAGTaGAGGATCTGGGATAACTGGCAAAGCAGGACACCT +
Preference number: 3 (lower is better)
Translates to: HASVSSRWTPSE*RIWDNWQSRTP
Trigger: AGGTGTCCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACTGGGAGTCCATCTTGAGGAAACACTGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp CAGCAAACACATCTAAACAAATCCCAAACATCCCTCTaGAGTTCTTGCCCCGAGTCTCCCGGAACGCAGCTC +
Preference number: 3 (lower is better)
Translates to: QQTHLNKSQTSL*SSCPESPGTQL
Trigger: GAGCTGCGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGATGTTTGGGATTTGTTTAGATGTGTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTaGATTGCAGAGAATCCTGAGACAACCCGGAGGAGC +
Preference number: 3 (lower is better)
Translates to: GFWLGFSQNGYI*IAENPETTRRS
Trigger: GCTCCTCCGGGTTGTCTCAGGATTCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp GAGGAGATCCCGATCTTGCCGATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCGATGTCCTTGAAGTGG +
Preference number: 3 (lower is better)
Translates to: EEIPILPINSSL*WSSINAMSLKW
Trigger: CCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGAAGTGCTGAGAAAGTaGCGTTTTGAAAAACACAAT +
Preference number: 3 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGEVLRK*RFEKHN
Trigger: ATTGTGTTTTTCAAAACGCAACTTTCTCAGCACTTC...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGGATGCCTGGAGCACTaGTATCTGGAGAATGGAGAC +
Preference number: 3 (lower is better)
Translates to: TRDSGWASARMDTFGLQRGCLEH*YLENGD
Trigger: GTCTCCATTCTCCAGATACAAGTGCTCCAGGCATCC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGTGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAG +
Preference number: 3 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLWVSRC*FILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCA...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR GCA 72 bp GTCCCTTCTAGAGTTAAGCTGACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGATACTCTGCAAAGCTA +
Preference number: 3 (lower is better)
Translates to: VPSRVKLTDRNG*WRGIWRYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR GCA 72 bp TGTTTCGTCATGAGCCCAAAGCCCGTTGGGAGTCTCTaGGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCA +
Preference number: 3 (lower is better)
Translates to: CFVMSPKPVGSL*EVICPLDSAKA
Trigger: TGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAACGGGCTTTGGGCTCATGACGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp GACTTTTCCCCCGTTTCTTCCACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGATACATTTGGATTGCAG +
Preference number: 3 (lower is better)
Translates to: DFSPVSSTRDSG*ASARMDTFGLQ
Trigger: CTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACGGGGGAAAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp GAGATCCCGATCTTGCCGATAAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATGTCCTTGAAGTGGACA +
Preference number: 3 (lower is better)
Translates to: EIPILPINSSLW*SSINAMSLKWT
Trigger: TGTCCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATGGCGCAGCGCGTGCTaGGTCTTCATGCCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRWRSAC*VFMPFP
Trigger: TGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACGAGCACGTCCACTGCTaGCCCACTGTGTGGATGAGC +
Preference number: 3 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANEHVHC*PTVWMS
Trigger: GCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTC...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp AGGAATAAAAGATCAATGCTAGTGGGTGTTTCGTCATaGGCCCAAAGCCCGTTGGGAGTCTCTGCGAGGTCA +
Preference number: 3 (lower is better)
Translates to: RNKRSMLVGVSS*AQSPLGVSARS
Trigger: TGACCTCGCAGAGACTCCCAACGGGCTTTGGGCTCATGACGAAACACCCACTAGCATTGATCTTTTATTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp CCTTCTAGAGTTAAGCTGACAGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGT +
Preference number: 3 (lower is better)
Translates to: PSRVKLTDRNGC*RGIWRYSAKLS
Trigger: ACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp GATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATaGACTCCCAGTGAGTGCAGGATCTGGGATAACTGG +
Preference number: 3 (lower is better)
Translates to: DQLLSHASVSSR*TPSECRIWDNW
Trigger: CCAGTTATCCCAGATCCTGCACTCACTGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACACCTCTCAGTGTTTCTaGTCGTGGGCAGCAGGAGGG +
Preference number: 3 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANTSQCF*SWAAGG
Trigger: CCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGT...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTCGCAGGTGTACTTCTaGTCGCCGTGGGTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTSQVYF*SPWVSR
Trigger: CCTGCTCACCCACGGCGACAAGAAGTACACCTGCGA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CCA 72 bp AAGCTGACAGACCGTAATGGTTGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTAAGTCAACCTTACATT +
Preference number: 3 (lower is better)
Translates to: KLTDRNGCWRGI*RYSAKLSQPYI
Trigger: AATGTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGTCAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp ATATATCTTAGGAGCCCTGGTCTCCTGCTGATTCCATaGATGCCTGGAGCACTTGTATCTGGAGAATGGAGA +
Preference number: 3 (lower is better)
Translates to: IYLRSPGLLLIP*MPGALVSGEWR
Trigger: TCTCCATTCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTCCTAAGATATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 3 (lower is better)
Translates to: TAHSVLGAINASISELTSIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 3 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 3 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTGGCGCAGCGCGTGCTaGGTCTTCATGCCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: TAHSVLGAINASISELTSWRSAC*VFMPFP
Trigger: TGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATGCCGCTTGCAGTGCTaGAGCATGTTGACCTTCTGC +
Preference number: 3 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRCRLQC*SMLTFC
Trigger: GCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 3 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTTCGCAGGTGTACTTCTaGTCGCCGTGGGTGAGCAGG +
Preference number: 3 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQISQVYF*SPWVSR
Trigger: CCTGCTCACCCACGGCGACAAGAAGTACACCTGCGA...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTATCCCCGTGTGCCGCTaGCAGTGCTTGAGCATGTTG +
Preference number: 3 (lower is better)
Translates to: TAHSVLGAINASISELTSIPVCR*QCLSML
Trigger: CAACATGCTCAAGCACTGCAAGCGGCACACGGGGAT...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTCCAGGACTTACTGCCTaGGTAAGGCATGGTGTGGAG +
Preference number: 3 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLPGLTA*VRHGVE
Trigger: CTCCACACCATGCCTTACCAAGGCAGTAAGTCCTGG...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAATTGCACTCGTACTCCTaGATGCCCTTGTGCAGCTTC +
Preference number: 3 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKLHSYS*MPLCSF
Trigger: GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAA...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAAACTGTGTGGATGAGCTaGTGGGTCTCCATGGTGTTC +
Preference number: 3 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKTVWMS*WVSMVF
Trigger: GAACACCATGGAGACCCACAAGCTCATCCACACAGT...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: TAHSVLGAINASISELTSEEIPI*PINSSL
Trigger: GAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp CGGGTCACAGCACCTTTTATTCGTCATCATACAACCTaGTGTGACAGGAAATACAGCCAACATCTCCAAACA +
Preference number: 3 (lower is better)
Translates to: RVTAPFIRHHTT*CDRKYSQHLQT
Trigger: TGTTTGGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTGTGACCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CCA 72 bp TATGCAGAACTGCGTATAGGTGAGGACTCTTCTGCCTaGGTGGTACATGGTTGTTGTATTTTGCTATCTAGT +
Preference number: 3 (lower is better)
Translates to: YAELRIGEDSSA*VVHGCCILLSS
Trigger: ACTAGATAGCAAAATACAACAACCATGTACCACCCAGGCAGAAGAGTCCTCACCTATACGCAGTTCTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTATCAACGCGATGTCCTaGAAGTGGACATGGATGTGG +
Preference number: 3 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLINAMS*KWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGTTGAT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLEEIPI*PINSSL
Trigger: GAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR TCA 72 bp CACAGCACCTTTTATTCGTCATCATACAACCTGATGTaGCAGGAAATACAGCCAACATCTCCAAACAGTCTT +
Preference number: 3 (lower is better)
Translates to: HSTFYSSSYNLM*QEIQPTSPNSL
Trigger: AAGACTGTTTGGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 3 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR-3UTR CAA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 3 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATCTCTGCGAGGTCATTaGCCCTTTAGATTCTGCAAA +
Preference number: 3 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSLRGH*PFRFCK
Trigger: TTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAACAAGCCCGAATTCATTaGATGAGACTACTATGTATA +
Preference number: 3 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKQARIH*MRLLCI
Trigger: TATACATAGTAGTCTCATCAAATGAATTCGGGCTTG...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTACATCTGTGCACCTTaGGAATTGAAGTTTAAACAG +
Preference number: 3 (lower is better)
Translates to: LLFVIIQPDVTGNTANISYICAP*ELKFKQ
Trigger: CTGTTTAAACTTCAATTCCAAAGGTGCACAGATGTA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR CCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGGGGGTGCCTGCAGCGTaGACGCCAGAGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRGVPAA*TPEPAC
Trigger: GCAGGCCGGCTCTGGCGTCCACGCTGCAGGCACCCC...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
73% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTGCTGCTGCTCCGCCTaGACCTGGGGCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRCCCSA*TWGWAA
Trigger: GGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACGGGCAGCAGGAGGGCTaGGTGCCTCCCCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHGQQEG*VPPPTL
Trigger: CAGGGTTGGGGGAGGCACCCAGCCCTCCTGCTGCCC...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCTGCTGCTGCTCCGCCTaGACCTGGGGCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: YSLKVASSGTGAPASSSGCCCSA*TWGWAA
Trigger: GGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTCCAGCGCAGTCCCATaGCGGACACAGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRSSAVP*RTQRGG
Trigger: GCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATTGCTCCGCCTGCACCTaGGGCTGGGCCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHCSACT*GWAACC
Trigger: ACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCA...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTGCCGTCAGGTTCTGGTaGTCGGCCTCCGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSAVRFW*SASAAG
Trigger: GCCAGCGGCGGAGGCCGAGCACCAGAACCTGACGGC...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACGTTTTCTGGGGTGCCTaGAGCGTGGACGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHVFWGA*SVDARA
Trigger: GGCTCTGGCGTCCACGCTGCAGGCACCCCAGAAAAC...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCACGTGAGCGGGTGCTaGTCACTAAGCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARHVSGC*SLSWLP
Trigger: GGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTG...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGGGCAAGACGTCAGTCTaGGGCACTGCCCGCCACGTG +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRGKTSV*GTARHV
Trigger: CACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCC...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGCTGCGGCTGCGAGGGTaGCAAGACGTCAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRLRLRG*QDVSLG
Trigger: CCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAG...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CAA 72 bp CGCATGTGTCGGCTCATGGAGGCCCTGGTGGACACCTaGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: RMCRLMEALVDT*VPHSWQLCAST
Trigger: GGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCCGACACATGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATCCCCCGGCCGAAGGTaGGCTGGCACCGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGSPGRR*AGTACS
Trigger: GCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGCGCTGTTTTCTGGGGTaGCTGCAGCGTGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRRCFLG*LQRGRQ
Trigger: CTGGCGTCCACGCTGCAGGCACCCCAGAAAACAGCG...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCCGCACTCCTTCCAGGTaGCGGCGCTGGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGARTPSR*RRWWSS
Trigger: GCTGGACCACCAGCGCCGGCACCTGGAAGGAGTGCG...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGGGGTGGATGTACTTCTaGACGTTGGGGTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARGWMYF*TLGSGR
Trigger: CCTGCCGGACCCCAACGTGCAGAAGTACATCCACCC...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAGTCAGTCTGGGGCACTaGCCGCCACGTGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGVSLGH*PPRERV
Trigger: CACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGAC...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTACACGCCCACTGGCTaGGCTCCGACTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAYTPTG*APTPRG
Trigger: CCCCCGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCACTGCTCGCAGGCGTaGCTCTTCACACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARHCSQA*LFTPVW
Trigger: CCACACAGGTGTGAAGAGCCACGCCTGCGAGCAGTG...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATGGCTCATGGAGGCCCTaGTGGACACCTTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHGSWRP*WTPWSR
Trigger: GCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCC...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTGGAGGAGGCGTCGATaGTGGTGGTCTCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRWRRRR*WWSPGG
Trigger: ACCTCCCGGAGACCACCACCATCGACGCCTCCTCCA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGGCAAGACGTCAGTCTaGGGCACTGCCCGCCACGTG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERGKTSV*GTARHV
Trigger: CACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCATGGATGTGGTCCCTaGGCACATCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHHGCGP*AHPRGR
Trigger: TCTTCCGCGTGGATGTGCTCAGGGACCACATCCATG...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCATCCGCTCCGGAAACTaGGCAGCACCGGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAIRSGN*AAPEAG
Trigger: CCCGGCTTCCGGTGCTGCGCAGTTTCCGGAGCGGAT...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGATCCGGACTCCGGGTTaGGATCCGCTCCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRIRTPG*DPLRKL
Trigger: CAGTTTCCGGAGCGGATCGCAACCCGGAGTCCGGAT...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATCTTCTCGGGAGCTGCTaGCTCGCTTTGGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHLLGSC*LALAAW
Trigger: CCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAG...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCCTCCTTCTCGGGAGCTaGTGCCTCGCTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: YSLKVASSGTGAPASSSGLLLGS*CLALAA
Trigger: GGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAG...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCTCCTTCTCGGGAGCTaGTGCCTCGCTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERLLLGS*CLALAA
Trigger: GGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACGCCGGTTGCAGATGCTaGAGCCATAGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHAGCRC*SHSPSP
Trigger: AGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGC...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGTCGCGGACATTGTCGTaGACACGCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRSRTLS*TRMCSF
Trigger: GAAGGAGCACATGCGTGTGCACGACAATGTCCGCGA...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATAGCCGCGCGACCCTCTaGATCTGGGCAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHSRATL*IWAAVK
Trigger: CTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCT...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCATGATGTGCTTCAGGTACTCCTTCCCCCGGCCGAAGGTGAGCTGGCACCGCTACACGCCCACTGGCTaGGCTCCGACTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHRYTPTG*APTPRG
Trigger: CCCCCGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTA...GCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACCTGAAGCACATCATGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCTCGCTTTGGCTGCCTaGAGGAAGGCTTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRLALAA*RKAFGL
Trigger: CAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAG...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTAGGTGCCGGCGCTGGTaGTCCAGCATGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERRCRRW*SSMTSL
Trigger: CAAGGACGTCATGCTGGACCACCAGCGCCGGCACCT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTTCCAGGTGCCGGCGCTaGTGGTCCAGCATGACGTCC +
Preference number: 4 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSSRCRR*WSSMTS
Trigger: GGACGTCATGCTGGACCACCAGCGCCGGCACCTGGA...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACGGCAGGTTTTCACGGTaGATGACCATGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHGRFSR*MTMWAW
Trigger: CCACGCCCACATGGTCATCCACCGTGAAAACCTGCC...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp CAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTaGGCACAGAACGTTTTCCTGTGGCCTCCCCGCAAG +
Preference number: 4 (lower is better)
Translates to: QRSPMPDTARRH*AQNVFLWPPRK
Trigger: CTTGCGGGGAGGCCACAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR TCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRLQLYL*GSESAL
Trigger: GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTCGAAGCACACGGGGTaGCCGTCCTTCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERSKHTG*PSFWNT
Trigger: GGTGTTCCAGAAGGACGGGCACCCCGTGTGCTTCGA...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAACGCCAGAGCCGGCCTaGTTCAGCATGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGTPEPA*FSMGLS
Trigger: GGACAAGCCCATGCTGAAGCAGGCCGGCTCTGGCGT...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGTGTTCATTGAGGAGCTaGAGCTCCAGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRCSLRS*SSRKVA
Trigger: TGCCACCTTCCTGGAGCTGCAGCTCCTCAATGAACA...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACTTCTCGGGAGCTGCTaGCTCGCTTTGGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGLLGSC*LALAAW
Trigger: CCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCCCCGGGGTGTGTCCTaGTCCTTCTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEPRGVS*SFSGAA
Trigger: AGCAGCTCCCGAGAAGGAGCAGGACACACCCCGGGG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCGTGCCTGCTCAGGTTaGTGCTGTTCTGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRRACSG*CCSGRS
Trigger: AGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACG...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACCATGCGAGCGCACGTaGCTGCTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGPCERT*LLRLLL
Trigger: CAGCAGCAACCTGAGCAGGCACGTGCGCTCGCATGG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGGCAGGAGAACACCTTaGCACACACCGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPGRRTP*HTPGTR
Trigger: CCGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCC...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGGTAGGTGGCCTTCAGTaGAAAGCGCCGGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARVGGLQ*KAPVAD
Trigger: ATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTAC...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCGTGCTTGGTCTTCATaGCTTTCCCACACTCGGCAC +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHRAWSS*LSHTRH
Trigger: GTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACG...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACTCCTTGATGCCCTTGTaGAGCTTCATGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHSLMPL*SFMWWR
Trigger: GCGCCACCACATGAAGCTGCACAAGGGCATCAAGGA...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCACAGCTGGCAGCTCTaGGCCTCCACCTTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERHSWQL*ASTLSC
Trigger: ACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCGCACCTCGGGGTGCTTaGGCCGCATGTGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFAPRGA*AACVGS
Trigger: TGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGGCACCTCGGGGTGCTTaGGCCGCATGTGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: RSARRSRRGGCTSARWGPAPRGA*AACVGS
Trigger: TGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGCTCAGGCTGGACGATaGCAATGGAGGAGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERAQAGR*QWRRRR
Trigger: TCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTCGGCCAAATCCTCCTaGTCCAGAGTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRSAKSS*SRVSSG
Trigger: GCCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTGGGGGTGCCTGCGGCTaGGAGGGTGGCAAGACGTCA +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPGGACG*EGGKTS
Trigger: TGACGTCTTGCCACCCTCGCAGCCGCAGGCACCCCC...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCAGCCGCGCGACCCTCTaGATCTGGGCAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVSRATL*IWAAVK
Trigger: CTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCT...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGACAGACCCTCCTGCATaGTGCCTGGGGATGAACATT +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRTDPPA*CLGMNI
Trigger: AATGTTCATCCCCAGGCAGCATGCAGGAGGGTCTGT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCCCCACAGACCCTCCTaGATGCTGCCTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERPHRPS*MLPGDE
Trigger: TTCATCCCCAGGCAGCATGCAGGAGGGTCTGTGGGG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTCCAGCGCAGTCCCATaGCGGACACAGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSSSAVP*RTQRGG
Trigger: GCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTACTTTACACGCCCACTaGCTGGGCTCCGACTCCACG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERTLHAH*LGSDST
Trigger: CGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTAAAGT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGCTGCTGCCTCGCTTTaGCTGCCTGGAGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERAAASL*LPGGRL
Trigger: AAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCAGATCTCGCAGGGGTaGATGTACTTCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRQISQG*MYFCTL
Trigger: CAACGTGCAGAAGTACATCCACCCCTGCGAGATCTG...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATCACTGCTCGCAGGCGTaGCTCTTCACACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHHCSQA*LFTPVW
Trigger: CCACACAGGTGTGAAGAGCCACGCCTGCGAGCAGTG...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGGGCTCATGGAGGCCCTaGTGGACACCTTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEGSWRP*WTPWSR
Trigger: GCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCC...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGAGAGTCAGCTCAGGCTaGACGATGCCAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARRVSSG*TMPMEE
Trigger: CTCCTCCATTGGCATCGTCCAGCCTGAGCTGACTCT...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGGGCAAGACGTCAGTCTaGGGCACTGCCCGCCACGTG +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEGKTSV*GTARHV
Trigger: CACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCC...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRTRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGGGCAGCAGGAGGGCTaGGTGCCTCCCCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFGQQEG*VPPPTL
Trigger: CAGGGTTGGGGGAGGCACCCAGCCCTCCTGCTGCCC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCATCTTCCAGTCGTCTaGTCTCCAAGTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRHLPVV*SPSWEE
Trigger: TTCCTCCCAACTTGGAGATCAGACGACTGGAAGATG...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGTCTTGTCGCCGTGGGTaGGCAGGTGCTTGTTCATAT +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARSCRRG*AGACSY
Trigger: ATATGAACAAGCACCTGCTCACCCACGGCGACAAGA...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCCCCCGGCCGAAGGTaGGCTGGCACCGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSPGRR*AGTACS
Trigger: GCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACACTGGTACACAGACGTaGCAGCACGTGTCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: GPAQLAALRLHLVVCELNTGTQT*QHVSPH
Trigger: GTGCGGGGACACGTGCTGTCACGTCTGTGTACCAGT...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGTGGGTGTTTCGTCATaGGCCCAAAGCCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERVGVSS*AQSPLG
Trigger: TCCCAACGGGCTTTGGGCTCATGACGAAACACCCAC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATCCGCTCCGGAAACTaGGCAGCACCGGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRIRSGN*AAPEAG
Trigger: CCCGGCTTCCGGTGCTGCGCAGTTTCCGGAGCGGAT...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCTCCTTCTCGGGAGCTaGTGCCTCGCTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALELLLGS*CLALAA
Trigger: GGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTCCATGCGAGCGCACGTaGCTGCTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPPCERT*LLRLLL
Trigger: CAGCAGCAACCTGAGCAGGCACGTGCGCTCGCATGG...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGTGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACCGCACTCCTTCCAGGTaGCGGCGCTGGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: QCLSMLTFCANLRWHSLHRTPSR*RRWWSS
Trigger: GCTGGACCACCAGCGCCGGCACCTGGAAGGAGTGCG...GTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTGGCAGGAGAACACCTTaGCACACACCGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSGRRTP*HTPGTR
Trigger: CCGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCC...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGACCACGCGGAAGAACTTaGGCCCGCAGATCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGPRGRT*ARRSRR
Trigger: CCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGG...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGCCGGTTGCAGATGCTaGAGCCATAGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERAGCRC*SHSPSP
Trigger: AGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTGGTGGCGCAGCGCGTaGTTGGTCTTCATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERWWRSA*LVFMPF
Trigger: GAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCA...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAGCACCTCGGGGTGCTTaGGCCGCATGTGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPAPRGA*AACVGS
Trigger: TGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTGAATGCTCTGTACTaGGGAATTGGTCTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHLNALY*GIGLVA
Trigger: GGCGACGAGACCAATTCCGCAGTACAGAGCATTCAG...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCAGGGGTGGTAAGGTaGCCCACGGCCACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHSGVVR*PTATGW
Trigger: CCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGTGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCAGGGGTGGTAAGGTaGCCCACGGCCACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QCLSMLTFCANLRWHSLHSGVVR*PTATGW
Trigger: CCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGA...GTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATGTCAGTCTGGGGCACTaGCCGCCACGTGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDVSLGH*PPRERV
Trigger: CACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGAC...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCGGGGGTGCCTGCGGCTaGGAGGGTGGCAAGACGTCA +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSGGACG*EGGKTS
Trigger: TGACGTCTTGCCACCCTCGCAGCCGCAGGCACCCCC...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGATGCTGCTGCTCCGCCTaGACCTGGGGCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRCCCSA*TWGWAA
Trigger: GGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTT +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPVRGGR*GPGPGL
Trigger: AAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTAC...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTAGCCGCGCGACCCTCTaGATCTGGGCAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSRATL*IWAAVK
Trigger: CTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCT...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVTRVHS*TEPRVQ
Trigger: TTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTGCAGTCATCCTCGTTaGAGGTGTCGAAGCACACGG +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRCSHPR*RCRSTR
Trigger: CCGTGTGCTTCGACACCTCCAACGAGGATGACTGCA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACACTTTACACGCCCACTaGCTGGGCTCCGACTCCACG +
Preference number: 4 (lower is better)
Translates to: GPAQLAALRLHLVVCELNTLHAH*LGSDST
Trigger: CGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTAAAGT...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCATGATGTGCTTCAGGTACTCCTTCCCCCGGCCGAAGGTGAGCTGGCACCGCCCGAGCTGGTGTCAGTaGTGGTGGTGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHRPSWCQ*WWWPAS
Trigger: GGAAGCTGGCCACCACCACCACTGACACCAGCTCGG...GCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACCTGAAGCACATCATGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTAGGTGCCGGCGCTGGTaGTCCAGCATGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPRCRRW*SSMTSL
Trigger: CAAGGACGTCATGCTGGACCACCAGCGCCGGCACCT...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCGGCCGAAGGTGAGCTaGCACCGCTTGCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALERPKVS*HRLQLY
Trigger: GTACAGCTGCAAGCGGTGCCAGCTCACCTTCGGCCG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATGGCAGGTTTTCACGGTaGATGACCATGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHGRFSR*MTMWAW
Trigger: CCACGCCCACATGGTCATCCACCGTGAAAACCTGCC...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGACSFMW*RSACLV
Trigger: GACCAAGCACGCGCTGCGCCACCACATGAAGCTGCA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCCTGGTGGACACCTTaGTCCCGCACAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSPWWTP*SRTAGS
Trigger: GCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGG...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTGGCTCATGGAGGCCCTaGTGGACACCTTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPGSWRP*WTPWSR
Trigger: GCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCC...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTGCATGTGTCGGCTCATaGAGGCCCTGGTGGACACCT +
Preference number: 4 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSACVGS*RPWWTP
Trigger: AGGTGTCCACCAGGGCCTCCATGAGCCGACACATGC...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTC +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGVVSGR*SRSSIL
Trigger: GAGGATCGATGACCTGGACCACCTCCCGGAGACCAC...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGGCGTCGATGGTGGTaGTCTCCGGGAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFRRRWW*SPGGGP
Trigger: TGGACCACCTCCCGGAGACCACCACCATCGACGCCT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACTTGTCCAGCTGTAACTaGCGTTCAGGGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHLSSCN*RSGVVR
Trigger: CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAA...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCCCCTGCCCCCGAAACTaGTACACAGACGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: YSLKVASSGTGAPASSSGPCPRN*YTDVTA
Trigger: TGCTGTCACGTCTGTGTACCAGTTTCGGGGGCAGGG...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGGGGCAGCAGGAGGGCTaGGTGCCTCCCCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGGQQEG*VPPPTL
Trigger: CAGGGTTGGGGGAGGCACCCAGCCCTCCTGCTGCCC...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGGTCCACAGAGCCTGGTaGCCACAATGGCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRVHRAW*PQWLDL
Trigger: TAGATCCAGCCATTGTGGCCACCAGGCTCTGTGGAC...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTGTCCGCTTGACGAGCTaGGTGATGGCGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPVRLTS*VMANTP
Trigger: GGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGAC...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGTCAACGCGATGTCCTTaGAGTGGACATGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARSTRCP*SGHGCG
Trigger: ACCACATCCATGTCCACTTCAAGGACATCGCGTTGA...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: GPAQLAALRLHLVVCELNGFHGG*PCGRGR
Trigger: CCTACCACGCCCACATGGTCATCCACCGTGAAAACC...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCGCCTACACTGCCTGTaGACTCCGTCTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERRLHCL*TPSLSL
Trigger: CAGAGAAAGAGACGGAGTTCACAGGCAGTGTAGGCG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCACATGGCAGAGCCGCTaGCGGTATCAAAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVTWQSR*RYQRSR
Trigger: CCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGT...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTACATGGCAGAGCCGCTaGCGGTATCAAAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSTWQSR*RYQRSR
Trigger: CCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGT...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCATCCGGACTCCGGGTTaGGATCCGCTCCGGAAACTG +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFIRTPG*DPLRKL
Trigger: CAGTTTCCGGAGCGGATCGCAACCCGGAGTCCGGAT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCGAAGCACACGGGGTaGCCGTCCTTCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALESKHTG*PSFWNT
Trigger: GGTGTTCCAGAAGGACGGGCACCCCGTGTGCTTCGA...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGACGCCAGAGCCGGCCTaGTTCAGCATGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRTPEPA*FSMGLS
Trigger: GGACAAGCCCATGCTGAAGCAGGCCGGCTCTGGCGT...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACTGCCTCGCTTTGGCTaGCTGGAGGAAGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGLPRFG*LEEGFW
Trigger: CCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTCTCCTTCTCGGGAGCTaGTGCCTCGCTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPLLLGS*CLALAA
Trigger: GGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAG...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACACCCCGGGGTGTGTCCTaGTCCTTCTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTPRGVS*SFSGAA
Trigger: AGCAGCTCCCGAGAAGGAGCAGGACACACCCCGGGG...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTCCATGCGAGCGCACGTaGCTGCTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPPCERT*LLRLLL
Trigger: CAGCAGCAACCTGAGCAGGCACGTGCGCTCGCATGG...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCAACAGCTTGTCACCATaGGAGCGCACGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGANSLSP*ERTCLL
Trigger: GAGCAGGCACGTGCGCTCGCATGGTGACAAGCTGTT...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAAACAGCTTGTCACCATaGGAGCGCACGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGNSLSP*ERTCLL
Trigger: GAGCAGGCACGTGCGCTCGCATGGTGACAAGCTGTT...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTCCAGCGCGCTCTCGATaGGGAAGGTCTTCTCACAAG +
Preference number: 4 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSPARSR*GRSSHK
Trigger: CTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGG...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGAACTTCTTGTCGCCGTaGTTCTTCTTGTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRNFLSP*FFLCLE
Trigger: CTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGCCGGTTGCAGATGCTaGAGCCATAGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAAGCRC*SHSPSP
Trigger: AGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGCGAGCACCTCGGGGTaGTTGCGCCGCATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMASTSG*LRRMCR
Trigger: CCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGC...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGGCGAGCACCTCGGGGTaGTTGCGCCGCATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGASTSG*LRRMCR
Trigger: CCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGC...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGCGAGCACCTCGGGGTaGTTGCGCCGCATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCASTSG*LRRMCR
Trigger: CCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGCTGAATGCTCTGTACTaGGGAATTGGTCTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRLNALY*GIGLVA
Trigger: GGCGACGAGACCAATTCCGCAGTACAGAGCATTCAG...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCAGGGGTGGTAAGGTaGCCCACGGCCACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSGVVR*PTATGW
Trigger: CCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGTGCTGTGGGGGTGCCTaGGGCTGCGAGGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWCCGGA*GCEGGK
Trigger: CTTGCCACCCTCGCAGCCGCAGGCACCCCCACAGCA...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTGCTGTGGGGGTGCCTaGGGCTGCGAGGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMCCGGA*GCEGGK
Trigger: CTTGCCACCCTCGCAGCCGCAGGCACCCCCACAGCA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCCCTGCCTTTGGAATGTaGAGAGCGGGATCGGATCCG +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAPAFGM*RAGSDP
Trigger: CGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGG...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGGGGATGACCTTGCCCTaGTTAACACAAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRGMTLP*LTQRSL
Trigger: AAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCC...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTT +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSVRGGR*GPGPGL
Trigger: AAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTAC...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTT +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTVRGGR*GPGPGL
Trigger: AAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTAC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGGGACATTCGGAGTCGTaGTACTGGCTGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRGHSES*YWLQSS
Trigger: TGAAGACTGCAGCCAGTACCACGACTCCGAATGTCC...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTACACGCCCACTGGCTaGGCTCCGACTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEYTPTG*APTPRG
Trigger: CCCCCGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAACTTTACACGCCCACTaGCTGGGCTCCGACTCCACG +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGTLHAH*LGSDST
Trigger: CGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTAAAGT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGCTGCCACTTGCTCTGTaGGTTCCTTGTCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRLPLAL*VPCLPR
Trigger: TCGTGGAAGACAAGGAACCCACAGAGCAAGTGGCAG...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCATGATCCGCTCATCTaGCGTTGCACTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERHDPLI*RCTHRL
Trigger: GAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCGTGTGGATGAGCTTGTaGCGCTCCAGGTTCCCGATG +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVVWMSL*RSRFPM
Trigger: CATCGGGAACCTGGAGCGCCACAAGCTCATCCACAC...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGTGTGGATGAGCTTGTaGCGCTCCAGGTTCCCGATG +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAVWMSL*RSRFPM
Trigger: CATCGGGAACCTGGAGCGCCACAAGCTCATCCACAC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACCCCTGGTGGACACCTTaGTCCCGCACAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHPWWTP*SRTAGS
Trigger: GCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGG...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACGGCTCATGGAGGCCCTaGTGGACACCTTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHGSWRP*WTPWSR
Trigger: GCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCC...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGGCTCATGGAGGCCCTaGTGGACACCTTGGTCCCGC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHGSWRP*WTPWSR
Trigger: GCGGGACCAAGGTGTCCACCAGGGCCTCCATGAGCC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCGCATGTGTCGGCTCATaGAGGCCCTGGTGGACACCT +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFACVGS*RPWWTP
Trigger: AGGTGTCCACCAGGGCCTCCATGAGCCGACACATGC...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAGGCGTCGATGGTGGTaGTCTCCGGGAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPRRRWW*SPGGGP
Trigger: TGGACCACCTCCCGGAGACCACCACCATCGACGCCT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAAGGAGGCGTCGATGGTaGTGGTCTCCGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPRRRRW*WSPGGG
Trigger: ACCACCTCCCGGAGACCACCACCATCGACGCCTCCT...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGCTGGACGATGCCAATaGAGGAGGCGTCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPAGRCQ*RRRRWW
Trigger: CCACCATCGACGCCTCCTCCATTGGCATCGTCCAGC...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTCTTGTGACTTCGCTTaGCAGCTTTCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRSCDFA*QLSRAS
Trigger: GGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGATCTGGACGTCATTTTaGCGGTTGTGCAACATGGCA +
Preference number: 4 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRIWTSF*RLCNMA
Trigger: TGCCATGTTGCACAACCGCCAAAATGACGTCCAGAT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTCGAGGCTTCCGGCTaGGGGTGGATCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEFEASG*GWIWTS
Trigger: TGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAA...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCATGGGCCACAGACTGTaGGTTCGAGGCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFMGHRL*VRGFRL
Trigger: CAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCAT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATGCTGGTCACTAAGCTaGCTCCCCAGGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGCWSLS*LPRGVM
Trigger: CATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGCTGCGGCTGCGAGGGTaGCAAGACGTCAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRLRLRG*QDVSLG
Trigger: CCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAG...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGGCTCAGCACGCCTCATaGTTTCAGCCCATAGTTGTA +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARAQHAS*FQPIVV
Trigger: TACAACTATGGGCTGAAACCATGAGGCGTGCTGAGC...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAGAGCCCAAAGCCCGTTaGGAGTCTCTGCGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGEPKAR*ESLRGH
Trigger: ATGACCTCGCAGAGACTCCCAACGGGCTTTGGGCTC...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp CGAGGCTTCCGGCTGGGGGTGGATCTGGACGTCATTTaGGCGGTTGTGCAACATGGCAGAGCCGCTGACGGT +
Preference number: 4 (lower is better)
Translates to: RGFRLGVDLDVI*AVVQHGRAADG
Trigger: ACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTGTCTCTGGAGGTGGTaGAGTACACGTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALECLWRW*STRRCR
Trigger: ACGGCAGCGACGTGTACTTCACCACCTCCAGAGACA...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTGTCTCTGGAGGTGGTaGAGTACACGTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPCLWRW*STRRCR
Trigger: ACGGCAGCGACGTGTACTTCACCACCTCCAGAGACA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGGGCTCTCTTTGCGGCTaGACAATTTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARGSLCG*TILHTL
Trigger: AAGAGTGTGCAAAATTGTTCAGCCGCAAAGAGAGCC...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGTCTCTGAGTATTCGCTaGAGGTGGCGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: RSARRSRRGGCTSARWGPSLSIR*RWRPRA
Trigger: TGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGA...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACCGCCTACACTGCCTGTaGACTCCGTCTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GPAQLAALRLHLVVCELNRLHCL*TPSLSL
Trigger: CAGAGAAAGAGACGGAGTTCACAGGCAGTGTAGGCG...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TGGCGTTCAGGGGTGGTAAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACACATGGCAGAGCCGCTaGCGGTATCAAAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: WRSGVVRCPTATGWRLVNTWQSR*RYQRSR
Trigger: CCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGT...GTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCGGTAAGGTGAGGAGGTaGGCCCCACAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFGKVRR*APQTLL
Trigger: CAGGAGGGTCTGTGGGGCTCACCTCCTCACCTTACC...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGGTAAGGTGAGGAGGTaGGCCCCACAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFGKVRR*APQTLL
Trigger: CAGGAGGGTCTGTGGGGCTCACCTCCTCACCTTACC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATGGTAAGGTGAGGAGGTaGGCCCCACAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDGKVRR*APQTLL
Trigger: CAGGAGGGTCTGTGGGGCTCACCTCCTCACCTTACC...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGTTTTCTGGGGTGCCTaGAGCGTGGACGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHVFWGA*SVDARA
Trigger: GGCTCTGGCGTCCACGCTGCAGGCACCCCAGAAAAC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACCTTCTCGGGAGCTGCTaGCTCGCTTTGGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHLLGSC*LALAAW
Trigger: CCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAG...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACCCCCGGGGTGTGTCCTaGTCCTTCTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYPRGVS*SFSGAA
Trigger: AGCAGCTCCCGAGAAGGAGCAGGACACACCCCGGGG...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACACGATGACTAGAGGCTaGTCAGCTTTGGACACTTTG +
Preference number: 4 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHTMTRG*SALDTL
Trigger: CAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGT...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTAACAGCTTGTCACCATaGGAGCGCACGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPNSLSP*ERTCLL
Trigger: GAGCAGGCACGTGCGCTCGCATGGTGACAAGCTGTT...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCGTCCACCTCGTTCCTaGTGTGCTTGTAGGAAACGT +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERRPPRS*CACRKR
Trigger: ACGTTTCCTACAAGCACAGCAGGAACGAGGTGGACG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCCAGCGCGCTCTCGATaGGGAAGGTCTTCTCACAAG +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEPARSR*GRSSHK
Trigger: CTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGGGCAGGAGAACACCTTaGCACACACCGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEGRRTP*HTPGTR
Trigger: CCGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCC...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAAGCGCCGGTTGCAGATaGTGCAGCCATAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGSAGCR*CSHSPS
Trigger: AGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCGTAGGTGGCCTTCAGTaGAAAGCGCCGGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVVGGLQ*KAPVAD
Trigger: ATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTAC...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTCGCGGACATTGTCGTaGACACGCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVSRTLS*TRMCSF
Trigger: GAAGGAGCACATGCGTGTGCACGACAATGTCCGCGA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCCGTGCTTGGTCTTCATaGCTTTCCCACACTCGGCAC +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVRAWSS*LSHTRH
Trigger: GTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACG...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCCATGATGTGCTTCAGGTACTCCTTCCCCCGGCCGAAGGTGAGCTGGCACCGCTGGTGGCGCAGCGCGTaGTTGGTCTTCATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHRWWRSA*LVFMPF
Trigger: GAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCA...GCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACCTGAAGCACATCATGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGATCCTTGATGCCCTTGTaGAGCTTCATGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGSLMPL*SFMWWR
Trigger: GCGCCACCACATGAAGCTGCACAAGGGCATCAAGGA...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACGCCTGCTGTGGGGGTaGCTGCGGCTGCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRRLLWG*LRLRGW
Trigger: CCACCCTCGCAGCCGCAGGCACCCCCACAGCAGGCG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTACGCCTGCTGTGGGGGTaGCTGCGGCTGCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALRLLWG*LRLRGW
Trigger: CCACCCTCGCAGCCGCAGGCACCCCCACAGCAGGCG...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATCTGCTGCTGCTGCTaGTCCGCCTGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEICCCC*SACTWG
Trigger: GCCCCAGGTGCAGGCGGAGCAGCAGCAGCAGCAGAT...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGCCATCTCTGACACCTaGCTTTGGAATGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERAISDT*LWNVQS
Trigger: GCTCTGCACATTCCAAAGGCAGGTGTCAGAGATGGC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGAGGTACAGGAGGTCTaGCTTCCACGCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHEVQEV*LPRRTL
Trigger: GAGGGTCCGGCGTGGAAGGCAGACCTCCTGTACCTC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGCTCGGCCTCCGCCGCTaGCCGCACCAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMLGLRR*PHQHHP
Trigger: TGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGAG...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACGGCCTGCTTCAGCATaGGCTTGTCCATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGRPASA*ACPSSW
Trigger: CCAAGAAGATGGACAAGCCCATGCTGAAGCAGGCCG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCACTTTGGAACCGAGCTaGTGTCAGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVTLEPS*CQWWWW
Trigger: CCACCACCACCACTGACACCAGCTCGGTTCCAAAGT...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCTGTCCTGCAGTTGTaGAACTCCAGCGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSVLQL*NSSALS
Trigger: CGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTGTGGGCGTGGTAGGTaGCCTTCAGTGCAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSCGRGR*PSVQSA
Trigger: GGCGCTTTGCACTGAAGGCCACCTACCACGCCCACA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGGCAGGTTTTCACGGTaGATGACCATGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPGRFSR*MTMWAW
Trigger: CCACGCCCACATGGTCATCCACCGTGAAAACCTGCC...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPCSFMW*RSACLV
Trigger: GACCAAGCACGCGCTGCGCCACCACATGAAGCTGCA...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTGCGCGAACCTGCGGTaGCACTCCTTGCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPCANLR*HSLHSY
Trigger: GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTTGGTCCCGCACAGCTaGCAGCTCTGCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMLVPHS*QLCAST
Trigger: GGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTTGGTCCCGCACAGCTaGCAGCTCTGCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTELVPHS*QLCAST
Trigger: GGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGTTGGTCCCGCACAGCTaGCAGCTCTGCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGLVPHS*QLCAST
Trigger: GGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAA...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACCCCTGGTGGACACCTTaGTCCCGCACAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDPWWTP*SRTAGS
Trigger: GCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGG...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGCCCTGGTGGACACCTTaGTCCCGCACAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMPWWTP*SRTAGS
Trigger: GCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGG...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTGCATGTGTCGGCTCATaGAGGCCCTGGTGGACACCT +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSACVGS*RPWWTP
Trigger: AGGTGTCCACCAGGGCCTCCATGAGCCGACACATGC...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAGCATGTGTCGGCTCATaGAGGCCCTGGTGGACACCT +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPACVGS*RPWWTP
Trigger: AGGTGTCCACCAGGGCCTCCATGAGCCGACACATGC...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTC +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPVVSGR*SRSSIL
Trigger: GAGGATCGATGACCTGGACCACCTCCCGGAGACCAC...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTCTGTACTGCGGAATTaGTCTCGTCGCCTACACTGC +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERSVLRN*SRRLHC
Trigger: GCAGTGTAGGCGACGAGACCAATTCCGCAGTACAGA...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGGCTGGGGGTGGATCTaGACGTCATTTTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPGWGWI*TSFWRL
Trigger: CAACCGCCAAAATGACGTCCAGATCCACCCCCAGCC...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGGGCTGGGGGTGGATCTaGACGTCATTTTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: RSARRSRRGGCTSARWGPGWGWI*TSFWRL
Trigger: CAACCGCCAAAATGACGTCCAGATCCACCCCCAGCC...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAATGGGCCACAGACTGTaGGTTCGAGGCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPMGHRL*VRGFRL
Trigger: CAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCAT...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATCACGTGAGCGGGTGCTaGTCACTAAGCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHHVSGC*SLSWLP
Trigger: GGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTG...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACTGCCTTGGTAAGGCATaGTGTGGAGCCCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: GPAQLAALRLHLVVCELNCLGKA*CGAPSS
Trigger: ACTGGATGGGGCTCCACACCATGCCTTACCAAGGCA...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTGGGTCCACAGAGCCTaGTGGCCACAATGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEWVHRA*WPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCA...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATCAAGACTCACACCAGTaGATGGCACTCGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHQDSHQ*MALEST
Trigger: TGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTG...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCCAGCGAGGCGGCACTTaGCACAGAACGTTTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAQRGGT*HRTFSC
Trigger: ACAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTG...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR CAA 72 bp CAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTaGGCACAGAACGTTTTCCTGAGAACACGTCACACG +
Preference number: 4 (lower is better)
Translates to: QRSPMPDTARRH*AQNVFLRTRHT
Trigger: CGTGTGACGTGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp CGGTGGCACTCCTTGCACTCGTACTCCTTGATGCCCTaGTGCAGCTTCATGTGGTGGCGCAGCGCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RWHSLHSYSLMP*CSFMWWRSACL
Trigger: CAAGCACGCGCTGCGCCACCACATGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp GTCGCGGCCGCAGTGGTGATGGGGGTCACGGTGATGTaGGTTAAGCCGACTGAGCTCGATGGTGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: VAAAVVMGVTVM*VKPTELDGVVT
Trigger: TGTGACCACACCATCGAGCTCAGTCGGCTTAACCAACATCACCGTGACCCCCATCACCACTGCGGCCGCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGTCCGCTTGACGAGCTaGGTGATGGCGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCVRLTS*VMANTP
Trigger: GGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGAC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTCAACGCGATGTCCTTaGAGTGGACATGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERSTRCP*SGHGCG
Trigger: ACCACATCCATGTCCACTTCAAGGACATCGCGTTGA...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTGCACTCGTACTCCTTaGTGCCCTTGTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGACTRTP*CPCAAS
Trigger: TGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTGCACTCGTACTCCTTaGTGCCCTTGTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVCTRTP*CPCAAS
Trigger: TGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGTCTCTGAGTATTCGCTaGAGGTGGCGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRSLSIR*RWRPRA
Trigger: TGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGA...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGCCCTGGTCTCCTGCTaGTTCCATGGATGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTALVSC*FHGCLE
Trigger: CTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGCCCTGGTCTCCTGCTaGTTCCATGGATGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHALVSC*FHGCLE
Trigger: CTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTCGAAGCACACGGGGTaGCCGTCCTTCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFSKHTG*PSFWNT
Trigger: GGTGTTCCAGAAGGACGGGCACCCCGTGTGCTTCGA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAGCCGTCAGGTTCTGGTaGTCGGCCTCCGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRAVRFW*SASAAG
Trigger: GCCAGCGGCGGAGGCCGAGCACCAGAACCTGACGGC...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGCCGTCAGGTTCTGGTaGTCGGCCTCCGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWAVRFW*SASAAG
Trigger: GCCAGCGGCGGAGGCCGAGCACCAGAACCTGACGGC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGACGCCAGAGCCGGCCTaGTTCAGCATGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMTPEPA*FSMGLS
Trigger: GGACAAGCCCATGCTGAAGCAGGCCGGCTCTGGCGT...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACCGCTGTTTTCTGGGGTaGCTGCAGCGTGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYRCFLG*LQRGRQ
Trigger: CTGGCGTCCACGCTGCAGGCACCCCAGAAAACAGCG...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGCTGCCTCGCTTTGGCTaGCTGGAGGAAGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRLPRFG*LEEGFW
Trigger: CCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAG...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTCTTCTCGGGAGCTGCTaGCTCGCTTTGGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCLLGSC*LALAAW
Trigger: CCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAG...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGATGATCTCTGCCACTTaGTCTGTGGGTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRMISAT*SVGSLS
Trigger: AGACAAGGAACCCACAGAGCAAGTGGCAGAGATCAT...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGCCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RSARRSRRGGCTSARWGPPWVSR*LFILLR
Trigger: CCGGAGCAATATGAACAAGCACCTGCTCACCCACGG...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGTGAGGCTCCGAGTCTaGGCTCTCGTCAGAATTGTC +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPVRLRV*ALVRIV
Trigger: GACAATTCTGACGAGAGCGCAGACTCGGAGCCTCAC...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTGCACCTCCATGATGTaGTTCAGGTACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGACTSMM*FRYSFP
Trigger: GGGGAAGGAGTACCTGAAGCACATCATGGAGGTGCA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGGGTGGATGTACTTCTaGACGTTGGGGTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTGWMYF*TLGSGR
Trigger: CCTGCCGGACCCCAACGTGCAGAAGTACATCCACCC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCGCGGACATTGTCGTaGACACGCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSRTLS*TRMCSF
Trigger: GAAGGAGCACATGCGTGTGCACGACAATGTCCGCGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCCGTGCTTGGTCTTCATaGCTTTCCCACACTCGGCAC +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFRAWSS*LSHTRH
Trigger: GTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACG...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCCTTGATGCCCTTGTaGAGCTTCATGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSLMPL*SFMWWR
Trigger: GCGCCACCACATGAAGCTGCACAAGGGCATCAAGGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAGCATGTTGACCTTCTaGGCGAACCTGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPSMLTF*ANLRWH
Trigger: GTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTGGCAGCTTTCCCGTaGTTCCCTTCGGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALELAAFP*FPSAKS
Trigger: GGATTTGGCCGAAGGGAAGCACGGGAAAGCTGCCAA...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGCGCCACGTGAGCGGGTaGTGGTCACTAAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTERHVSG*WSLSWL
Trigger: GAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCG...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAGTCAGTCTGGGGCACTaGCCGCCACGTGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARVSLGH*PPRERV
Trigger: CACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGAC...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTCCCAAACATCCCTCTaGAGTTCTTGCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVSQTSL*SSCPES
Trigger: AGACTCGGGGCAAGAACTGCAGAGGGATGTTTGGGA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGCGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: RSARRSRRGGCTSARWGPRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCACAGACCCTCCTGCATaGTGCCTGGGGATGAACATT +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGATDPPA*CLGMNI
Trigger: AATGTTCATCCCCAGGCAGCATGCAGGAGGGTCTGT...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHTRVHS*TEPRVQ
Trigger: TTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFTRVHS*TEPRVQ
Trigger: TTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGAGAGGTACAGGAGGTCTaGCTTCCACGCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGREVQEV*LPRRTL
Trigger: GAGGGTCCGGCGTGGAAGGCAGACCTCCTGTACCTC...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCCCGTGCTTCTTCTTGTaGTTGGAGAGGTTGCTGGTA +
Preference number: 4 (lower is better)
Translates to: YSLKVASSGTGAPASSSGPCFFL*LERLLV
Trigger: TACCAGCAACCTCTCCAAGCACAAGAAGAAGCACGG...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATCGGAGTCGTGGTACTaGCTGCAGTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGSESWY*LQSSHQ
Trigger: CTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCGGCCTGCTTCAGCATaGGCTTGTCCATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALERPASA*ACPSSW
Trigger: CCAAGAAGATGGACAAGCCCATGCTGAAGCAGGCCG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATACACGCCCACTGGCTaGGCTCCGACTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARYTPTG*APTPRG
Trigger: CCCCCGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCATGATCCGCTCATCTaGCGTTGCACTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEHDPLI*RCTHRL
Trigger: GAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGCCGAGCTGGTGTCAGTaGTGGTGGTGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMPSWCQ*WWWPAS
Trigger: GGAAGCTGGCCACCACCACCACTGACACCAGCTCGG...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGCCGAGCTGGTGTCAGTaGTGGTGGTGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWPSWCQ*WWWPAS
Trigger: GGAAGCTGGCCACCACCACCACTGACACCAGCTCGG...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTACTTCTTGTCGCCGTaGGTGAGCAGGTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTCACCCACGGCGACAAGAAGTA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACTACTTCTTGTCGCCGTaGGTGAGCAGGTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: GPAQLAALRLHLVVCELNYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTCACCCACGGCGACAAGAAGTA...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERNSSLW*SSINAM
Trigger: CATCGCGTTGATGGATGACCACCAGAGGGAAGAGTT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATG +
Preference number: 4 (lower is better)
Translates to: YSLKVASSGTGAPASSSGNSSLW*SSINAM
Trigger: CATCGCGTTGATGGATGACCACCAGAGGGAAGAGTT...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGACGGCCGAAGGTGAGCTaGCACCGCTTGCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRRPKVS*HRLQLY
Trigger: GTACAGCTGCAAGCGGTGCCAGCTCACCTTCGGCCG...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACCGGCCGAAGGTGAGCTaGCACCGCTTGCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDRPKVS*HRLQLY
Trigger: GTACAGCTGCAAGCGGTGCCAGCTCACCTTCGGCCG...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTGTACTTCTGCACGTTaGGGTCCGGCAGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGACTSAR*GPAGFH
Trigger: GTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGATGTACTTCTGCACGTTaGGGTCCGGCAGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGCTSAR*GPAGFH
Trigger: GTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACA...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTGTGTGGATGAGCTTGTaGCGCTCCAGGTTCCCGATG +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPVWMSL*RSRFPM
Trigger: CATCGGGAACCTGGAGCGCCACAAGCTCATCCACAC...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGGCGCAGCGCGTGCTTaGTCTTCATGCCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHGAARA*SSCLSH
Trigger: GTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGGCGCAGCGCGTGCTTaGTCTTCATGCCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFGAARA*SSCLSH
Trigger: GTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACGCATGTGTCGGCTCATaGAGGCCCTGGTGGACACCT +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHACVGS*RPWWTP
Trigger: AGGTGTCCACCAGGGCCTCCATGAGCCGACACATGC...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGAAGGCGTCGATGGTGGTaGTCTCCGGGAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRRRRWW*SPGGGP
Trigger: TGGACCACCTCCCGGAGACCACCACCATCGACGCCT...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTGGAGGAGGCGTCGATaGTGGTGGTCTCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMWRRRR*WWSPGG
Trigger: ACCTCCCGGAGACCACCACCATCGACGCCTCCTCCA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGCTGGACGATGCCAATaGAGGAGGCGTCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHAGRCQ*RRRRWW
Trigger: CCACCATCGACGCCTCCTCCATTGGCATCGTCCAGC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTCTTGTGACTTCGCTTaGCAGCTTTCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGASCDFA*QLSRAS
Trigger: GGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTCTGTACTGCGGAATTaGTCTCGTCGCCTACACTGC +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVSVLRN*SRRLHC
Trigger: GCAGTGTAGGCGACGAGACCAATTCCGCAGTACAGA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTCTGAGCTCGATGGTGTaGTCACATTTGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSLSSMV*SHLGHP
Trigger: TGGGTGACCCAAATGTGACCACACCATCGAGCTCAG...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTGCTTCCGGCTGGGGGTaGATCTGGACGTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSASGWG*IWTSFW
Trigger: CCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGC...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTTCGAGGCTTCCGGCTaGGGGTGGATCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHFEASG*GWIWTS
Trigger: TGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAA...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGCTGGTCACTAAGCTaGCTCCCCAGGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHCWSLS*LPRGVM
Trigger: CATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGATGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCTGCCTTGGTAAGGCATaGTGTGGAGCCCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFCLGKA*CGAPSS
Trigger: ACTGGATGGGGCTCCACACCATGCCTTACCAAGGCA...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGCCGCACACGCAGACCTaGCTGTTCACCGCACATTCA +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRPHTQT*LFTAHS
Trigger: TGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGG...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTAGTGAGTGCAGGATCTaGGATAACTGGCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERSECRI*DNWQSR
Trigger: CCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCATCCTTTGTTCTGCTaGCAACATCAGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERHPLFC*QHQDCS
Trigger: GGAGCAGTCCTGATGTTGCCAGCAGAACAAAGGATG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAAGACTCACACCAGTaGATGGCACTCGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGQDSHQ*MALEST
Trigger: TGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACCTTTCACAATCCAATaGGAAAGCCCAAGACGCCGC +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGPFTIQ*ESPRRR
Trigger: GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATGCTGTCCTGCAGTTGTaGAACTCCAGCGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDAVLQL*NSSALS
Trigger: CGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGC...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441787.5
3UTR CAA 72 bp CCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTaGATGAAATGGGCCACAGACTGTGGGTTCGAGGCT +
Preference number: 4 (lower is better)
Translates to: PRGVMELTRVVR*MKWATDCGFEA
Trigger: AGCCTCGAACCCACAGTCTGTGGCCCATTTCATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTGTCTCTGGAGGTGGTaGAGTACACGTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTCLWRW*STRRCR
Trigger: ACGGCAGCGACGTGTACTTCACCACCTCCAGAGACA...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCCCAGAACCAGCTCCATaGTCCGCTCATCTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFPEPAP*SAHLAL
Trigger: CAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGG...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATCCAGAACCAGCTCCATaGTCCGCTCATCTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHPEPAP*SAHLAL
Trigger: CAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGG...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACGCTGGTGGTCCAGCATaGCGTCCTTGCGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHAGGPA*RPCGRT
Trigger: TGTTCTACCGCAAGGACGTCATGCTGGACCACCAGC...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATCTTGTCGCCGTGGGTaGGCAGGTGCTTGTTCATAT +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGSCRRG*AGACSY
Trigger: ATATGAACAAGCACCTGCTCACCCACGGCGACAAGA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTCATGGATGTGGTCCCTaGGCACATCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFHGCGP*AHPRGR
Trigger: TCTTCCGCGTGGATGTGCTCAGGGACCACATCCATG...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCCATGGATGTGGTCCCTaGGCACATCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFHGCGP*AHPRGR
Trigger: TCTTCCGCGTGGATGTGCTCAGGGACCACATCCATG...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCCTTGTGCACCTCCATaGTGTGCTTCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEPCAPP*CASGTP
Trigger: AGGAGTACCTGAAGCACATCATGGAGGTGCACAAGG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHGFHGG*PCGRGR
Trigger: CCTACCACGCCCACATGGTCATCCACCGTGAAAACC...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCGGTTCCCGATGCTGTTaGAGATCCGCCCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFGSRCC*RSARRS
Trigger: AGATCTGCGGGCGGATCTTCAACAGCATCGGGAACC...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCTGCCCACTGTGTGGATaGGCTTGTGGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSCPLCG*ACGSPW
Trigger: CCATGGAGACCCACAAGCTCATCCACACAGTGGGCA...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTCTCTGAGTATTCGCTaGAGGTGGCGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTSLSIR*RWRPRA
Trigger: TGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGA...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGCTCCGTCTCTTTCTCTaGGTATTCGCTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RSARRSRRGGCTSARWGPLRLFL*VFAEGG
Trigger: GCCACCTTCAGCGAATACTCAGAGAAAGAGACGGAG...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATTGAGCTGGAGTCAGTaGCCTCACGTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTLSWSQ*PHVTPC
Trigger: GCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CAGTGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTTGAGCTGGAGTCAGTaGCCTCACGTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: QCLSMLTFCANLRWHSLHLSWSQ*PHVTPC
Trigger: GCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAA...GTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTGAGCTGGAGTCAGTaGCCTCACGTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHLSWSQ*PHVTPC
Trigger: GCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGCCGCTCATCTGGCGTTaGACTCACAGGCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGPLIWR*THRLIR
Trigger: CCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGG...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACCCGCTCATCTGGCGTTaGACTCACAGGCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDPLIWR*THRLIR
Trigger: CCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGG...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGCCGCTCATCTGGCGTTaGACTCACAGGCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEPLIWR*THRLIR
Trigger: CCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGG...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCCGTGCCTGCTCAGGTTaGTGCTGTTCTGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFRACSG*CCSGRS
Trigger: AGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACG...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACCGTGCTTCTTCTTGTaGTTGGAGAGGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGPCFFL*LERLLL
Trigger: CAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR GCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTGCGGTAGAACATCTTaGTGCAGACCTCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVCGRTS*CRPHRQ
Trigger: TTGCCTGTGAGGTCTGCAGCAAGATGTTCTACCGCA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGATGCGGTAGAACATCTTaGTGCAGACCTCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGCGRTS*CRPHRQ
Trigger: TTGCCTGTGAGGTCTGCAGCAAGATGTTCTACCGCA...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGCGCACTCCTTCCAGGTaGCGGCGCTGGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWRTPSR*RRWWSS
Trigger: GCTGGACCACCAGCGCCGGCACCTGGAAGGAGTGCG...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGCCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRPWVSR*LFILLR
Trigger: CCGGAGCAATATGAACAAGCACCTGCTCACCCACGG...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGCCACGCGGAAGAACTTaGGCCCGCAGATCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMPRGRT*ARRSRR
Trigger: CCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGG...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCCATGATGTGCTTCAGGTACTCCTTCCCCCGGCCGAAGGTGAGCTGGCACCGCTGCACCTCCATGATGTaGTTCAGGTACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHRCTSMM*FRYSFP
Trigger: GGGGAAGGAGTACCTGAAGCACATCATGGAGGTGCA...GCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACCTGAAGCACATCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTGCACCTCCATGATGTaGTTCAGGTACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPCTSMM*FRYSFP
Trigger: GGGGAAGGAGTACCTGAAGCACATCATGGAGGTGCA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCAGCGCCGGTTGCAGATaGTGCAGCCATAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSSAGCR*CSHSPS
Trigger: AGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCT...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGTGCAAAGCGCCGGTTaGAGATGCTGCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFVQSAG*RCCSHS
Trigger: GCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCAC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGTGCAAAGCGCCGGTTaGAGATGCTGCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTVQSAG*RCCSHS
Trigger: GCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCAC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTGTAGGTGGCCTTCAGTaGAAAGCGCCGGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPVGGLQ*KAPVAD
Trigger: ATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTAC...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGAGGGTGGATGTACTTCTaGACGTTGGGGTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRGWMYF*TLGSGR
Trigger: CCTGCCGGACCCCAACGTGCAGAAGTACATCCACCC...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGGTGGCGCAGCGCGTaGTTGGTCTTCATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHWWRSA*LVFMPF
Trigger: GAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACCCTTCTGCGCGAACCTaGGGTGGCACTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYPSART*GGTPCT
Trigger: AGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGG...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTAGCATGTTGACCTTCTaGGCGAACCTGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFSMLTF*ANLRWH
Trigger: GTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCT...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGCATGTTGACCTTCTaGGCGAACCTGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHSMLTF*ANLRWH
Trigger: GTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTCACAGCTGGCAGCTCTaGGCCTCCACCTTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCHSWQL*ASTLSC
Trigger: ACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTG...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCGGCCAAATCCTCCTaGTCCAGAGTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHSAKSS*SRVSSG
Trigger: GCCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTATCAGGGGTGGTAAGGTaGCCCACGGCCACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALSGVVR*PTATGW
Trigger: CCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGA...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGACGCCACGTGAGCGGGTaGTGGTCACTAAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRRHVSG*WSLSWL
Trigger: GAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCG...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCGCCTGCTGTGGGGGTaGCTGCGGCTGCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTRLLWG*LRLRGW
Trigger: CCACCCTCGCAGCCGCAGGCACCCCCACAGCAGGCG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACCGCCTGCTGTGGGGGTaGCTGCGGCTGCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHRLLWG*LRLRGW
Trigger: CCACCCTCGCAGCCGCAGGCACCCCCACAGCAGGCG...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCTGCTGCTCCGCCTaGACCTGGGGCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDCCCSA*TWGWAA
Trigger: GGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCCCAAACATCCCTCTaGAGTTCTTGCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSQTSL*SSCPES
Trigger: AGACTCGGGGCAAGAACTGCAGAGGGATGTTTGGGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGCCTGCCTTTGGAATGTaGAGAGCGGGATCGGATCCG +
Preference number: 4 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRPAFGM*RAGSDP
Trigger: CGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGG...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGGCCATCTCTGACACCTaGCTTTGGAATGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEAISDT*LWNVQS
Trigger: GCTCTGCACATTCCAAAGGCAGGTGTCAGAGATGGC...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGGGATGACCTTGCCCTaGTTAACACAAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERGMTLP*LTQRSL
Trigger: AAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACCCCCACAGACCCTCCTaGATGCTGCCTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHPHRPS*MLPGDE
Trigger: TTCATCCCCAGGCAGCATGCAGGAGGGTCTGTGGGG...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTATCCAGCGCAGTCCCATaGCGGACACAGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALSSAVP*RTQRGG
Trigger: GCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGA...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTTTGACCATGACCACTaGGCCCAGCTCGGGACATTC +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSFDHDH*AQLGTF
Trigger: GAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAATTTGGCGACCCTCCTaGACTCAAAGGGACCGAACT +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGIWRPS*TQRDRT
Trigger: AGTTCGGTCCCTTTGAGTCCAGGAGGGTCGCCAAAT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCATGATGTGCTTCAGGTACTCCTTCCCCCGGCCGAAGGTGAGCTGGCACCGCATTTGGCGACCCTCCTaGACTCAAAGGGACCGAACT +
Preference number: 4 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHRIWRPS*TQRDRT
Trigger: AGTTCGGTCCCTTTGAGTCCAGGAGGGTCGCCAAAT...GCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACCTGAAGCACATCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTACTCGGCCTCCGCCGCTaGCCGCACCAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALLGLRR*PHQHHP
Trigger: TGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGAG...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATGGGGTGCCTGCAGCGTaGACGCCAGAGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDGVPAA*TPEPAC
Trigger: GCAGGCCGGCTCTGGCGTCCACGCTGCAGGCACCCC...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTCTTCTGTTCTTTGGTaGCAACATTCTCGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERSSVLW*QHSRSR
Trigger: CCGAGAGCGAGAATGTTGCCACCAAAGAACAGAAGA...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCCAGCTTTGGACACTTTaGGTTTTCTCCCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVQLWTL*VFSPFE
Trigger: CTCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTG...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCTGCCACTTGCTCTGTaGGTTCCTTGTCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALELPLAL*VPCLPR
Trigger: TCGTGGAAGACAAGGAACCCACAGAGCAAGTGGCAG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTGTCAGTGGTGGTGGTaGCCAGCTTCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTCQWWW*PASPEP
Trigger: TGGTTCTGGGGAAGCTGGCCACCACCACCACTGACA...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAACTTTGGAACCGAGCTaGTGTCAGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPTLEPS*CQWWWW
Trigger: CCACCACCACCACTGACACCAGCTCGGTTCCAAAGT...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGATCCTTGAAGTGGACATaGATGTGGTCCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGSLKWT*MWSLST
Trigger: TGTGCTCAGGGACCACATCCATGTCCACTTCAAGGA...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGTGGGCGTGGTAGGTaGCCTTCAGTGCAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRCGRGR*PSVQSA
Trigger: GGCGCTTTGCACTGAAGGCCACCTACCACGCCCACA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACGGCAGGTTTTCACGGTaGATGACCATGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHGRFSR*MTMWAW
Trigger: CCACGCCCACATGGTCATCCACCGTGAAAACCTGCC...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCGTGTGGATGAGCTTGTaGCGCTCCAGGTTCCCGATG +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFVWMSL*RSRFPM
Trigger: CATCGGGAACCTGGAGCGCCACAAGCTCATCCACAC...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGCACTGCTCGCAGGCGTaGCTCTTCACACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMHCSQA*LFTPVW
Trigger: CCACACAGGTGTGAAGAGCCACGCCTGCGAGCAGTG...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHCSFMW*RSACLV
Trigger: GACCAAGCACGCGCTGCGCCACCACATGAAGCTGCA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTTGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCCSFMW*RSACLV
Trigger: GACCAAGCACGCGCTGCGCCACCACATGAAGCTGCA...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACGGCTGGGGGTGGATCTaGACGTCATTTTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHGWGWI*TSFWRL
Trigger: CAACCGCCAAAATGACGTCCAGATCCACCCCCAGCC...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGCTTCCGGCTGGGGGTaGATCTGGACGTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTASGWG*IWTSFW
Trigger: CCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGTCAGGTTGATGAAATaGGCCACAGACTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAVRLMK*ATDCGF
Trigger: GAACCCACAGTCTGTGGCCCATTTCATCAACCTGAC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGTGCTGGTCACTAAGCTaGCTCCCCAGGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGCWSLS*LPRGVM
Trigger: CATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCA...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTGCTCCGCCTGCACCTaGGGCTGGGCCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYCSACT*GWAACC
Trigger: ACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCGTTCAGGGGTGGTAAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTCTGACACCTGCCTTTaGAATGTGCAGAGCGGGATC +
Preference number: 4 (lower is better)
Translates to: WRSGVVRCPTATGWRLVNSDTCL*NVQSGI
Trigger: GATCCCGCTCTGCACATTCCAAAGGCAGGTGTCAGA...GTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACCGGGGCGACCCTCTGCATCTaGGCAGCTGTGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: SRCLFILLRQENTLPHTGATLCI*AAVKGG
Trigger: TCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGC...CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCGTTCAGGGGTGGTAAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTTCCACTCGGGATTCTaGCTGGGCTTCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WRSGVVRCPTATGWRLVNFHSGF*LGFSQN
Trigger: ATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA...GTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCAGTGAGTGCAGGATCTaGGATAACTGGCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGASECRI*DNWQSR
Trigger: CCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACT...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCGAGCCCAAAGCCCGTTaGGAGTCTCTGCGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSEPKAR*ESLRGH
Trigger: ATGACCTCGCAGAGACTCCCAACGGGCTTTGGGCTC...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCGCCTGGTGGCCACAATaGCTGGATCTAATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFAWWPQ*LDLMSS
Trigger: GGAAGACATTAGATCCAGCCATTGTGGCCACCAGGC...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCTGGGTCCACAGAGCCTaGTGGCCACAATGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFWVHRA*WPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCA...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTACTCACACCAGTGGATaGCACTCGAGTCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSTHTSG*HSSPQL
Trigger: CAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGT...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGGAGCAGCTGTACCTGTaGCCTCCCCGCAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWEQLYL*PPRKTH
Trigger: GTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGCTC...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGAGCAGCTGTACCTGTaGCCTCCCCGCAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCEQLYL*PPRKTH
Trigger: GTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGCTC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGACCTGTCCTGCAGTTGTaGAACTCCAGCGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRPVLQL*NSSALS
Trigger: CGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGG...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422911.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTCCTTGTCTTCCACGATaGCTAGAGGCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPPCLPR*LEAAQL
Trigger: AAGCTGAGCAGCCTCTAGTCATCGTGGAAGACAAGG...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCACCTTGTCTTCCACGATaGCTAGAGGCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPPCLPR*LEAAQL
Trigger: AAGCTGAGCAGCCTCTAGTCATCGTGGAAGACAAGG...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTGGCTCTCTTTGCGGCTaGACAATTTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSGSLCG*TILHTL
Trigger: AAGAGTGTGCAAAATTGTTCAGCCGCAAAGAGAGCC...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTGGTGGAGAAGAATCTaGAACACATCTCACATTGGA +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRWWRRI*NTSHIG
Trigger: TCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR TCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGCTGGTGGTCCAGCATaGCGTCCTTGCGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCAGGPA*RPCGRT
Trigger: TGTTCTACCGCAAGGACGTCATGCTGGACCACCAGC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGCATGGATGTGGTCCCTaGGCACATCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGHGCGP*AHPRGR
Trigger: TCTTCCGCGTGGATGTGCTCAGGGACCACATCCATG...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTTCCCCCGGCCGAAGGTaGGCTGGCACCGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTSPGRR*AGTACS
Trigger: GCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGA...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGGFHGG*PCGRGR
Trigger: CCTACCACGCCCACATGGTCATCCACCGTGAAAACC...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWGFHGG*PCGRGR
Trigger: CCTACCACGCCCACATGGTCATCCACCGTGAAAACC...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGGTTCCCGATGCTGTTaGAGATCCGCCCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCGSRCC*RSARRS
Trigger: AGATCTGCGGGCGGATCTTCAACAGCATCGGGAACC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTGCACTCGTACTCCTTaGTGCCCTTGTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPCTRTP*CPCAAS
Trigger: TGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTGCCCACTGTGTGGATaGGCTTGTGGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHCPLCG*ACGSPW
Trigger: CCATGGAGACCCACAAGCTCATCCACACAGTGGGCA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPLSCVS*TCFCSM
Trigger: CATGCTGCAGAAGCACGTTCAGCTCACACACGACAA...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGGAGATTGGTAAACTaGGTCGCGGCCGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRWRLVN*VAAAVV
Trigger: CACCACTGCGGCCGCGACTCAGTTTACCAATCTCCA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CACTTGGCACAGAACGTTTTCCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGAGATTGGTAAACTaGGTCGCGGCCGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: HLAQNVFLWPPRKTHTSGWRLVN*VAAAVV
Trigger: CACCACTGCGGCCGCGACTCAGTTTACCAATCTCCA...TCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGAAAACGTTCTGTGCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR TCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGACATGGCAGAGCCGCTaGCGGTATCAAAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTETWQSR*RYQRSR
Trigger: CCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGT...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTTTGAGCTGGAGTCAGTaGCCTCACGTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCLSWSQ*PHVTPC
Trigger: GCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAA...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCACTATTCATTCAACTaGGAGGTGAGAGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEHYSFN*EVRARR
Trigger: GCGCCTAGCTCTCACCTCTCAGTTGAATGAATAGTG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCCACTATTCATTCAACTaGGAGGTGAGAGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFHYSFN*EVRARR
Trigger: GCGCCTAGCTCTCACCTCTCAGTTGAATGAATAGTG...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGGTGGGTGTTTCGTCATaGGCCCAAAGCCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWVGVSS*AQSPLG
Trigger: TCCCAACGGGCTTTGGGCTCATGACGAAACACCCAC...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAGAACTGCGTATAGGTaGGGACTCTTCTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPRTAYR*GLFCLG
Trigger: ACCCAGGCAGAAGAGTCCTCACCTATACGCAGTTCT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTAAACGAATTCTCCACTaGGATGGGTCCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPKRILH*DGSTEP
Trigger: AGGCTCTGTGGACCCATCTCAGTGGAGAATTCGTTT...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGCTAGTGGGGAAGCCATaGGCCTTCCGCCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTELVGKP*AFRLWM
Trigger: CATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAG...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACCTAGTGGGGAAGCCATaGGCCTTCCGCCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHLVGKP*AFRLWM
Trigger: CATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAG...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTCCAGCATCATCCAGTTaGAGTCATCCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPPASSS*SHPRWR
Trigger: CCTCCAACGAGGATGACTGCAACTGGATGATGCTGG...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGCTGCCTCGCTTTGGCTaGCTGGAGGAAGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMLPRFG*LEEGFW
Trigger: CCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAG...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCCATGATGTGCTTCAGGTACTCCTTCCCCCGGCCGAAGGTGAGCTGGCACCGCCTCGGTAATGATCTCTaGCACTTGCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHRLGNDL*HLLCGF
Trigger: GAACCCACAGAGCAAGTGGCAGAGATCATTACCGAG...GCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACCTGAAGCACATCATGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGGCCGCTCATCTGGCGTTaGACTCACAGGCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: VTVRIELSSCNWRSGVVRPLIWR*THRLIR
Trigger: CCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGG...CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGCCGCTCATCTGGCGTTaGACTCACAGGCTCATCCGG +
Preference number: 4 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMPLIWR*THRLIR
Trigger: CCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGG...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGAGGTCTTCTCACAAGTaGCGCAGCGGTACCTGTACT +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRRSSHK*RSGTCT
Trigger: AGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCT...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACGCACTCCTTCCAGGTaGCGGCGCTGGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRRTPSR*RRWWSS
Trigger: GCTGGACCACCAGCGCCGGCACCTGGAAGGAGTGCG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCGCACTCCTTCCAGGTaGCGGCGCTGGTGGTCCAGC +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLRTPSR*RRWWSS
Trigger: GCTGGACCACCAGCGCCGGCACCTGGAAGGAGTGCG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGGGTGCTTGTTCATATTaGTCCGGCAGGAGAACACCT +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEGACSY*SGRRTP
Trigger: AGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACC...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTPWVSR*LFILLR
Trigger: CCGGAGCAATATGAACAAGCACCTGCTCACCCACGG...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CACTTGGCACAGAACGTTTTCCTGTGGCCTCCCCGCAAGACTCACACCAGTGGAAGCGCCGGTTGCAGATaGTGCAGCCATAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: HLAQNVFLWPPRKTHTSGSAGCR*CSHSPS
Trigger: AGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCT...TCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGAAAACGTTCTGTGCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATCGTGCACACGCATGTaGTCCTTCAGCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPSCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAGGAGCACATGCGTGTGCACGA...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGTCGTGCACACGCATGTaGTCCTTCAGCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRSCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAGGAGCACATGCGTGTGCACGA...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAGTGTGCCGCTTGCAGTaGTTGAGCATGTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPVCRLQ*LSMLTF
Trigger: GAAGGTCAACATGCTCAAGCACTGCAAGCGGCACAC...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTCTTTAATCCCCGTGTaGCGCTTGCAGTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPSLIPV*RLQCLS
Trigger: GCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGACGGAGCACGTCCACTaGTTGCCCACTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGTEHVH*LPTVWM
Trigger: CATCCACACAGTGGGCAAGCAGTGGACGTGCTCCGT...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGCGAGCACCTCGGGGTaGTTGCGCCGCATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYASTSG*LRRMCR
Trigger: CCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTTGGCAGCTTTCCCGTaGTTCCCTTCGGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHLAAFP*FPSAKS
Trigger: GGATTTGGCCGAAGGGAAGCACGGGAAAGCTGCCAA...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATCAGGGGTGGTAAGGTaGCCCACGGCCACCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRSGVVR*PTATGW
Trigger: CCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGGGGGTGCCTGCGGCTaGGAGGGTGGCAAGACGTCA +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRGGACG*EGGKTS
Trigger: TGACGTCTTGCCACCCTCGCAGCCGCAGGCACCCCC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCGGGGGTGCCTGCGGCTaGGAGGGTGGCAAGACGTCA +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLGGACG*EGGKTS
Trigger: TGACGTCTTGCCACCCTCGCAGCCGCAGGCACCCCC...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGCCTGCCTTTGGAATGTaGAGAGCGGGATCGGATCCG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGPAFGM*RAGSDP
Trigger: CGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGG...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGGCCATCTCTGACACCTaGCTTTGGAATGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRAISDT*LWNVQS
Trigger: GCTCTGCACATTCCAAAGGCAGGTGTCAGAGATGGC...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTCGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCCGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGGACTCCCAGTGAGTaGAGGATCTGGGATAACTGG +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPWTPSE*RIWDNW
Trigger: CCAGTTATCCCAGATCCTGCACTCACTGGGAGTCCA...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGAGGTTGCTGTCCTaGAGTTGTGGAACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTERLLS*SCGTPA
Trigger: CGCTGGAGTTCCACAACTGCAGGACAGCAACCTCTC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTATTTGGCGACCCTCCTaGACTCAAAGGGACCGAACT +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPIWRPS*TQRDRT
Trigger: AGTTCGGTCCCTTTGAGTCCAGGAGGGTCGCCAAAT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATTGCAGTCATCCTCGTTaGAGGTGTCGAAGCACACGG +
Preference number: 4 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDCSHPR*RCRSTR
Trigger: CCGTGTGCTTCGACACCTCCAACGAGGATGACTGCA...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCCTCGGCCTCCGCCGCTaGCCGCACCAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRLGLRR*PHQHHP
Trigger: TGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGAG...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATCGGCCTGCTTCAGCATaGGCTTGTCCATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDRPASA*ACPSSW
Trigger: CCAAGAAGATGGACAAGCCCATGCTGAAGCAGGCCG...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATACACGCCCACTGGCTaGGCTCCGACTCCACGGGGG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRYTPTG*APTPRG
Trigger: CCCCCGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTGTCAGTGGTGGTGGTaGCCAGCTTCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTECQWWW*PASPEP
Trigger: TGGTTCTGGGGAAGCTGGCCACCACCACCACTGACA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTGGTGTCAGTGGTGGTaGTGGCCAGCTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMWCQWW*WPASPE
Trigger: TTCTGGGGAAGCTGGCCACCACCACCACTGACACCA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACACTTTGGAACCGAGCTaGTGTCAGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHTLEPS*CQWWWW
Trigger: CCACCACCACCACTGACACCAGCTCGGTTCCAAAGT...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCATGATGGGTGAACTTTaGAACCGAGCTGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVMMGEL*NRAGVS
Trigger: ACTGACACCAGCTCGGTTCCAAAGTTCACCCATCAT...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAAGTGGACATGGATGTaGTCCCTGAGCACATCCACG +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPKWTWM*SLSTST
Trigger: CGTGGATGTGCTCAGGGACCACATCCATGTCCACTT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCG +
Preference number: 4 (lower is better)
Translates to: GPAQLAALRLHLVVCELNINSSL*WSSINA
Trigger: CGCGTTGATGGATGACCACCAGAGGGAAGAGTTTAT...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGGGCAGGTTTTCACGGTaGATGACCATGTGGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWGRFSR*MTMWAW
Trigger: CCACGCCCACATGGTCATCCACCGTGAAAACCTGCC...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGATCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGGTGTGGATGAGCTTGTaGGTCTCCATGGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRVWMSL*VSMVFL
Trigger: GAGGAACACCATGGAGACCCACAAGCTCATCCACAC...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGAGTCAGCTCAGGCTaGACGATGCCAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHRVSSG*TMPMEE
Trigger: CTCCTCCATTGGCATCGTCCAGCCTGAGCTGACTCT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCGTCAGGTTGATGAAATaGGCCACAGACTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFVRLMK*ATDCGF
Trigger: GAACCCACAGTCTGTGGCCCATTTCATCAACCTGAC...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPTRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACCGGGCCGCACACGCAGACCTaGCTGTTCACCGCACATTCA +
Preference number: 4 (lower is better)
Translates to: SRCLFILLRQENTLPHTGPHTQT*LFTAHS
Trigger: TGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGG...CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAAGTGAGTGCAGGATCTaGGATAACTGGCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGSECRI*DNWQSR
Trigger: CCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTAGTGTTTCCTCAAGATaGACTCCCAGTGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSVSSR*TPSECR
Trigger: CCTGCACTCACTGGGAGTCCATCTTGAGGAAACACT...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAGATTCCATGGATGCCTaGAGCACTTGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGDSMDA*STCIWR
Trigger: TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATC...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCTCCTGCTGATTCCATaGATGCCTGGAGCACTTGTA +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALELLLIP*MPGALV
Trigger: TACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGTCCACAGAGCCTGGTaGCCACAATGGCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFVHRAW*PQWLDL
Trigger: TAGATCCAGCCATTGTGGCCACCAGGCTCTGTGGAC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGTGGGTCCACAGAGCCTaGTGGCCACAATGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWWVHRA*WPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCA...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CACTTGGCACAGAACGTTTTCCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGGTCCACAGAGCCTaGTGGCCACAATGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: HLAQNVFLWPPRKTHTSGWVHRA*WPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCA...TCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGAAAACGTTCTGTGCCAAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR CCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACAACTCACACCAGTGGATaGCACTCGAGTCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTTHTSG*HSSPQL
Trigger: CAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGT...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATACTCACACCAGTGGATaGCACTCGAGTCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHTHTSG*HSSPQL
Trigger: CAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CAA 72 bp TTCTTGTCGCCGTGGGTGAGCAGGTGCTTGTTCATATaGCTCCGGCAGGAGAACACCTTGCCACACACCGGG +
Preference number: 4 (lower is better)
Translates to: FLSPWVSRCLFI*LRQENTLPHTG
Trigger: CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp TGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTaGCGCCCGCAGATCTCGCAGGTGTACTTCTTGTCG +
Preference number: 4 (lower is better)
Translates to: WMWSLSTSTRKN*RPQISQVYFLS
Trigger: CGACAAGAAGTACACCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp CCTTTCCCACACTCGGCACACAGGTACTCGCGGACATaGTCGTGCACACGCATGTGCTCCTTCAGCATGTCC +
Preference number: 4 (lower is better)
Translates to: PFPHSAHRYSRT*SCTRMCSFSMS
Trigger: GGACATGCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGAGTGTGGGAAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp TTAATCCCCGTGTGCCGCTTGCAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: LIPVCRLQCLSM*TFCANLRWHSL
Trigger: CAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCACACGGGGATTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp TCCGGCTGGGGGTGGATCTGGACGTCATTTTGGCGGTaGTGCAACATGGCAGAGCCGCTGACGGTATCAAAG +
Preference number: 4 (lower is better)
Translates to: SGWGWIWTSFWR*CNMAEPLTVSK
Trigger: CTTTGATACCGTCAGCGGCTCTGCCATGTTGCACAACCGCCAAAATGACGTCCAGATCCACCCCCAGCCGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp TGGTCACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTaGACCAGGGTCGTCAGGTTGATGAAATGGGCCACA +
Preference number: 4 (lower is better)
Translates to: WSLSWLPRGVME*TRVVRLMKWAT
Trigger: TGTGGCCCATTTCATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGTGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGGCTCTCTTTGCGGCTaGACAATTTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGGSLCG*TILHTL
Trigger: AAGAGTGTGCAAAATTGTTCAGCCGCAAAGAGAGCC...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGGTTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: VTVRIELSSCNWRSGVVRLQLYL*GSESAL
Trigger: GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAA...CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCCTTGTGCACCTCCATaGTGTGCTTCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTPCAPP*CASGTP
Trigger: AGGAGTACCTGAAGCACATCATGGAGGTGCACAAGG...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACACTCCGTCTCTTTCTCTaGGTATTCGCTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTLRLFL*VFAEGG
Trigger: GCCACCTTCAGCGAATACTCAGAGAAAGAGACGGAG...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCTCCGTCTCTTTCTCTaGGTATTCGCTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTLRLFL*VFAEGG
Trigger: GCCACCTTCAGCGAATACTCAGAGAAAGAGACGGAG...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGGTAAGGTGAGGAGGTaGGCCCCACAGACCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWGKVRR*APQTLL
Trigger: CAGGAGGGTCTGTGGGGCTCACCTCCTCACCTTACC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACAGAACTGCGTATAGGTaGGGACTCTTCTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHRTAYR*GLFCLG
Trigger: ACCCAGGCAGAAGAGTCCTCACCTATACGCAGTTCT...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAAACGAATTCTCCACTaGGATGGGTCCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPKRILH*DGSTEP
Trigger: AGGCTCTGTGGACCCATCTCAGTGGAGAATTCGTTT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGACTAGTGGGGAAGCCATaGGCCTTCCGCCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRLVGKP*AFRLWM
Trigger: CATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAG...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACCCAGCATCATCCAGTTaGAGTCATCCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHPASSS*SHPRWR
Trigger: CCTCCAACGAGGATGACTGCAACTGGATGATGCTGG...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACGCTGTTTTCTGGGGTaGCTGCAGCGTGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRRCFLG*LQRGRQ
Trigger: CTGGCGTCCACGCTGCAGGCACCCCAGAAAACAGCG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGTTCATTGAGGAGCTaGAGCTCCAGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHCSLRS*SSRKVA
Trigger: TGCCACCTTCCTGGAGCTGCAGCTCCTCAATGAACA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCTGTTCATTGAGGAGCTaGAGCTCCAGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFCSLRS*SSRKVA
Trigger: TGCCACCTTCCTGGAGCTGCAGCTCCTCAATGAACA...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACTCCTTCTCGGGAGCTaGTGCCTCGCTTTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRLLLGS*CLALAA
Trigger: GGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACCCCGGGGTGTGTCCTaGTCCTTCTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRPRGVS*SFSGAA
Trigger: AGCAGCTCCCGAGAAGGAGCAGGACACACCCCGGGG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCCCCGGGGTGTGTCCTaGTCCTTCTCGGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLPRGVS*SFSGAA
Trigger: AGCAGCTCCCGAGAAGGAGCAGGACACACCCCGGGG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGCCGGATGCCGTGTCTaGTTGAGAGAATTAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHAGCRV*LRELSS
Trigger: GGAGCTTAATTCTCTCAAGCAGACACGGCATCCGGC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGAACAGCTTGTCACCATaGGAGCGCACGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMNSLSP*ERTCLL
Trigger: GAGCAGGCACGTGCGCTCGCATGGTGACAAGCTGTT...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTCGTCCACCTCGTTCCTaGTGTGCTTGTAGGAAACGT +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFRPPRS*CACRKR
Trigger: ACGTTTCCTACAAGCACAGCAGGAACGAGGTGGACG...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAAACTTCTTGTCGCCGTaGTTCTTCTTGTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGNFLSP*FFLCLE
Trigger: CTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGGCAGGAGAACACCTTaGCACACACCGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRGRRTP*HTPGTR
Trigger: CCGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGACCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRPWVSR*LFILLR
Trigger: CCGGAGCAATATGAACAAGCACCTGCTCACCCACGG...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGTAGGTGGCCTTCAGTaGAAAGCGCCGGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCVGGLQ*KAPVAD
Trigger: ATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTAC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTCGCGGACATTGTCGTaGACACGCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTESRTLS*TRMCSF
Trigger: GAAGGAGCACATGCGTGTGCACGACAATGTCCGCGA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATGCGAGCACCTCGGGGTaGTTGCGCCGCATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDASTSG*LRRMCR
Trigger: CCGACACATGCGGCGCAAGCACCCCGAGGTGCTCGC...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTTGGCAGCTTTCCCGTaGTTCCCTTCGGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMLAAFP*FPSAKS
Trigger: GGATTTGGCCGAAGGGAAGCACGGGAAAGCTGCCAA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACTTGGCAGCTTTCCCGTaGTTCCCTTCGGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYLAAFP*FPSAKS
Trigger: GGATTTGGCCGAAGGGAAGCACGGGAAAGCTGCCAA...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCTGAATGCTCTGTACTaGGGAATTGGTCTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTLNALY*GIGLVA
Trigger: GGCGACGAGACCAATTCCGCAGTACAGAGCATTCAG...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCACCACTACCTGCTGAATaGTCTGTACTGCGGAATTGG +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPPLPAE*SVLRNW
Trigger: CCAATTCCGCAGTACAGAGCATTCAGCAGGTAGTGG...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTCCACTACCTGCTGAATaGTCTGTACTGCGGAATTGG +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPPLPAE*SVLRNW
Trigger: CCAATTCCGCAGTACAGAGCATTCAGCAGGTAGTGG...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGTCAGTCTGGGGCACTaGCCGCCACGTGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTVSLGH*PPRERV
Trigger: CACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGAC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAATCTGCTGCTGCTGCTaGTCCGCCTGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRICCCC*SACTWG
Trigger: GCCCCAGGTGCAGGCGGAGCAGCAGCAGCAGCAGAT...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTCCCAAACATCCCTCTaGAGTTCTTGCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHSQTSL*SSCPES
Trigger: AGACTCGGGGCAAGAACTGCAGAGGGATGTTTGGGA...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGGGGATGACCTTGCCCTaGTTAACACAAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEGMTLP*LTQRSL
Trigger: AAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCC...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAGAAAATGTTCCCTGCTaGCTGCTGCCACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPENVPC*LLPPVN
Trigger: ATTCACAGGTGGCAGCAGGCAGCAGGGAACATTTTC...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGAGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTGGATATTACTAAGATaGGTTTTGAGCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRWILLR*VLSWSQ
Trigger: CTGACTCCAGCTCAAAACGCATCTTAGTAATATCCA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTGGACTCCCAGTGAGTaGAGGATCTGGGATAACTGG +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTWTPSE*RIWDNW
Trigger: CCAGTTATCCCAGATCCTGCACTCACTGGGAGTCCA...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARTRVHS*TEPRVQ
Trigger: TTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGCCGTGCTTCTTCTTGTaGTTGGAGAGGTTGCTGTCC +
Preference number: 4 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRPCFFL*LERLLS
Trigger: GGACAGCAACCTCTCCAAGCACAAGAAGAAGCACGG...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTCGGAGTCGTGGTACTaGCTGCAGTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTESESWY*LQSSHQ
Trigger: CTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CACTTGGCACAGAACGTTTTCCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATCGGAGTCGTGGTACTaGCTGCAGTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: HLAQNVFLWPPRKTHTSGSESWY*LQSSHQ
Trigger: CTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGA...TCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGAAAACGTTCTGTGCCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTGCAGTCATCCTCGTTaGAGGTGTCGAAGCACACGG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTECSHPR*RCRSTR
Trigger: CCGTGTGCTTCGACACCTCCAACGAGGATGACTGCA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGCGGCCTGCTTCAGCATaGGCTTGTCCATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWRPASA*ACPSSW
Trigger: CCAAGAAGATGGACAAGCCCATGCTGAAGCAGGCCG...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTGGCTTGTTCTAAGTaGCCCAACAGATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERLACSK*PNRCSL
Trigger: CAATGAACATCTGTTGGGCCACTTAGAACAAGCCAA...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCACTGGAGGAAGGCTTTTaGCTTGTTCTAAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPLEEGF*LVLSGP
Trigger: TGGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAG...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTCTGGAGGAAGGCTTTTaGCTTGTTCTAAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPLEEGF*LVLSGP
Trigger: TGGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAG...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAGAGGCTGCTCAGCTTTaGACACTTTGGGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPEAAQL*TLWVFS
Trigger: GGAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTC...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGCATGATCCGCTCATCTaGCGTTGCACTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWHDPLI*RCTHRL
Trigger: GAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATG...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGGTGGTGTCAGTGGTGGTaGTGGCCAGCTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: VTVRIELSSCNWRSGVVRWCQWW*WPASPE
Trigger: TTCTGGGGAAGCTGGCCACCACCACCACTGACACCA...CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGACTTTGGAACCGAGCTaGTGTCAGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMTLEPS*CQWWWW
Trigger: CCACCACCACCACTGACACCAGCTCGGTTCCAAAGT...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGAGGTGCCGGCGCTGGTaGTCCAGCATGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWRCRRW*SSMTSL
Trigger: CAAGGACGTCATGCTGGACCACCAGCGCCGGCACCT...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTCCAGGTGCCGGCGCTaGTGGTCCAGCATGACGTCC +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASSRCRR*WSSMTS
Trigger: GGACGTCATGCTGGACCACCAGCGCCGGCACCTGGA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATAAGTGGACATGGATGTaGTCCCTGAGCACATCCACG +
Preference number: 4 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDKWTWM*SLSTST
Trigger: CGTGGATGTGCTCAGGGACCACATCCATGTCCACTT...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATCCTTGAAGTGGACATaGATGTGGTCCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPSLKWT*MWSLST
Trigger: TGTGCTCAGGGACCACATCCATGTCCACTTCAAGGA...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTCAGATCTCGCAGGGGTaGATGTACTTCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFQISQG*MYFCTL
Trigger: CAACGTGCAGAAGTACATCCACCCCTGCGAGATCTG...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATGCAGCTTCATGTGGTaGCGCAGCGCGTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARCSFMW*RSACLV
Trigger: GACCAAGCACGCGCTGCGCCACCACATGAAGCTGCA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAAGGCGTCGATGGTGGTaGTCTCCGGGAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRRRRWW*SPGGGP
Trigger: TGGACCACCTCCCGGAGACCACCACCATCGACGCCT...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAAGGAGGCGTCGATGGTaGTGGTCTCCGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGRRRRW*WSPGGG
Trigger: ACCACCTCCCGGAGACCACCACCATCGACGCCTCCT...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATGGAGGAGGCGTCGATaGTGGTGGTCTCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGWRRRR*WWSPGG
Trigger: ACCTCCCGGAGACCACCACCATCGACGCCTCCTCCA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTGGAGGAGGCGTCGATaGTGGTGGTCTCCGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWWRRRR*WWSPGG
Trigger: ACCTCCCGGAGACCACCACCATCGACGCCTCCTCCA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGAGAGTCAGCTCAGGCTaGACGATGCCAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWRVSSG*TMPMEE
Trigger: CTCCTCCATTGGCATCGTCCAGCCTGAGCTGACTCT...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACTGGTGTGGTCACATTTaGGTCACCCAGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYWCGHI*VTQGHH
Trigger: GTGGTGACCCTGGGTGACCCAAATGTGACCACACCA...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCTTGTCCAGCTGTAACTaGCGTTCAGGGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFLSSCN*RSGVVR
Trigger: CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAA...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATTGTCCAGCTGTAACTaGCGTTCAGGGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTLSSCN*RSGVVR
Trigger: CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTGTCCAGCTGTAACTaGCGTTCAGGGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHLSSCN*RSGVVR
Trigger: CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAATCTGGACGTCATTTTaGCGGTTGTGCAACATGGCA +
Preference number: 4 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGIWTSF*RLCNMA
Trigger: TGCCATGTTGCACAACCGCCAAAATGACGTCCAGAT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTGTCAGGTTGATGAAATaGGCCACAGACTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPVRLMK*ATDCGF
Trigger: GAACCCACAGTCTGTGGCCCATTTCATCAACCTGAC...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTCCTTGAAGTGGACATGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTTTGCTGGTCACTAAGCTaGCTCCCCAGGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: VLEVDMDVVPEHIHAEELCWSLS*LPRGVM
Trigger: CATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCA...AAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGACACGTGAGCGGGTGCTaGTCACTAAGCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGHVSGC*SLSWLP
Trigger: GGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTG...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGGCAAGACGTCAGTCTaGGGCACTGCCCGCCACGTG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRGKTSV*GTARHV
Trigger: CACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGGCAAGACGTCAGTCTaGGGCACTGCCCGCCACGTG +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASGKTSV*GTARHV
Trigger: CACGTGGCGGGCAGTGCCCCAGACTGACGTCTTGCC...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTGCCTTGGTAAGGCATaGTGTGGAGCCCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHCLGKA*CGAPSS
Trigger: ACTGGATGGGGCTCCACACCATGCCTTACCAAGGCA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAGGGCTTCAGCCAGAATaGATACATTTGGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGGLQPE*IHLDCR
Trigger: TCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCC...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTTCCACTCGGGATTCTaGCTGGGCTTCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFFHSGF*LGFSQN
Trigger: ATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTCCACTCGGGATTCTaGCTGGGCTTCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHFHSGF*LGFSQN
Trigger: ATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGACCCTGCCCCCGAAACTaGTACACAGACGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRPCPRN*YTDVTA
Trigger: TGCTGTCACGTCTGTGTACCAGTTTCGGGGGCAGGG...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGCCCTGCCCCCGAAACTaGTACACAGACGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMPCPRN*YTDVTA
Trigger: TGCTGTCACGTCTGTGTACCAGTTTCGGGGGCAGGG...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTTGTCCTCTCACTGTaGCCACAAACAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEFVLSL*PQTEYQ
Trigger: CTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAA...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAGTGTTTCCTCAAGATaGACTCCCAGTGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPSVSSR*TPSECR
Trigger: CCTGCACTCACTGGGAGTCCATCTTGAGGAAACACT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCACTCCTGCTGATTCCATaGATGCCTGGAGCACTTGTA +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPLLLIP*MPGALV
Trigger: TACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAG...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGGTCCACAGAGCCTGGTaGCCACAATGGCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEVHRAW*PQWLDL
Trigger: TAGATCCAGCCATTGTGGCCACCAGGCTCTGTGGAC...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACACTCACACCAGTGGATaGCACTCGAGTCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDTHTSG*HSSPQL
Trigger: CAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGT...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCAAGACTCACACCAGTaGATGGCACTCGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTQDSHQ*MALEST
Trigger: TGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTG...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACACAAGACTCACACCAGTaGATGGCACTCGAGTCCACA +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTQDSHQ*MALEST
Trigger: TGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTG...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp GCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTaGGATGCCACAAATGGGAACGATAGAGGTACAGGA +
Preference number: 4 (lower is better)
Translates to: AASSGEAMSLPP*DATNGNDRGTG
Trigger: TCCTGTACCTCTATCGTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CAA 72 bp ATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTaGCACTCGTACTCCTTGATGCCCTTGTGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: MLTFCANLRWHS*HSYSLMPLCSF
Trigger: GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp GAGCACGTCCACTGCTTGCCCACTGTGTGGATGAGCTaGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTC +
Preference number: 4 (lower is better)
Translates to: EHVHCLPTVWMS*WVSMVFLSLNV
Trigger: GACATTCAGCGAGAGGAACACCATGGAGACCCACAAGCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp ACGTGCTTCTGCAGCATGTACTCGGTCACGTACTTCTaGTCGCACACGGAGCACGTCCACTGCTTGCCCACT +
Preference number: 4 (lower is better)
Translates to: TCFCSMYSVTYF*SHTEHVHCLPT
Trigger: AGTGGGCAAGCAGTGGACGTGCTCCGTGTGCGACAAGAAGTACGTGACCGAGTACATGCTGCAGAAGCACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GTCCTTGAAGTGGACATGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTTGCTGGTGGTCCAGCATaGCGTCCTTGCGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: VLEVDMDVVPEHIHAEELAGGPA*RPCGRT
Trigger: TGTTCTACCGCAAGGACGTCATGCTGGACCACCAGC...AAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTTGCACTCGTACTCCTTaGTGCCCTTGTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCCTRTP*CPCAAS
Trigger: TGAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCA...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGTGGTGTTCCTCTCGCTaGATGTCTTCCCACACAATT +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRWCSSR*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGCGAGAGGAACACCA...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTELSCVS*TCFCSM
Trigger: CATGCTGCAGAAGCACGTTCAGCTCACACACGACAA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGCTCCGTCTCTTTCTCTaGGTATTCGCTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGLRLFL*VFAEGG
Trigger: GCCACCTTCAGCGAATACTCAGAGAAAGAGACGGAG...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACCTCCGTCTCTTTCTCTaGGTATTCGCTGAAGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYLRLFL*VFAEGG
Trigger: GCCACCTTCAGCGAATACTCAGAGAAAGAGACGGAG...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACCGGGGTCACCACTACCTGCTaGATGCTCTGTACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: SRCLFILLRQENTLPHTGVTTTC*MLCTAE
Trigger: TTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGAC...CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCCTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: DVTARVPAHADLAVHRTFLLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAACTGGTACACAGACGTaGCAGCACGTGTCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGTGTQT*QHVSPH
Trigger: GTGCGGGGACACGTGCTGTCACGTCTGTGTACCAGT...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTCGTCATCATACAACCTaGTGTGACAGGAAATACAGC +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPRHHTT*CDRKYS
Trigger: GCTGTATTTCCTGTCACATCAGGTTGTATGATGACG...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTCGAAGCACACGGGGTaGCCGTCCTTCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWSKHTG*PSFWNT
Trigger: GGTGTTCCAGAAGGACGGGCACCCCGTGTGCTTCGA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGCCAGCATCATCCAGTTaGAGTCATCCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWPASSS*SHPRWR
Trigger: CCTCCAACGAGGATGACTGCAACTGGATGATGCTGG...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACAACGCCAGAGCCGGCCTaGTTCAGCATGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTTPEPA*FSMGLS
Trigger: GGACAAGCCCATGCTGAAGCAGGCCGGCTCTGGCGT...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCAGTTTTCTGGGGTGCCTaGAGCGTGGACGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPVFWGA*SVDARA
Trigger: GGCTCTGGCGTCCACGCTGCAGGCACCCCAGAAAAC...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGTTTTCTGGGGTGCCTaGAGCGTGGACGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRVFWGA*SVDARA
Trigger: GGCTCTGGCGTCCACGCTGCAGGCACCCCAGAAAAC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCCGCTGTTTTCTGGGGTaGCTGCAGCGTGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRRCFLG*LQRGRQ
Trigger: CTGGCGTCCACGCTGCAGGCACCCCAGAAAACAGCG...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCACTTCTCGGGAGCTGCTaGCTCGCTTTGGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPLLGSC*LALAAW
Trigger: CCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAG...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACCGTGCCTGCTCAGGTTaGTGCTGTTCTGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDRACSG*CCSGRS
Trigger: AGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACG...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGCGTCCACCTCGTTCCTaGTGTGCTTGTAGGAAACGT +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTERPPRS*CACRKR
Trigger: ACGTTTCCTACAAGCACAGCAGGAACGAGGTGGACG...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGTCTTCTCACAAGTaGCGCAGCGGTACCTGTACT +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGRSSHK*RSGTCT
Trigger: AGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCT...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGAGGTCTTCTCACAAGTaGCGCAGCGGTACCTGTACT +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTERSSHK*RSGTCT
Trigger: AGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCT...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGAGGTCTTCTCACAAGTaGCGCAGCGGTACCTGTACT +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMRSSHK*RSGTCT
Trigger: AGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCT...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCTTGTCATCTGTCCTaGAGTTGTGGAACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHSCHLS*SCGTPA
Trigger: CGCTGGAGTTCCACAACTGCAGGACAGATGACAAGA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR GCA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTGTGCTTGGAGAGGTTaGTGTTGGTGGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSCAWRG*CWWRRI
Trigger: GATTCTTCTCCACCAACAGCAACCTCTCCAAGCACA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000422911.6
CDS-3UTR GCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGGTGCTTGTTCATATTaGTCCGGCAGGAGAACACCT +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHGACSY*SGRRTP
Trigger: AGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCCACGCGGAAGAACTTaGGCCCGCAGATCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLPRGRT*ARRSRR
Trigger: CCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACCACGCGGAAGAACTTaGGCCCGCAGATCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRPRGRT*ARRSRR
Trigger: CCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTGCACCTCCATGATGTaGTTCAGGTACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHCTSMM*FRYSFP
Trigger: GGGGAAGGAGTACCTGAAGCACATCATGGAGGTGCA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCACCTCCATGATGTaGTTCAGGTACTCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRCTSMM*FRYSFP
Trigger: GGGGAAGGAGTACCTGAAGCACATCATGGAGGTGCA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGGGTGGATGTACTTCTaGACGTTGGGGTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALGWMYF*TLGSGR
Trigger: CCTGCCGGACCCCAACGTGCAGAAGTACATCCACCC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTCGTGCACACGCATGTaGTCCTTCAGCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHSCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAGGAGCACATGCGTGTGCACGA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTCGTACGTGTGCCGCTTGCAGTaGTTGAGCATGTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: LSMLTFCANLRWHSLHSYVCRLQ*LSMLTF
Trigger: GAAGGTCAACATGCTCAAGCACTGCAAGCGGCACAC...GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCTTTAATCCCCGTGTaGCGCTTGCAGTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSLIPV*RLQCLS
Trigger: GCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTCCTTGAAGTGGACATGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTTACGGAGCACGTCCACTaGTTGCCCACTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: VLEVDMDVVPEHIHAEELTEHVH*LPTVWM
Trigger: CATCCACACAGTGGGCAAGCAGTGGACGTGCTCCGT...AAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACCGCCACGTGAGCGGGTaGTGGTCACTAAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYRHVSG*WSLSWL
Trigger: GAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCG...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATGCTGTGGGGGTGCCTaGGGCTGCGAGGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRCCGGA*GCEGGK
Trigger: CTTGCCACCCTCGCAGCCGCAGGCACCCCCACAGCA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATGCTGCTGCTCCGCCTaGACCTGGGGCTGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRCCCSA*TWGWAA
Trigger: GGCGGCCCAGCCCCAGGTGCAGGCGGAGCAGCAGCA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTATCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGAACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAAAATGTTCCCTGCTaGCTGCTGCCACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTENVPC*LLPPVN
Trigger: ATTCACAGGTGGCAGCAGGCAGCAGGGAACATTTTC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTGGATATTACTAAGATaGGTTTTGAGCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: PPAQSHAGHSEAALGTERWILLR*VLSWSQ
Trigger: CTGACTCCAGCTCAAAACGCATCTTAGTAATATCCA...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACAGCCGCGCGACCCTCTaGATCTGGGCAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYSRATL*IWAAVK
Trigger: CTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCT...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGTGGACTCCCAGTGAGTaGAGGATCTGGGATAACTGG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGWTPSE*RIWDNW
Trigger: CCAGTTATCCCAGATCCTGCACTCACTGGGAGTCCA...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACCGGGTGGACTCCCAGTGAGTaGAGGATCTGGGATAACTGG +
Preference number: 4 (lower is better)
Translates to: SRCLFILLRQENTLPHTGWTPSE*RIWDNW
Trigger: CCAGTTATCCCAGATCCTGCACTCACTGGGAGTCCA...CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGACAGACCCTCCTGCATaGTGCCTGGGGATGAACATT +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMTDPPA*CLGMNI
Trigger: AATGTTCATCCCCAGGCAGCATGCAGGAGGGTCTGT...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAACTCGAGTCCACAGCTaGACGGAGCCACGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALTRVHS*TEPRVQ
Trigger: TTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGTCGGAGTCGTGGTACTaGCTGCAGTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMSESWY*LQSSHQ
Trigger: CTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGA...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGGGACATTCGGAGTCGTaGTACTGGCTGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEGHSES*YWLQSS
Trigger: TGAAGACTGCAGCCAGTACCACGACTCCGAATGTCC...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACATTTGGCGACCCTCCTaGACTCAAAGGGACCGAACT +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHIWRPS*TQRDRT
Trigger: AGTTCGGTCCCTTTGAGTCCAGGAGGGTCGCCAAAT...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACTTGGCTTGTTCTAAGTaGCCCAACAGATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: GPAQLAALRLHLVVCELNLACSK*PNRCSL
Trigger: CAATGAACATCTGTTGGGCCACTTAGAACAAGCCAA...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGCTGCTGCCTCGCTTTaGCTGCCTGGAGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALAAASL*LPGGRL
Trigger: AAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACCAGCTTTGGACACTTTaGGTTTTCTCCCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHQLWTL*VFSPFE
Trigger: CTCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTG...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCCGAGCTGGTGTCAGTaGTGGTGGTGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLPSWCQ*WWWPAS
Trigger: GGAAGCTGGCCACCACCACCACTGACACCAGCTCGG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTATGATGGGTGAACTTTaGAACCGAGCTGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPMMGEL*NRAGVS
Trigger: ACTGACACCAGCTCGGTTCCAAAGTTCACCCATCAT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGTACTTCTTGTCGCCGTaGGTGAGCAGGTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTCACCCACGGCGACAAGAAGTA...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGAGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATG +
Preference number: 4 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFNSSLW*SSINAM
Trigger: CATCGCGTTGATGGATGACCACCAGAGGGAAGAGTT...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACGGCCGAAGGTGAGCTaGCACCGCTTGCAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRRPKVS*HRLQLY
Trigger: GTACAGCTGCAAGCGGTGCCAGCTCACCTTCGGCCG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGATGCGCGAACCTGCGGTaGCACTCCTTGCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRCANLR*HSLHSY
Trigger: GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCA...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGTGTGGATGAGCTTGTaGGTCTCCATGGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCVWMSL*VSMVFL
Trigger: GAGGAACACCATGGAGACCCACAAGCTCATCCACAC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCAGGAGGCGTCGATGGTaGTGGTCTCCGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLRRRRW*WSPGGG
Trigger: ACCACCTCCCGGAGACCACCACCATCGACGCCTCCT...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCTTGTGACTTCGCTTaGCAGCTTTCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSCDFA*QLSRAS
Trigger: GGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATTGTCCAGCTGTAACTaGCGTTCAGGGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRLSSCN*RSGVVR
Trigger: CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATGGGCCACAGACTGTaGGTTCGAGGCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWMGHRL*VRGFRL
Trigger: CAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCAT...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGTCAGGTTGATGAAATaGGCCACAGACTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFVRLMK*ATDCGF
Trigger: GAACCCACAGTCTGTGGCCCATTTCATCAACCTGAC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATCTGCGGCTGCGAGGGTaGCAAGACGTCAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDLRLRG*QDVSLG
Trigger: CCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAG...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGTGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTECWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGTRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTETRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCATCCTTTGTTCTGCTaGCAACATCAGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTHPLFC*QHQDCS
Trigger: GGAGCAGTCCTGATGTTGCCAGCAGAACAAAGGATG...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTGCCTGGGTGGTACATaGTTGTTGTATTTTGCTATC +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGACLGGT*LLYFAI
Trigger: GATAGCAAAATACAACAACCATGTACCACCCAGGCA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTCCTTTCACAATCCAATaGGAAAGCCCAAGACGCCGC +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCPFTIQ*ESPRRR
Trigger: GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGG...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CAA 72 bp CAGGTGTACTTCTTGTCGCCGTGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAGGAGAACACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QVYFLSPWVSRC*FILLRQENTLP
Trigger: TGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCTCACCCACGGCGACAAGAAGTACACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp TGGTTAAGCCGACTGAGCTCGATGGTGTGGTCACATTaGGGTCACCCAGGGTCACCACTACCTGCTGAATGC +
Preference number: 4 (lower is better)
Translates to: WLSRLSSMVWSH*GHPGSPLPAEC
Trigger: GCATTCAGCAGGTAGTGGTGACCCTGGGTGACCCAAATGTGACCACACCATCGAGCTCAGTCGGCTTAACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp CCGCTGACGGTATCAAAGGTCACGGTCAGGATTGAGTaGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: PLTVSKVTVRIE*SSCNWRSGVVR
Trigger: CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGACCTTTGATACCGTCAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGGTCCGCTTGACGAGCTaGGTGATGGCGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLVRLTS*VMANTP
Trigger: GGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGAC...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTGTCTCTGGAGGTGGTaGAGTACACGTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWCLWRW*STRRCR
Trigger: ACGGCAGCGACGTGTACTTCACCACCTCCAGAGACA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTCAACGCGATGTCCTTaGAGTGGACATGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHSTRCP*SGHGCG
Trigger: ACCACATCCATGTCCACTTCAAGGACATCGCGTTGA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTTCAACGCGATGTCCTTaGAGTGGACATGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCSTRCP*SGHGCG
Trigger: ACCACATCCATGTCCACTTCAAGGACATCGCGTTGA...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATCCCCCGGCCGAAGGTaGGCTGGCACCGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRSPGRR*AGTACS
Trigger: GCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTCCCCCGGCCGAAGGTaGGCTGGCACCGCTTGCAGC +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANSPGRR*AGTACS
Trigger: GCTGCAAGCGGTGCCAGCTCACCTTCGGCCGGGGGA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGGTTCCCGATGCTGTTaGAGATCCGCCCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALGSRCC*RSARRS
Trigger: AGATCTGCGGGCGGATCTTCAACAGCATCGGGAACC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTGGTGTTCCTCTCGCTaGATGTCTTCCCACACAATT +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHWCSSR*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGCGAGAGGAACACCA...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GTCCTTGAAGTGGACATGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTTCCACCTTGTCGTGTGTaGGCTGAACGTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VLEVDMDVVPEHIHAEELPPCRV*AERASA
Trigger: TGCAGAAGCACGTTCAGCTCACACACGACAAGGTGG...AAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGACATGGCAGAGCCGCTaGCGGTATCAAAGGTCACGG +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWTWQSR*RYQRSR
Trigger: CCGTGACCTTTGATACCGTCAGCGGCTCTGCCATGT...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGGTCTGCTGTTTGGAGTaGAGTGCTGAGAAAGTTGCG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWVCCLE*SAEKVA
Trigger: CGCAACTTTCTCAGCACTTCACTCCAAACAGCAGAC...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCACGTCATCATACAACCTaGTGTGACAGGAAATACAGC +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPRHHTT*CDRKYS
Trigger: GCTGTATTTCCTGTCACATCAGGTTGTATGATGACG...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCGCTGTTTTCTGGGGTaGCTGCAGCGTGGACGCCAG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTRCFLG*LQRGRQ
Trigger: CTGGCGTCCACGCTGCAGGCACCCCAGAAAACAGCG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGACTGCCTCGCTTTGGCTaGCTGGAGGAAGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGLPRFG*LEEGFW
Trigger: CCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAG...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACATGATCTCTGCCACTTaGTCTGTGGGTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHMISAT*SVGSLS
Trigger: AGACAAGGAACCCACAGAGCAAGTGGCAGAGATCAT...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTATGATCTCTGCCACTTaGTCTGTGGGTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTMISAT*SVGSLS
Trigger: AGACAAGGAACCCACAGAGCAAGTGGCAGAGATCAT...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACCCATGCGAGCGCACGTaGCTGCTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHPCERT*LLRLLL
Trigger: CAGCAGCAACCTGAGCAGGCACGTGCGCTCGCATGG...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGGTAGAACATCTTGCTaGAGACCTCACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTGRTSC*RPHRQT
Trigger: AGTTTGCCTGTGAGGTCTGCAGCAAGATGTTCTACC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGTGCGGTAGAACATCTTaGTGCAGACCTCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGCGRTS*CRPHRQ
Trigger: TTGCCTGTGAGGTCTGCAGCAAGATGTTCTACCGCA...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACTGCGGTAGAACATCTTaGTGCAGACCTCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDCGRTS*CRPHRQ
Trigger: TTGCCTGTGAGGTCTGCAGCAAGATGTTCTACCGCA...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGGCAGGAGAACACCTTaGCACACACCGGGCACCCGG +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRGRRTP*HTPGTR
Trigger: CCGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAGCCGGTTGCAGATGCTaGAGCCATAGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRAGCRC*SHSPSP
Trigger: AGGAGAAGGGCTATGGCTGCAGCATCTGCAACCGGC...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGGGTGGATGTACTTCTaGACGTTGGGGTCCGGCAGG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRGWMYF*TLGSGR
Trigger: CCTGCCGGACCCCAACGTGCAGAAGTACATCCACCC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTCACAGCTGGCAGCTCTaGGCCTCCACCTTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASHSWQL*ASTLSC
Trigger: ACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTG...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCCGCCTGCTGTGGGGGTaGCTGCGGCTGCGAGGGTGG +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTRLLWG*LRLRGW
Trigger: CCACCCTCGCAGCCGCAGGCACCCCCACAGCAGGCG...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGACGGCCCAGGACTTACTaGCTTGGTAAGGCATGGTGT +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARRPRTY*LGKAWC
Trigger: ACACCATGCCTTACCAAGGCAGTAAGTCCTGGGCCG...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATTTGACCATGACCACTaGGCCCAGCTCGGGACATTC +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARFDHDH*AQLGTF
Trigger: GAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACGCTTGTCCATCTTCTTaGCATAGAAGGCCGCATACC +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDACPSS*HRRPHT
Trigger: GGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGC...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACGCTTGTCCATCTTCTTaGCATAGAAGGCCGCATACC +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHACPSS*HRRPHT
Trigger: GGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGC...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGCTGGAGGAAGGCTTTTaGCTTGTTCTAAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTELEEGF*LVLSGP
Trigger: TGGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAG...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGACTCGCTTTGGCTGCCTaGAGGAAGGCTTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARLALAA*RKAFGL
Trigger: CAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAG...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGCTGCTGCCTCGCTTTaGCTGCCTGGAGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRAAASL*LPGGRL
Trigger: AAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTCTTCTGTTCTTTGGTaGCAACATTCTCGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTSSVLW*QHSRSR
Trigger: CCGAGAGCGAGAATGTTGCCACCAAAGAACAGAAGA...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGACAGCTTTGGACACTTTaGGTTTTCTCCCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRQLWTL*VFSPFE
Trigger: CTCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTG...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGAGGCTGCTCAGCTTTaGACACTTTGGGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCEAAQL*TLWVFS
Trigger: GGAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTGTCAGTGGTGGTGGTaGCCAGCTTCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWCQWWW*PASPEP
Trigger: TGGTTCTGGGGAAGCTGGCCACCACCACCACTGACA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTATGATGGGTGAACTTTaGAACCGAGCTGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTMMGEL*NRAGVS
Trigger: ACTGACACCAGCTCGGTTCCAAAGTTCACCCATCAT...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGGCTTCTTCTTGTGCTTaGAGAGGTTGCTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTEASSCA*RGCCWW
Trigger: CCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGC...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACTCCTTGAAGTGGACATaGATGTGGTCCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDSLKWT*MWSLST
Trigger: TGTGCTCAGGGACCACATCCATGTCCACTTCAAGGA...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCCTTGAAGTGGACATaGATGTGGTCCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSLKWT*MWSLST
Trigger: TGTGCTCAGGGACCACATCCATGTCCACTTCAAGGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGAAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRNSSLW*SSINAM
Trigger: CATCGCGTTGATGGATGACCACCAGAGGGAAGAGTT...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCG +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHINSSL*WSSINA
Trigger: CGCGTTGATGGATGACCACCAGAGGGAAGAGTTTAT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTGTGGGCGTGGTAGGTaGCCTTCAGTGCAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASCGRGR*PSVQSA
Trigger: GGCGCTTTGCACTGAAGGCCACCTACCACGCCCACA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGTGGGCGTGGTAGGTaGCCTTCAGTGCAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLCGRGR*PSVQSA
Trigger: GGCGCTTTGCACTGAAGGCCACCTACCACGCCCACA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCGGCGCAGCGCGTGCTTaGTCTTCATGCCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLGAARA*SSCLSH
Trigger: GTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCC...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTC +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRVVSGR*SRSSIL
Trigger: GAGGATCGATGACCTGGACCACCTCCCGGAGACCAC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATAGGAGGCGTCGATGGTaGTGGTCTCCGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDRRRRW*WSPGGG
Trigger: ACCACCTCCCGGAGACCACCACCATCGACGCCTCCT...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGCTGGACGATGCCAATaGAGGAGGCGTCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYAGRCQ*RRRRWW
Trigger: CCACCATCGACGCCTCCTCCATTGGCATCGTCCAGC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAAGAGTCAGCTCAGGCTaGACGATGCCAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARRVSSG*TMPMEE
Trigger: CTCCTCCATTGGCATCGTCCAGCCTGAGCTGACTCT...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGATCTGGACGTCATTTTaGCGGTTGTGCAACATGGCA +
Preference number: 4 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRIWTSF*RLCNMA
Trigger: TGCCATGTTGCACAACCGCCAAAATGACGTCCAGAT...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAGGCTGGGGGTGGATCTaGACGTCATTTTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRGWGWI*TSFWRL
Trigger: CAACCGCCAAAATGACGTCCAGATCCACCCCCAGCC...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACGTCAGGTTGATGAAATaGGCCACAGACTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHVRLMK*ATDCGF
Trigger: GAACCCACAGTCTGTGGCCCATTTCATCAACCTGAC...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGACTGCGGCTGCGAGGGTaGCAAGACGTCAGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRLRLRG*QDVSLG
Trigger: CCCCAGACTGACGTCTTGCCACCCTCGCAGCCGCAG...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATGCTCCGCCTGCACCTaGGGCTGGGCCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRCSACT*GWAACC
Trigger: ACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGATGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTCACGGTCAGGATTGAGTTGTCCAGCTGTAACTGGCGTTCAGGGGTGGTAAGGTGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: VTVRIELSSCNWRSGVVRCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...CCTTACCACCCCTGAACGCCAGTTACAGCTGGACAACTCAATCCTGACCGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACTCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATGCCTTGGTAAGGCATaGTGTGGAGCCCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARCLGKA*CGAPSS
Trigger: ACTGGATGGGGCTCCACACCATGCCTTACCAAGGCA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGCGACCCTCTGCATCTaGGCAGCTGTGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRATLCI*AAVKGG
Trigger: TCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGCGACCCTCTGCATCTaGGCAGCTGTGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRATLCI*AAVKGG
Trigger: TCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGAATGGATACATTTaGATTGCAGAGAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: THSRATLCIWAAVKGGQGQNGYI*IAENPE
Trigger: CTCAGGATTCTCTGCAATCCAAATGTATCCATTCTG...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACCATCCTTTGTTCTGCTaGCAACATCAGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHHPLFC*QHQDCS
Trigger: GGAGCAGTCCTGATGTTGCCAGCAGAACAAAGGATG...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGAGGACTCTTCTGCCTaGGTGGTACATGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMEDSSA*VVHGCC
Trigger: ACAACAACCATGTACCACCCAGGCAGAAGAGTCCTC...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGAAATTCTCCACTGAGATaGGTCCACAGAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRNSPLR*VHRAWW
Trigger: CCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATT...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGACAGAACGTTTTCCTGTaGCCTCCCCGCAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARQNVFL*PPRKTH
Trigger: GTGAGTCTTGCGGGGAGGCCACAGGAAAACGTTCTG...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000447016.6
3UTR CAA 72 bp CGTTTTGAGCTGGAGTCAGTGACCTCACGTGACCCCTaGCACATGATGACCGTGATGACCTCGAAGGTTGCA +
Preference number: 4 (lower is better)
Translates to: RFELESVTSRDP*HMMTVMTSKVA
Trigger: TGCAACCTTCGAGGTCATCACGGTCATCATGTGCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
3UTR CAA 72 bp ATGAAATCTTTAATCCCCGTGTGCCGCTTGCAGTGCTaGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGG +
Preference number: 4 (lower is better)
Translates to: MKSLIPVCRLQC*SMLTFCANLRW
Trigger: CCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGATTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCCCAGAACCAGCTCCATaGTCCGCTCATCTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRPEPAP*SAHLAL
Trigger: CAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGG...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCATGGATGTGGTCCCTaGGCACATCCACGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLHGCGP*AHPRGR
Trigger: TCTTCCGCGTGGATGTGCTCAGGGACCACATCCATG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGACCTTGTGCACCTCCATaGTGTGCTTCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARPCAPP*CASGTP
Trigger: AGGAGTACCTGAAGCACATCATGGAGGTGCACAAGG...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCAGGTTCCCGATGCTGTTaGAGATCCGCCCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPGSRCC*RSARRS
Trigger: AGATCTGCGGGCGGATCTTCAACAGCATCGGGAACC...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACCGGGTGGTGTTCCTCTCGCTaGATGTCTTCCCACACAATT +
Preference number: 4 (lower is better)
Translates to: SRCLFILLRQENTLPHTGWCSSR*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGCGAGAGGAACACCA...CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATGCCCACTGTGTGGATaGGCTTGTGGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRCPLCG*ACGSPW
Trigger: CCATGGAGACCCACAAGCTCATCCACACAGTGGGCA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTGCCCACTGTGTGGATaGGCTTGTGGGTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYCPLCG*ACGSPW
Trigger: CCATGGAGACCCACAAGCTCATCCACACAGTGGGCA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGAGATTGGTAAACTaGGTCGCGGCCGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLWRLVN*VAAAVV
Trigger: CACCACTGCGGCCGCGACTCAGTTTACCAATCTCCA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTACTGGTACACAGACGTaGCAGCACGTGTCCCCGCAC +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTTGTQT*QHVSPH
Trigger: GTGCGGGGACACGTGCTGTCACGTCTGTGTACCAGT...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGCCCTGGTCTCCTGCTaGTTCCATGGATGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTALVSC*FHGCLE
Trigger: CTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGTGGGTGTTTCGTCATaGGCCCAAAGCCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRVGVSS*AQSPLG
Trigger: TCCCAACGGGCTTTGGGCTCATGACGAAACACCCAC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCCTAGTGGGGAAGCCATaGGCCTTCCGCCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRLVGKP*AFRLWM
Trigger: CATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAG...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGTTTTCTGGGGTGCCTaGAGCGTGGACGCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRVFWGA*SVDARA
Trigger: GGCTCTGGCGTCCACGCTGCAGGCACCCCAGAAAAC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATGTTCATTGAGGAGCTaGAGCTCCAGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARCSLRS*SSRKVA
Trigger: TGCCACCTTCCTGGAGCTGCAGCTCCTCAATGAACA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACACGATGACTAGAGGCTaGTCAGCTTTGGACACTTTG +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHTMTRG*SALDTL
Trigger: CAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGT...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAAACAGCTTGTCACCATaGGAGCGCACGTGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRNSLSP*ERTCLL
Trigger: GAGCAGGCACGTGCGCTCGCATGGTGACAAGCTGTT...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACCCAGCGCGCTCTCGATaGGGAAGGTCTTCTCACAAG +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYPARSR*GRSSHK
Trigger: CTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGG...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGAACTTCTTGTCGCCGTaGTTCTTCTTGTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWNFLSP*FFLCLE
Trigger: CTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTT...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGGGTAGAACATCTTGCTaGAGACCTCACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWGRTSC*RPHRQT
Trigger: AGTTTGCCTGTGAGGTCTGCAGCAAGATGTTCTACC...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGTGAGGCTCCGAGTCTaGGCTCTCGTCAGAATTGTC +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWVRLRV*ALVRIV
Trigger: GACAATTCTGACGAGAGCGCAGACTCGGAGCCTCAC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGATCCTTGATGCCCTTGTaGAGCTTCATGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRSLMPL*SFMWWR
Trigger: GCGCCACCACATGAAGCTGCACAAGGGCATCAAGGA...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTATCCTTGATGCCCTTGTaGAGCTTCATGTGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALSLMPL*SFMWWR
Trigger: GCGCCACCACATGAAGCTGCACAAGGGCATCAAGGA...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCACAGCTGGCAGCTCTaGGCCTCCACCTTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTHSWQL*ASTLSC
Trigger: ACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACGCTCAGGCTGGACGATaGCAATGGAGGAGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHAQAGR*QWRRRR
Trigger: TCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGC...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCATCGGCCAAATCCTCCTaGTCCAGAGTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPSAKSS*SRVSSG
Trigger: GCCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGA...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTCCTTGAAGTGGACATGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTTCTGAATGCTCTGTACTaGGGAATTGGTCTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: VLEVDMDVVPEHIHAEELLNALY*GIGLVA
Trigger: GGCGACGAGACCAATTCCGCAGTACAGAGCATTCAG...AAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGACGCCACGTGAGCGGGTaGTGGTCACTAAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRRHVSG*WSLSWL
Trigger: GAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCG...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTGCTGTGGGGGTGCCTaGGGCTGCGAGGGTGGCAAG +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANCCGGA*GCEGGK
Trigger: CTTGCCACCCTCGCAGCCGCAGGCACCCCCACAGCA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATCCCAAACATCCCTCTaGAGTTCTTGCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARSQTSL*SSCPES
Trigger: AGACTCGGGGCAAGAACTGCAGAGGGATGTTTGGGA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGTTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAGATGACCTCGAAGGTTaGAGGATCAGGTGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRDDLEG*RIRCGS
Trigger: TGAGCCGCACCTGATCCTGCAACCTTCGAGGTCATC...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTTGCCCTTTAGATTCTaGAAAGGCAAAAAGAAATCG +
Preference number: 4 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGALPFRF*KGKKKS
Trigger: CGATTTCTTTTTGCCTTTGCAGAATCTAAAGGGCAA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTCCTTGAAGTGGACATGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTTCCCGTTGGGAGTCTCTaGGAGGTCATTTGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: VLEVDMDVVPEHIHAEELPVGSL*EVICPL
Trigger: TAAAGGGCAAATGACCTCGCAGAGACTCCCAACGGG...AAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATGCAGTCATCCTCGTTaGAGGTGTCGAAGCACACGG +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGCSHPR*RCRSTR
Trigger: CCGTGTGCTTCGACACCTCCAACGAGGATGACTGCA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAGGGGTGCCTGCAGCGTaGACGCCAGAGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEGVPAA*TPEPAC
Trigger: GCAGGCCGGCTCTGGCGTCCACGCTGCAGGCACCCC...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGGGGTGCCTGCAGCGTaGACGCCAGAGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLGVPAA*TPEPAC
Trigger: GCAGGCCGGCTCTGGCGTCCACGCTGCAGGCACCCC...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTACTTTACACGCCCACTaGCTGGGCTCCGACTCCACG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTTLHAH*LGSDST
Trigger: CGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTAAAGT...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATACTTTACACGCCCACTaGCTGGGCTCCGACTCCACG +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDTLHAH*LGSDST
Trigger: CGTGGAGTCGGAGCCCAGCCAGTGGGCGTGTAAAGT...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAGCAGCTCCAGGAAGGTaGCAGAACACACTTTACACG +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARAAPGR*QNTLYT
Trigger: CGTGTAAAGTGTGTTCTGCCACCTTCCTGGAGCTGC...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTTGGCTTGTTCTAAGTaGCCCAACAGATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPLACSK*PNRCSL
Trigger: CAATGAACATCTGTTGGGCCACTTAGAACAAGCCAA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCTTCTGTTCTTTGGTaGCAACATTCTCGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSSVLW*QHSRSR
Trigger: CCGAGAGCGAGAATGTTGCCACCAAAGAACAGAAGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTTTTCTTCTGTTCTTTaGTGGCAACATTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: AQSHAGHSEAALGTERFPFSSVL*WQHSRS
Trigger: AGAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACATGATCCGCTCATCTaGCGTTGCACTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRHDPLI*RCTHRL
Trigger: GAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCTGTCAGTGGTGGTGGTaGCCAGCTTCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRCQWWW*PASPEP
Trigger: TGGTTCTGGGGAAGCTGGCCACCACCACCACTGACA...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTTGTGGGCGTGGTAGGTaGCCTTCAGTGCAAAGCGCC +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTCGRGR*PSVQSA
Trigger: GGCGCTTTGCACTGAAGGCCACCTACCACGCCCACA...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCACTGCTCGCAGGCGTaGCTCTTCACACCTGTGTGG +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLHCSQA*LFTPVW
Trigger: CCACACAGGTGTGAAGAGCCACGCCTGCGAGCAGTG...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGGCGCAGCGCGTGCTTaGTCTTCATGCCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTGAARA*SSCLSH
Trigger: GTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTC +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLVVSGR*SRSSIL
Trigger: GAGGATCGATGACCTGGACCACCTCCCGGAGACCAC...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGGCTGGGGGTGGATCTaGACGTCATTTTGGCGGTTG +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASGWGWI*TSFWRL
Trigger: CAACCGCCAAAATGACGTCCAGATCCACCCCCAGCC...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACTGCTGGTCACTAAGCTaGCTCCCCAGGGGCGTGATG +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHCWSLS*LPRGVM
Trigger: CATCACGCCCCTGGGGAGCCAGCTTAGTGACCAGCA...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGCAGAATGGATACATTTaGATTGCAGAGAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: AAVPVASPQDSHQWMALEQNGYI*IAENPE
Trigger: CTCAGGATTCTCTGCAATCCAAATGTATCCATTCTG...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGGGCTTCAGCCAGAATaGATACATTTGGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHGLQPE*IHLDCR
Trigger: TCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGGGGCTTCAGCCAGAATaGATACATTTGGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRGLQPE*IHLDCR
Trigger: TCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCC...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACCGCACACGCAGACCTaGCTGTTCACCGCACATTCA +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRPHTQT*LFTAHS
Trigger: TGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACGAGCAGCTGTACCTGTaGCCTCCCCGCAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHEQLYL*PPRKTH
Trigger: GTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGCTC...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACCAACAGATGTTCATTaGGGAGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRPTDVH*GAAAPG
Trigger: TCCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGCCTTGTCTTCCACGATaGCTAGAGGCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWPCLPR*LEAAQL
Trigger: AAGCTGAGCAGCCTCTAGTCATCGTGGAAGACAAGG...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGATCTTGTCGCCGTGGGTaGGCAGGTGCTTGTTCATAT +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRSCRRG*AGACSY
Trigger: ATATGAACAAGCACCTGCTCACCCACGGCGACAAGA...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDLQLYL*GSESAL
Trigger: GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAA...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTCCACCTTGTCGTGTGTaGGCTGAACGTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASPPCRV*AERASA
Trigger: TGCAGAAGCACGTTCAGCTCACACACGACAAGGTGG...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCGCCTACACTGCCTGTaGACTCCGTCTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLRLHCL*TPSLSL
Trigger: CAGAGAAAGAGACGGAGTTCACAGGCAGTGTAGGCG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGTCACCACTACCTGCTaGATGCTCTGTACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALVTTTC*MLCTAE
Trigger: TTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGAC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTTGGAGATTGGTAAACTaGGTCGCGGCCGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTWRLVN*VAAAVV
Trigger: CACCACTGCGGCCGCGACTCAGTTTACCAATCTCCA...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGTTTGGAGTGAAGTGCTaGGAAAGTTGCGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRFGVKC*ESCVLK
Trigger: TTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAA...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATGTGGGTGTTTCGTCATaGGCCCAAAGCCCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDVGVSS*AQSPLG
Trigger: TCCCAACGGGCTTTGGGCTCATGACGAAACACCCAC...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATCATACAACCTGATGTaGCAGGAAATACAGCCAACA +
Preference number: 4 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTSYNLM*QEIQPT
Trigger: TGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACCGTCATCATACAACCTaGTGTGACAGGAAATACAGC +
Preference number: 4 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDRHHTT*CDRKYS
Trigger: GCTGTATTTCCTGTCACATCAGGTTGTATGATGACG...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGCCGTCAGGTTCTGGTaGTCGGCCTCCGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSAVRFW*SASAAG
Trigger: GCCAGCGGCGGAGGCCGAGCACCAGAACCTGACGGC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTGTTCATTGAGGAGCTaGAGCTCCAGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWCSLRS*SSRKVA
Trigger: TGCCACCTTCCTGGAGCTGCAGCTCCTCAATGAACA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACGTGCCTGCTCAGGTTaGTGCTGTTCTGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRRACSG*CCSGRS
Trigger: AGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATCCAGCGCGCTCTCGATaGGGAAGGTCTTCTCACAAG +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDPARSR*GRSSHK
Trigger: CTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGG...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGACCGTGCTTCTTCTTGTaGTTGGAGAGGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARPCFFL*LERLLL
Trigger: CAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGG...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR GCA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGGGTAGAACATCTTGCTaGAGACCTCACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMGRTSC*RPHRQT
Trigger: AGTTTGCCTGTGAGGTCTGCAGCAAGATGTTCTACC...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAGGTGCTTGTTCATATTaGTCCGGCAGGAGAACACCT +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARGACSY*SGRRTP
Trigger: AGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACC...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCCGTGGGTGAGCAGGTaGTTGTTCATATTGCTCCGG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLPWVSR*LFILLR
Trigger: CCGGAGCAATATGAACAAGCACCTGCTCACCCACGG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTGAGGCTCCGAGTCTaGGCTCTCGTCAGAATTGTC +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASVRLRV*ALVRIV
Trigger: GACAATTCTGACGAGAGCGCAGACTCGGAGCCTCAC...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACACGTGCTTGGTCTTCATaGCTTTCCCACACTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTRAWSS*LSHTRH
Trigger: GTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACG...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGCACCTCGGGGTGCTTaGGCCGCATGTGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRAPRGA*AACVGS
Trigger: TGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGCTCAGGCTGGACGATaGCAATGGAGGAGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRAQAGR*QWRRRR
Trigger: TCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACTCGGCCAAATCCTCCTaGTCCAGAGTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHSAKSS*SRVSSG
Trigger: GCCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGA...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTACTGAATGCTCTGTACTaGGGAATTGGTCTCGTCGCC +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALLNALY*GIGLVA
Trigger: GGCGACGAGACCAATTCCGCAGTACAGAGCATTCAG...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTCCTTGAAGTGGACATGGATGTGGTCCCTGAGCACATCCACGCGGAAGAACTTCCACTACCTGCTGAATaGTCTGTACTGCGGAATTGG +
Preference number: 4 (lower is better)
Translates to: VLEVDMDVVPEHIHAEELPLPAE*SVLRNW
Trigger: CCAATTCCGCAGTACAGAGCATTCAGCAGGTAGTGG...AAGTTCTTCCGCGTGGATGTGCTCAGGGACCACATCCATGTCCACTTCAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCGTCAGTCTGGGGCACTaGCCGCCACGTGAGCGGGTG +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISVSLGH*PPRERV
Trigger: CACCCGCTCACGTGGCGGGCAGTGCCCCAGACTGAC...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCGGGGGTGCCTGCGGCTaGGAGGGTGGCAAGACGTCA +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTGGACG*EGGKTS
Trigger: TGACGTCTTGCCACCCTCGCAGCCGCAGGCACCCCC...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTATCTGCTGCTGCTGCTaGTCCGCCTGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISICCCC*SACTWG
Trigger: GCCCCAGGTGCAGGCGGAGCAGCAGCAGCAGCAGAT...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACACAGACCGTAATGGTTaGTGGCGGGGGATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYTDRNG*WRGIWR
Trigger: TCTCCAGATCCCCCGCCAGCAACCATTACGGTCTGT...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGAAATCATCCTTTGTTCTaGTGGCAACATCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRNHPLF*WQHQDC
Trigger: GCAGTCCTGATGTTGCCAGCAGAACAAAGGATGATT...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGACCCTCCTGCATGCTaGCTGGGGATGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRDPPAC*LGMNIP
Trigger: AGGAATGTTCATCCCCAGGCAGCATGCAGGAGGGTC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGCTCTGCGAGGTCATTTaGCCTTTAGATTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGLCEVI*PLDSAK
Trigger: CTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAG...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTCCAGCGCAGTCCCATaGCGGACACAGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISSSAVP*RTQRGG
Trigger: GCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTTTGACCATGACCACTaGGCCCAGCTCGGGACATTC +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYFDHDH*AQLGTF
Trigger: GAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAATTTGGCGACCCTCCTaGACTCAAAGGGACCGAACT +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALIWRPS*TQRDRT
Trigger: AGTTCGGTCCCTTTGAGTCCAGGAGGGTCGCCAAAT...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGGGGTGCCTGCAGCGTaGACGCCAGAGCCGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLGVPAA*TPEPAC
Trigger: GCAGGCCGGCTCTGGCGTCCACGCTGCAGGCACCCC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGCAGCTCCAGGAAGGTaGCAGAACACACTTTACACG +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWAAPGR*QNTLYT
Trigger: CGTGTAAAGTGTGTTCTGCCACCTTCCTGGAGCTGC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGCAGCTCCAGGAAGGTaGCAGAACACACTTTACACG +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALAAPGR*QNTLYT
Trigger: CGTGTAAAGTGTGTTCTGCCACCTTCCTGGAGCTGC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCTCGCTTTGGCTGCCTaGAGGAAGGCTTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLLALAA*RKAFGL
Trigger: CAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAGAGGCTGCTCAGCTTTaGACACTTTGGGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPAREAAQL*TLWVFS
Trigger: GGAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTC...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGCTGCCACTTGCTCTGTaGGTTCCTTGTCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWLPLAL*VPCLPR
Trigger: TCGTGGAAGACAAGGAACCCACAGAGCAAGTGGCAG...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGTGTCAGTGGTGGTGGTaGCCAGCTTCCCCAGAACCA +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLCQWWW*PASPEP
Trigger: TGGTTCTGGGGAAGCTGGCCACCACCACCACTGACA...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTCTGTCCTGCAGTTGTaGAACTCCAGCGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDSVLQL*NSSALS
Trigger: CGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGA...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACGTGTGGATGAGCTTGTaGCGCTCCAGGTTCCCGATG +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHVWMSL*RSRFPM
Trigger: CATCGGGAACCTGGAGCGCCACAAGCTCATCCACAC...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATGCGCGAACCTGCGGTaGCACTCCTTGCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRCANLR*HSLHSY
Trigger: GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGCTGGACGATGCCAATaGAGGAGGCGTCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRAGRCQ*RRRRWW
Trigger: CCACCATCGACGCCTCCTCCATTGGCATCGTCCAGC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATGGTGTGGTCACATTTaGGTCACCCAGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRWCGHI*VTQGHH
Trigger: GTGGTGACCCTGGGTGACCCAAATGTGACCACACCA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGGCTTCCGGCTGGGGGTaGATCTGGACGTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLASGWG*IWTSFW
Trigger: CCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGC...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGCTTCCGGCTGGGGGTaGATCTGGACGTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTASGWG*IWTSFW
Trigger: CCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACTGCTCCGCCTGCACCTaGGGCTGGGCCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYCSACT*GWAACC
Trigger: ACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCA...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGCCTTGGTAAGGCATaGTGTGGAGCCCCATCCAGT +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLCLGKA*CGAPSS
Trigger: ACTGGATGGGGCTCCACACCATGCCTTACCAAGGCA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GAATTGTCATCGTTTTCTTCCGAGGAGATCCCGATCTTGCCGATAAACTCTTCCGCGACCCTCTGCATCTaGGCAGCTGTGAAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ELSSFSSEEIPILPINSSATLCI*AAVKGG
Trigger: TCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGC...GGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGGGGCTTCAGCCAGAATaGATACATTTGGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGGLQPE*IHLDCR
Trigger: TCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCC...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCTGCCCCCGAAACTaGTACACAGACGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTPCPRN*YTDVTA
Trigger: TGCTGTCACGTCTGTGTACCAGTTTCGGGGGCAGGG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGGGCAGCAGGAGGGCTaGGTGCCTCCCCCAACCCTG +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLGQQEG*VPPPTL
Trigger: CAGGGTTGGGGGAGGCACCCAGCCCTCCTGCTGCCC...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGACATCCTTTGTTCTGCTaGCAACATCAGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARHPLFC*QHQDCS
Trigger: GGAGCAGTCCTGATGTTGCCAGCAGAACAAAGGATG...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCCTTGTATCTGGAGAATaGAGACAATATCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSLVSGE*RQYHPK
Trigger: CTTGGGGTGATATTGTCTCCATTCTCCAGATACAAG...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGCTTGTATCTGGAGAATaGAGACAATATCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRLVSGE*RQYHPK
Trigger: CTTGGGGTGATATTGTCTCCATTCTCCAGATACAAG...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTGCCTGGGTGGTACATaGTTGTTGTATTTTGCTATC +
Preference number: 4 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHCLGGT*LLYFAI
Trigger: GATAGCAAAATACAACAACCATGTACCACCCAGGCA...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGCCTGGGTGGTACATaGTTGTTGTATTTTGCTATC +
Preference number: 4 (lower is better)
Translates to: WHSSPQLHGATGPKRILHCLGGT*LLYFAI
Trigger: GATAGCAAAATACAACAACCATGTACCACCCAGGCA...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCACTCTTCTGCCTGGGTaGTACATGGTTGTTGTATTT +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSTLLPG*YMVVVF
Trigger: AAATACAACAACCATGTACCACCCAGGCAGAAGAGT...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTCCACAGAGCCTGGTaGCCACAATGGCTGGATCTA +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASVHRAW*PQWLDL
Trigger: TAGATCCAGCCATTGTGGCCACCAGGCTCTGTGGAC...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACAACTCACACCAGTGGATaGCACTCGAGTCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTTHTSG*HSSPQL
Trigger: CAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGT...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACCTTTCACAATCCAATaGGAAAGCCCAAGACGCCGC +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRPFTIQ*ESPRRR
Trigger: GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACAGTTTTGGAACCGAGCTaGTGTCAGTGGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTVLEPS*CQWWWW
Trigger: CCACCACCACCACTGACACCAGCTCGGTTCCAAAAC...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS-3UTR TCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACCAACAGATGTTCATTaGGGAGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRPTDVH*GAAAPG
Trigger: TCCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCCAACAGATGTTCATTaGGGAGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLPTDVH*GAAAPG
Trigger: TCCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGACCAGAACCAGCTCCATaGTCCGCTCATCTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRPEPAP*SAHLAL
Trigger: CAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGG...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAGGCTCTCTTTGCGGCTaGACAATTTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARGSLCG*TILHTL
Trigger: AAGAGTGTGCAAAATTGTTCAGCCGCAAAGAGAGCC...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCCTTGTGCACCTCCATaGTGTGCTTCAGGTACTCCT +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLPCAPP*CASGTP
Trigger: AGGAGTACCTGAAGCACATCATGGAGGTGCACAAGG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLLSCVS*TCFCSM
Trigger: CATGCTGCAGAAGCACGTTCAGCTCACACACGACAA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GATAAACTCTTCCCTCTGGTGGTCATCCATCAACGCGATGTCCTTGAAGTGGACTTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: DKLFPLVVIHQRDVLEVDLSCVS*TCFCSM
Trigger: CATGCTGCAGAAGCACGTTCAGCTCACACACGACAA...GTCCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTACACTATTCATTCAACTaGGAGGTGAGAGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALHYSFN*EVRARR
Trigger: GCGCCTAGCTCTCACCTCTCAGTTGAATGAATAGTG...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCTTCTTTAACAACATTTaGTGCGGTCTTACTCTAGGC +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSFFNNI*CGLTLG
Trigger: GCCTAGAGTAAGACCGCATCAAATGTTGTTAAAGAA...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTAGAACTGCGTATAGGTaGGGACTCTTCTGCCTGGGT +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASRTAYR*GLFCLG
Trigger: ACCCAGGCAGAAGAGTCCTCACCTATACGCAGTTCT...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAAAACGAATTCTCCACTaGGATGGGTCCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRKRILH*DGSTEP
Trigger: AGGCTCTGTGGACCCATCTCAGTGGAGAATTCGTTT...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGCCGTCAGGTTCTGGTaGTCGGCCTCCGCCGCTGGC +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLAVRFW*SASAAG
Trigger: GCCAGCGGCGGAGGCCGAGCACCAGAACCTGACGGC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAATGATCTCTGCCACTTaGTCTGTGGGTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARMISAT*SVGSLS
Trigger: AGACAAGGAACCCACAGAGCAAGTGGCAGAGATCAT...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCGGCACACAGGTACTCGCGGACATTGTCGTGCACACGCATGTGCTCCTTCAGCTCTGGAAGATCTTGCTaGAGATATTGCACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SAHRYSRTLSCTRMCSFSSGRSC*RYCTGK
Trigger: TTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGA...GCTGAAGGAGCACATGCGTGTGCACGACAATGTCCGCGAGTACCTGTGTGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GATAAACTCTTCCCTCTGGTGGTCATCCATCAACGCGATGTCCTTGAAGTGGACCGTCCACCTCGTTCCTaGTGTGCTTGTAGGAAACGT +
Preference number: 4 (lower is better)
Translates to: DKLFPLVVIHQRDVLEVDRPPRS*CACRKR
Trigger: ACGTTTCCTACAAGCACAGCAGGAACGAGGTGGACG...GTCCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACCGTCCACCTCGTTCCTaGTGTGCTTGTAGGAAACGT +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYRPPRS*CACRKR
Trigger: ACGTTTCCTACAAGCACAGCAGGAACGAGGTGGACG...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGACCAGCGCGCTCTCGATaGGGAAGGTCTTCTCACAAG +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRPARSR*GRSSHK
Trigger: CTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGG...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATGTGCTTGGAGAGGTTaGTGTTGGTGGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARCAWRG*CWWRRI
Trigger: GATTCTTCTCCACCAACAGCAACCTCTCCAAGCACA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR GCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACCACGCGGAAGAACTTaGGCCCGCAGATCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRPRGRT*ARRSRR
Trigger: CCTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGG...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACGTGAGGCTCCGAGTCTaGGCTCTCGTCAGAATTGTC +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHVRLRV*ALVRIV
Trigger: GACAATTCTGACGAGAGCGCAGACTCGGAGCCTCAC...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGGTAGGTGGCCTTCAGTaGAAAGCGCCGGTTGCAGAT +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLVGGLQ*KAPVAD
Trigger: ATCTGCAACCGGCGCTTTGCACTGAAGGCCACCTAC...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTCGTGCACACGCATGTaGTCCTTCAGCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASSCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAGGAGCACATGCGTGTGCACGA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCGTGCTTGGTCTTCATaGCTTTCCCACACTCGGCAC +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTRAWSS*LSHTRH
Trigger: GTGCCGAGTGTGGGAAAGGCATGAAGACCAAGCACG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAGCATGTTGACCTTCTaGGCGAACCTGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRSMLTF*ANLRWH
Trigger: GTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCT...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAACGGAGCACGTCCACTaGTTGCCCACTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRTEHVH*LPTVWM
Trigger: CATCCACACAGTGGGCAAGCAGTGGACGTGCTCCGT...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGACCCTCCTGCATGCTaGCTGGGGATGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTDPPAC*LGMNIP
Trigger: AGGAATGTTCATCCCCAGGCAGCATGCAGGAGGGTC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTGCCCTTTAGATTCTaGAAAGGCAAAAAGAAATCG +
Preference number: 4 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPLPFRF*KGKKKS
Trigger: CGATTTCTTTTTGCCTTTGCAGAATCTAAAGGGCAA...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACCCCGTTGGGAGTCTCTaGGAGGTCATTTGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYPVGSL*EVICPL
Trigger: TAAAGGGCAAATGACCTCGCAGAGACTCCCAACGGG...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTCCAGCGCAGTCCCATaGCGGACACAGCGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSSSAVP*RTQRGG
Trigger: GCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACGAGGTACAGGAGGTCTaGCTTCCACGCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANEVQEV*LPRRTL
Trigger: GAGGGTCCGGCGTGGAAGGCAGACCTCCTGTACCTC...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGGACATTCGGAGTCGTaGTACTGGCTGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYGHSES*YWLQSS
Trigger: TGAAGACTGCAGCCAGTACCACGACTCCGAATGTCC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTCTCGGCCTCCGCCGCTaGCCGCACCAGCATCATCCA +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSLGLRR*PHQHHP
Trigger: TGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGAG...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGCAGCTCCAGGAAGGTaGCAGAACACACTTTACACG +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRAAPGR*QNTLYT
Trigger: CGTGTAAAGTGTGTTCTGCCACCTTCCTGGAGCTGC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGCTGGAGGAAGGCTTTTaGCTTGTTCTAAGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWLEEGF*LVLSGP
Trigger: TGGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAG...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATCTTCTGTTCTTTGGTaGCAACATTCTCGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARSSVLW*QHSRSR
Trigger: CCGAGAGCGAGAATGTTGCCACCAAAGAACAGAAGA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGCTTCTTCTTGTGCTTaGAGAGGTTGCTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWASSCA*RGCCWW
Trigger: CCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR CCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTAGGTGCCGGCGCTGGTaGTCCAGCATGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISRCRRW*SSMTSL
Trigger: CAAGGACGTCATGCTGGACCACCAGCGCCGGCACCT...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTACTTCTTGTCGCCGTaGGTGAGCAGGTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTCACCCACGGCGACAAGAAGTA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCG +
Preference number: 4 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARINSSL*WSSINA
Trigger: CGCGTTGATGGATGACCACCAGAGGGAAGAGTTTAT...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCAGATCTCGCAGGGGTaGATGTACTTCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLQISQG*MYFCTL
Trigger: CAACGTGCAGAAGTACATCCACCCCTGCGAGATCTG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCGTGTGGATGAGCTTGTaGGTCTCCATGGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLVWMSL*VSMVFL
Trigger: GAGGAACACCATGGAGACCCACAAGCTCATCCACAC...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCCCCTGGTGGACACCTTaGTCCCGCACAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISPWWTP*SRTAGS
Trigger: GCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGG...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCATCTTGTGACTTCGCTTaGCAGCTTTCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPSCDFA*QLSRAS
Trigger: GGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGA...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATCTGTACTGCGGAATTaGTCTCGTCGCCTACACTGC +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRSVLRN*SRRLHC
Trigger: GCAGTGTAGGCGACGAGACCAATTCCGCAGTACAGA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACTGGTGTGGTCACATTTaGGTCACCCAGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHWCGHI*VTQGHH
Trigger: GTGGTGACCCTGGGTGACCCAAATGTGACCACACCA...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACCTGAGCTCGATGGTGTaGTCACATTTGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYLSSMV*SHLGHP
Trigger: TGGGTGACCCAAATGTGACCACACCATCGAGCTCAG...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGCTTCCGGCTGGGGGTaGATCTGGACGTCATTTTGG +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRASGWG*IWTSFW
Trigger: CCAAAATGACGTCCAGATCCACCCCCAGCCGGAAGC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACACGTGAGCGGGTGCTaGTCACTAAGCTGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRHVSGC*SLSWLP
Trigger: GGGGAGCCAGCTTAGTGACCAGCACCCGCTCACGTG...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATGCTCCGCCTGCACCTaGGGCTGGGCCGCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKCSACT*GWAACC
Trigger: ACAGCAGGCGGCCCAGCCCCAGGTGCAGGCGGAGCA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTCTGACACCTGCCTTTaGAATGTGCAGAGCGGGATC +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLSDTCL*NVQSGI
Trigger: GATCCCGCTCTGCACATTCCAAAGGCAGGTGTCAGA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTCTGACACCTGCCTTTaGAATGTGCAGAGCGGGATC +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASSDTCL*NVQSGI
Trigger: GATCCCGCTCTGCACATTCCAAAGGCAGGTGTCAGA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GATAAACTCTTCCCTCTGGTGGTCATCCATCAACGCGATGTCCTTGAAGTGGACTCTGACACCTGCCTTTaGAATGTGCAGAGCGGGATC +
Preference number: 4 (lower is better)
Translates to: DKLFPLVVIHQRDVLEVDSDTCL*NVQSGI
Trigger: GATCCCGCTCTGCACATTCCAAAGGCAGGTGTCAGA...GTCCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTTCCACTCGGGATTCTaGCTGGGCTTCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLFHSGF*LGFSQN
Trigger: ATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTTCCACTCGGGATTCTaGCTGGGCTTCAGCCAGAAT +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYFHSGF*LGFSQN
Trigger: ATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACTCCTGCTGATTCCATaGATGCCTGGAGCACTTGTA +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRLLLIP*MPGALV
Trigger: TACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACAGCCTGGTGGCCACAATaGCTGGATCTAATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTAWWPQ*LDLMSS
Trigger: GGAAGACATTAGATCCAGCCATTGTGGCCACCAGGC...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCAATTCTCCACTGAGATaGGTCCACAGAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRNSPLR*VHRAWW
Trigger: CCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATT...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCCTTTCACAATCCAATaGGAAAGCCCAAGACGCCGC +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLPFTIQ*ESPRRR
Trigger: GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GATAAACTCTTCCCTCTGGTGGTCATCCATCAACGCGATGTCCTTGAAGTGGACCATCTTCCAGTCGTCTaGTCTCCAAGTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: DKLFPLVVIHQRDVLEVDHLPVV*SPSWEE
Trigger: TTCCTCCCAACTTGGAGATCAGACGACTGGAAGATG...GTCCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCATCTTCCAGTCGTCTaGTCTCCAAGTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLHLPVV*SPSWEE
Trigger: TTCCTCCCAACTTGGAGATCAGACGACTGGAAGATG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTTTTGGAGTGAAGTGCTaGGAAAGTTGCGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCFGVKC*ESCVLK
Trigger: TTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAA...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGTCTGCTGTTTGGAGTaGAGTGCTGAGAAAGTTGCG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRVCCLE*SAEKVA
Trigger: CGCAACTTTCTCAGCACTTCACTCCAAACAGCAGAC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCGTCTGCTGTTTGGAGTaGAGTGCTGAGAAAGTTGCG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLVCCLE*SAEKVA
Trigger: CGCAACTTTCTCAGCACTTCACTCCAAACAGCAGAC...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACACACTATTCATTCAACTaGGAGGTGAGAGCTAGGCGC +
Preference number: 4 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTHYSFN*EVRARR
Trigger: GCGCCTAGCTCTCACCTCTCAGTTGAATGAATAGTG...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTTCTTTAACAACATTTaGTGCGGTCTTACTCTAGGC +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMFFNNI*CGLTLG
Trigger: GCCTAGAGTAAGACCGCATCAAATGTTGTTAAAGAA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCCCATGCGAGCGCACGTaGCTGCTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISPCERT*LLRLLL
Trigger: CAGCAGCAACCTGAGCAGGCACGTGCGCTCGCATGG...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGAGGTCTTCTCACAAGTaGCGCAGCGGTACCTGTACT +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLRSSHK*RSGTCT
Trigger: AGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCT...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATCTTGTCATCTGTCCTaGAGTTGTGGAACTCCAGCG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRSCHLS*SCGTPA
Trigger: CGCTGGAGTTCCACAACTGCAGGACAGATGACAAGA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR GCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTCCGTGCTTCTTCTTGTaGTTGGAGAGGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASPCFFL*LERLLL
Trigger: CAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGG...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000422911.6
CDS-3UTR GCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGTCGTGCACACGCATGTaGTCCTTCAGCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLSCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAGGAGCACATGCGTGTGCACGA...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATGTGTGCCGCTTGCAGTaGTTGAGCATGTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDVCRLQ*LSMLTF
Trigger: GAAGGTCAACATGCTCAAGCACTGCAAGCGGCACAC...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGCACCTCGGGGTGCTTaGGCCGCATGTGTCGGCTCA +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYAPRGA*AACVGS
Trigger: TGAGCCGACACATGCGGCGCAAGCACCCCGAGGTGC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATTGGCAGCTTTCCCGTaGTTCCCTTCGGCCAAATCC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRLAAFP*FPSAKS
Trigger: GGATTTGGCCGAAGGGAAGCACGGGAAAGCTGCCAA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCCGCCACGTGAGCGGGTaGTGGTCACTAAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTRHVSG*WSLSWL
Trigger: GAGCCAGCTTAGTGACCAGCACCCGCTCACGTGGCG...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACATCTGCTGCTGCTGCTaGTCCGCCTGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYICCCC*SACTWG
Trigger: GCCCCAGGTGCAGGCGGAGCAGCAGCAGCAGCAGAT...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGAAAATGTTCCCTGCTaGCTGCTGCCACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYENVPC*LLPPVN
Trigger: ATTCACAGGTGGCAGCAGGCAGCAGGGAACATTTTC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACTGGATATTACTAAGATaGGTTTTGAGCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHWILLR*VLSWSQ
Trigger: CTGACTCCAGCTCAAAACGCATCTTAGTAATATCCA...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTGGATATTACTAAGATaGGTTTTGAGCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMWILLR*VLSWSQ
Trigger: CTGACTCCAGCTCAAAACGCATCTTAGTAATATCCA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCAGCCGCGCGACCCTCTaGATCTGGGCAGCTGTGAAG +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTSRATL*IWAAVK
Trigger: CTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCT...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTTGCCCTTTAGATTCTaGAAAGGCAAAAAGAAATCG +
Preference number: 4 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFLPFRF*KGKKKS
Trigger: CGATTTCTTTTTGCCTTTGCAGAATCTAAAGGGCAA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAAGAGGTACAGGAGGTCTaGCTTCCACGCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKEVQEV*LPRRTL
Trigger: GAGGGTCCGGCGTGGAAGGCAGACCTCCTGTACCTC...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATTTGACCATGACCACTaGGCCCAGCTCGGGACATTC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRFDHDH*AQLGTF
Trigger: GAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGCTTGTCCATCTTCTTaGCATAGAAGGCCGCATACC +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRACPSS*HRRPHT
Trigger: GGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGCTTGTCCATCTTCTTaGCATAGAAGGCCGCATACC +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYACPSS*HRRPHT
Trigger: GGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCGAGGCTGCTCAGCTTTaGACACTTTGGGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLEAAQL*TLWVFS
Trigger: GGAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTC...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTAAACACATCTCACATTaGAACGTCTTGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCKHISH*NVLSSV
Trigger: GACAGATGACAAGACGTTCCAATGTGAGATGTGTTT...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTCCAGGTGCCGGCGCTaGTGGTCCAGCATGACGTCC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSSRCRR*WSSMTS
Trigger: GGACGTCATGCTGGACCACCAGCGCCGGCACCTGGA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGAAGTGGACATGGATGTaGTCCCTGAGCACATCCACG +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLKWTWM*SLSTST
Trigger: CGTGGATGTGCTCAGGGACCACATCCATGTCCACTT...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTAAGTGGACATGGATGTaGTCCCTGAGCACATCCACG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTKWTWM*SLSTST
Trigger: CGTGGATGTGCTCAGGGACCACATCCATGTCCACTT...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCTCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGGCGCAGCGCGTGCTTaGTCTTCATGCCTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRGAARA*SSCLSH
Trigger: GTGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATGTGTGGATGAGCTTGTaGGTCTCCATGGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDVWMSL*VSMVFL
Trigger: GAGGAACACCATGGAGACCCACAAGCTCATCCACAC...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACTCTTGTGACTTCGCTTaGCAGCTTTCCCGTGCTTCC +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHSCDFA*QLSRAS
Trigger: GGAAGCACGGGAAAGCTGCCAAGCGAAGTCACAAGA...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCTGAGCTCGATGGTGTaGTCACATTTGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLLSSMV*SHLGHP
Trigger: TGGGTGACCCAAATGTGACCACACCATCGAGCTCAG...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATGGGCCACAGACTGTaGGTTCGAGGCTTCCGGCTG +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANMGHRL*VRGFRL
Trigger: CAGCCGGAAGCCTCGAACCCACAGTCTGTGGCCCAT...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGGAGCACTTGTATCTaGAGAATGGAGACAATATCA +
Preference number: 4 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRWSTCI*RMETIS
Trigger: TGATATTGTCTCCATTCTCCAGATACAAGTGCTCCA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACCCTGTCCTGCAGTTGTaGAACTCCAGCGCGCTCTCG +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANPVLQL*NSSALS
Trigger: CGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGG...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422911.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGTCCGCTTGACGAGCTaGGTGATGGCGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSVRLTS*VMANTP
Trigger: GGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGAC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGTCCGCTTGACGAGCTaGGTGATGGCGAACACCCCC +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYVRLTS*VMANTP
Trigger: GGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGAC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTCCAGAACCAGCTCCATaGTCCGCTCATCTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISPEPAP*SAHLAL
Trigger: CAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGG...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGCTGGTGGTCCAGCATaGCGTCCTTGCGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRAGGPA*RPCGRT
Trigger: TGTTCTACCGCAAGGACGTCATGCTGGACCACCAGC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANLQLYL*GSESAL
Trigger: GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGGTTTTCACGGTGGATaGCCATGTGGGCGTGGTAGG +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRGFHGG*PCGRGR
Trigger: CCTACCACGCCCACATGGTCATCCACCGTGAAAACC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAGCCTGCTGCCACCTGTaGATACTGTCTGTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRACCHL*ILSVFS
Trigger: TGAGAACACAGACAGTATTCACAGGTGGCAGCAGGC...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAAGCCCTGGTCTCCTGCTaGTTCCATGGATGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKALVSC*FHGCLE
Trigger: CTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGC...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATAAACGAATTCTCCACTaGGATGGGTCCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDKRILH*DGSTEP
Trigger: AGGCTCTGTGGACCCATCTCAGTGGAGAATTCGTTT...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTATCCGCTCCGGAAACTaGGCAGCACCGGAAGCCGGG +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIIRSGN*AAPEAG
Trigger: CCCGGCTTCCGGTGCTGCGCAGTTTCCGGAGCGGAT...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACACCTTCAGGGGAAATaGAGACTCCTTTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRHLQGK*RLLFPF
Trigger: AAATGGGAAAAGGAGTCTGCATTTCCCCTGAAGGTG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTCGAAGCACACGGGGTaGCCGTCCTTCTGGAACACC +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISSKHTG*PSFWNT
Trigger: GGTGTTCCAGAAGGACGGGCACCCCGTGTGCTTCGA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGACCAGCATCATCCAGTTaGAGTCATCCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRPASSS*SHPRWR
Trigger: CCTCCAACGAGGATGACTGCAACTGGATGATGCTGG...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATCTTGCTGCAGATATTaGACTGGTAAACCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGSCCRY*TGKPAC
Trigger: ACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCAACTTCTTGTCGCCGTaGTTCTTCTTGTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLNFLSP*FFLCLE
Trigger: CTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTT...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAGGTAGAACATCTTGCTaGAGACCTCACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRGRTSC*RPHRQT
Trigger: AGTTTGCCTGTGAGGTCTGCAGCAAGATGTTCTACC...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACAGCGCCGGTTGCAGATaGTGCAGCCATAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANSAGCR*CSHSPS
Trigger: AGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCT...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAACCTTCTGCGCGAACCTaGGGTGGCACTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKPSART*GGTPCT
Trigger: AGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGG...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCCCTTCTGCGCGAACCTaGGGTGGCACTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISPSART*GGTPCT
Trigger: AGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGG...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGATCTTTAATCCCCGTGTaGCGCTTGCAGTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRSLIPV*RLQCLS
Trigger: GCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGA...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTATCTGCTGCTGCTGCTaGTCCGCCTGCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIICCCC*SACTWG
Trigger: GCCCCAGGTGCAGGCGGAGCAGCAGCAGCAGCAGAT...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTCCTGCCTTTGGAATGTaGAGAGCGGGATCGGATCCG +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISPAFGM*RAGSDP
Trigger: CGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGG...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAGCCATCTCTGACACCTaGCTTTGGAATGTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRAISDT*LWNVQS
Trigger: GCTCTGCACATTCCAAAGGCAGGTGTCAGAGATGGC...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCGGGATGACCTTGCCCTaGTTAACACAAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLGMTLP*LTQRSL
Trigger: AAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCC...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGTAAGGGGAGGCAGATaGGGCCCCGGCCCAGGACTT +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLVRGGR*GPGPGL
Trigger: AAGTCCTGGGCCGGGGCCGCATCTGCCTCCCCTTAC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGATGGATATTACTAAGATaGGTTTTGAGCTGGAGTCAG +
Preference number: 4 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRWILLR*VLSWSQ
Trigger: CTGACTCCAGCTCAAAACGCATCTTAGTAATATCCA...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGACTCTGCGAGGTCATTTaGCCTTTAGATTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGLCEVI*PLDSAK
Trigger: CTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAG...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTACTCTGCGAGGTCATTTaGCCTTTAGATTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALLCEVI*PLDSAK
Trigger: CTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAG...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCAGCTTTGGACACTTTaGGTTTTCTCCCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLQLWTL*VFSPFE
Trigger: CTCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTG...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTGGTGTCAGTGGTGGTaGTGGCCAGCTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANWCQWW*WPASPE
Trigger: TTCTGGGGAAGCTGGCCACCACCACCACTGACACCA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTCCGAGCTGGTGTCAGTaGTGGTGGTGGCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLPSWCQ*WWWPAS
Trigger: GGAAGCTGGCCACCACCACCACTGACACCAGCTCGG...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGCTTCTTCTTGTGCTTaGAGAGGTTGCTGTTGGTGG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTASSCA*RGCCWW
Trigger: CCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000422911.6
CDS-3UTR CCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTTCCAGGTGCCGGCGCTaGTGGTCCAGCATGACGTCC +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQISRCRR*WSSMTS
Trigger: GGACGTCATGCTGGACCACCAGCGCCGGCACCTGGA...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATCCAGGTGCCGGCGCTaGTGGTCCAGCATGACGTCC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSRCRR*WSSMTS
Trigger: GGACGTCATGCTGGACCACCAGCGCCGGCACCTGGA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTCCTTGAAGTGGACATaGATGTGGTCCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDSLKWT*MWSLST
Trigger: TGTGCTCAGGGACCACATCCATGTCCACTTCAAGGA...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTATTGGTCCCGCACAGCTaGCAGCTCTGCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLLVPHS*QLCAST
Trigger: GGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAA...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAAGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTC +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKVVSGR*SRSSIL
Trigger: GAGGATCGATGACCTGGACCACCTCCCGGAGACCAC...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACAGGCGTCGATGGTGGTaGTCTCCGGGAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYRRRWW*SPGGGP
Trigger: TGGACCACCTCCCGGAGACCACCACCATCGACGCCT...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACAGGAGGCGTCGATGGTaGTGGTCTCCGGGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYRRRRW*WSPGGG
Trigger: ACCACCTCCCGGAGACCACCACCATCGACGCCTCCT...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATCTGTACTGCGGAATTaGTCTCGTCGCCTACACTGC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRSVLRN*SRRLHC
Trigger: GCAGTGTAGGCGACGAGACCAATTCCGCAGTACAGA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGACTGAGCTCGATGGTGTaGTCACATTTGGGTCACCCA +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRLSSMV*SHLGHP
Trigger: TGGGTGACCCAAATGTGACCACACCATCGAGCTCAG...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCATCTGGACGTCATTTTaGCGGTTGTGCAACATGGCA +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLIWTSF*RLCNMA
Trigger: TGCCATGTTGCACAACCGCCAAAATGACGTCCAGAT...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATGCTGGCGGGGGATCTaGAGATACTCTGCAAAGCTA +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRCWRGI*RYSAKL
Trigger: TAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATGCTCAGCACGCCTCATaGTTTCAGCCCATAGTTGTA +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDAQHAS*FQPIVV
Trigger: TACAACTATGGGCTGAAACCATGAGGCGTGCTGAGC...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACAGTGAGTGCAGGATCTaGGATAACTGGCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHSECRI*DNWQSR
Trigger: CCTGCTTTGCCAGTTATCCCAGATCCTGCACTCACT...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCGATTCCATGGATGCCTaGAGCACTTGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRDSMDA*STCIWR
Trigger: TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATC...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGAGGACTCTTCTGCCTaGGTGGTACATGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTEDSSA*VVHGCC
Trigger: ACAACAACCATGTACCACCCAGGCAGAAGAGTCCTC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAGCCTGGTGGCCACAATaGCTGGATCTAATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRAWWPQ*LDLMSS
Trigger: GGAAGACATTAGATCCAGCCATTGTGGCCACCAGGC...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
3UTR CAA 72 bp GAATTGTCATCGTTTTCTTCCGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTCTGGTGGTCATCCATC +
Preference number: 4 (lower is better)
Translates to: ELSSFSSEEIPI*PINSSLWWSSI
Trigger: GATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACGGCTCTCTTTGCGGCTaGACAATTTTGCACACTCTT +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHGSLCG*TILHTL
Trigger: AAGAGTGTGCAAAATTGTTCAGCCGCAAAGAGAGCC...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGGTGTTCCTCTCGCTaGATGTCTTCCCACACAATT +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDWCSSR*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGCGAGAGGAACACCA...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACCCACCTTGTCGTGTGTaGGCTGAACGTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANPPCRV*AERASA
Trigger: TGCAGAAGCACGTTCAGCTCACACACGACAAGGTGG...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAATTGAGCTGGAGTCAGTaGCCTCACGTGACCCCTTGC +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKLSWSQ*PHVTPC
Trigger: GCAAGGGGTCACGTGAGGTCACTGACTCCAGCTCAA...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGATCATACAACCTGATGTaGCAGGAAATACAGCCAACA +
Preference number: 4 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRSYNLM*QEIQPT
Trigger: TGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGA...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCACGTCATCATACAACCTaGTGTGACAGGAAATACAGC +
Preference number: 4 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPRHHTT*CDRKYS
Trigger: GCTGTATTTCCTGTCACATCAGGTTGTATGATGACG...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCCACCTTCAGGGGAAATaGAGACTCCTTTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRHLQGK*RLLFPF
Trigger: AAATGGGAAAAGGAGTCTGCATTTCCCCTGAAGGTG...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACACCTTCAGGGGAAATaGAGACTCCTTTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRHLQGK*RLLFPF
Trigger: AAATGGGAAAAGGAGTCTGCATTTCCCCTGAAGGTG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACGCCAGAGCCGGCCTaGTTCAGCATGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLTPEPA*FSMGLS
Trigger: GGACAAGCCCATGCTGAAGCAGGCCGGCTCTGGCGT...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGACGATGACTAGAGGCTaGTCAGCTTTGGACACTTTG +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLTMTRG*SALDTL
Trigger: CAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGT...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACATGATCTCTGCCACTTaGTCTGTGGGTTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHMISAT*SVGSLS
Trigger: AGACAAGGAACCCACAGAGCAAGTGGCAGAGATCAT...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCATCTTGCTGCAGATATTaGACTGGTAAACCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPSCCRY*TGKPAC
Trigger: ACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGA...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACAACTTCTTGTCGCCGTaGTTCTTCTTGTGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHNFLSP*FFLCLE
Trigger: CTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTT...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATGCGGTAGAACATCTTaGTGCAGACCTCACAGGCAA +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRCGRTS*CRPHRQ
Trigger: TTGCCTGTGAGGTCTGCAGCAAGATGTTCTACCGCA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTGGTGGCGCAGCGCGTaGTTGGTCTTCATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISWWRSA*LVFMPF
Trigger: GAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTGGTGGCGCAGCGCGTaGTTGGTCTTCATGCCTTTC +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTWWRSA*LVFMPF
Trigger: GAAAGGCATGAAGACCAAGCACGCGCTGCGCCACCA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGCTCAGGCTGGACGATaGCAATGGAGGAGGCGTCGA +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSAQAGR*QWRRRR
Trigger: TCGACGCCTCCTCCATTGGCATCGTCCAGCCTGAGC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACTCCCTCTGCAGTTCTTaGCCCGAGTCTCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYSLCSS*PESPGT
Trigger: CGTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGA...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGAGGTACAGGAGGTCTaGCTTCCACGCCGGACCCTC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKEVQEV*LPRRTL
Trigger: GAGGGTCCGGCGTGGAAGGCAGACCTCCTGTACCTC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATGCAGTCATCCTCGTTaGAGGTGTCGAAGCACACGG +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRCSHPR*RCRSTR
Trigger: CCGTGTGCTTCGACACCTCCAACGAGGATGACTGCA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTTGGCTTGTTCTAAGTaGCCCAACAGATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWLACSK*PNRCSL
Trigger: CAATGAACATCTGTTGGGCCACTTAGAACAAGCCAA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGCTGCTGCCTCGCTTTaGCTGCCTGGAGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYAAASL*LPGGRL
Trigger: AAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACTCTTCTGTTCTTTGGTaGCAACATTCTCGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHSSVLW*QHSRSR
Trigger: CCGAGAGCGAGAATGTTGCCACCAAAGAACAGAAGA...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAATGGTGTCAGTGGTGGTaGTGGCCAGCTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKWCQWW*WPASPE
Trigger: TTCTGGGGAAGCTGGCCACCACCACCACTGACACCA...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGATGATGGGTGAACTTTaGAACCGAGCTGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLMMGEL*NRAGVS
Trigger: ACTGACACCAGCTCGGTTCCAAAGTTCACCCATCAT...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAAGGTGCCGGCGCTGGTaGTCCAGCATGACGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKRCRRW*SSMTSL
Trigger: CAAGGACGTCATGCTGGACCACCAGCGCCGGCACCT...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCG +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTINSSL*WSSINA
Trigger: CGCGTTGATGGATGACCACCAGAGGGAAGAGTTTAT...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTGCGCGAACCTGCGGTaGCACTCCTTGCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSCANLR*HSLHSY
Trigger: GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAGCTGGACGATGCCAATaGAGGAGGCGTCGATGGTGG +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEAGRCQ*RRRRWW
Trigger: CCACCATCGACGCCTCCTCCATTGGCATCGTCCAGC...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATGGTGTGGTCACATTTaGGTCACCCAGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRWCGHI*VTQGHH
Trigger: GTGGTGACCCTGGGTGACCCAAATGTGACCACACCA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAATTCGAGGCTTCCGGCTaGGGGTGGATCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEFEASG*GWIWTS
Trigger: TGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAA...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATCCAGTTTAAAACTCTaGCCTGCCAGAGGTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRSSLKL*PARGPF
Trigger: GAAGGGACCTCTGGCAGGCCAGAGTTTTAAACTGGA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAGTGTTTCCTCAAGATaGACTCCCAGTGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRSVSSR*TPSECR
Trigger: CCTGCACTCACTGGGAGTCCATCTTGAGGAAACACT...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCGAGCCCAAAGCCCGTTaGGAGTCTCTGCGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISEPKAR*ESLRGH
Trigger: ATGACCTCGCAGAGACTCCCAACGGGCTTTGGGCTC...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTGGGTCCACAGAGCCTaGTGGCCACAATGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTWVHRA*WPQWLD
Trigger: ATCCAGCCATTGTGGCCACCAGGCTCTGTGGACCCA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACAGTGATTTCAAAATGTaGTCCCTGGACCAGGAACCA +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYSDFKM*SLDQEP
Trigger: TGGTTCCTGGTCCAGGGACCACATTTTGAAATCACT...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR TCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAATGTCTCTGGAGGTGGTaGAGTACACGTCGCTGCCGT +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWECLWRW*STRRCR
Trigger: ACGGCAGCGACGTGTACTTCACCACCTCCAGAGACA...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACCAACAGATGTTCATTaGGGAGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRPTDVH*GAAAPG
Trigger: TCCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGG...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTGGTGGAGAAGAATCTaGAACACATCTCACATTGGA +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYWWRRI*NTSHIG
Trigger: TCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR TCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAGCTGGTGGTCCAGCATaGCGTCCTTGCGGTAGAACA +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEAGGPA*RPCGRT
Trigger: TGTTCTACCGCAAGGACGTCATGCTGGACCACCAGC...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTCTTGTCGCCGTGGGTaGGCAGGTGCTTGTTCATAT +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANSCRRG*AGACSY
Trigger: ATATGAACAAGCACCTGCTCACCCACGGCGACAAGA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGGTTCCCGATGCTGTTaGAGATCCGCCCGCAGATCT +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLGSRCC*RSARRS
Trigger: AGATCTGCGGGCGGATCTTCAACAGCATCGGGAACC...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGTCACCACTACCTGCTaGATGCTCTGTACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISVTTTC*MLCTAE
Trigger: TTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGAC...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTLLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATTTGGAGTGAAGTGCTaGGAAAGTTGCGTTTTGAAA +
Preference number: 4 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGFGVKC*ESCVLK
Trigger: TTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACATCATACAACCTGATGTaGCAGGAAATACAGCCAACA +
Preference number: 4 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTSYNLM*QEIQPT
Trigger: TGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGA...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATCACCTTCAGGGGAAATaGAGACTCCTTTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDHLQGK*RLLFPF
Trigger: AAATGGGAAAAGGAGTCTGCATTTCCCCTGAAGGTG...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCACCTTCAGGGGAAATaGAGACTCCTTTTCCCATTT +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLHLQGK*RLLFPF
Trigger: AAATGGGAAAAGGAGTCTGCATTTCCCCTGAAGGTG...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTGCCTCGCTTTGGCTaGCTGGAGGAAGGCTTTTGG +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYLPRFG*LEEGFW
Trigger: CCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAG...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTCTTGCTGCAGATATTaGACTGGTAAACCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDSCCRY*TGKPAC
Trigger: ACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGA...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATGTGCTTGGAGAGGTTaGTGTTGGTGGAGAAGAATC +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRCAWRG*CWWRRI
Trigger: GATTCTTCTCCACCAACAGCAACCTCTCCAAGCACA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000422911.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGTGCAAAGCGCCGGTTaGAGATGCTGCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYVQSAG*RCCSHS
Trigger: GCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCAC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGTGCAAAGCGCCGGTTaGAGATGCTGCAGCCATAGC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSVQSAG*RCCSHS
Trigger: GCTATGGCTGCAGCATCTGCAACCGGCGCTTTGCAC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTACCTTCTGCGCGAACCTaGGGTGGCACTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLPSART*GGTPCT
Trigger: AGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGG...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAACCTTCTGCGCGAACCTaGGGTGGCACTCCTTGCACT +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKPSART*GGTPCT
Trigger: AGTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGG...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACAGCATGTTGACCTTCTaGGCGAACCTGCGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYSMLTF*ANLRWH
Trigger: GTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCT...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTACGGAGCACGTCCACTaGTTGCCCACTGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLTEHVH*LPTVWM
Trigger: CATCCACACAGTGGGCAAGCAGTGGACGTGCTCCGT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTCACAGCTGGCAGCTCTaGGCCTCCACCTTGTCGTGT +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIHSWQL*ASTLSC
Trigger: ACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTG...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTTCGGCCAAATCCTCCTaGTCCAGAGTCAGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLSAKSS*SRVSSG
Trigger: GCCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGA...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATAATCATCCTTTGTTCTaGTGGCAACATCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDNHPLF*WQHQDC
Trigger: GCAGTCCTGATGTTGCCAGCAGAACAAAGGATGATT...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACACAGACCCTCCTGCATaGTGCCTGGGGATGAACATT +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANTDPPA*CLGMNI
Trigger: AATGTTCATCCCCAGGCAGCATGCAGGAGGGTCTGT...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTACCCCACAGACCCTCCTaGATGCTGCCTGGGGATGAA +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLPHRPS*MLPGDE
Trigger: TTCATCCCCAGGCAGCATGCAGGAGGGTCTGTGGGG...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTCCCGTTGGGAGTCTCTaGGAGGTCATTTGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISPVGSL*EVICPL
Trigger: TAAAGGGCAAATGACCTCGCAGAGACTCCCAACGGG...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTTTGACCATGACCACTaGGCCCAGCTCGGGACATTC +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTFDHDH*AQLGTF
Trigger: GAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCCTCGCTTTGGCTGCCTaGAGGAAGGCTTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISLALAA*RKAFGL
Trigger: CAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAG...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGCTGCTGCCTCGCTTTaGCTGCCTGGAGGAAGGCTT +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLAAASL*LPGGRL
Trigger: AAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAATGGTGTCAGTGGTGGTaGTGGCCAGCTTCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEWCQWW*WPASPE
Trigger: TTCTGGGGAAGCTGGCCACCACCACCACTGACACCA...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAAAACACATCTCACATTaGAACGTCTTGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALKHISH*NVLSSV
Trigger: GACAGATGACAAGACGTTCCAATGTGAGATGTGTTT...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTAAGTGGACATGGATGTaGTCCCTGAGCACATCCACG +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISKWTWM*SLSTST
Trigger: CGTGGATGTGCTCAGGGACCACATCCATGTCCACTT...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATGCGCGAACCTGCGGTaGCACTCCTTGCACTCGTAC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKCANLR*HSLHSY
Trigger: GTACGAGTGCAAGGAGTGCCACCGCAGGTTCGCGCA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTATTCGAGGCTTCCGGCTaGGGGTGGATCTGGACGTCA +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLFEASG*GWIWTS
Trigger: TGACGTCCAGATCCACCCCCAGCCGGAAGCCTCGAA...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAGTGTCGGGCGAACACTaGTTCTGTAAGGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEVSGEH*FCKGRQ
Trigger: CTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAACTCGGGATTCTGGCTaGGCTTCAGCCAGAATGGAT +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRTRDSG*ASARMD
Trigger: ATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAACCGCACACGCAGACCTaGCTGTTCACCGCACATTCA +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEPHTQT*LFTAHS
Trigger: TGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGG...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATTTGTCCTCTCACTGTaGCCACAAACAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRFVLSL*PQTEYQ
Trigger: CTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTCTTGTATCTGGAGAATaGAGACAATATCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASLVSGE*RQYHPK
Trigger: CTTGGGGTGATATTGTCTCCATTCTCCAGATACAAG...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGACTTGTATCTGGAGAATaGAGACAATATCACCCCAAG +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRLVSGE*RQYHPK
Trigger: CTTGGGGTGATATTGTCTCCATTCTCCAGATACAAG...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTGGAGCACTTGTATCTaGAGAATGGAGACAATATCA +
Preference number: 4 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWWSTCI*RMETIS
Trigger: TGATATTGTCTCCATTCTCCAGATACAAGTGCTCCA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCACTCTTCTGCCTGGGTaGTACATGGTTGTTGTATTT +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRTLLPG*YMVVVF
Trigger: AAATACAACAACCATGTACCACCCAGGCAGAAGAGT...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTACTCTTCTGCCTGGGTaGTACATGGTTGTTGTATTT +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASTLLPG*YMVVVF
Trigger: AAATACAACAACCATGTACCACCCAGGCAGAAGAGT...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACACTCTTCTGCCTGGGTaGTACATGGTTGTTGTATTT +
Preference number: 4 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYTLLPG*YMVVVF
Trigger: AAATACAACAACCATGTACCACCCAGGCAGAAGAGT...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAAATTCTCCACTGAGATaGGTCCACAGAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRNSPLR*VHRAWW
Trigger: CCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATT...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGAGCAGCTGTACCTGTaGCCTCCCCGCAAGACTCAC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKEQLYL*PPRKTH
Trigger: GTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGCTC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACCTTTCACAATCCAATaGGAAAGCCCAAGACGCCGC +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRPFTIQ*ESPRRR
Trigger: GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGG...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAAAACACATCTCACATTaGAACGTCTTGTCATCTGGT +
Preference number: 4 (lower is better)
Translates to: LPAATCEYCLCSHRNRALKHISH*NVLSSG
Trigger: ACCAGATGACAAGACGTTCCAATGTGAGATGTGTTT...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422911.6
CDS-3UTR TCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTCATCTTCCAGTCGTCTaGTCTCCAAGTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISHLPVV*SPSWEE
Trigger: TTCCTCCCAACTTGGAGATCAGACGACTGGAAGATG...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATTGCAGCTGTACTTGTaGGGCTCCGAGTCTGCGCTC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKLQLYL*GSESAL
Trigger: GAGCGCAGACTCGGAGCCTCACAAGTACAGCTGCAA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCCACCTTGTCGTGTGTaGGCTGAACGTGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYPPCRV*AERASA
Trigger: TGCAGAAGCACGTTCAGCTCACACACGACAAGGTGG...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATCTCTGAGTATTCGCTaGAGGTGGCGTCCTCGGGCA +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSLSIR*RWRPRA
Trigger: TGCCCGAGGACGCCACCTTCAGCGAATACTCAGAGA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTCGCCTACACTGCCTGTaGACTCCGTCTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLRLHCL*TPSLSL
Trigger: CAGAGAAAGAGACGGAGTTCACAGGCAGTGTAGGCG...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTCTAGTGGGGAAGCCATaGGCCTTCCGCCTTTGGATG +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQILVGKP*AFRLWM
Trigger: CATCCAAAGGCGGAAGGCTCATGGCTTCCCCACTAG...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACCTCGGTAATGATCTCTaGCACTTGCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANLGNDL*HLLCGF
Trigger: GAACCCACAGAGCAAGTGGCAGAGATCATTACCGAG...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCGCCGGATGCCGTGTCTaGTTGAGAGAATTAAGCTCC +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTAGCRV*LRELSS
Trigger: GGAGCTTAATTCTCTCAAGCAGACACGGCATCCGGC...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCGCCGGATGCCGTGTCTaGTTGAGAGAATTAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISAGCRV*LRELSS
Trigger: GGAGCTTAATTCTCTCAAGCAGACACGGCATCCGGC...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATCTTGCTGCAGATATTaGACTGGTAAACCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRSCCRY*TGKPAC
Trigger: ACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp GAATTGTCATCGTTTTCTTCCGAGGAGATCCCGATCTTGCCGATAAACTCTTCCTCTTGCTGCAGATATTaGACTGGTAAACCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: ELSSFSSEEIPILPINSSSCCRY*TGKPAC
Trigger: ACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGA...GGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGATCTGGAAGATCTTGCTaGAGATATTGCACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: TRDSGWASARMDTFGLQRSGRSC*RYCTGK
Trigger: TTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGA...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAAGCGCCGGTTGCAGATaGTGCAGCCATAGCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSAGCR*CSHSPS
Trigger: AGAAGGGCTATGGCTGCAGCATCTGCAACCGGCGCT...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTCTTTAATCCCCGTGTaGCGCTTGCAGTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTSLIPV*RLQCLS
Trigger: GCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTCTTTAATCCCCGTGTaGCGCTTGCAGTGCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISSLIPV*RLQCLS
Trigger: GCTCAAGCACTGCAAGCGGCACACGGGGATTAAAGA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACCACTACCTGCTGAATaGTCTGTACTGCGGAATTGG +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRPLPAE*SVLRNW
Trigger: CCAATTCCGCAGTACAGAGCATTCAGCAGGTAGTGG...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGGAGAAAATGTTCCCTaGTGCCTGCTGCCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSGENVP*CLLPPV
Trigger: CACAGGTGGCAGCAGGCAGCAGGGAACATTTTCTCC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGACCCTCCTGCATGCTaGCTGGGGATGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYDPPAC*LGMNIP
Trigger: AGGAATGTTCATCCCCAGGCAGCATGCAGGAGGGTC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTCGGCCTGCTTCAGCATaGGCTTGTCCATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSRPASA*ACPSSW
Trigger: CCAAGAAGATGGACAAGCCCATGCTGAAGCAGGCCG...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTTTTCTTCTGTTCTTTaGTGGCAACATTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASFSSVL*WQHSRS
Trigger: AGAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTTTTCTTCTGTTCTTTaGTGGCAACATTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLFSSVL*WQHSRS
Trigger: AGAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTCATGATCCGCTCATCTaGCGTTGCACTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSHDPLI*RCTHRL
Trigger: GAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATG...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAGACCGTAATGGTTGCTaGCGGGGGATCTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEDRNGC*RGIWRY
Trigger: GTATCTCCAGATCCCCCGCCAGCAACCATTACGGTC...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCCAGAATGGATACATTTaGATTGCAGAGAATCCTGAG +
Preference number: 4 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRQNGYI*IAENPE
Trigger: CTCAGGATTCTCTGCAATCCAAATGTATCCATTCTG...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGAGCCCAAAGCCCGTTaGGAGTCTCTGCGAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIEPKAR*ESLRGH
Trigger: ATGACCTCGCAGAGACTCCCAACGGGCTTTGGGCTC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACTGCCTGGGTGGTACATaGTTGTTGTATTTTGCTATC +
Preference number: 4 (lower is better)
Translates to: TVATNRVPGKLRANFSPHCLGGT*LLYFAI
Trigger: GATAGCAAAATACAACAACCATGTACCACCCAGGCA...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCCATCTTCCAGTCGTCTaGTCTCCAAGTTGGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTHLPVV*SPSWEE
Trigger: TTCCTCCCAACTTGGAGATCAGACGACTGGAAGATG...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATGGTGGAGAAGAATCTaGAACACATCTCACATTGGA +
Preference number: 4 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRWWRRI*NTSHIG
Trigger: TCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000422911.6
CDS-3UTR TCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTACGCCTACACTGCCTGTaGACTCCGTCTCTTTCTCTG +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLRLHCL*TPSLSL
Trigger: CAGAGAAAGAGACGGAGTTCACAGGCAGTGTAGGCG...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGTCACCACTACCTGCTaGATGCTCTGTACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSVTTTC*MLCTAE
Trigger: TTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGAC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGTCAGTGACCTCACGTaGCCCCTTGCACATGATGAC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKVSDLT*PLAHDD
Trigger: GTCATCATGTGCAAGGGGTCACGTGAGGTCACTGAC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGTTCTTTAACAACATTTaGTGCGGTCTTACTCTAGGC +
Preference number: 4 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLFFNNI*CGLTLG
Trigger: GCCTAGAGTAAGACCGCATCAAATGTTGTTAAAGAA...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTCCAGCATCATCCAGTTaGAGTCATCCTCGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLPASSS*SHPRWR
Trigger: CCTCCAACGAGGATGACTGCAACTGGATGATGCTGG...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAACGATGACTAGAGGCTaGTCAGCTTTGGACACTTTG +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRTMTRG*SALDTL
Trigger: CAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGT...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACGGTAGAACATCTTGCTaGAGACCTCACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANGRTSC*RPHRQT
Trigger: AGTTTGCCTGTGAGGTCTGCAGCAAGATGTTCTACC...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATCGCGGACATTGTCGTaGACACGCATGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSRTLS*TRMCSF
Trigger: GAAGGAGCACATGCGTGTGCACGACAATGTCCGCGA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGTGTGCCGCTTGCAGTaGTTGAGCATGTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLVCRLQ*LSMLTF
Trigger: GAAGGTCAACATGCTCAAGCACTGCAAGCGGCACAC...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCCCACTACCTGCTGAATaGTCTGTACTGCGGAATTGG +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTPLPAE*SVLRNW
Trigger: CCAATTCCGCAGTACAGAGCATTCAGCAGGTAGTGG...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCGAAAATGTTCCCTGCTaGCTGCTGCCACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISENVPC*LLPPVN
Trigger: ATTCACAGGTGGCAGCAGGCAGCAGGGAACATTTTC...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGACCCTCCTGCATGCTaGCTGGGGATGAACATTCCT +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIDPPAC*LGMNIP
Trigger: AGGAATGTTCATCCCCAGGCAGCATGCAGGAGGGTC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATCGGAGTCGTGGTACTaGCTGCAGTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSESWY*LQSSHQ
Trigger: CTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGGACATTCGGAGTCGTaGTACTGGCTGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLGHSES*YWLQSS
Trigger: TGAAGACTGCAGCCAGTACCACGACTCCGAATGTCC...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGCAGCTCCAGGAAGGTaGCAGAACACACTTTACACG +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYAAPGR*QNTLYT
Trigger: CGTGTAAAGTGTGTTCTGCCACCTTCCTGGAGCTGC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAACTCGCTTTGGCTGCCTaGAGGAAGGCTTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKLALAA*RKAFGL
Trigger: CAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAG...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAACTGCCACTTGCTCTGTaGGTTCCTTGTCTTCCACGA +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWELPLAL*VPCLPR
Trigger: TCGTGGAAGACAAGGAACCCACAGAGCAAGTGGCAG...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTTGTACTTCTGCACGTTaGGGTCCGGCAGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLCTSAR*GPAGFH
Trigger: GTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACA...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAACAGATCTCGCAGGGGTaGATGTACTTCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEQISQG*MYFCTL
Trigger: CAACGTGCAGAAGTACATCCACCCCTGCGAGATCTG...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTAGAGTCAGCTCAGGCTaGACGATGCCAATGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIRVSSG*TMPMEE
Trigger: CTCCTCCATTGGCATCGTCCAGCCTGAGCTGACTCT...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTTGGTGTGGTCACATTTaGGTCACCCAGGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIWCGHI*VTQGHH
Trigger: GTGGTGACCCTGGGTGACCCAAATGTGACCACACCA...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAAGCTCAGCACGCCTCATaGTTTCAGCCCATAGTTGTA +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKAQHAS*FQPIVV
Trigger: TACAACTATGGGCTGAAACCATGAGGCGTGCTGAGC...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGATTCCATGGATGCCTaGAGCACTTGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRDSMDA*STCIWR
Trigger: TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCCTCCTGCTGATTCCATaGATGCCTGGAGCACTTGTA +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISLLLIP*MPGALV
Trigger: TACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAG...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGCCTGGTGGCCACAATaGCTGGATCTAATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSAWWPQ*LDLMSS
Trigger: GGAAGACATTAGATCCAGCCATTGTGGCCACCAGGC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTCCGGATGCCGTGTTTTaGAACCGAGCTGGTGTCAGT +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIPDAVF*NRAGVS
Trigger: ACTGACACCAGCTCGGTTCCAAAACACGGCATCCGG...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS-3UTR TCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTACCAACAGATGTTCATTaGGGAGCTGCAGCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLPTDVH*GAAAPG
Trigger: TCCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGG...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTCCTTGTCTTCCACGATaGCTAGAGGCTGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIPCLPR*LEAAQL
Trigger: AAGCTGAGCAGCCTCTAGTCATCGTGGAAGACAAGG...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTATTGTCGTGTGTGAGCTaGACGTGCTTCTGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLLSCVS*TCFCSM
Trigger: CATGCTGCAGAAGCACGTTCAGCTCACACACGACAA...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGTCACCACTACCTGCTaGATGCTCTGTACTGCGGAA +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLVTTTC*MLCTAE
Trigger: TTCCGCAGTACAGAGCATTCAGCAGGTAGTGGTGAC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTAAACGAATTCTCCACTaGGATGGGTCCACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLKRILH*DGSTEP
Trigger: AGGCTCTGTGGACCCATCTCAGTGGAGAATTCGTTT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAACTCGGTAATGATCTCTaGCACTTGCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWELGNDL*HLLCGF
Trigger: GAACCCACAGAGCAAGTGGCAGAGATCATTACCGAG...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTCTCGGTAATGATCTCTaGCACTTGCTCTGTGGGTTC +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLLGNDL*HLLCGF
Trigger: GAACCCACAGAGCAAGTGGCAGAGATCATTACCGAG...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGATCTGGAAGATCTTGCTaGAGATATTGCACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRSGRSC*RYCTGK
Trigger: TTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGA...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTACGTGCCTGCTCAGGTTaGTGCTGTTCTGGAAGATCT +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLRACSG*CCSGRS
Trigger: AGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACG...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGGTGCTTGTTCATATTaGTCCGGCAGGAGAACACCT +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYGACSY*SGRRTP
Trigger: AGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGGTGCTTGTTCATATTaGTCCGGCAGGAGAACACCT +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSGACSY*SGRRTP
Trigger: AGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGTGTGCCGCTTGCAGTaGTTGAGCATGTTGACCTTC +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIVCRLQ*LSMLTF
Trigger: GAAGGTCAACATGCTCAAGCACTGCAAGCGGCACAC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAATTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTTTAAAACTCTGGCCTaGCAGAGGTCCCTTCTAGAG +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISFKTLA*QRSLLE
Trigger: CTCTAGAAGGGACCTCTGGCAGGCCAGAGTTTTAAA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTCTCTGCGAGGTCATTTaGCCTTTAGATTCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: TWLFTAHSVLGAINASISLCEVI*PLDSAK
Trigger: CTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAG...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGGACATTCGGAGTCGTaGTACTGGCTGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIGHSES*YWLQSS
Trigger: TGAAGACTGCAGCCAGTACCACGACTCCGAATGTCC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTGCTTGTCCATCTTCTTaGCATAGAAGGCCGCATACC +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSACPSS*HRRPHT
Trigger: GGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGC...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GAATTGTCATCGTTTTCTTCCGAGGAGATCCCGATCTTGCCGATAAACTCTTCCTTTTCTTCTGTTCTTTaGTGGCAACATTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: ELSSFSSEEIPILPINSSFSSVL*WQHSRS
Trigger: AGAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAA...GGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCG +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISINSSL*WSSINA
Trigger: CGCGTTGATGGATGACCACCAGAGGGAAGAGTTTAT...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATGTACTTCTGCACGTTaGGGTCCGGCAGGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKCTSAR*GPAGFH
Trigger: GTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAACAGATCTCGCAGGGGTaGATGTACTTCTGCACGTTG +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKQISQG*MYFCTL
Trigger: CAACGTGCAGAAGTACATCCACCCCTGCGAGATCTG...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGTGTGGATGAGCTTGTaGGTCTCCATGGTGTTCCTC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKVWMSL*VSMVFL
Trigger: GAGGAACACCATGGAGACCCACAAGCTCATCCACAC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATCTGTACTGCGGAATTaGTCTCGTCGCCTACACTGC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSVLRN*SRRLHC
Trigger: GCAGTGTAGGCGACGAGACCAATTCCGCAGTACAGA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAATTTGTCCTCTCACTGTaGCCACAAACAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKFVLSL*PQTEYQ
Trigger: CTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAA...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTAGTGTTTCCTCAAGATaGACTCCCAGTGAGTGCAGG +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLSVSSR*TPSECR
Trigger: CCTGCACTCACTGGGAGTCCATCTTGAGGAAACACT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGAGGACTCTTCTGCCTaGGTGGTACATGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYEDSSA*VVHGCC
Trigger: ACAACAACCATGTACCACCCAGGCAGAAGAGTCCTC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGCCTGGTGGCCACAATaGCTGGATCTAATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKAWWPQ*LDLMSS
Trigger: GGAAGACATTAGATCCAGCCATTGTGGCCACCAGGC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAAATTCTCCACTGAGATaGGTCCACAGAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKNSPLR*VHRAWW
Trigger: CCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATT...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAAATTCTCCACTGAGATaGGTCCACAGAGCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLNSPLR*VHRAWW
Trigger: CCACCAGGCTCTGTGGACCCATCTCAGTGGAGAATT...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCTTCTTCTTGTGCTTaGAGAGGTTGCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLASSCA*RGCCPA
Trigger: TGCAGGACAGCAACCTCTCCAAGCACAAGAAGAAGC...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS-3UTR TCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTTGGTGTTCCTCTCGCTaGATGTCTTCCCACACAATT +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLWCSSR*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGCGAGAGGAACACCA...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAGTCTGCTGTTTGGAGTaGAGTGCTGAGAAAGTTGCG +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLVCCLE*SAEKVA
Trigger: CGCAACTTTCTCAGCACTTCACTCCAAACAGCAGAC...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGGGATGACCTTGCCCTaGTTAACACAAAGGAGTCTT +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYGMTLP*LTQRSL
Trigger: AAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGAAAATGTTCCCTGCTaGCTGCTGCCACCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIENVPC*LLPPVN
Trigger: ATTCACAGGTGGCAGCAGGCAGCAGGGAACATTTTC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAACAGCTTTGGACACTTTaGGTTTTCTCCCCCTTCGAG +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKQLWTL*VFSPFE
Trigger: CTCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTG...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACATCTGGACGTCATTTTaGCGGTTGTGCAACATGGCA +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYIWTSF*RLCNMA
Trigger: TGCCATGTTGCACAACCGCCAAAATGACGTCCAGAT...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTTTTGTCCTCTCACTGTaGCCACAAACAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLFVLSL*PQTEYQ
Trigger: CTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAA...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGATTCCATGGATGCCTaGAGCACTTGTATCTGGAGA +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYDSMDA*STCIWR
Trigger: TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGAGGACTCTTCTGCCTaGGTGGTACATGGTTGTTGT +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKEDSSA*VVHGCC
Trigger: ACAACAACCATGTACCACCCAGGCAGAAGAGTCCTC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAACTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWELLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTACGATGACTAGAGGCTaGTCAGCTTTGGACACTTTG +
Preference number: 4 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQITMTRG*SALDTL
Trigger: CAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGT...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTTGGCTTGTTCTAAGTaGCCCAACAGATGTTCATTG +
Preference number: 4 (lower is better)
Translates to: LLFVIIQPDVTGNTANISLACSK*PNRCSL
Trigger: CAATGAACATCTGTTGGGCCACTTAGAACAAGCCAA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACGGGCTTCAGCCAGAATaGATACATTTGGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYGLQPE*IHLDCR
Trigger: TCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCC...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAACTTCTAGAGTTAAGCTaGCAGACCGTAATGGTTGCT +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKLLELS*QTVMVA
Trigger: AGCAACCATTACGGTCTGTCAGCTTAACTCTAGAAG...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR TCA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTTCATACAACCTGATGTaGCAGGAAATACAGCCAACA +
Preference number: 4 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLSYNLM*QEIQPT
Trigger: TGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGA...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAAATCATCCTTTGTTCTaGTGGCAACATCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLNHPLF*WQHQDC
Trigger: GCAGTCCTGATGTTGCCAGCAGAACAAAGGATGATT...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTGGAGCACTTGTATCTaGAGAATGGAGACAATATCA +
Preference number: 4 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTWSTCI*RMETIS
Trigger: TGATATTGTCTCCATTCTCCAGATACAAGTGCTCCA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR TCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACTTCTTTAACAACATTTaGTGCGGTCTTACTCTAGGC +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYFFNNI*CGLTLG
Trigger: GCCTAGAGTAAGACCGCATCAAATGTTGTTAAAGAA...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTCTGGAAGATCTTGCTaGAGATATTGCACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSSGRSC*RYCTGK
Trigger: TTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTTTTCTTCTGTTCTTTaGTGGCAACATTCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSFSSVL*WQHSRS
Trigger: AGAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CCA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTGGAGCACTTGTATCTaGAGAATGGAGACAATATCA +
Preference number: 4 (lower is better)
Translates to: TAHSVLGAINASISELTSWSTCI*RMETIS
Trigger: TGATATTGTCTCCATTCTCCAGATACAAGTGCTCCA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR GCA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAATCTGGAAGATCTTGCTaGAGATATTGCACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSGRSC*RYCTGK
Trigger: TTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGA...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR GCA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACTTGCCCTTTAGATTCTaGAAAGGCAAAAAGAAATCG +
Preference number: 4 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYLPFRF*KGKKKS
Trigger: CGATTTCTTTTTGCCTTTGCAGAATCTAAAGGGCAA...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS GCA 90 bp GGCATGGCGGCTGGACCGGGGCGGCGCGCGGCTGCCTTTGGAATGTaGAGAGCGGGATCGGATCCGGACTCCGGGTTGCGATCCGCTCCG +
Preference number: 5 (lower is better)
Translates to: GMAAGPGRRAAAFGM*RAGSDPDSGLRSAP
Trigger: CGGAGCGGATCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 90 bp GGCAGAGGAGGCTGGCACGCCCGGCCAACCCAAAGCAGACCCGTGTaGCAACCCGCGCCACTCTGGGGAGCAGGGGAGGAAGGTAGGCAG +
Preference number: 5 (lower is better)
Translates to: GRGGWHARPTQSRPV*QPAPLWGAGEEGRQ
Trigger: CTGCCTACCTTCCTCCCCTGCTCCCCAGAGTGGCGCGGGTTGCCACACGGGTCTGCTTTGGGTTGGCCGGGCGTGCCAGCCTCCTCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGGCCCTGGTGGACACCTaGGTCCCGCACAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARALVDT*VPHSWQ
Trigger: CTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGC...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 90 bp GGAACGGCAGGGCAGCTGCTGCCCACTGAGCCGCCTCACCAGGCCTaGAGGGACTGCTTCTGGAAGCTGCTGTGGGTCAGCCCTGTCCCT +
Preference number: 5 (lower is better)
Translates to: GTAGQLLPTEPPHQA*RDCFWKLLWVSPVP
Trigger: AGGGACAGGGCTGACCCACAGCAGCTTCCAGAAGCAGTCCCTGCAGGCCTGGTGAGGCGGCTCAGTGGGCAGCAGCTGCCCTGCCGTTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS-3UTR CAA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGTCCGCTCATCTGGCGTaGCACTCACAGGCTCATCCG +
Preference number: 5 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRSAHLA*HSQAHP
Trigger: CGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGA...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGTCCACGCGGAAGAACTaGCGCCCGCAGATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARSTRKN*RPQISQ
Trigger: CTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGGA...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGAGTCCTGTCCTGCAGTaGTGGAACTCCAGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRSPVLQ*WNSSAL
Trigger: GAGCGCGCTGGAGTTCCACAACTGCAGGACAGGACT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422911.6
ENST00000449395.6
CDS GCA 90 bp ACAAAGAACAGTCGGCATGGCGGCTGGACCGGGGCGGCGCGCGGCTaGCTTTGGAATGTGCAGAGCGGGATCGGATCCGGACTCCGGGTT +
Preference number: 5 (lower is better)
Translates to: TKNSRHGGWTGAARG*LWNVQSGIGSGLRV
Trigger: AACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCCGACTGTTCTTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS-3UTR CAA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCCGGCAGGAGAACACCTaGCCACACACCGGGCACCCG +
Preference number: 5 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGARQENT*PHTGHP
Trigger: CGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCCG...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCGCCCTGGTGGACACCTaGGTCCCGCACAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVALVDT*VPHSWQ
Trigger: CTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGC...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGCCCTGGTGGACACCTaGGTCCCGCACAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAALVDT*VPHSWQ
Trigger: CTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GGAGGCCCTGGTGGACACCTTGGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: GGPGGHLGPAQLAALRLHIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...GTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGCCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS TCA 90 bp GCGCAGGGCGATCCCGGAGCGGCTCCGGGAAATCCAGCCGGGTTTTaGCTCCGATCGCCAACGGTGCCCGCAGCCGGCGAATGTAACAAA +
Preference number: 5 (lower is better)
Translates to: AQGDPGAAPGNPAGF*LRSPTVPAAGECNK
Trigger: TTTGTTACATTCGCCGGCTGCGGGCACCGTTGGCGATCGGAGTCAAAACCCGGCTGGATTTCCCGGAGCCGCTCCGGGATCGCCCTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 90 bp GGGCAGCTGCTGCCCACTGAGCCGCCTCACCAGGCCTGCAGGGACTaGTTCTGGAAGCTGCTGTGGGTCAGCCCTGTCCCTGTCCTCATA +
Preference number: 5 (lower is better)
Translates to: GQLLPTEPPHQACRD*FWKLLWVSPVPVLI
Trigger: TATGAGGACAGGGACAGGGCTGACCCACAGCAGCTTCCAGAAGCAGTCCCTGCAGGCCTGGTGAGGCGGCTCAGTGGGCAGCAGCTGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 90 bp TCTGGTGCTCGGCCTCCGCCGCTGGCCGCACCAGCATCATCCAGTTaGAGTCATCCTCGTTGGAGGTGTCGAAGCACACGGGGTGCCCGT +
Preference number: 5 (lower is better)
Translates to: SGARPPPLAAPASSS*SHPRWRCRSTRGAR
Trigger: ACGGGCACCCCGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGAGCACCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 90 bp AGGTTAGTCGGTCACGTCAGGCAGCGGCCAGGGCAGCCCCAGCACTaGCCTGGACACACTCTCCAATCAGTGGGGACGCTTGTGGGCCAC +
Preference number: 5 (lower is better)
Translates to: RLVGHVRQRPGQPQH*PGHTLQSVGTLVGH
Trigger: GTGGCCCACAAGCGTCCCCACTGATTGGAGAGTGTGTCCAGGGCAGTGCTGGGGCTGCCCTGGCCGCTGCCTGACGTGACCGACTAACCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465955.1
CDS CCA 90 bp CTGCTGCCCACTGAGCCGCCTCACCAGGCCTGCAGGGACTGCTTCTaGAAGCTGCTGTGGGTCAGCCCTGTCCCTGTCCTCATAACCCCG +
Preference number: 5 (lower is better)
Translates to: LLPTEPPHQACRDCF*KLLWVSPVPVLITP
Trigger: CGGGGTTATGAGGACAGGGACAGGGCTGACCCACAGCAGCTTCCAGAAGCAGTCCCTGCAGGCCTGGTGAGGCGGCTCAGTGGGCAGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 90 bp GCCGTGCTGGTAGGCCGTCAGGTTCTGGTGCTCGGCCTCCGCCGCTaGCCGCACCAGCATCATCCAGTTGCAGTCATCCTCGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: AVLVGRQVLVLGLRR*PHQHHPVAVILVGG
Trigger: ACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGAGCACCAGAACCTGACGGCCTACCAGCACGGC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAGATCCGGACTCCGGGTaGCGATCCGCTCCGGAAACT +
Preference number: 5 (lower is better)
Translates to: THSRATLCIWAAVKGGQGDPDSG*RSAPET
Trigger: AGTTTCCGGAGCGGATCGCAACCCGGAGTCCGGATC...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGAACACAAAGGAGTCTTaGACCATGACCACTGGGCCC +
Preference number: 5 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRNTKES*TMTTGP
Trigger: GGGCCCAGTGGTCATGGTCAAAGACTCCTTTGTGTT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGACTGTGTGGATGAGCTaGTGGGTCTCCATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRTVWMS*WVSMVF
Trigger: GAACACCATGGAGACCCACAAGCTCATCCACACAGT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAGCACCTCGGGGTGCTaGCGCCGCATGTGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPSTSGC*RRMCRL
Trigger: GAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGATGGTGTGGTCACATTaGGGTCACCCAGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARMVWSH*GHPGSP
Trigger: TGGTGACCCTGGGTGACCCAAATGTGACCACACCAT...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGACCAGGGTCGTCAGGTaGATGAAATGGGCCACAGAC +
Preference number: 5 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARTRVVR*MKWATD
Trigger: GTCTGTGGCCCATTTCATCAACCTGACGACCCTGGT...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: PPAQSHAGHSEAALGTERIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 90 bp CGGCTCCGGGAAATCCAGCCGGGTTTTGACTCCGATCGCCAACGGTaGCCGCAGCCGGCGAATGTAACAAAGAACAGTCGGCATGGCGGC +
Preference number: 5 (lower is better)
Translates to: RLREIQPGFDSDRQR*PQPANVTKNSRHGG
Trigger: GCCGCCATGCCGACTGTTCTTTGTTACATTCGCCGGCTGCGGGCACCGTTGGCGATCGGAGTCAAAACCCGGCTGGATTTCCCGGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 90 bp CCGCCGCTGGCCGCACCAGCATCATCCAGTTGCAGTCATCCTCGTTaGAGGTGTCGAAGCACACGGGGTGCCCGTCCTTCTGGAACACCT +
Preference number: 5 (lower is better)
Translates to: PPLAAPASSSCSHPR*RCRSTRGARPSGTP
Trigger: AGGTGTTCCAGAAGGACGGGCACCCCGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CCA 90 bp CTGGGGTGCCTGCAGCGTGGACGCCAGAGCCGGCCTGCTTCAGCATaGGCTTGTCCATCTTCTTGGCATAGAAGGCCGCATACCACACGC +
Preference number: 5 (lower is better)
Translates to: LGCLQRGRQSRPASA*ACPSSWHRRPHTTR
Trigger: GCGTGTGGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGCCCATGCTGAAGCAGGCCGGCTCTGGCGTCCACGCTGCAGGCACCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATAGCTGTTTGATGAGCTaGCGCCGGATGCCGTGTCTG +
Preference number: 5 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHSCLMS*RRMPCL
Trigger: CAGACACGGCATCCGGCGCAAGCTCATCAAACAGCT...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTCGCACTTAAACAGCTaGTCACCATGCGAGCGCACG +
Preference number: 5 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRSHLNS*SPCERT
Trigger: CGTGCGCTCGCATGGTGACAAGCTGTTTAAGTGCGA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGAGGTGCTTGTTCATATaGCTCCGGCAGGAGAACACC +
Preference number: 5 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARRCLFI*LRQENT
Trigger: GGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCT...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTAGGTTCCCGATGCTGTaGAAGATCCGCCCGCAGATC +
Preference number: 5 (lower is better)
Translates to: PPAQSHAGHSEAALGTERRFPML*KIRPQI
Trigger: GATCTGCGGGCGGATCTTCAACAGCATCGGGAACCT...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGTTGCACTCGTACTCCTaGATGCCCTTGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARLHSYS*MPLCSF
Trigger: GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAA...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGAGCACGTCCACTGCTaGCCCACTGTGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAEHVHC*PTVWMS
Trigger: GCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGCCCTGGTGGACACCTaGGTCCCGCACAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTALVDT*VPHSWQ
Trigger: CTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGC...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTAGCACCTCGGGGTGCTaGCGCCGCATGTGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTSTSGC*RRMCRL
Trigger: GAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCT...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 90 bp CGTGGAAAGGAAGAGACACGCAGGTCACTAGTGCAGCCATCCCAATaGCCCTGGCCTGCTGGACGAGGCAAGAAGCCTGTCACGCCCCGC +
Preference number: 5 (lower is better)
Translates to: RGKEETRRSLVQPSQ*PWPAGRGKKPVTPR
Trigger: GCGGGGCGTGACAGGCTTCTTGCCTCGTCCAGCAGGCCAGGGTCATTGGGATGGCTGCACTAGTGACCTGCGTGTCTCTTCCTTTCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470586.5
ENST00000486812.5
CDS-3UTR CAA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTGCAGTCATCCTCGTaGGAGGTGTCGAAGCACACG +
Preference number: 5 (lower is better)
Translates to: PPAQSHAGHSEAALGTERLQSSS*EVSKHT
Trigger: CGTGTGCTTCGACACCTCCAACGAGGATGACTGCAA...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGAATGATCTCTGCCACTaGCTCTGTGGGTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARNDLCH*LCGFLV
Trigger: GACAAGGAACCCACAGAGCAAGTGGCAGAGATCATT...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCGCAGGTGTACTTCTaGTCGCCGTGGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSQVYF*SPWVSR
Trigger: CCTGCTCACCCACGGCGACAAGAAGTACACCTGCGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCTCGCAGGTGTACTTCTaGTCGCCGTGGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: DVTARVPAHADLAVHRTFSQVYF*SPWVSR
Trigger: CCTGCTCACCCACGGCGACAAGAAGTACACCTGCGA...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCAGGTTCCCGATGCTGTaGAAGATCCGCCCGCAGATC +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVRFPML*KIRPQI
Trigger: GATCTGCGGGCGGATCTTCAACAGCATCGGGAACCT...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTACTCCTTGATGCCCTaGTGCAGCTTCATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRYSLMP*CSFMWW
Trigger: CCACCACATGAAGCTGCACAAGGGCATCAAGGAGTA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTCTGCGGTGGCACTCCTaGCACTCGTACTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSLRWHS*HSYSLM
Trigger: CATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAG...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCCTGCGGTGGCACTCCTaGCACTCGTACTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVLRWHS*HSYSLM
Trigger: CATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAG...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TATTCGCTGAAGGTGGCGTCCTCGGGCACCGGAGCACCCGCCTCCTCTTCTGGCTGCCGCTTGCAGTGCTaGAGCATGTTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: YSLKVASSGTGAPASSSGCRLQC*SMLTFC
Trigger: GCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCA...GCCAGAAGAGGAGGCGGGTGCTCCGGTGCCCGAGGACGCCACCTTCAGCGAATA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCATCCCCGTGTGCCGCTaGCAGTGCTTGAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVIPVCR*QCLSML
Trigger: CAACATGCTCAAGCACTGCAAGCGGCACACGGGGAT...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGGCCCTGGTGGACACCTaGGTCCCGCACAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGALVDT*VPHSWQ
Trigger: CTGCCAGCTGTGCGGGACCAAGGTGTCCACCAGGGC...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATCTCTGTACTGCGGAATaGGTCTCGTCGCCTACACTG +
Preference number: 5 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHLCTAE*VSSPTL
Trigger: CAGTGTAGGCGACGAGACCAATTCCGCAGTACAGAG...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAGGGGTCACGGTGATGTaGGTTAAGCCGACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: THSRATLCIWAAVKGGQGGVTVM*VKPTEL
Trigger: GAGCTCAGTCGGCTTAACCAACATCACCGTGACCCC...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGACGGTCAGGATTGAGTaGTCCAGCTGTAACTGGCGT +
Preference number: 5 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRTVRIE*SSCNWR
Trigger: ACGCCAGTTACAGCTGGACAACTCAATCCTGACCGT...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 90 bp TGGTGTCAGTGGTGGTGGTGGCCAGCTTCCCCAGAACCAGCTCCATaGTCCGCTCATCTGGCGTTGCACTCACAGGCTCATCCGGAGGGA +
Preference number: 5 (lower is better)
Translates to: WCQWWWWPASPEPAP*SAHLALHSQAHPEG
Trigger: TCCCTCCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGGGGAAGCTGGCCACCACCACCACTGACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 90 bp TGTGGAACTCCAGCGCGCTCTCGATGCGGAAGGTCTTCTCACAAGTaGCGCAGCGGTACCTGTACTCGCCGTCCACCTCGTTCCTGCTGT +
Preference number: 5 (lower is better)
Translates to: CGTPARSRCGRSSHK*RSGTCTRRPPRSCC
Trigger: ACAGCAGGAACGAGGTGGACGGCGAGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGGAGTTCCACA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000496124.1
CDS GCA 90 bp CACTGCTCGCAGGCGTGGCTCTTCACACCTGAGAACACAGGCATCTaGCACTCAGAGCCGAGCAGCTCCGACCTGCAGTGGCTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: HCSQAWLFTPENTGI*HSEPSSSDLQWLQR
Trigger: TCTTTGCAGCCACTGCAGGTCGGAGCTGCTCGGCTCTGAGTGGCAGATGCCTGTGTTCTCAGGTGTGAAGAGCCACGCCTGCGAGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495217.1
CDS-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTGATCCGGACTCCGGGTaGCGATCCGCTCCGGAAACT +
Preference number: 5 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFDPDSG*RSAPET
Trigger: AGTTTCCGGAGCGGATCGCAACCCGGAGTCCGGATC...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTTGCAGTCATCCTCGTaGGAGGTGTCGAAGCACACG +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVLQSSS*EVSKHT
Trigger: CGTGTGCTTCGACACCTCCAACGAGGATGACTGCAA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGAGCTGTTTGATGAGCTaGCGCCGGATGCCGTGTCTG +
Preference number: 5 (lower is better)
Translates to: AAVPVASPQDSHQWMALESCLMS*RRMPCL
Trigger: CAGACACGGCATCCGGCGCAAGCTCATCAAACAGCT...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTCTGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCTGTTCTGGAAGATCTaGCTGCAGATATTGCACTGG +
Preference number: 5 (lower is better)
Translates to: VCLPRRTLQRSPMPDTARLFWKI*LQILHW
Trigger: CCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAG...CCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGACGGCAGGAGAACACCTaGCCACACACCGGGCACCCG +
Preference number: 5 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRRQENT*PHTGHP
Trigger: CGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCCG...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHEEIPI*PINSSL
Trigger: GAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAAGGTTCCCGATGCTGTaGAAGATCCGCCCGCAGATC +
Preference number: 5 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGRFPML*KIRPQI
Trigger: GATCTGCGGGCGGATCTTCAACAGCATCGGGAACCT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTAGGTACTCGCGGACATaGTCGTGCACACGCATGTGC +
Preference number: 5 (lower is better)
Translates to: AQSHAGHSEAALGTERFPRYSRT*SCTRMC
Trigger: GCACATGCGTGTGCACGACAATGTCCGCGAGTACCT...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAAGGTACTCGCGGACATaGTCGTGCACACGCATGTGC +
Preference number: 5 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGRYSRT*SCTRMC
Trigger: GCACATGCGTGTGCACGACAATGTCCGCGAGTACCT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTGGCGCAGCGCGTGCTaGGTCTTCATGCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPWRSAC*VFMPFP
Trigger: TGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGATCCCCGTGTGCCGCTaGCAGTGCTTGAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: AAVPVASPQDSHQWMALEIPVCR*QCLSML
Trigger: CAACATGCTCAAGCACTGCAAGCGGCACACGGGGAT...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCGGTCACGTACTTCTaGTCGCACACGGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSVTYF*SHTEHV
Trigger: GACGTGCTCCGTGTGCGACAAGAAGTACGTGACCGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGGGGGTCACGGTGATGTaGGTTAAGCCGACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: AAVPVASPQDSHQWMALEGVTVM*VKPTEL
Trigger: GAGCTCAGTCGGCTTAACCAACATCACCGTGACCCC...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGAACCAGGGTCGTCAGGTaGATGAAATGGGCCACAGAC +
Preference number: 5 (lower is better)
Translates to: THSRATLCIWAAVKGGQGTRVVR*MKWATD
Trigger: GTCTGTGGCCCATTTCATCAACCTGACGACCCTGGT...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGAGGAAGGGATGACCTaGCCCTGCTTAACACAAAGG +
Preference number: 5 (lower is better)
Translates to: PPAQSHAGHSEAALGTEREEGMT*PCLTQR
Trigger: CCTTTGTGTTAAGCAGGGCAAGGTCATCCCTTCCTC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTCGTCTGATCTCCAAGTaGGGAGGAAGGGATGACCTT +
Preference number: 5 (lower is better)
Translates to: PPAQSHAGHSEAALGTERRLISK*GGRDDL
Trigger: AAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACG...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCACCTCTCAGTGTTTCTaGTCGTGGGCAGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: DVTARVPAHADLAVHRTFTSQCF*SWAAGG
Trigger: CCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAGTCCTGTCCTGCAGTaGTGGAACTCCAGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPSPVLQ*WNSSAL
Trigger: GAGCGCGCTGGAGTTCCACAACTGCAGGACAGGACT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000422911.6
ENST00000449395.6
CDS TCA 90 bp ACCCTCCTGGACTCAAAGGGACCGAACTGTGTCCGCTTGACGAGCTaGGTGATGGCGAACACCCCCTCGGCTCCATCTTCCAGTCGTCTG +
Preference number: 5 (lower is better)
Translates to: TLLDSKGPNCVRLTS*VMANTPSAPSSSRL
Trigger: CAGACGACTGGAAGATGGAGCCGAGGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGACACAGTTCGGTCCCTTTGAGTCCAGGAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 90 bp GGCCAGCTTCCCCAGAACCAGCTCCATGATCCGCTCATCTGGCGTTaGACTCACAGGCTCATCCGGAGGGACCTCGGTAATGATCTCTGC +
Preference number: 5 (lower is better)
Translates to: GQLPQNQLHDPLIWR*THRLIRRDLGNDLC
Trigger: GCAGAGATCATTACCGAGGTCCCTCCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGGGGAAGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 90 bp GAGAGGTTGCTGTCCTGCAGTTGTGGAACTCCAGCGCGCTCTCGATaGGGAAGGTCTTCTCACAAGTGCCGCAGCGGTACCTGTACTCGC +
Preference number: 5 (lower is better)
Translates to: ERLLSCSCGTPARSR*GRSSHKCRSGTCTR
Trigger: GCGAGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGCAACCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS CCA 90 bp CCAGGCGGCACAGGACCCGTGTTCCCCGGAGCGAAGGGAAACGTGTaGCACGTAATTATGTATGTGGTCCACAGAGAGGGAGACAGGGAG +
Preference number: 5 (lower is better)
Translates to: PGGTGPVFPGAKGNV*HVIMYVVHREGDRE
Trigger: CTCCCTGTCTCCCTCTCTGTGGACCACATACATAATTACGTGCCACACGTTTCCCTTCGCTCCGGGGAACACGGGTCCTGTGCCGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS-3UTR CAA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTGATCCGGACTCCGGGTaGCGATCCGCTCCGGAAACT +
Preference number: 5 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCDPDSG*RSAPET
Trigger: AGTTTCCGGAGCGGATCGCAACCCGGAGTCCGGATC...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTCCTGGAGGAAGGCTTTaGGCTTGTTCTAAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: AQSHAGHSEAALGTERFPPGGRL*ACSKWP
Trigger: GGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGG...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGCTGCTGCCTCGCTTaGGCTGCCTGGAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGSCCLA*AAWRKA
Trigger: AGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCT...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGAGCTGCTGCCTCGCTTaGGCTGCCTGGAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTESCCLA*AAWRKA
Trigger: AGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCT...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATTCAGCTTTGGACACTTaGGGTTTTCTCCCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHSALDT*GFLPLR
Trigger: TCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTGA...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTCCGCTCATCTGGCGTaGCACTCACAGGCTCATCCG +
Preference number: 5 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFSAHLA*HSQAHP
Trigger: CGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATCCGCTCATCTGGCGTaGCACTCACAGGCTCATCCG +
Preference number: 5 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTSAHLA*HSQAHP
Trigger: CGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSEEIPI*PINSSL
Trigger: GAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAAGGTACTCGCGGACATaGTCGTGCACACGCATGTGC +
Preference number: 5 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPRYSRT*SCTRMC
Trigger: GCACATGCGTGTGCACGACAATGTCCGCGAGTACCT...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTACTCCTTGATGCCCTaGTGCAGCTTCATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVYSLMP*CSFMWW
Trigger: CCACCACATGAAGCTGCACAAGGGCATCAAGGAGTA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATGAGCACGTCCACTGCTaGCCCACTGTGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHEHVHC*PTVWMS
Trigger: GCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTC...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCGAGCACGTCCACTGCTaGCCCACTGTGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFEHVHC*PTVWMS
Trigger: GCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTC...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTCTCTGTACTGCGGAATaGGTCTCGTCGCCTACACTG +
Preference number: 5 (lower is better)
Translates to: AQSHAGHSEAALGTERFPLCTAE*VSSPTL
Trigger: CAGTGTAGGCGACGAGACCAATTCCGCAGTACAGAG...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCATGGTGTGGTCACATTaGGGTCACCCAGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: DVTARVPAHADLAVHRTFMVWSH*GHPGSP
Trigger: TGGTGACCCTGGGTGACCCAAATGTGACCACACCAT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGGGGCGTGATGGAGTaGACCAGGGTCGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHRGVME*TRVVRL
Trigger: CAACCTGACGACCCTGGTCAACTCCATCACGCCCCT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGTGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACAGGGGCGTGATGGAGTaGACCAGGGTCGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QCLSMLTFCANLRWHSLHRGVME*TRVVRL
Trigger: CAACCTGACGACCCTGGTCAACTCCATCACGCCCCT...GTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACAATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTACCTCTCAGTGTTTCTaGTCGTGGGCAGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPTSQCF*SWAAGG
Trigger: CCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGGATGCCTGGAGCACTaGTATCTGGAGAATGGAGAC +
Preference number: 5 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAGCLEH*YLENGD
Trigger: GTCTCCATTCTCCAGATACAAGTGCTCCAGGCATCC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGTGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACGTTGCTGTCCTGCAGTaGTGGAACTCCAGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: QCLSMLTFCANLRWHSLHVAVLQ*WNSSAL
Trigger: GAGCGCGCTGGAGTTCCACAACTGCAGGACAGCAAC...GTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS GCA 90 bp GGGGTGTGTCCTGCTCCTTCTCGGGAGCTGCTGCCTCGCTTTGGCTaGCTGGAGGAAGGCTTTTGGCTTGTTCTAAGTGGCCCAACAGAT +
Preference number: 5 (lower is better)
Translates to: GVCPAPSRELLPRFG*LEEGFWLVLSGPTD
Trigger: ATCTGTTGGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAGCAGGACACACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCCAACAGATGTTCATaGAGGAGCTGCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSPNRCS*RSCSSR
Trigger: CCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGGG...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACACACAGCCGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGATGCTCTGTGGGTTCCTaGTCTTCCACGATGACTAGA +
Preference number: 5 (lower is better)
Translates to: THSRATLCIWAAVKGGQGCSVGS*SSTMTR
Trigger: TCTAGTCATCGTGGAAGACAAGGAACCCACAGAGCA...TCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCGGCTGTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCAATGATCTCTGCCACTaGCTCTGTGGGTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVNDLCH*LCGFLV
Trigger: GACAAGGAACCCACAGAGCAAGTGGCAGAGATCATT...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACTGAGTCGCGGCCGCAGTAATGATCTCTGCCACTaGCTCTGTGGGTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: KVPHGHRLEIGKLSRGRSNDLCH*LCGFLV
Trigger: GACAAGGAACCCACAGAGCAAGTGGCAGAGATCATT...ACTGCGGCCGCGACTCAGTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCCGCTCATCTGGCGTaGCACTCACAGGCTCATCCG +
Preference number: 5 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSAHLA*HSQAHP
Trigger: CGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTTCGCACTTAAACAGCTaGTCACCATGCGAGCGCACG +
Preference number: 5 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPSHLNS*SPCERT
Trigger: CGTGCGCTCGCATGGTGACAAGCTGTTTAAGTGCGA...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTCATCTGTCCTGCAGTaGTGGAACTCCAGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHSSVLQ*WNSSAL
Trigger: GAGCGCGCTGGAGTTCCACAACTGCAGGACAGATGA...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTCACAGGCAAACTTCTaGTCGCCGTGCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVSQANF*SPCFFL
Trigger: CAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTCGCAGGTGTACTTCTaGTCGCCGTGGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMSQVYF*SPWVSR
Trigger: CCTGCTCACCCACGGCGACAAGAAGTACACCTGCGA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GGTCCCGCACAGCTGGCAGCTCTGCGCCTCCACCTTGTCGTGTGTGAGCTGAACATCAACGCGATGTCCTaGAAGTGGACATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: GPAQLAALRLHLVVCELNINAMS*KWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGTTGAT...GTTCAGCTCACACACGACAAGGTGGAGGCGCAGAGCTGCCAGCTGTGCGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCGCGCTCTCGTCAGAATaGTCATCGTTTTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGAALSSE*SSFSSE
Trigger: CTCGGAAGAAAACGATGACAATTCTGACGAGAGCGC...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGTGGCGCAGCGCGTGCTaGGTCTTCATGCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWWRSAC*VFMPFP
Trigger: TGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCA...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GCAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTACTCCTTGATGCCCTaGTGCAGCTTCATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: AAVPVASPQDSHQWMALEYSLMP*CSFMWW
Trigger: CCACCACATGAAGCTGCACAAGGGCATCAAGGAGTA...CTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCTGCGGTGGCACTCCTaGCACTCGTACTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTLRWHS*HSYSLM
Trigger: CATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAG...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTG +
Preference number: 5 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSQCLSM*TFCANL
Trigger: CAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCACAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTG +
Preference number: 5 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPQCLSM*TFCANL
Trigger: CAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGATCCGCCCGCAGATCTCGCAGGGGTGGATGTACTTCTGCACGTTGGGGTCCGACTGTGTGGATGAGCTaGTGGGTCTCCATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: RSARRSRRGGCTSARWGPTVWMS*WVSMVF
Trigger: GAACACCATGGAGACCCACAAGCTCATCCACACAGT...CGGACCCCAACGTGCAGAAGTACATCCACCCCTGCGAGATCTGCGGGCGGATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAACGGTCAGGATTGAGTaGTCCAGCTGTAACTGGCGT +
Preference number: 5 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGTVRIE*SSCNWR
Trigger: ACGCCAGTTACAGCTGGACAACTCAATCCTGACCGT...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGAGGGGCGTGATGGAGTaGACCAGGGTCGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTERGVME*TRVVRL
Trigger: CAACCTGACGACCCTGGTCAACTCCATCACGCCCCT...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGGGCGTGATGGAGTaGACCAGGGTCGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGRGVME*TRVVRL
Trigger: CAACCTGACGACCCTGGTCAACTCCATCACGCCCCT...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGCCTTCCACGCCGGACCCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 5 (lower is better)
Translates to: CLPRRTLQRSPMPDTARRMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...CCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGGGTCCGGCGTGGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TCCATGATGTGCTTCAGGTACTCCTTCCCCCGGCCGAAGGTGAGCTGGCACCGCGGATGCCTGGAGCACTaGTATCTGGAGAATGGAGAC +
Preference number: 5 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHRGCLEH*YLENGD
Trigger: GTCTCCATTCTCCAGATACAAGTGCTCCAGGCATCC...GCGGTGCCAGCTCACCTTCGGCCGGGGGAAGGAGTACCTGAAGCACATCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGGCCGGATGCCGTGTTTaGGAACCGAGCTGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGAGCRV*EPSWCQ
Trigger: CTGACACCAGCTCGGTTCCAAAACACGGCATCCGGC...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS-3UTR CAA 90 bp TGGCGTTCAGGGGTGGTAAGGTGCCCCACGGCCACCGGCTGGAGATTGGTAAACAGCTGTTTGATGAGCTaGCGCCGGATGCCGTGTTTT +
Preference number: 5 (lower is better)
Translates to: WRSGVVRCPTATGWRLVNSCLMS*RRMPCF
Trigger: AAAACACGGCATCCGGCGCAAGCTCATCAAACAGCT...GTTTACCAATCTCCAGCCGGTGGCCGTGGGGCACCTTACCACCCCTGAACGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS GCA 90 bp GCGAGCGCACGTGCCTGCTCAGGTTGCTGCTGTTCTGGAAGATCTTaGTGCAGATATTGCACTGGTAAACCCGCTTGTGCTCCCCGAGCT +
Preference number: 5 (lower is better)
Translates to: ASARACSGCCCSGRS*CRYCTGKPACAPRA
Trigger: AGCTCGGGGAGCACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACGTGCGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000496124.1
CDS GCA 90 bp TCTTGTCATCTGTCCTGCAGTTGTGGAACTCCAGCGCGCTCTCGATaGGGAAGGTCTTCTCACAAGTGCCGCAGCGGTACCTGTACTCGC +
Preference number: 5 (lower is better)
Translates to: SCHLSCSCGTPARSR*GRSSHKCRSGTCTR
Trigger: GCGAGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGATGACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000447016.6
ENST00000489661.5
ENST00000491486.5
ENST00000496124.1
CDS GCA 90 bp ATACTGGACAGAGATTCCCCAGGAAAGAGATGGACAGTACACTTCTaGAGTCCAGGGGCAGAGGAGGCTGGCACGCCCGGCCAACCCAAA +
Preference number: 5 (lower is better)
Translates to: ILDRDSPGKRWTVHF*SPGAEEAGTPGQPK
Trigger: TTTGGGTTGGCCGGGCGTGCCAGCCTCCTCTGCCCCTGGACTGCAGAAGTGTACTGTCCATCTCTTTCCTGGGGAATCTCTGTCCAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS GCA 90 bp GTCAGTCCTGGCTCATGGATTGGCCTCACGGGAGCCAGAAGCGGATaGTTTAATAGACCAACACCAGAGGTGGCAATTGCTCCCGCACGG +
Preference number: 5 (lower is better)
Translates to: VSPGSWIGLTGARSG*FNRPTPEVAIAPAR
Trigger: CCGTGCGGGAGCAATTGCCACCTCTGGTGTTGGTCTATTAAAGCATCCGCTTCTGGCTCCCGTGAGGCCAATCCATGAGCCAGGACTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS GCA 90 bp AAAACGGCCTCCTTCCAAAACTTCCCAGCTAATCCCGAGCCTGTATaGGAGAAAGGAGGGAATGCGCCCGGGCGTCACTCCCAGCTTCCA +
Preference number: 5 (lower is better)
Translates to: KTASFQNFPANPEPV*EKGGNAPGRHSQLP
Trigger: TGGAAGCTGGGAGTGACGCCCGGGCGCATTCCCTCCTTTCTCGCATACAGGCTCGGGATTAGCTGGGAAGTTTTGGAAGGAGGCCGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489661.5
CDS CCA 90 bp TCTTCCGAGGAGATCCCGATCTTGCCGATAAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATGTCCTTGCCACACACCGGGCACCCG +
Preference number: 5 (lower is better)
Translates to: SSEEIPILPINSSLW*SSINAMSLPHTGHP
Trigger: CGGGTGCCCGGTGTGTGGCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491486.5
CDS-3UTR CAA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATCCCAACAGATGTTCATaGAGGAGCTGCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHPNRCS*RSCSSR
Trigger: CCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGGG...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGCCCAACAGATGTTCATaGAGGAGCTGCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRPNRCS*RSCSSR
Trigger: CCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGGG...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGATCCGCTCATCTGGCGTaGCACTCACAGGCTCATCCG +
Preference number: 5 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRSAHLA*HSQAHP
Trigger: CGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGA...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCCTGTTCTGGAAGATCTaGCTGCAGATATTGCACTGG +
Preference number: 5 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGALFWKI*LQILHW
Trigger: CCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAG...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATTCGCACTTAAACAGCTaGTCACCATGCGAGCGCACG +
Preference number: 5 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHSHLNS*SPCERT
Trigger: CGTGCGCTCGCATGGTGACAAGCTGTTTAAGTGCGA...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGGTCCAGGTCATCGATCCTCACCGCGAGCACCTCGGGGTGCTTGCGCCGCATTGCTTTAGGCTCTCTTaGCGGCTGAACAATTTTGCA +
Preference number: 5 (lower is better)
Translates to: VVQVIDPHREHLGVLAPHCFRLS*RLNNFA
Trigger: TGCAAAATTGTTCAGCCGCAAAGAGAGCCTAAAGCA...ATGCGGCGCAAGCACCCCGAGGTGCTCGCGGTGAGGATCGATGACCTGGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTCGCCGTGCTTCTTCTaGTGCTTGGAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFSPCFF*CLERLL
Trigger: CAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCACAGGCAAACTTCTaGTCGCCGTGCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSQANF*SPCFFL
Trigger: CAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACCGGCAGGAGAACACCTaGCCACACACCGGGCACCCG +
Preference number: 5 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYRQENT*PHTGHP
Trigger: CGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCCG...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTTGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTWVSRC*FILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCA...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACGTGACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCATCAACGCGATGTCCTaGAAGTGGACATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: DVTARVPAHADLAVHRTFINAMS*KWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGTTGAT...GAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTCACGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCGCTCTCGTCAGAATaGTCATCGTTTTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: PPRKTHTSGWHSSPQLHGALSSE*SSFSSE
Trigger: CTCGGAAGAAAACGATGACAATTCTGACGAGAGCGC...TCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGCGCTCTCGTCAGAATaGTCATCGTTTTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: AQSHAGHSEAALGTERFPALSSE*SSFSSE
Trigger: CTCGGAAGAAAACGATGACAATTCTGACGAGAGCGC...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGTGGCGCAGCGCGTGCTaGGTCTTCATGCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMWRSAC*VFMPFP
Trigger: TGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCA...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTTGCACTCGTACTCCTaGATGCCCTTGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSLHSYS*MPLCSF
Trigger: GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTCAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTG +
Preference number: 5 (lower is better)
Translates to: GTRVHSCTEPRVQNEFSTQCLSM*TFCANL
Trigger: CAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG...AGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGTGCTTGAGCATGTTGACCTTCTGCGCGAACCTGCGGTGGCACTCCTTGCACTGCCGCTTGCAGTGCTaGAGCATGTTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: QCLSMLTFCANLRWHSLHCRLQC*SMLTFC
Trigger: GCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCA...GTGCAAGGAGTGCCACCGCAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCGGTCACGTACTTCTaGTCGCACACGGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSVTYF*SHTEHV
Trigger: GACGTGCTCCGTGTGCGACAAGAAGTACGTGACCGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AAACTTCTCCCCACACCTCTCAGTGTTTCTTGTCGTGGGCAGCAGGAGGGCTGGTCGGTCACGTACTTCTaGTCGCACACGGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: KLLPTPLSVSCRGQQEGWSVTYF*SHTEHV
Trigger: GACGTGCTCCGTGTGCGACAAGAAGTACGTGACCGA...CCAGCCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGTGTGGGGAGAAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCCTCTGTACTGCGGAATaGGTCTCGTCGCCTACACTG +
Preference number: 5 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFLCTAE*VSSPTL
Trigger: CAGTGTAGGCGACGAGACCAATTCCGCAGTACAGAG...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTACGTCATTTTGGCGGTaGTGCAACATGGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFTSFWR*CNMAEP
Trigger: CGGCTCTGCCATGTTGCACAACCGCCAAAATGACGT...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATACGTCATTTTGGCGGTaGTGCAACATGGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHTSFWR*CNMAEP
Trigger: CGGCTCTGCCATGTTGCACAACCGCCAAAATGACGT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TCACACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGCGTCTGATCTCCAAGTaGGGAGGAAGGGATGACCTT +
Preference number: 5 (lower is better)
Translates to: SHARAFQRPEPLLNPQTRRLISK*GGRDDL
Trigger: AAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACG...CCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 5 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHTSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACTAAGCTGGCTCCCCAGGGGCGTGATGGAGTTGACCAGGGTCGTCAGGTTGATACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 5 (lower is better)
Translates to: TKLAPQGRDGVDQGRQVDTSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...ATCAACCTGACGACCCTGGTCAACTCCATCACGCCCCTGGGGAGCCAGCTTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTACCTCTCAGTGTTTCTaGTCGTGGGCAGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCTSQCF*SWAAGG
Trigger: CCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGT...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTGGATGCCTGGAGCACTaGTATCTGGAGAATGGAGAC +
Preference number: 5 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSGCLEH*YLENGD
Trigger: GTCTCCATTCTCCAGATACAAGTGCTCCAGGCATCC...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS CCA 90 bp TCACGGGAGCCAGAAGCGGATGCTTTAATAGACCAACACCAGAGGTaGCAATTGCTCCCGCACGGCCACTCGTGCCCACGGATTCTAAGA +
Preference number: 5 (lower is better)
Translates to: SREPEADALIDQHQR*QLLPHGHSCPRILR
Trigger: TCTTAGAATCCGTGGGCACGAGTGGCCGTGCGGGAGCAATTGCCACCTCTGGTGTTGGTCTATTAAAGCATCCGCTTCTGGCTCCCGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS-3UTR CAA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGCCCAACAGATGTTCATaGAGGAGCTGCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMPNRCS*RSCSSR
Trigger: CCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGGG...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CACTTGGCACAGAACGTTTTCCTGTGGCCTCCCCGCAAGACTCACACCAGTGGACCTGGAGGAAGGCTTTaGGCTTGTTCTAAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: HLAQNVFLWPPRKTHTSGPGGRL*ACSKWP
Trigger: GGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGG...TCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGAAAACGTTCTGTGCCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR CAA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAGAGGCTGCTCAGCTTaGGACACTTTGGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPRGCSA*DTLGFL
Trigger: GAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTCT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGGAAAGCCCAAGACGCCGCCTCTAGTGGGGAAGCCATGAGCCTTCCGCCTAATGATCTCTGCCACTaGCTCTGTGGGTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: NGKAQDAASSGEAMSLPPNDLCH*LCGFLV
Trigger: GACAAGGAACCCACAGAGCAAGTGGCAGAGATCATT...AGGCGGAAGGCTCATGGCTTCCCCACTAGAGGCGGCGTCTTGGGCTTTCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTCCACAGCTGCACGGAGCCTGCTTTAGGCTCTCTTaGCGGCTGAACAATTTTGCA +
Preference number: 5 (lower is better)
Translates to: PRKTHTSGWHSSPQLHGACFRLS*RLNNFA
Trigger: TGCAAAATTGTTCAGCCGCAAAGAGAGCCTAAAGCA...GGCTCCGTGCAGCTGTGGACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTTCACATTGGAACGTCTaGTCATCTGTCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: AQSHAGHSEAALGTERFPSHWNV*SSVLQL
Trigger: CAACTGCAGGACAGATGACAAGACGTTCCAATGTGA...AGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CAA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTTCGCCGTGCTTCTTCTaGTGCTTGGAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCSPCFF*CLERLL
Trigger: CAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGA...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATCGCCGTGCTTCTTCTaGTGCTTGGAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRSPCFF*CLERLL
Trigger: CAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGA...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCTGTACCTGTGGCCTCCCCGCAAGACTCACACCAGTGGATGGCACTCGAGTTCACAGGCAAACTTCTaGTCGCCGTGCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: QLYLWPPRKTHTSGWHSSSQANF*SPCFFL
Trigger: CAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGA...ACTCGAGTGCCATCCACTGGTGTGAGTCTTGCGGGGAGGCCACAGGTACAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACCGGCAGGAGAACACCTaGCCACACACCGGGCACCCG +
Preference number: 5 (lower is better)
Translates to: TVATNRVPGKLRANFSPHRQENT*PHTGHP
Trigger: CGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCCG...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGAGGTGCTTGTTCATATaGCTCCGGCAGGAGAACACC +
Preference number: 5 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRRCLFI*LRQENT
Trigger: GGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCT...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATCGCAGGTGTACTTCTaGTCGCCGTGGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARSQVYF*SPWVSR
Trigger: CCTGCTCACCCACGGCGACAAGAAGTACACCTGCGA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATCCACGCGGAAGAACTaGCGCCCGCAGATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGSTRKN*RPQISQ
Trigger: CTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGGA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTATCCACGCGGAAGAACTaGCGCCCGCAGATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: LPAATCEYCLCSHRNRALSTRKN*RPQISQ
Trigger: CTGCGAGATCTGCGGGCGCAAGTTCTTCCGCGTGGA...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCAATCAACGCGATGTCCTaGAAGTGGACATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: PRRLQDQVRLSTPHGFSPINAMS*KWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGTTGAT...TGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGGCACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACATGTACTTCTGCACGTaGGGGTCCGGCAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: WHSSPQLHGATGPKRILHMYFCT*GSGRFS
Trigger: TGAAAACCTGCCGGACCCCAACGTGCAGAAGTACAT...GTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTATGTACTTCTGCACGTaGGGGTCCGGCAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFMYFCT*GSGRFS
Trigger: TGAAAACCTGCCGGACCCCAACGTGCAGAAGTACAT...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATAGTTGTTGCCGCTTGCAGTGCTaGAGCATGTTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: GCRIRCGSARLMVSAHSCCRLQC*SMLTFC
Trigger: GCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCA...ACAACTATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGTGCCGCTTGCAGTGCTaGAGCATGTTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGCRLQC*SMLTFC
Trigger: GCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCA...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATAGCACCTCGGGGTGCTaGCGCCGCATGTGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDSTSGC*RRMCRL
Trigger: GAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCT...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACACGTCATTTTGGCGGTaGTGCAACATGGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDTSFWR*CNMAEP
Trigger: CGGCTCTGCCATGTTGCACAACCGCCAAAATGACGT...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACAGATCTGGACGTCATTTaGGCGGTTGTGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTDLDVI*AVVQHG
Trigger: GCCATGTTGCACAACCGCCAAAATGACGTCCAGATC...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACACCAGGGTCGTCAGGTaGATGAAATGGGCCACAGAC +
Preference number: 5 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHTRVVR*MKWATD
Trigger: GTCTGTGGCCCATTTCATCAACCTGACGACCCTGGT...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTCGTCTGATCTCCAAGTaGGGAGGAAGGGATGACCTT +
Preference number: 5 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFRLISK*GGRDDL
Trigger: AAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACG...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGTCCACACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 5 (lower is better)
Translates to: TAARSHGSKTNSPLRWVHTSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...GTGGACCCATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 5 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTETSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGCGCGACCCTCTGCATCTGGGCAGCTGTGAAGGGTGGACAGGGACAGATGGTCTTAAGACAACCCATTTaGCCTCAGACAGTGACCCTA +
Preference number: 5 (lower is better)
Translates to: RATLCIWAAVKGGQGQMVLRQPI*PQTVTL
Trigger: TAGGGTCACTGTCTGAGGCAAAATGGGTTGTCTTAA...GACCATCTGTCCCTGTCCACCCTTCACAGCTGCCCAGATGCAGAGGGTCGCGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS TCA 90 bp GCTGAGTGGTTTAGGAAAGTGTGCATGCTGGCACTTCTTGAATGCTaGTTCCACACGCCCTCCACCCCGCTCATCCCCAGCAGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: AEWFRKVCMLALLEC*FHTPSTPLIPSSLK
Trigger: CTTCAAGCTGCTGGGGATGAGCGGGGTGGAGGGCGTGTGGAATCAGCATTCAAGAAGTGCCAGCATGCACACTTTCCTAAACCACTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS TCA 90 bp CAGCCATCTCTGACACCGGCATGTCCTTCCTGCAACCTGCTTCTCTaGTGCCCGTTGCTGAGTGGTTTAGGAAAGTGTGCATGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: QPSLTPACPSCNLLL*CPLLSGLGKCACWH
Trigger: GTGCCAGCATGCACACTTTCCTAAACCACTCAGCAACGGGCATCAGAGAAGCAGGTTGCAGGAAGGACATGCCGGTGTCAGAGATGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 90 bp AGCGCACGTGCCTGCTCAGGTTGCTGCTGTTCTGGAAGATCTTGCTaGAGATATTGCACTGGTAAACCCGCTTGTGCTCCCCGAGCTGTT +
Preference number: 5 (lower is better)
Translates to: SARACSGCCCSGRSC*RYCTGKPACAPRAV
Trigger: AACAGCTCGGGGAGCACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACGTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000496124.1
CDS-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGACCAGCATCATCCAGTaGCAGTCATCCTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGTSIIQ*QSSSLE
Trigger: CTCCAACGAGGATGACTGCAACTGGATGATGCTGGT...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACCGGGACCAGCATCATCCAGTaGCAGTCATCCTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: SRCLFILLRQENTLPHTGTSIIQ*QSSSLE
Trigger: CTCCAACGAGGATGACTGCAACTGGATGATGCTGGT...CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTAGCTGCTGCCTCGCTTaGGCTGCCTGGAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASSCCLA*AAWRKA
Trigger: AGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCT...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGATGCTCCCCGAGCTGTTaGATGAGCTTGCGCCGGATG +
Preference number: 5 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRCSPSC*MSLRRM
Trigger: CATCCGGCGCAAGCTCATCAAACAGCTCGGGGAGCA...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACAGCACGTGTCCCCGCACACGCAGACCTGGCTGTTCACCGCACATTCAGTTTTCACAGGCAAACTTCTaGTCGCCGTGCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: DSTCPRTRRPGCSPHIQFSQANF*SPCFFL
Trigger: CAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGA...AAACTGAATGTGCGGTGAACAGCCAGGTCTGCGTGTGCGGGGACACGTGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGCAGGTGCTTGTTCATATTGCTCCGGCAGGAGAACACCTTGCCACACACCGGGACTGTGTGGATGAGCTaGTGGGTCTCCATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: SRCLFILLRQENTLPHTGTVWMS*WVSMVF
Trigger: GAACACCATGGAGACCCACAAGCTCATCCACACAGT...CCCGGTGTGTGGCAAGGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAGAGCACGTCCACTGCTaGCCCACTGTGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: LKILLLSQLHFPEPCVGREHVHC*PTVWMS
Trigger: GCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTC...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGATCGGTCACGTACTTCTaGTCGCACACGGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARSVTYF*SHTEHV
Trigger: GACGTGCTCCGTGTGCGACAAGAAGTACGTGACCGA...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGAACGGTCAGGATTGAGTaGTCCAGCTGTAACTGGCGT +
Preference number: 5 (lower is better)
Translates to: SLSRTLCRANTGSVRGGRTVRIE*SSCNWR
Trigger: ACGCCAGTTACAGCTGGACAACTCAATCCTGACCGT...TCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGGATCTGGACGTCATTTaGGCGGTTGTGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGDLDVI*AVVQHG
Trigger: GCCATGTTGCACAACCGCCAAAATGACGTCCAGATC...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGACCAGGGTCGTCAGGTaGATGAAATGGGCCACAGAC +
Preference number: 5 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMTRVVR*MKWATD
Trigger: GTCTGTGGCCCATTTCATCAACCTGACGACCCTGGT...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: LPAATCEYCLCSHRNRALIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTGTCGGGCGAACACTGGTTCTGTAAGGGGAGGCAGATGCGGCCCCGGCCCAGGTACATCTGTGCACCTTaGGAATTGAAGTTTAAACAG +
Preference number: 5 (lower is better)
Translates to: VSGEHWFCKGRQMRPRPRYICAP*ELKFKQ
Trigger: CTGTTTAAACTTCAATTCCAAAGGTGCACAGATGTA...CCTGGGCCGGGGCCGCATCTGCCTCCCCTTACAGAACCAGTGTTCGCCCGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS CCA 90 bp TCTTTGACCATGACCACTGGGCCCAGCTCGGGACATTCGGAGTCGTaGTACTGGCTGCAGTCTTCACACCAGATGAACATGATCTCTTCG +
Preference number: 5 (lower is better)
Translates to: SLTMTTGPSSGHSES*YWLQSSHQMNMISS
Trigger: CGAAGAGATCATGTTCATCTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGAACCAGCATCATCCAGTaGCAGTCATCCTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRTSIIQ*QSSSLE
Trigger: CTCCAACGAGGATGACTGCAACTGGATGATGCTGGT...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGACCCAACAGATGTTCATaGAGGAGCTGCAGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARPNRCS*RSCSSR
Trigger: CCTGGAGCTGCAGCTCCTCAATGAACATCTGTTGGG...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGTGCTCTGTGGGTTCCTaGTCTTCCACGATGACTAGA +
Preference number: 5 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMCSVGS*SSTMTR
Trigger: TCTAGTCATCGTGGAAGACAAGGAACCCACAGAGCA...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGAACACTGGTTCTGTAAGGGGAATGATCTCTGCCACTaGCTCTGTGGGTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LSFTFPNPVSGEHWFCKGNDLCH*LCGFLV
Trigger: GACAAGGAACCCACAGAGCAAGTGGCAGAGATCATT...CCCCTTACAGAACCAGTGTTCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGATGGGATGCCGTGTCTGCTaGAGAGAATTAAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RVHSCTEPRVQNEFSTEMGCRVC*RELSSS
Trigger: AGAGGAGCTTAATTCTCTCAAGCAGACACGGCATCC...CATCTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTGCTCCCCGAGCTGTTaGATGAGCTTGCGCCGGATG +
Preference number: 5 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYCSPSC*MSLRRM
Trigger: CATCCGGCGCAAGCTCATCAAACAGCTCGGGGAGCA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTCGCAGGTGTACTTCTaGTCGCCGTGGGTGAGCAGG +
Preference number: 5 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLSQVYF*SPWVSR
Trigger: CCTGCTCACCCACGGCGACAAGAAGTACACCTGCGA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGGATGTACTTCTGCACGTTGGGGTCCGGCAGGTTTTCACGGTGGATGACCATGTACTCCTTGATGCCCTaGTGCAGCTTCATGTGGTGG +
Preference number: 5 (lower is better)
Translates to: WMYFCTLGSGRFSRWMTMYSLMP*CSFMWW
Trigger: CCACCACATGAAGCTGCACAAGGGCATCAAGGAGTA...CATGGTCATCCACCGTGAAAACCTGCCGGACCCCAACGTGCAGAAGTACATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGACTGCGGTGGCACTCCTaGCACTCGTACTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRLRWHS*HSYSLM
Trigger: CATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAG...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATCCCCGTGTGCCGCTaGCAGTGCTTGAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWIPVCR*QCLSML
Trigger: CAACATGCTCAAGCACTGCAAGCGGCACACGGGGAT...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTAGGGGTCACGGTGATGTaGGTTAAGCCGACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LPAATCEYCLCSHRNRALGVTVM*VKPTEL
Trigger: GAGCTCAGTCGGCTTAACCAACATCACCGTGACCCC...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAACGTCATTTTGGCGGTaGTGCAACATGGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARTSFWR*CNMAEP
Trigger: CGGCTCTGCCATGTTGCACAACCGCCAAAATGACGT...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCCAGCGCAGTCCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTGAAGTGCTGAGAAAGTaGCGTTTTGAAAAACACAAT +
Preference number: 5 (lower is better)
Translates to: PPAQSHAGHSEAALGTEREVLRK*RFEKHN
Trigger: ATTGTGTTTTTCAAAACGCAACTTTCTCAGCACTTC...ACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGGACTGCGCTGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS TCA 90 bp TTCTCCCTGACACGTTCCAGGCACTGTAGGGCCTTCAGGAGAAGGTaGATTGCAAGAAGACAGCAGACAATGAACGCTCATCCCCAGCCT +
Preference number: 5 (lower is better)
Translates to: FSLTRSRHCRAFRRR*IARRQQTMNAHPQP
Trigger: AGGCTGGGGATGAGCGTTCATTGTCTGCTGTCTTCTTGCAATTCACCTTCTCCTGAAGGCCCTACAGTGCCTGGAACGTGTCAGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS-3UTR CAA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTTGCAGTCATCCTCGTaGGAGGTGTCGAAGCACACG +
Preference number: 5 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWLQSSS*EVSKHT
Trigger: CGTGTGCTTCGACACCTCCAACGAGGATGACTGCAA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTACCTGGAGGAAGGCTTTaGGCTTGTTCTAAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LPAATCEYCLCSHRNRALPGGRL*ACSKWP
Trigger: GGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGG...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAGCTGCTGCCTCGCTTaGGCTGCCTGGAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRSCCLA*AAWRKA
Trigger: AGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCT...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACCTGTTCTGGAAGATCTaGCTGCAGATATTGCACTGG +
Preference number: 5 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDLFWKI*LQILHW
Trigger: CCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAG...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACTCGAGTCCACAGCTGCACGGAGCCACGGGTCCAAAACGAATTCTCCACTGAGCTGTTCTGGAAGATCTaGCTGCAGATATTGCACTGG +
Preference number: 5 (lower is better)
Translates to: TRVHSCTEPRVQNEFSTELFWKI*LQILHW
Trigger: CCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAG...CTCAGTGGAGAATTCGTTTTGGACCCGTGGCTCCGTGCAGCTGTGGACTCGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTCATCTGTCCTGCAGTaGTGGAACTCCAGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLSSVLQ*WNSSAL
Trigger: GAGCGCGCTGGAGTTCCACAACTGCAGGACAGATGA...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATCGCCGTGCTTCTTCTaGTGCTTGGAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGSPCFF*CLERLL
Trigger: CAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGWVSRC*FILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPAREEIPI*PINSSL
Trigger: GAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACAGGGGTCACGGTGATGTaGGTTAAGCCGACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTGVTVM*VKPTEL
Trigger: GAGCTCAGTCGGCTTAACCAACATCACCGTGACCCC...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAGATCTGGACGTCATTTaGGCGGTTGTGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARDLDVI*AVVQHG
Trigger: GCCATGTTGCACAACCGCCAAAATGACGTCCAGATC...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATATCCCTCTGCAGTTCTaGCCCCGAGTCTCCCGGAAC +
Preference number: 5 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDIPLQF*PRVSRN
Trigger: GTTCCGGGAGACTCGGGGCAAGAACTGCAGAGGGAT...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAACCTCACGTGACCCCTaGCACATGATGACCGTGATG +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGTSRDP*HMMTVM
Trigger: CATCACGGTCATCATGTGCAAGGGGTCACGTGAGGT...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCACCTCTCAGTGTTTCTaGTCGTGGGCAGCAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRTSQCF*SWAAGG
Trigger: CCCTCCTGCTGCCCACGACAAGAAACACTGAGAGGT...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACATTAAGACAACCCATTTaGCCTCAGACAGTGACCCTA +
Preference number: 5 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTLRQPI*PQTVTL
Trigger: TAGGGTCACTGTCTGAGGCAAAATGGGTTGTCTTAA...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAATGAGCCTTCCGCCTTaGGATGCCACAAATGGGAAC +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARMSLPP*DATNGN
Trigger: GTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCAT...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GATAAACTCTTCCCTCTGGTGGTCATCCATCAACGCGATGTCCTTGAAGTGGACTTGCAGTCATCCTCGTaGGAGGTGTCGAAGCACACG +
Preference number: 5 (lower is better)
Translates to: DKLFPLVVIHQRDVLEVDLQSSS*EVSKHT
Trigger: CGTGTGCTTCGACACCTCCAACGAGGATGACTGCAA...GTCCACTTCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAACCAGCATCATCCAGTaGCAGTCATCCTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGTSIIQ*QSSSLE
Trigger: CTCCAACGAGGATGACTGCAACTGGATGATGCTGGT...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGCTTTCCCGTGCTTCCCTTCGGCCAAATCCTCCTGCTCCAGAGTCAGCTCAGGTTTTTCTTCTGTTCTTaGGTGGCAACATTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: SFPVLPFGQILLLQSQLRFFFCS*VATFSL
Trigger: GAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAAA...CCTGAGCTGACTCTGGAGCAGGAGGATTTGGCCGAAGGGAAGCACGGGAAAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAACGGCAGGAGAACACCTaGCCACACACCGGGCACCCG +
Preference number: 5 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKRQENT*PHTGHP
Trigger: CGGGTGCCCGGTGTGTGGCAAGGTGTTCTCCTGCCG...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYWVSRC*FILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWEEIPI*PINSSL
Trigger: GAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACTGTGGCCACAAACAGAGTACCAGGAAAGTTAAGAGCAAACTTCTCCCCACACAGGTACTCGCGGACATaGTCGTGCACACGCATGTGC +
Preference number: 5 (lower is better)
Translates to: TVATNRVPGKLRANFSPHRYSRT*SCTRMC
Trigger: GCACATGCGTGTGCACGACAATGTCCGCGAGTACCT...GTGTGGGGAGAAGTTTGCTCTTAACTTTCCTGGTACTCTGTTTGTGGCCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATAGGTACTCGCGGACATaGTCGTGCACACGCATGTGC +
Preference number: 5 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDRYSRT*SCTRMC
Trigger: GCACATGCGTGTGCACGACAATGTCCGCGAGTACCT...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATTGCACTCGTACTCCTaGATGCCCTTGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGLHSYS*MPLCSF
Trigger: GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTTGCCGCTTGCAGTGCTaGAGCATGTTGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASCRLQC*SMLTFC
Trigger: GCAGAAGGTCAACATGCTCAAGCACTGCAAGCGGCA...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCAGCACCTCGGGGTGCTaGCGCCGCATGTGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTSTSGC*RRMCRL
Trigger: GAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCT...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCCTCTGTACTGCGGAATaGGTCTCGTCGCCTACACTG +
Preference number: 5 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLLCTAE*VSSPTL
Trigger: CAGTGTAGGCGACGAGACCAATTCCGCAGTACAGAG...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTGCAGAGAATGGTGTGGTCACATTaGGGTCACCCAGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: TRDSGWASARMDTFGLQRMVWSH*GHPGSP
Trigger: TGGTGACCCTGGGTGACCCAAATGTGACCACACCAT...TCTCTGCAATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACAACGTCATTTTGGCGGTaGTGCAACATGGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTTSFWR*CNMAEP
Trigger: CGGCTCTGCCATGTTGCACAACCGCCAAAATGACGT...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAGAGGAAGGGATGACCTaGCCCTGCTTAACACAAAGG +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGEEGMT*PCLTQR
Trigger: CCTTTGTGTTAAGCAGGGCAAGGTCATCCCTTCCTC...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS GCA 90 bp AAGAACCAGCATAGCCATCATCGTGACATTCCCAGGATCAGGAGGTaGACGGTAGGTGGCCTTGTGGTGGAAACAGGTTTAATTAGAGCC +
Preference number: 5 (lower is better)
Translates to: KNQHSHHRDIPRIRR*TVGGLVVETGLIRA
Trigger: GGCTCTAATTAAACCTGTTTCCACCACAAGGCCACCTACCGTGCACCTCCTGATCCTGGGAATGTCACGATGATGGCTATGCTGGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS-3UTR CAA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCTGGAGGAAGGCTTTaGGCTTGTTCTAAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTPGGRL*ACSKWP
Trigger: GGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATCCTGGAGGAAGGCTTTaGGCTTGTTCTAAGTGGCCC +
Preference number: 5 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDPGGRL*ACSKWP
Trigger: GGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGG...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CGTTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGTCAGCTTTGGACACTTaGGGTTTTCTCCCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: RFFHSGFWLGFSQNGYIWSALDT*GFLPLR
Trigger: TCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTGA...CCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAAGAGGCTGCTCAGCTTaGGACACTTTGGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGRGCSA*DTLGFL
Trigger: GAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTCT...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGAGGATGCCGTGTCTGCTaGAGAGAATTAAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGGCRVC*RELSSS
Trigger: AGAGGAGCTTAATTCTCTCAAGCAGACACGGCATCC...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGACTGTTCTGGAAGATCTaGCTGCAGATATTGCACTGG +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARLFWKI*LQILHW
Trigger: CCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAG...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGTTCTGCTGGCAACATCAGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTATGTACTTCTGCACGTaGGGGTCCGGCAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: CSAGNIRTAPDQLLSHASMYFCT*GSGRFS
Trigger: TGAAAACCTGCCGGACCCCAACGTGCAGAAGTACAT...ACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCTGATGTTGCCAGCAGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCATGTACTTCTGCACGTaGGGGTCCGGCAGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLMYFCT*GSGRFS
Trigger: TGAAAACCTGCCGGACCCCAACGTGCAGAAGTACAT...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCTTGCACTCGTACTCCTaGATGCCCTTGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRLHSYS*MPLCSF
Trigger: GAAGCTGCACAAGGGCATCAAGGAGTACGAGTGCAA...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGACTGCGGTGGCACTCCTaGCACTCGTACTCCTTGATG +
Preference number: 5 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRLRWHS*HSYSLM
Trigger: CATCAAGGAGTACGAGTGCAAGGAGTGCCACCGCAG...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAATCCCCGTGTGCCGCTaGCAGTGCTTGAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRIPVCR*QCLSML
Trigger: CAACATGCTCAAGCACTGCAAGCGGCACACGGGGAT...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCACTGTGTGGATGAGCTaGTGGGTCTCCATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRTVWMS*WVSMVF
Trigger: GAACACCATGGAGACCCACAAGCTCATCCACACAGT...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTAGCACCTCGGGGTGCTaGCGCCGCATGTGTCGGCTC +
Preference number: 5 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLSTSGC*RRMCRL
Trigger: GAGCCGACACATGCGGCGCAAGCACCCCGAGGTGCT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCACGGTCAGGATTGAGTaGTCCAGCTGTAACTGGCGT +
Preference number: 5 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLTVRIE*SSCNWR
Trigger: ACGCCAGTTACAGCTGGACAACTCAATCCTGACCGT...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCAGGACTTACTGCCTaGGTAAGGCATGGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTPGLTA*VRHGVE
Trigger: CTCCACACCATGCCTTACCAAGGCAGTAAGTCCTGG...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCCATGCCGGACACAGCGAGGCGGCACTTGGCACAGAACGTTTTCCTGAGAACAATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 5 (lower is better)
Translates to: PMPDTARRHLAQNVFLRTMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...TGTTCTCAGGAAAACGTTCTGTGCCAAGTGCCGCCTCGCTGTGTCCGGCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GAGCCCTGGTCTCCTGCTGATTCCATGGATGCCTGGAGCACTTGTATCTGGAGAGAAACACATCTCACATaGGAACGTCTTGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: EPWSPADSMDAWSTCIWRETHLT*ERLVIW
Trigger: CCAGATGACAAGACGTTCCAATGTGAGATGTGTTTC...TCTCCAGATACAAGTGCTCCAGGCATCCATGGAATCAGCAGGAGACCAGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422911.6
CDS-3UTR CAA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACATTGTGCTTGGAGAGGTaGCTGTCCTGCAGTTGTGGA +
Preference number: 5 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTLCLER*LSCSCG
Trigger: TCCACAACTGCAGGACAGCAACCTCTCCAAGCACAA...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS-3UTR CAA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCATGCTTCTTCTTGTGCTaGGAGAGGTTGCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPCFFLC*ERLLSC
Trigger: GCAGGACAGCAACCTCTCCAAGCACAAGAAGAAGCA...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS-3UTR CAA 90 bp CTTAAAATCCTGCTTCTCTCTCAGCTTCACTTTCCCGAACCCTGTGTCGGGCGATGCTTCTTCTTGTGCTaGGAGAGGTTGCTGGTAGGT +
Preference number: 5 (lower is better)
Translates to: LKILLLSQLHFPEPCVGRCFFLC*ERLLVG
Trigger: ACCTACCAGCAACCTCTCCAAGCACAAGAAGAAGCA...TCGCCCGACACAGGGTTCGGGAAAGTGAAGCTGAGAGAGAAGCAGGATTTTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449395.6
CDS TCA 90 bp CTTGAGAGGGTGAAGACGAAAAGGCCGGCCCTTAGCGACTCTGATTaGGAGAGTCTGGGAAAGAAAACCCAAGCCTGGTCTTTAGACAAA +
Preference number: 5 (lower is better)
Translates to: LERVKTKRPALSDSD*ESLGKKTQAWSLDK
Trigger: TTTGTCTAAAGACCAGGCTTGGGTTTTCTTTCCCAGACTCTCTCAATCAGAGTCGCTAAGGGCCGGCCTTTTCGTCTTCACCCTCTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS GCA 90 bp CTGCAGACCTCACAGGCAAACTTCTTGTCGCCGTGCTTCTTCTTGTaGTTGGAGAGGTTGCTGTTGGTGGAGAAGAATCTGAAACACATC +
Preference number: 5 (lower is better)
Translates to: LQTSQANFLSPCFFL*LERLLLVEKNLKHI
Trigger: GATGTGTTTCAGATTCTTCTCCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGAGGTCTGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000489661.5
ENST00000491486.5
CDS CCA 90 bp CATCTTCAGCCATCTCTGACACCTTACATTAGTGATTTCAAAATGTaGTCCCTGGACCAGGAACCAGCAGTGCCAGCACTGCTTGGGAAC +
Preference number: 5 (lower is better)
Translates to: HLQPSLTPYISDFKM*SLDQEPAVPALLGN
Trigger: GTTCCCAAGCAGTGCTGGCACTGCTGGTTCCTGGTCCAGGGACCACATTTTGAAATCACTAATGTAAGGTGTCAGAGATGGCTGAAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR CAA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCGATCCGGACTCCGGGTaGCGATCCGCTCCGGAAACT +
Preference number: 5 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTDPDSG*RSAPET
Trigger: AGTTTCCGGAGCGGATCGCAACCCGGAGTCCGGATC...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTACCAGCATCATCCAGTaGCAGTCATCCTCGTTGGAG +
Preference number: 5 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTTSIIQ*QSSSLE
Trigger: CTCCAACGAGGATGACTGCAACTGGATGATGCTGGT...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCATCAGCTTTGGACACTTaGGGTTTTCTCCCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPSALDT*GFLPLR
Trigger: TCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTGA...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTCCCAAGAGGCTGCTCAGCTTaGGACACTTTGGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLLINYSAMPVFPQDGLPRGCSA*DTLGFL
Trigger: GAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTCT...TGGGAGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACGGATGCCGTGTCTGCTaGAGAGAATTAAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYGCRVC*RELSSS
Trigger: AGAGGAGCTTAATTCTCTCAAGCAGACACGGCATCC...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTTACTGCCTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCGGATGCCGTGTCTGCTaGAGAGAATTAAGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RTYCLGKAWCGAPSSLKLGCRVC*RELSSS
Trigger: AGAGGAGCTTAATTCTCTCAAGCAGACACGGCATCC...GAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAGGCAGTAAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTGCTCCCCGAGCTGTTaGATGAGCTTGCGCCGGATG +
Preference number: 5 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANCSPSC*MSLRRM
Trigger: CATCCGGCGCAAGCTCATCAAACAGCTCGGGGAGCA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATTGTGCTTGGAGAGGTaGCTGTTGGTGGAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGLCLER*LLVEKN
Trigger: ATTCTTCTCCACCAACAGCAACCTCTCCAAGCACAA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000422911.6
CDS-3UTR CAA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGATCGCCGTGCTTCTTCTaGTGCTTGGAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRSPCFF*CLERLL
Trigger: CAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGA...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTTGGCGCAGCGCGTGCTaGGTCTTCATGCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: TWLFTAHSVLGAINASISWRSAC*VFMPFP
Trigger: TGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCA...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGACAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTG +
Preference number: 5 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRQCLSM*TFCANL
Trigger: CAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGGATCTGGACGTCATTTaGGCGGTTGTGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: FQPCPQKSAVWSEVLRKLDLDVI*AVVQHG
Trigger: GCCATGTTGCACAACCGCCAAAATGACGTCCAGATC...CAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAACCAGGGTCGTCAGGTaGATGAAATGGGCCACAGAC +
Preference number: 5 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRTRVVR*MKWATD
Trigger: GTCTGTGGCCCATTTCATCAACCTGACGACCCTGGT...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAAGGGGCGTGATGGAGTaGACCAGGGTCGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRRGVME*TRVVRL
Trigger: CAACCTGACGACCCTGGTCAACTCCATCACGCCCCT...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTGAGGAAGGGATGACCTaGCCCTGCTTAACACAAAGG +
Preference number: 5 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTEEGMT*PCLTQR
Trigger: CCTTTGTGTTAAGCAGGGCAAGGTCATCCCTTCCTC...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATGAGGAAGGGATGACCTaGCCCTGCTTAACACAAAGG +
Preference number: 5 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDEEGMT*PCLTQR
Trigger: CCTTTGTGTTAAGCAGGGCAAGGTCATCCCTTCCTC...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GATGCCACAAATGGGAACGATAGAGGTACAGGAGGTCTGCCTTCCACGCCGGACATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 5 (lower is better)
Translates to: DATNGNDRGTGGLPSTPDMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...GTCCGGCGTGGAAGGCAGACCTCCTGTACCTCTATCGTTCCCATTTGTGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACGCTAGAGCATTCCAGAGGCCCGAGCCCCTTCTCAACCCACAGACCAGGATTCGAAGTGCTGAGAAAGTaGCGTTTTGAAAAACACAAT +
Preference number: 5 (lower is better)
Translates to: TLEHSRGPSPFSTHRPGFEVLRK*RFEKHN
Trigger: ATTGTGTTTTTCAAAACGCAACTTTCTCAGCACTTC...GAATCCTGGTCTGTGGGTTGAGAAGGGGCTCGGGCCTCTGGAATGCTCTAGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTCGAAGGTTGCAGGATCAGGTGCGGCTCAGCACGCCTCATGGTTTCAGCCCATCAAGCCCGAATTCATTaGATGAGACTACTATGTATA +
Preference number: 5 (lower is better)
Translates to: LEGCRIRCGSARLMVSAHQARIH*MRLLCI
Trigger: TATACATAGTAGTCTCATCAAATGAATTCGGGCTTG...ATGGGCTGAAACCATGAGGCGTGCTGAGCCGCACCTGATCCTGCAACCTTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTAGCTGCTGCCTCGCTTaGGCTGCCTGGAGGAAGGCT +
Preference number: 5 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLSCCLA*AAWRKA
Trigger: AGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GACACCTTAAGGCAGGTTTGTCCTCTCACTGTGGCCACAAACAGAGTACCAGGATGCTTTAGGCTCTCTTaGCGGCTGAACAATTTTGCA +
Preference number: 5 (lower is better)
Translates to: DTLRQVCPLTVATNRVPGCFRLS*RLNNFA
Trigger: TGCAAAATTGTTCAGCCGCAAAGAGAGCCTAAAGCA...TCCTGGTACTCTGTTTGTGGCCACAGTGAGAGGACAAACCTGCCTTAAGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTTGTGCTTGGAGAGGTaGCTGTTGGTGGAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYLCLER*LLVEKN
Trigger: ATTCTTCTCCACCAACAGCAACCTCTCCAAGCACAA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR CAA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAGGTGCTTGTTCATATaGCTCCGGCAGGAGAACACC +
Preference number: 5 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRRCLFI*LRQENT
Trigger: GGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCT...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GTTGGGAGTCTCTGCGAGGTCATTTGCCCTTTAGATTCTGCAAAGGCAAAAAGAAGGTGCTTGTTCATATaGCTCCGGCAGGAGAACACC +
Preference number: 5 (lower is better)
Translates to: VGSLCEVICPLDSAKAKRRCLFI*LRQENT
Trigger: GGTGTTCTCCTGCCGGAGCAATATGAACAAGCACCT...TCTTTTTGCCTTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGACTCCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGGACTGCTCCTGATCAATTACTCAGCCATGCCAGTGTTTCCTCAAGATGGACTATCAACGCGATGTCCTaGAAGTGGACATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: RTAPDQLLSHASVSSRWTINAMS*KWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGTTGAT...AGTCCATCTTGAGGAAACACTGGCATGGCTGAGTAATTGATCAGGAGCAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAATGGCGCAGCGCGTGCTaGGTCTTCATGCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKWRSAC*VFMPFP
Trigger: TGGGAAAGGCATGAAGACCAAGCACGCGCTGCGCCA...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAACGGTCAGGATTGAGTaGTCCAGCTGTAACTGGCGT +
Preference number: 5 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRTVRIE*SSCNWR
Trigger: ACGCCAGTTACAGCTGGACAACTCAATCCTGACCGT...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GAATTGTCATCGTTTTCTTCCGAGGAGATCCCGATCTTGCCGATAAACTCTTCCGGATGCCTGGAGCACTaGTATCTGGAGAATGGAGAC +
Preference number: 5 (lower is better)
Translates to: ELSSFSSEEIPILPINSSGCLEH*YLENGD
Trigger: GTCTCCATTCTCCAGATACAAGTGCTCCAGGCATCC...GGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTGCCTGCTGCCACCTGTGAATACTGTCTGTGTTCTCATAGGAACCGAGCTCTATCACATTGGAACGTCTaGTCATCTGGTAGGTCTCTA +
Preference number: 5 (lower is better)
Translates to: LPAATCEYCLCSHRNRALSHWNV*SSGRSL
Trigger: TAGAGACCTACCAGATGACAAGACGTTCCAATGTGA...TAGAGCTCGGTTCCTATGAGAACACAGACAGTATTCACAGGTGGCAGCAGGCAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422911.6
CDS TCA 90 bp CACGCTGAGACACAACTCCACCACTCAGGGACAACCTCTCAATTCTaGTGTCTCAATTTTCTCTCCACAAGCACAAAAACACTCGCCCAT +
Preference number: 5 (lower is better)
Translates to: HAETQLHHSGTTSQF*CLNFLSTSTKTLAH
Trigger: ATGGGCGAGTGTTTTTGTGCTTGTGGAGAGAAAATTGAGACATCAGAATTGAGAGGTTGTCCCTGAGTGGTGGAGTTGTGTCTCAGCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS-3UTR CAA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACTGCTCCCCGAGCTGTTaGATGAGCTTGCGCCGGATG +
Preference number: 5 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYCSPSC*MSLRRM
Trigger: CATCCGGCGCAAGCTCATCAAACAGCTCGGGGAGCA...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTCACATTGGAACGTCTaGTCATCTGTCCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDSHWNV*SSVLQL
Trigger: CAACTGCAGGACAGATGACAAGACGTTCCAATGTGA...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CAA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTTGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: TWLFTAHSVLGAINASISWVSRC*FILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCA...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAGCGCTCTCGTCAGAATaGTCATCGTTTTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRALSSE*SSFSSE
Trigger: CTCGGAAGAAAACGATGACAATTCTGACGAGAGCGC...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAAAGGTTCCCGATGCTGTaGAAGATCCGCCCGCAGATC +
Preference number: 5 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKRFPML*KIRPQI
Trigger: GATCTGCGGGCGGATCTTCAACAGCATCGGGAACCT...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTCGGTCACGTACTTCTaGTCGCACACGGAGCACGTC +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISSVTYF*SHTEHV
Trigger: GACGTGCTCCGTGTGCGACAAGAAGTACGTGACCGA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTATGGTGTGGTCACATTaGGGTCACCCAGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: TWLFTAHSVLGAINASISMVWSH*GHPGSP
Trigger: TGGTGACCCTGGGTGACCCAAATGTGACCACACCAT...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACCCAGGACTTACTGCCTaGGTAAGGCATGGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANPGLTA*VRHGVE
Trigger: CTCCACACCATGCCTTACCAAGGCAGTAAGTCCTGG...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACCAGGACTTACTGCCTaGGTAAGGCATGGTGTGGAG +
Preference number: 5 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRPGLTA*VRHGVE
Trigger: CTCCACACCATGCCTTACCAAGGCAGTAAGTCCTGG...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGGTAAGGCATGGTGTGGAGCCCCATCCAGTTTAAAACTCTGGCCTGCCAGAATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 5 (lower is better)
Translates to: LGKAWCGAPSSLKLWPARMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...TCTGGCAGGCCAGAGTTTTAAACTGGATGGGGCTCCACACCATGCCTTACCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AATGGTTGCTGGCGGGGGATCTGGAGATACTCTGCAAAGCTAAGTCAACCTTACTTAAGACAACCCATTTaGCCTCAGACAGTGACCCTA +
Preference number: 5 (lower is better)
Translates to: NGCWRGIWRYSAKLSQPYLRQPI*PQTVTL
Trigger: TAGGGTCACTGTCTGAGGCAAAATGGGTTGTCTTAA...GTAAGGTTGACTTAGCTTTGCAGAGTATCTCCAGATCCCCCGCCAGCAACCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS TCA 90 bp ACACCAGATGAACATGATCTCTTCGCTCCCATCTTCAGCCATCTCTaGCACCTTACATTAGTGATTTCAAAATGTGGTCCCTGGACCAGG +
Preference number: 5 (lower is better)
Translates to: TPDEHDLFAPIFSHL*HLTLVISKCGPWTR
Trigger: CCTGGTCCAGGGACCACATTTTGAAATCACTAATGTAAGGTGTCAGAGATGGCTGAAGATGGGAGCGAAGAGATCATGTTCATCTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS-3UTR CAA 90 bp CTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGACGCCGCTTTTTCTTCTGTTCTTaGGTGGCAACATTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: LQTVLMPFTIQWESPRRRFFFCS*VATFSL
Trigger: GAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAAA...GCGGCGTCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTAGCTGTTTGATGAGCTaGCGCCGGATGCCGTGTCTG +
Preference number: 5 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLSCLMS*RRMPCL
Trigger: CAGACACGGCATCCGGCGCAAGCTCATCAAACAGCT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTTGCTCCCCGAGCTGTTaGATGAGCTTGCGCCGGATG +
Preference number: 5 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQICSPSC*MSLRRM
Trigger: CATCCGGCGCAAGCTCATCAAACAGCTCGGGGAGCA...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCCAGTGCTTGAGCATGTaGACCTTCTGCGCGAACCTG +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISQCLSM*TFCANL
Trigger: CAGGTTCGCGCAGAAGGTCAACATGCTCAAGCACTG...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACACTGTGTGGATGAGCTaGTGGGTCTCCATGGTGTTC +
Preference number: 5 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANTVWMS*WVSMVF
Trigger: GAACACCATGGAGACCCACAAGCTCATCCACACAGT...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGAGCACGTCCACTGCTaGCCCACTGTGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKEHVHC*PTVWMS
Trigger: GCTCATCCACACAGTGGGCAAGCAGTGGACGTGCTC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACGATCTGGACGTCATTTaGGCGGTTGTGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANDLDVI*AVVQHG
Trigger: GCCATGTTGCACAACCGCCAAAATGACGTCCAGATC...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTCGTCTGATCTCCAAGTaGGGAGGAAGGGATGACCTT +
Preference number: 5 (lower is better)
Translates to: TWLFTAHSVLGAINASISRLISK*GGRDDL
Trigger: AAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACG...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TTTCTTCCACTCGGGATTCTGGCTGGGCTTCAGCCAGAATGGATACATTTGGATTCTCTGCGAGGTCATTaGCCCTTTAGATTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: FLPLGILAGLQPEWIHLDSLRGH*PFRFCK
Trigger: TTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGA...ATCCAAATGTATCCATTCTGGCTGAAGCCCAGCCAGAATCCCGAGTGGAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATGAGCCTTCCGCCTTaGGATGCCACAAATGGGAAC +
Preference number: 5 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANMSLPP*DATNGN
Trigger: GTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCAT...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAATTGCAGTCATCCTCGTaGGAGGTGTCGAAGCACACG +
Preference number: 5 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWELQSSS*EVSKHT
Trigger: CGTGTGCTTCGACACCTCCAACGAGGATGACTGCAA...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAAGAGGCTGCTCAGCTTaGGACACTTTGGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRRGCSA*DTLGFL
Trigger: GAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTCT...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATGCTCTGTGGGTTCCTaGTCTTCCACGATGACTAGA +
Preference number: 5 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRCSVGS*SSTMTR
Trigger: TCTAGTCATCGTGGAAGACAAGGAACCCACAGAGCA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CAGCACCTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACTGCTCTGTGGGTTCCTaGTCTTCCACGATGACTAGA +
Preference number: 5 (lower is better)
Translates to: QHLLFVIIQPDVTGNTANCSVGS*SSTMTR
Trigger: TCTAGTCATCGTGGAAGACAAGGAACCCACAGAGCA...GTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAGGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAAGCTGTTTGATGAGCTaGCGCCGGATGCCGTGTCTG +
Preference number: 5 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKSCLMS*RRMPCL
Trigger: CAGACACGGCATCCGGCGCAAGCTCATCAAACAGCT...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TGCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACTCGCACTTAAACAGCTaGTCACCATGCGAGCGCACG +
Preference number: 5 (lower is better)
Translates to: CFHYHLAGNSIFSVFQKYSHLNS*SPCERT
Trigger: CGTGCGCTCGCATGGTGACAAGCTGTTTAAGTGCGA...GTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTGGGTGAGCAGGTGCTaGTTCATATTGCTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: TAHSVLGAINASISELTSWVSRC*FILLRQ
Trigger: CTGCCGGAGCAATATGAACAAGCACCTGCTCACCCA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGAGCGCTCTCGTCAGAATaGTCATCGTTTTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRALSSE*SSFSSE
Trigger: CTCGGAAGAAAACGATGACAATTCTGACGAGAGCGC...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAAGGTTCCCGATGCTGTaGAAGATCCGCCCGCAGATC +
Preference number: 5 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLRFPML*KIRPQI
Trigger: GATCTGCGGGCGGATCTTCAACAGCATCGGGAACCT...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTATCCCCGTGTGCCGCTaGCAGTGCTTGAGCATGTTG +
Preference number: 5 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIIPVCR*QCLSML
Trigger: CAACATGCTCAAGCACTGCAAGCGGCACACGGGGAT...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAATGGTGTGGTCACATTaGGGTCACCCAGGGTCACCA +
Preference number: 5 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEMVWSH*GHPGSP
Trigger: TGGTGACCCTGGGTGACCCAAATGTGACCACACCAT...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAAGGGGTCACGGTGATGTaGGTTAAGCCGACTGAGCTC +
Preference number: 5 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKGVTVM*VKPTEL
Trigger: GAGCTCAGTCGGCTTAACCAACATCACCGTGACCCC...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCGAGGAAGGGATGACCTaGCCCTGCTTAACACAAAGG +
Preference number: 5 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTEEGMT*PCLTQR
Trigger: CCTTTGTGTTAAGCAGGGCAAGGTCATCCCTTCCTC...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTGTGGGTCTCCATGGTGTTCCTCTCGCTGAATGTCTTCCCACACAATTCACAATGGATACATTTGGATaGCAGAGAATCCTGAGACAA +
Preference number: 5 (lower is better)
Translates to: LVGLHGVPLAECLPTQFTMDTFG*QRILRQ
Trigger: TTGTCTCAGGATTCTCTGCAATCCAAATGTATCCAT...TGTGAATTGTGTGGGAAGACATTCAGCGAGAGGAACACCATGGAGACCCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GAATTGTCATCGTTTTCTTCCGAGGAGATCCCGATCTTGCCGATAAACTCTTCCTCTCTGCGAGGTCATTaGCCCTTTAGATTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: ELSSFSSEEIPILPINSSSLRGH*PFRFCK
Trigger: TTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGA...GGAAGAGTTTATCGGCAAGATCGGGATCTCCTCGGAAGAAAACGATGACAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCATGAGCCTTCCGCCTTaGGATGCCACAAATGGGAAC +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISMSLPP*DATNGN
Trigger: GTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCAT...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AACAAATTCCAGCCCTGTCCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGATTTTTCTTCTGTTCTTaGGTGGCAACATTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: NKFQPCPQKSAVWSEVLRFFFCS*VATFSL
Trigger: GAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAAA...TCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGGACAGGGCTGGAATTTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCAGAGGCTGCTCAGCTTaGGACACTTTGGGTTTTCTC +
Preference number: 5 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTRGCSA*DTLGFL
Trigger: GAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTCT...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTGCTCTGTGGGTTCCTaGTCTTCCACGATGACTAGA +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISCSVGS*SSTMTR
Trigger: TCTAGTCATCGTGGAAGACAAGGAACCCACAGAGCA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTATCGCACTTAAACAGCTaGTCACCATGCGAGCGCACG +
Preference number: 5 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLSHLNS*SPCERT
Trigger: CGTGCGCTCGCATGGTGACAAGCTGTTTAAGTGCGA...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp GCTTTCATTACCACCTGGCAGGAAATAGCATTTTCTCTGTGTTTCAGAAATACCTCACAGGCAAACTTCTaGTCGCCGTGCTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: AFITTWQEIAFSLCFRNTSQANF*SPCFFL
Trigger: CAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGA...GGTATTTCTGAAACACAGAGAAAATGCTATTTCCTGCCAGGTGGTAATGAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCATCAACGCGATGTCCTaGAAGTGGACATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISINAMS*KWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGTTGAT...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTGCAAAACTCTGTACTGCGGAATaGGTCTCGTCGCCTACACTG +
Preference number: 5 (lower is better)
Translates to: PSSKRIHVTLTSMCSLAKLCTAE*VSSPTL
Trigger: CAGTGTAGGCGACGAGACCAATTCCGCAGTACAGAG...TTTTGCAAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTATGAGCCTTCCGCCTTaGGATGCCACAAATGGGAAC +
Preference number: 5 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLMSLPP*DATNGN
Trigger: GTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCAT...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAATGAGCCTTCCGCCTTaGGATGCCACAAATGGGAAC +
Preference number: 5 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEMSLPP*DATNGN
Trigger: GTTCCCATTTGTGGCATCCAAAGGCGGAAGGCTCAT...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp ACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAACTAACCTCTTCAGCTTTGGACACTTaGGGTTTTCTCCCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: TAHSVLGAINASISELTSSALDT*GFLPLR
Trigger: TCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTGA...AGAGGTTAGTTCACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp TCCACTCCTAGTTCAAAGAGAATACACGTTACTTTAACTTCTATGTGCTCGCTTTCAGCTTTGGACACTTaGGGTTTTCTCCCCCTTCGA +
Preference number: 5 (lower is better)
Translates to: STPSSKRIHVTLTSMCSLSALDT*GFLPLR
Trigger: TCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTGA...AAGCGAGCACATAGAAGTTAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTTGTGCTTGGAGAGGTaGCTGTTGGTGGAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISLCLER*LLVEKN
Trigger: ATTCTTCTCCACCAACAGCAACCTCTCCAAGCACAA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
CDS-3UTR CAA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTGAGGAGATCCCGATCTaGCCGATAAACTCTTCCCTC +
Preference number: 5 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIEEIPI*PINSSL
Trigger: GAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTGGGTGGTACATGGTTGTTGTATTTTGCTATCTAGTTTCTTTGATGCAAATTCGTCTGATCTCCAAGTaGGGAGGAAGGGATGACCTT +
Preference number: 5 (lower is better)
Translates to: PGWYMVVVFCYLVSLMQIRLISK*GGRDDL
Trigger: AAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACG...AATTTGCATCAAAGAAACTAGATAGCAAAATACAACAACCATGTACCACCCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAAGCCCAAGATTAAGACAACCCATTTaGCCTCAGACAGTGACCCTA +
Preference number: 5 (lower is better)
Translates to: QHLQTVLMPFTIQWESPRLRQPI*PQTVTL
Trigger: TAGGGTCACTGTCTGAGGCAAAATGGGTTGTCTTAA...TCTTGGGCTTTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCTGCTTTAGGCTCTCTTaGCGGCTGAACAATTTTGCA +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISCFRLS*RLNNFA
Trigger: TGCAAAATTGTTCAGCCGCAAAGAGAGCCTAAAGCA...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAATGCTTTAGGCTCTCTTaGCGGCTGAACAATTTTGCA +
Preference number: 5 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKCFRLS*RLNNFA
Trigger: TGCAAAATTGTTCAGCCGCAAAGAGAGCCTAAAGCA...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTGAAACACATCTCACATaGGAACGTCTTGTCATCTGT +
Preference number: 5 (lower is better)
Translates to: TWLFTAHSVLGAINASISETHLT*ERLVIC
Trigger: ACAGATGACAAGACGTTCCAATGTGAGATGTGTTTC...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398548.6
CDS-3UTR CAA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAATTTTTCTTCTGTTCTTaGGTGGCAACATTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEFFFCS*VATFSL
Trigger: GAGCGAGAATGTTGCCACCAAAGAACAGAAGAAAAA...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS-3UTR CAA 90 bp AAATACAGCCAACATCTCCAAACAGTCTTAATGCCTTTCACAATCCAATGGGAAGAAACACATCTCACATaGGAACGTCTTGTCATCTGT +
Preference number: 5 (lower is better)
Translates to: KYSQHLQTVLMPFTIQWEETHLT*ERLVIC
Trigger: ACAGATGACAAGACGTTCCAATGTGAGATGTGTTTC...TTCCCATTGGATTGTGAAAGGCATTAAGACTGTTTGGAGATGTTGGCTGTATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000398548.6
ENST00000447016.6
CDS-3UTR CAA 90 bp ACCTGGCTGTTCACCGCACATTCAGTTTTAGGGGCAATTAATGCTTCTATTAGTCAAGCCCGAATTCATTaGATGAGACTACTATGTATA +
Preference number: 5 (lower is better)
Translates to: TWLFTAHSVLGAINASISQARIH*MRLLCI
Trigger: TATACATAGTAGTCTCATCAAATGAATTCGGGCTTG...ACTAATAGAAGCATTAATTGCCCCTAAAACTGAATGTGCGGTGAACAGCCAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTATCTCTGCGAGGTCATTaGCCCTTTAGATTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLSLRGH*PFRFCK
Trigger: TTTGCAGAATCTAAAGGGCAAATGACCTCGCAGAGA...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CCTCAAAAGTCTGCTGTTTGGAGTGAAGTGCTGAGAAAGTTGCGTTTTGAAAAAGAAGTGCTGAGAAAGTaGCGTTTTGAAAAACACAAT +
Preference number: 5 (lower is better)
Translates to: PQKSAVWSEVLRKLRFEKEVLRK*RFEKHN
Trigger: ATTGTGTTTTTCAAAACGCAACTTTCTCAGCACTTC...TTTTTCAAAACGCAACTTTCTCAGCACTTCACTCCAAACAGCAGACTTTTGAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCGAAGTGCTGAGAAAGTaGCGTTTTGAAAAACACAAT +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISEVLRK*RFEKHN
Trigger: ATTGTGTTTTTCAAAACGCAACTTTCTCAGCACTTC...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp CTTTTATTCGTCATCATACAACCTGATGTGACAGGAAATACAGCCAACATCTCCCAAGCCCGAATTCATTaGATGAGACTACTATGTATA +
Preference number: 5 (lower is better)
Translates to: LLFVIIQPDVTGNTANISQARIH*MRLLCI
Trigger: TATACATAGTAGTCTCATCAAATGAATTCGGGCTTG...GGAGATGTTGGCTGTATTTCCTGTCACATCAGGTTGTATGATGACGAATAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS-3UTR CAA 90 bp AGTTGTATAAGAACCGACTCCACTCCTAGTTCAAAGAGAATACACGTTACTTTACAAGCCCGAATTCATTaGATGAGACTACTATGTATA +
Preference number: 5 (lower is better)
Translates to: SCIRTDSTPSSKRIHVTLQARIH*MRLLCI
Trigger: TATACATAGTAGTCTCATCAAATGAATTCGGGCTTG...TAAAGTAACGTGTATTCTCTTTGAACTAGGAGTGGAGTCGGTTCTTATACAACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS CCA 72 bp GGGCTGTACCCGAGGGCGGGGGATAACGACATCCCCTaGGGCCTCGGCGACGACGCCGCCCGGCGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: GLYPRAGDNDIP*GLGDDAARRRG
Trigger: CCCCCGCCGCCGGGCGGCGTCGTCGCCGAGGCCCCAGGGGATGTCGTTATCCCCCGCCCTCGGGTACAGCCC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp CAGCAGGCACTCAGACAGCCCCGGCAGCCTGCCGCGTaGGCCCCGAAGGCTCCTTCAGGCTGCGCCGCTCAC +
Preference number: 6 (lower is better)
Translates to: QQALRQPRQPAA*APKAPSGCAAH
Trigger: GTGAGCGGCGCAGCCTGAAGGAGCCTTCGGGGCGCACGCGGCAGGCTGCCGGGGCTGTCTGAGTGCCTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CCA 72 bp CATGGCGGCTGGACCGGGGCGGCGCGCGGCTGCCTTTaGAATGTGCAGAGCGGGATCGGATCCGGACTCCGG +
Preference number: 6 (lower is better)
Translates to: HGGWTGAARGCL*NVQSGIGSGLR
Trigger: CCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CAA 72 bp GCATGGCGGCTGGACCGGGGCGGCGCGCGGCTGCCTTaGGAATGTGCAGAGCGGGATCGGATCCGGACTCCG +
Preference number: 6 (lower is better)
Translates to: AWRLDRGGARLP*ECAERDRIRTP
Trigger: CGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp GCTGGACCGGGGCGGCGCGCGGCTGCCTTTGGAATGTaGAGAGCGGGATCGGATCCGGACTCCGGGTTGCGA +
Preference number: 6 (lower is better)
Translates to: AGPGRRAAAFGM*RAGSDPDSGLR
Trigger: TCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGCCGCGCGCCGCCCCGGTCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 72 bp GGCTGGCACGCCCGGCCAACCCAAAGCAGACCCGTGTaGCAACCCGCGCCACTCTGGGGAGCAGGGGAGGAA +
Preference number: 6 (lower is better)
Translates to: GWHARPTQSRPV*QPAPLWGAGEE
Trigger: TTCCTCCCCTGCTCCCCAGAGTGGCGCGGGTTGCCACACGGGTCTGCTTTGGGTTGGCCGGGCGTGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 90 bp GAACAGTCGGCATGGCGGCTGGACCGGGGCGGCGCGCGGCTGCCTTaGGAATGTGCAGAGCGGGATCGGATCCGGACTCCGGGTTGCGAT +
Preference number: 6 (lower is better)
Translates to: EQSAWRLDRGGARLP*ECAERDRIRTPGCD
Trigger: ATCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCCAAAGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCCGACTGTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 72 bp CCCGCAGCCGGCGAATGTAACAAAGAACAGTCGGCATaGCGGCTGGACCGGGGCGGCGCGCGGCTGCCTTTG +
Preference number: 6 (lower is better)
Translates to: PAAGECNKEQSA*RLDRGGARLPL
Trigger: CAAAGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCCGACTGTTCTTTGTTACATTCGCCGGCTGCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CAA 72 bp CGATCCCGGAGCGGCTCCGGGAAATCCAGCCGGGTTTaGACTCCGATCGCCAACGGTGCCCGCAGCCGGCGA +
Preference number: 6 (lower is better)
Translates to: RSRSGSGKSSRV*TPIANGARSRR
Trigger: TCGCCGGCTGCGGGCACCGTTGGCGATCGGAGTCAAAACCCGGCTGGATTTCCCGGAGCCGCTCCGGGATCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS TCA 72 bp GATCCCGGAGCGGCTCCGGGAAATCCAGCCGGGTTTTaGCTCCGATCGCCAACGGTGCCCGCAGCCGGCGAA +
Preference number: 6 (lower is better)
Translates to: DPGAAPGNPAGF*LRSPTVPAAGE
Trigger: TTCGCCGGCTGCGGGCACCGTTGGCGATCGGAGTCAAAACCCGGCTGGATTTCCCGGAGCCGCTCCGGGATC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp GGGCAGCTGCTGCCCACTGAGCCGCCTCACCAGGCCTaGAGGGACTGCTTCTGGAAGCTGCTGTGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: GQLLPTEPPHQA*RDCFWKLLWVS
Trigger: GCTGACCCACAGCAGCTTCCAGAAGCAGTCCCTGCAGGCCTGGTGAGGCGGCTCAGTGGGCAGCAGCTGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp GCCCTGAGGAACGGCCACCGCCTTGGGAACAGCCACTaGCCTAGGGAACGGCCACTGTGGGGGATGATCGCC +
Preference number: 6 (lower is better)
Translates to: ALRNGHRLGNSH*PRERPLWGMIA
Trigger: GGCGATCATCCCCCACAGTGGCCGTTCCCTAGGGCAGTGGCTGTTCCCAAGGCGGTGGCCGTTCCTCAGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS GCA 72 bp CTGCCCACTGAGCCGCCTCACCAGGCCTGCAGGGACTaGTTCTGGAAGCTGCTGTGGGTCAGCCCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: LPTEPPHQACRD*FWKLLWVSPVP
Trigger: AGGGACAGGGCTGACCCACAGCAGCTTCCAGAAGCAGTCCCTGCAGGCCTGGTGAGGCGGCTCAGTGGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp GGTCACGTCAGGCAGCGGCCAGGGCAGCCCCAGCACTaGCCTGGACACACTCTCCAATCAGTGGGGACGCTT +
Preference number: 6 (lower is better)
Translates to: GHVRQRPGQPQH*PGHTLQSVGTL
Trigger: AAGCGTCCCCACTGATTGGAGAGTGTGTCCAGGGCAGTGCTGGGGCTGCCCTGGCCGCTGCCTGACGTGACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465955.1
CDS CAA 90 bp TTCTGGTGCTCGGCCTCCGCCGCTGGCCGCACCAGCATCATCCAGTaGCAGTCATCCTCGTTGGAGGTGTCGAAGCACACGGGGTGCCCG +
Preference number: 6 (lower is better)
Translates to: FWCSASAAGRTSIIQ*QSSSLEVSKHTGCP
Trigger: CGGGCACCCCGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGAGCACCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 72 bp GAATGTGCAGAGCGGGATCGGATCCGGACTCCGGGTTaGGATCCGCTCCGGAAACTGCGCAGCACCGGAAGC +
Preference number: 6 (lower is better)
Translates to: ECAERDRIRTPG*DPLRKLRSTGS
Trigger: GCTTCCGGTGCTGCGCAGTTTCCGGAGCGGATCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269844.5
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS GCA 72 bp CGGCCTCCGCCGCTGGCCGCACCAGCATCATCCAGTTaGAGTCATCCTCGTTGGAGGTGTCGAAGCACACGG +
Preference number: 6 (lower is better)
Translates to: RPPPLAAPASSS*SHPRWRCRSTR
Trigger: CCGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 72 bp CCCAGGTTGGAGTGCAGCGGCGCGATCTCGGCTCACTaGAAGCTCCGCTTCCCGGGTTCAGGCCATTCTCCT +
Preference number: 6 (lower is better)
Translates to: PRLECSGAISAH*KLRFPGSGHSP
Trigger: AGGAGAATGGCCTGAACCCGGGAAGCGGAGCTTGCAGTGAGCCGAGATCGCGCCGCTGCACTCCAACCTGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CCA 72 bp CCGGCGAATGTAACAAAGAACAGTCGGCATGGCGGCTaGACCGGGGCGGCGCGCGGCTGCCTTTGGAATGTG +
Preference number: 6 (lower is better)
Translates to: PANVTKNSRHGG*TGAARGCLWNV
Trigger: CACATTCCAAAGGCAGCCGCGCGCCGCCCCGGTCCAGCCGCCATGCCGACTGTTCTTTGTTACATTCGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 72 bp GCATCCCCTGCCCCGCCTGGGTGTGCACGTGTCCGCTaGCAGGCCAAGACCTTGCCCTGCTTAACACAAAGG +
Preference number: 6 (lower is better)
Translates to: ASPAPPGCARVR*QAKTLPCLTQR
Trigger: CCTTTGTGTTAAGCAGGGCAAGGTCTTGGCCTGCCAGCGGACACGTGCACACCCAGGCGGGGCAGGGGATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 72 bp GTAGGCCGTCAGGTTCTGGTGCTCGGCCTCCGCCGCTaGCCGCACCAGCATCATCCAGTTGCAGTCATCCTC +
Preference number: 6 (lower is better)
Translates to: VGRQVLVLGLRR*PHQHHPVAVIL
Trigger: GAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGAGCACCAGAACCTGACGGCCTAC
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CCA 72 bp GACAGTACACTTCTGCAGTCCAGGGGCAGAGGAGGCTaGCACGCCCGGCCAACCCAAAGCAGACCCGTGTGG +
Preference number: 6 (lower is better)
Translates to: DSTLLQSRGRGG*HARPTQSRPVW
Trigger: CCACACGGGTCTGCTTTGGGTTGGCCGGGCGTGCCAGCCTCCTCTGCCCCTGGACTGCAGAAGTGTACTGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 72 bp GGAATGTGCAGAGCGGGATCGGATCCGGACTCCGGGTaGCGATCCGCTCCGGAAACTGCGCAGCACCGGAAG +
Preference number: 6 (lower is better)
Translates to: GMCRAGSDPDSG*RSAPETAQHRK
Trigger: CTTCCGGTGCTGCGCAGTTTCCGGAGCGGATCGCAACCCGGAGTCCGGATCCGATCCCGCTCTGCACATTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269844.5
ENST00000422911.6
ENST00000441787.5
ENST00000449395.6
CDS GCA 72 bp CCAGCGCGCTCTCGATGCGGAAGGTCTTCTCACAAGTaGCGCAGCGGTACCTGTACTCGCCGTCCACCTCGT +
Preference number: 6 (lower is better)
Translates to: PARSRCGRSSHK*RSGTCTRRPPR
Trigger: ACGAGGTGGACGGCGAGTACAGGTACCGCTGCGGCACTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000496124.1
CDS CCA 72 bp CACAGCCCAGCGAGTTGGTGGGCGGCAGGCAGAGTGTaGGGTGTTCTGAGAACCCAGATGAGGGCATGTGGC +
Preference number: 6 (lower is better)
Translates to: HSPASWWAAGRV*GVLRTQMRACG
Trigger: GCCACATGCCCTCATCTGGGTTCTCAGAACACCCCACACTCTGCCTGCCGCCCACCAACTCGCTGGGCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 72 bp TCGGCCTCCGCCGCTGGCCGCACCAGCATCATCCAGTaGCAGTCATCCTCGTTGGAGGTGTCGAAGCACACG +
Preference number: 6 (lower is better)
Translates to: SASAAGRTSIIQ*QSSSLEVSKHT
Trigger: CGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGGCGGAGGCCGA
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CAA 90 bp TCCGCCGCTGGCCGCACCAGCATCATCCAGTTGCAGTCATCCTCGTaGGAGGTGTCGAAGCACACGGGGTGCCCGTCCTTCTGGAACACC +
Preference number: 6 (lower is better)
Translates to: SAAGRTSIIQLQSSS*EVSKHTGCPSFWNT
Trigger: GGTGTTCCAGAAGGACGGGCACCCCGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCCAGCGGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CAA 90 bp AGCCCCAGCACTGCCCTGGACACACTCTCCAATCAGTGGGGACGCTaGTGGGCCACCGAGCTGCCACAAGAAACAGTGACCACAGCTGGG +
Preference number: 6 (lower is better)
Translates to: SPSTALDTLSNQWGR*WATELPQETVTTAG
Trigger: CCCAGCTGTGGTCACTGTTTCTTGTGGCAGCTCGGTGGCCCACAAGCGTCCCCACTGATTGGAGAGTGTGTCCAGGGCAGTGCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465955.1
CDS GCA 72 bp CAGGCATCTGCCACTCAGAGCCGAGCAGCTCCGACCTaGAGTGGCTGCAAAGAGGATGCACCAAGGAGAGGG +
Preference number: 6 (lower is better)
Translates to: QASATQSRAAPT*SGCKEDAPRRG
Trigger: CCCTCTCCTTGGTGCATCCTCTTTGCAGCCACTGCAGGTCGGAGCTGCTCGGCTCTGAGTGGCAGATGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495217.1
CDS GCA 72 bp CAGGCGTGGCTCTTCACACCTGAGAACACAGGCATCTaGCACTCAGAGCCGAGCAGCTCCGACCTGCAGTGG +
Preference number: 6 (lower is better)
Translates to: QAWLFTPENTGI*HSEPSSSDLQW
Trigger: CCACTGCAGGTCGGAGCTGCTCGGCTCTGAGTGGCAGATGCCTGTGTTCTCAGGTGTGAAGAGCCACGCCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495217.1
CDS CCA 72 bp CACCAGGCCTGCAGGGACTGCTTCTGGAAGCTGCTGTaGGTCAGCCCTGTCCCTGTCCTCATAACCCCGCAT +
Preference number: 6 (lower is better)
Translates to: HQACRDCFWKLL*VSPVPVLITPH
Trigger: ATGCGGGGTTATGAGGACAGGGACAGGGCTGACCCACAGCAGCTTCCAGAAGCAGTCCCTGCAGGCCTGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 72 bp GCCGGATGCCGTGTTTTGGAACCGAGCTGGTGTCAGTaGTGGTGGTGGCCAGCTTCCCCAGAACCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: AGCRVLEPSWCQ*WWWPASPEPAP
Trigger: TGGAGCTGGTTCTGGGGAAGCTGGCCACCACCACCACTGACACCAGCTCGGTTCCAAAACACGGCATCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS CCA 72 bp AGCCCCAGCACTGCCCTGGACACACTCTCCAATCAGTaGGGACGCTTGTGGGCCACCGAGCTGCCACAAGAA +
Preference number: 6 (lower is better)
Translates to: SPSTALDTLSNQ*GRLWATELPQE
Trigger: TTCTTGTGGCAGCTCGGTGGCCCACAAGCGTCCCCACTGATTGGAGAGTGTGTCCAGGGCAGTGCTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465955.1
CDS CCA 72 bp ATGGAGGAGGCGTCGATGGTGGTGGTCTCCGGGAGGTaGTCCAGGTCATCGATCCTCACCGCGAGCACCTAT +
Preference number: 6 (lower is better)
Translates to: MEEASMVVVSGR*SRSSILTASTY
Trigger: ATAGGTGCTCGCGGTGAGGATCGATGACCTGGACCACCTCCCGGAGACCACCACCATCGACGCCTCCTCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477633.1
CDS CAA 72 bp CCCTCGGCTCCATCTTCCAGTCGTCTGATCTCCAAGTaGGGAGGAAGGGATGACCTGCCCTGGGCCACCAGG +
Preference number: 6 (lower is better)
Translates to: PSAPSSSRLISK*GGRDDLPWATR
Trigger: CCTGGTGGCCCAGGGCAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACGACTGGAAGATGGAGCCGAGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CAA 72 bp GGCCGCACCAGCATCATCCAGTTGCAGTCATCCTCGTaGGAGGTGTCGAAGCACACGGGGTGCCCGTCCTTC +
Preference number: 6 (lower is better)
Translates to: GRTSIIQLQSSS*EVSKHTGCPSF
Trigger: GAAGGACGGGCACCCCGTGTGCTTCGACACCTCCAACGAGGATGACTGCAACTGGATGATGCTGGTGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 72 bp GCACTCCTTCCAGGTGCCGGCGCTGGTGGTCCAGCATaGCGTCCTTGCGGTAGAACATCTTGCTGCAGACCT +
Preference number: 6 (lower is better)
Translates to: ALLPGAGAGGPA*RPCGRTSCCRP
Trigger: AGGTCTGCAGCAAGATGTTCTACCGCAAGGACGTCATGCTGGACCACCAGCGCCGGCACCTGGAAGGAGTGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000491486.5
CDS GCA 72 bp CTGTCCTGCAGTTGTGGAACTCCAGCGCGCTCTCGATaGGGAAGGTCTTCTCACAAGTGCCGCAGCGGTACC +
Preference number: 6 (lower is better)
Translates to: LSCSCGTPARSR*GRSSHKCRSGT
Trigger: GGTACCGCTGCGGCACTTGTGAGAAGACCTTCCGCATCGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000491486.5
ENST00000496124.1
CDS GCA 72 bp CACCAGAGGTGGCAATTGCTCCCGCACGGCCACTCGTaGCCACGGATTCTAAGACTCCACCTTCCAAGGGAG +
Preference number: 6 (lower is better)
Translates to: HQRWQLLPHGHS*PRILRLHLPRE
Trigger: CTCCCTTGGAAGGTGGAGTCTTAGAATCCGTGGGCACGAGTGGCCGTGCGGGAGCAATTGCCACCTCTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CCA 72 bp AGCCGGCCTGCTTCAGCATGGGCTTGTCCATCTTCTTaGCATAGAAGGCCGCATACCACACGCGCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: SRPASAWACPSS*HRRPHTTRAAR
Trigger: CCGAGCTGCGCGTGTGGTATGCGGCCTTCTATGCCAAGAAGATGGACAAGCCCATGCTGAAGCAGGCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CCA 72 bp CTGCAGCGTGGACGCCAGAGCCGGCCTGCTTCAGCATaGGCTTGTCCATCTTCTTGGCATAGAAGGCCGCAT +
Preference number: 6 (lower is better)
Translates to: LQRGRQSRPASA*ACPSSWHRRPH
Trigger: ATGCGGCCTTCTATGCCAAGAAGATGGACAAGCCCATGCTGAAGCAGGCCGGCTCTGGCGTCCACGCTGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CCA 72 bp CAGCTTCCCCAGAACCAGCTCCATGATCCGCTCATCTaGCGTTGCACTCACAGGCTCATCCGGAGGGACCTC +
Preference number: 6 (lower is better)
Translates to: QLPQNQLHDPLI*RCTHRLIRRDL
Trigger: GAGGTCCCTCCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGGGGAAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CAA 90 bp CCGCTGGCAGGCCAAGACCTTGCCCTGCTTAACACAAAGGAGTCTTaGACCATGACCACTGGGCCCAGCTCGGGACATTCGGAGTCGTGG +
Preference number: 6 (lower is better)
Translates to: PLAGQDLALLNTKES*TMTTGPSSGHSESW
Trigger: CCACGACTCCGAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAAGACTCCTTTGTGTTAAGCAGGGCAAGGTCTTGGCCTGCCAGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS TCA 72 bp TGGCGAACACCCCCTCGGCTCCATCTTCCAGTCGTCTaGTCTCCAAGTTGGGAGGAAGGGATGACCTGCCCT +
Preference number: 6 (lower is better)
Translates to: WRTPPRLHLPVV*SPSWEEGMTCP
Trigger: AGGGCAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACGACTGGAAGATGGAGCCGAGGGGGTGTTCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS TCA 72 bp GACTCAAAGGGACCGAACTGTGTCCGCTTGACGAGCTaGGTGATGGCGAACACCCCCTCGGCTCCATCTTCC +
Preference number: 6 (lower is better)
Translates to: DSKGPNCVRLTS*VMANTPSAPSS
Trigger: GGAAGATGGAGCCGAGGGGGTGTTCGCCATCACTCAGCTCGTCAAGCGGACACAGTTCGGTCCCTTTGAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 72 bp TGGCGAACACCCCCTCGGCTCCATCTTCCAGTCGTCTaGTCTCCAAGTTGGGAGGAAGGGATGACCTTGCCC +
Preference number: 6 (lower is better)
Translates to: WRTPPRLHLPVV*SPSWEEGMTLP
Trigger: GGGCAAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACGACTGGAAGATGGAGCCGAGGGGGTGTTCGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 72 bp GAAGAGACACGCAGGTCACTAGTGCAGCCATCCCAATaGCCCTGGCCTGCTGGACGAGGCAAGAAGCCTGTC +
Preference number: 6 (lower is better)
Translates to: EETRRSLVQPSQ*PWPAGRGKKPV
Trigger: GACAGGCTTCTTGCCTCGTCCAGCAGGCCAGGGTCATTGGGATGGCTGCACTAGTGACCTGCGTGTCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000470586.5
ENST00000486812.5
CDS GCA 72 bp CCTGCTCCTTCTCGGGAGCTGCTGCCTCGCTTTGGCTaGCTGGAGGAAGGCTTTTGGCTTGTTCTAAGTGGC +
Preference number: 6 (lower is better)
Translates to: PAPSRELLPRFG*LEEGFWLVLSG
Trigger: GCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAAGGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 72 bp CCCCAGAACCAGCTCCATGATCCGCTCATCTGGCGTTaGACTCACAGGCTCATCCGGAGGGACCTCGGTAAT +
Preference number: 6 (lower is better)
Translates to: PQNQLHDPLIWR*THRLIRRDLGN
Trigger: ATTACCGAGGTCCCTCCGGATGAGCCTGTGAGTGCAACGCCAGATGAGCGGATCATGGAGCTGGTTCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CCA 72 bp GCCCTGGACACACTCTCCAATCAGTGGGGACGCTTGTaGGCCACCGAGCTGCCACAAGAAACAGTGACCACA +
Preference number: 6 (lower is better)
Translates to: ALDTLSNQWGRL*ATELPQETVTT
Trigger: TGTGGTCACTGTTTCTTGTGGCAGCTCGGTGGCCCACAAGCGTCCCCACTGATTGGAGAGTGTGTCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465955.1
CDS CCA 72 bp CCAGAAGCGGATGCTTTAATAGACCAACACCAGAGGTaGCAATTGCTCCCGCACGGCCACTCGTGCCCACGG +
Preference number: 6 (lower is better)
Translates to: PEADALIDQHQR*QLLPHGHSCPR
Trigger: CCGTGGGCACGAGTGGCCGTGCGGGAGCAATTGCCACCTCTGGTGTTGGTCTATTAAAGCATCCGCTTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 72 bp ACTGCCCTGGACACACTCTCCAATCAGTGGGGACGCTaGTGGGCCACCGAGCTGCCACAAGAAACAGTGACC +
Preference number: 6 (lower is better)
Translates to: TALDTLSNQWGR*WATELPQETVT
Trigger: GGTCACTGTTTCTTGTGGCAGCTCGGTGGCCCACAAGCGTCCCCACTGATTGGAGAGTGTGTCCAGGGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465955.1
CDS GCA 72 bp GAAATCCAGCCGGGTTTTGACTCCGATCGCCAACGGTaGCCGCAGCCGGCGAATGTAACAAAGAACAGTCGG +
Preference number: 6 (lower is better)
Translates to: EIQPGFDSDRQR*PQPANVTKNSR
Trigger: CCGACTGTTCTTTGTTACATTCGCCGGCTGCGGGCACCGTTGGCGATCGGAGTCAAAACCCGGCTGGATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp CAGTCATCCTCGTTGGAGGTGTCGAAGCACACGGGGTaGCCGTCCTTCTGGAACACCTTCAGGGGAAATGCA +
Preference number: 6 (lower is better)
Translates to: QSSSLEVSKHTG*PSFWNTFRGNA
Trigger: TGCATTTCCCCTGAAGGTGTTCCAGAAGGACGGGCACCCCGTGTGCTTCGACACCTCCAACGAGGATGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS GCA 72 bp TCCTTCCAAAACTTCCCAGCTAATCCCGAGCCTGTATaGGAGAAAGGAGGGAATGCGCCCGGGCGTCACTCC +
Preference number: 6 (lower is better)
Translates to: SFQNFPANPEPV*EKGGNAPGRHS
Trigger: GGAGTGACGCCCGGGCGCATTCCCTCCTTTCTCGCATACAGGCTCGGGATTAGCTGGGAAGTTTTGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489661.5
CDS CCA 72 bp TCTCCAGGGTGTGCTATGAGTCCTGTCCTGCAGTTGTaGAACTCCAGCGCGCTCTCGATGCGGAAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: SPGCAMSPVLQL*NSSALSMRKVF
Trigger: GAAGACCTTCCGCATCGAGAGCGCGCTGGAGTTCCACAACTGCAGGACAGGACTCATAGCACACCCTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422911.6
ENST00000449395.6
CDS CAA 90 bp TGCCCGTTGCTGAGTGGTTTAGGAAAGTGTGCATGCTGGCACTTCTaGAATGCTGATTCCACACGCCCTCCACCCCGCTCATCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: CPLLSGLGKCACWHF*NADSTRPPPRSSPA
Trigger: TGCTGGGGATGAGCGGGGTGGAGGGCGTGTGGAATCAGCATTCAAGAAGTGCCAGCATGCACACTTTCCTAAACCACTCAGCAACGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CAA 90 bp TTGGGAGGAAGGGATGACCTTGCCCTGCTTAACACAAAGGAGTCTTaGACCATGACCACTGGGCCCAGCTCGGGACATTCGGAGTCGTGG +
Preference number: 6 (lower is better)
Translates to: LGGRDDLALLNTKES*TMTTGPSSGHSESW
Trigger: CCACGACTCCGAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCCTTCCTCCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CAA 90 bp GAGCCAGAAGCGGATGCTTTAATAGACCAACACCAGAGGTGGCAATaGCTCCCGCACGGCCACTCGTGCCCACGGATTCTAAGACTCCAC +
Preference number: 6 (lower is better)
Translates to: EPEADALIDQHQRWQ*LPHGHSCPRILRLH
Trigger: GTGGAGTCTTAGAATCCGTGGGCACGAGTGGCCGTGCGGGAGCAATTGCCACCTCTGGTGTTGGTCTATTAAAGCATCCGCTTCTGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS GCA 72 bp GCAAGTGTGACTCAGTTTCATAGCCGCATTCGGCCTTaGCTGCCCCAGTTCCTCCTCCGTTCGCAATCTTCC +
Preference number: 6 (lower is better)
Translates to: ASVTQFHSRIRP*LPQFLLRSQSS
Trigger: GGAAGATTGCGAACGGAGGAGGAACTGGGGCAGGCAAGGCCGAATGCGGCTATGAAACTGAGTCACACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp CGTACTTCTTGTCGCACACGGAGCACGTCCACTGCTTaGCCACTTTTCACACACACGCAGACACACATGCGC +
Preference number: 6 (lower is better)
Translates to: RTSCRTRSTSTA*PLFTHTQTHMR
Trigger: GCGCATGTGTGTCTGCGTGTGTGTGAAAAGTGGGCAAGCAGTGGACGTGCTCCGTGTGCGACAAGAAGTACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000470586.5
ENST00000486812.5
CDS CCA 72 bp ATGACCACTGGGCCCAGCTCGGGACATTCGGAGTCGTaGTACTGGCTGCAGTCTTCACACCAGATGAACATG +
Preference number: 6 (lower is better)
Translates to: MTTGPSSGHSES*YWLQSSHQMNM
Trigger: CATGTTCATCTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGAATGTCCCGAGCTGGGCCCAGTGGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CAA 72 bp GGCCAAGACCTTGCCCTGCTTAACACAAAGGAGTCTTaGACCATGACCACTGGGCCCAGCTCGGGACATTCG +
Preference number: 6 (lower is better)
Translates to: GQDLALLNTKES*TMTTGPSSGHS
Trigger: CGAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAAGACTCCTTTGTGTTAAGCAGGGCAAGGTCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CAA 90 bp TTCTCGGGAGCTGCTGCCTCGCTTTGGCTGCCTGGAGGAAGGCTTTaGGCTTGTTCTAAGTGGCCCAACAGATGTTCATTGAGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: FSGAAASLWLPGGRL*ACSKWPNRCSLRSC
Trigger: GCAGCTCCTCAATGAACATCTGTTGGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGCTCCCGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 72 bp TTTAGGAAAGTGTGCATGCTGGCACTTCTTGAATGCTaGTTCCACACGCCCTCCACCCCGCTCATCCCCAGC +
Preference number: 6 (lower is better)
Translates to: FRKVCMLALLEC*FHTPSTPLIPS
Trigger: GCTGGGGATGAGCGGGGTGGAGGGCGTGTGGAATCAGCATTCAAGAAGTGCCAGCATGCACACTTTCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 72 bp ACTGGGCCCAGCTCGGGACATTCGGAGTCGTGGTACTaGCTGCAGTCTTCACACCAGATGAACATGATCTCT +
Preference number: 6 (lower is better)
Translates to: TGPSSGHSESWY*LQSSHQMNMIS
Trigger: AGAGATCATGTTCATCTGGTGTGAAGACTGCAGCCAGTACCACGACTCCGAATGTCCCGAGCTGGGCCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CCA 72 bp ACAGGACCCGTGTTCCCCGGAGCGAAGGGAAACGTGTaGCACGTAATTATGTATGTGGTCCACAGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: TGPVFPGAKGNV*HVIMYVVHREG
Trigger: TCCCTCTCTGTGGACCACATACATAATTACGTGCCACACGTTTCCCTTCGCTCCGGGGAACACGGGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 72 bp AGGGATGACCTTGCCCTGCTTAACACAAAGGAGTCTTaGACCATGACCACTGGGCCCAGCTCGGGACATTCG +
Preference number: 6 (lower is better)
Translates to: RDDLALLNTKES*TMTTGPSSGHS
Trigger: CGAATGTCCCGAGCTGGGCCCAGTGGTCATGGTCAAAGACTCCTTTGTGTTAAGCAGGGCAAGGTCATCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CAA 72 bp CCCTCGGCTCCATCTTCCAGTCGTCTGATCTCCAAGTaGGGAGGAAGGGATGACCTTGCCCTGCTTAACACA +
Preference number: 6 (lower is better)
Translates to: PSAPSSSRLISK*GGRDDLALLNT
Trigger: TGTGTTAAGCAGGGCAAGGTCATCCCTTCCTCCCAACTTGGAGATCAGACGACTGGAAGATGGAGCCGAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CAA 90 bp TCCTTCTGGAACACCTTCAGGGGAAATGCAGACTCCTTTTCCCATTaGGCGACCCTCCTGGACTCAAAGGGACCGAACTGTGTCCGCTTG +
Preference number: 6 (lower is better)
Translates to: SFWNTFRGNADSFSH*ATLLDSKGPNCVRL
Trigger: CAAGCGGACACAGTTCGGTCCCTTTGAGTCCAGGAGGGTCGCCAAATGGGAAAAGGAGTCTGCATTTCCCCTGAAGGTGTTCCAGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 72 bp CCTCATTCCCTAGAGATGTTTCCAAGAGCTGCTCACTaGCCCTCTGGTTCCCAATCTGGGACCAGGACTCAG +
Preference number: 6 (lower is better)
Translates to: PHSLEMFPRAAH*PSGSQSGTRTQ
Trigger: CTGAGTCCTGGTCCCAGATTGGGAACCAGAGGGTCAGTGAGCAGCTCTTGGAAACATCTCTAGGGAATGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp TCGGACACCTCATTCCCTAGAGATGTTTCCAAGAGCTaGTCACTGACCCTCTGGTTCCCAATCTGGGACCAG +
Preference number: 6 (lower is better)
Translates to: SDTSFPRDVSKS*SLTLWFPIWDQ
Trigger: CTGGTCCCAGATTGGGAACCAGAGGGTCAGTGAGCAGCTCTTGGAAACATCTCTAGGGAATGAGGTGTCCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS GCA 72 bp GCCTGCTCAGGTTGCTGCTGTTCTGGAAGATCTTGCTaGAGATATTGCACTGGTAAACCCGCTTGTGCTCCC +
Preference number: 6 (lower is better)
Translates to: ACSGCCCSGRSC*RYCTGKPACAP
Trigger: GGGAGCACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAGCAGCAACCTGAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000496124.1
CDS GCA 72 bp TCGCACTTAAACAGCTTGTCACCATGCGAGCGCACGTaGCTGCTCAGGTTGCTGCTGTTCTGGAAGATCTTG +
Preference number: 6 (lower is better)
Translates to: SHLNSLSPCERT*LLRLLLFWKIL
Trigger: CAAGATCTTCCAGAACAGCAGCAACCTGAGCAGGCACGTGCGCTCGCATGGTGACAAGCTGTTTAAGTGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000496124.1
CDS GCA 72 bp TTGCTGCAGACCTCACAGGCAAACTTCTTGTCGCCGTaGTTCTTCTTGTGCTTGGAGAGGTTGCTGTCCTGC +
Preference number: 6 (lower is better)
Translates to: LLQTSQANFLSP*FFLCLERLLSC
Trigger: GCAGGACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGAGGTCTGCAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS GCA 72 bp GGCTCATGGATTGGCCTCACGGGAGCCAGAAGCGGATaGTTTAATAGACCAACACCAGAGGTGGCAATTGCT +
Preference number: 6 (lower is better)
Translates to: GSWIGLTGARSG*FNRPTPEVAIA
Trigger: AGCAATTGCCACCTCTGGTGTTGGTCTATTAAAGCATCCGCTTCTGGCTCCCGTGAGGCCAATCCATGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CCA 72 bp GAGATCCCGATCTTGCCGATAAACTCTTCCCTCTGGTaGTCATCCATCAACGCGATGTCCTTGCCACACACC +
Preference number: 6 (lower is better)
Translates to: EIPILPINSSLW*SSINAMSLPHT
Trigger: GGTGTGTGGCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491486.5
CDS CCA 72 bp GAGGAGATCCCGATCTTGCCGATAAACTCTTCCCTCTaGTGGTCATCCATCAACGCGATGTCCTTGCCACAC +
Preference number: 6 (lower is better)
Translates to: EEIPILPINSSL*WSSINAMSLPH
Trigger: GTGTGGCAAGGACATCGCGTTGATGGATGACCACCAGAGGGAAGAGTTTATCGGCAAGATCGGGATCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491486.5
CDS CAA 72 bp GCTGCTGCCTCGCTTTGGCTGCCTGGAGGAAGGCTTTaGGCTTGTTCTAAGTGGCCCAACAGATGTTCATTG +
Preference number: 6 (lower is better)
Translates to: AAASLWLPGGRL*ACSKWPNRCSL
Trigger: CAATGAACATCTGTTGGGCCACTTAGAACAAGCCAAAAGCCTTCCTCCAGGCAGCCAAAGCGAGGCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 72 bp CTGCCACTTGCTCTGTGGGTTCCTTGTCTTCCACGATaGCTAGAGGCTGCTCAGCTTTGGACACTTTGGGTT +
Preference number: 6 (lower is better)
Translates to: LPLALWVPCLPR*LEAAQLWTLWV
Trigger: AACCCAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGTGGAAGACAAGGAACCCACAGAGCAAGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS TCA 72 bp GCAAGCATCCCCAACAGACGGCCACGTGAGGAAAGTTaGGAGGACATTCCTCAGAAGCTAAAGGACCCCAAA +
Preference number: 6 (lower is better)
Translates to: ASIPNRRPREES*EDIPQKLKDPK
Trigger: TTTGGGGTCCTTTAGCTTCTGAGGAATGTCCTCTCAACTTTCCTCACGTGGCCGTCTGTTGGGGATGCTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS TCA 72 bp GTGAAGACGAAAAGGCCGGCCCTTAGCGACTCTGATTaGGAGAGTCTGGGAAAGAAAACCCAAGCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: VKTKRPALSDSD*ESLGKKTQAWS
Trigger: AGACCAGGCTTGGGTTTTCTTTCCCAGACTCTCTCAATCAGAGTCGCTAAGGGCCGGCCTTTTCGTCTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS GCA 72 bp GGTTGCTGCTGTTCTGGAAGATCTTGCTGCAGATATTaGACTGGTAAACCCGCTTGTGCTCCCCGAGCTGTT +
Preference number: 6 (lower is better)
Translates to: GCCCSGRSCCRY*TGKPACAPRAV
Trigger: AACAGCTCGGGGAGCACAAGCGGGTTTACCAGTGCAATATCTGCAGCAAGATCTTCCAGAACAGCAGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
ENST00000489661.5
ENST00000496124.1
CDS GCA 72 bp TTGCTGCAGACCTCACAGGCAAACTTCTTGTCGCCGTaGTTCTTCTTGTGCTTGGAGAGGTTGCTGGTAGGT +
Preference number: 6 (lower is better)
Translates to: LLQTSQANFLSP*FFLCLERLLVG
Trigger: ACCTACCAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGAGGTCTGCAGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449395.6
CDS GCA 72 bp CATAGCCATCATCGTGACATTCCCAGGATCAGGAGGTaGACGGTAGGTGGCCTTGTGGTGGAAACAGGTTTA +
Preference number: 6 (lower is better)
Translates to: HSHHRDIPRIRR*TVGGLVVETGL
Trigger: TAAACCTGTTTCCACCACAAGGCCACCTACCGTGCACCTCCTGATCCTGGGAATGTCACGATGATGGCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CCA 72 bp CCTAGAGATGTTTCCAAGAGCTGCTCACTGACCCTCTaGTTCCCAATCTGGGACCAGGACTCAGCTTCTCTA +
Preference number: 6 (lower is better)
Translates to: PRDVSKSCSLTL*FPIWDQDSASL
Trigger: TAGAGAAGCTGAGTCCTGGTCCCAGATTGGGAACCAGAGGGTCAGTGAGCAGCTCTTGGAAACATCTCTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 72 bp TGCCCGTTGCTGAGTGGTTTAGGAAAGTGTGCATGCTaGCACTTCTTGAATGCTGATTCCACACGCCCTCCA +
Preference number: 6 (lower is better)
Translates to: CPLLSGLGKCAC*HFLNADSTRPP
Trigger: TGGAGGGCGTGTGGAATCAGCATTCAAGAAGTGCCAGCATGCACACTTTCCTAAACCACTCAGCAACGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CAA 72 bp CAGGCAAACTTCTTGTCGCCGTGCTTCTTCTTGTGCTaGGAGAGGTTGCTGTCCTGCAGTTGTGGAACTCCA +
Preference number: 6 (lower is better)
Translates to: QANFLSPCFFLC*ERLLSCSCGTP
Trigger: TGGAGTTCCACAACTGCAGGACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS CAA 72 bp ACCTCACAGGCAAACTTCTTGTCGCCGTGCTTCTTCTaGTGCTTGGAGAGGTTGCTGTCCTGCAGTTGTGGA +
Preference number: 6 (lower is better)
Translates to: TSQANFLSPCFF*CLERLLSCSCG
Trigger: TCCACAACTGCAGGACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS GCA 72 bp TCACAGGCAAACTTCTTGTCGCCGTGCTTCTTCTTGTaGTTGGAGAGGTTGCTGTCCTGCAGTTGTGGAACT +
Preference number: 6 (lower is better)
Translates to: SQANFLSPCFFL*LERLLSCSCGT
Trigger: AGTTCCACAACTGCAGGACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000441787.5
CDS CAA 72 bp TCCTTGTCTTCCACGATGACTAGAGGCTGCTCAGCTTaGGACACTTTGGGTTTTCTCCCCCTTCGAGGCTTT +
Preference number: 6 (lower is better)
Translates to: SLSSTMTRGCSA*DTLGFLPLRGF
Trigger: AAAGCCTCGAAGGGGGAGAAAACCCAAAGTGTCCAAAGCTGAGCAGCCTCTAGTCATCGTGGAAGACAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000441787.5
ENST00000447016.6
ENST00000449395.6
CDS CAA 72 bp AAAATTCAAGAAGGGATACTTGAAAGCTGTGGCGGGTaGACCTTCAGAGGCCAAGGGGCCACCATGAAGCCA +
Preference number: 6 (lower is better)
Translates to: KIQEGILESCGG*TFRGQGATMKP
Trigger: TGGCTTCATGGTGGCCCCTTGGCCTCTGAAGGTCAACCCGCCACAGCTTTCAAGTATCCCTTCTTGAATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 90 bp TTGCTGCAGACCTCACAGGCAAACTTCTTGTCGCCGTGCTTCTTCTaGTGCTTGGAGAGGTTGCTGTTGGTGGAGAAGAATCTGAAACAC +
Preference number: 6 (lower is better)
Translates to: LLQTSQANFLSPCFF*CLERLLLVEKNLKH
Trigger: GTGTTTCAGATTCTTCTCCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGAGGTCTGCAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000489661.5
ENST00000491486.5
CDS TCA 72 bp ACATCCAAGAGCAAGCATCCCCAACAGACGGCCACGTaGGGAAAGTTGAGAGGACATTCCTCAGAAGCTAAA +
Preference number: 6 (lower is better)
Translates to: TSKSKHPQQTAT*GKLRGHSSEAK
Trigger: TTTAGCTTCTGAGGAATGTCCTCTCAACTTTCCTCACGTGGCCGTCTGTTGGGGATGCTTGCTCTTGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS TCA 72 bp ACACGTTCCAGGCACTGTAGGGCCTTCAGGAGAAGGTaGATTGCAAGAAGACAGCAGACAATGAACGCTCAT +
Preference number: 6 (lower is better)
Translates to: TRSRHCRAFRRR*IARRQQTMNAH
Trigger: ATGAGCGTTCATTGTCTGCTGTCTTCTTGCAATTCACCTTCTCCTGAAGGCCCTACAGTGCCTGGAACGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS GCA 72 bp TCACAGGCAAACTTCTTGTCGCCGTGCTTCTTCTTGTaGTTGGAGAGGTTGCTGTTGGTGGAGAAGAATCTG +
Preference number: 6 (lower is better)
Translates to: SQANFLSPCFFL*LERLLLVEKNL
Trigger: CAGATTCTTCTCCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000489661.5
ENST00000491486.5
CDS CCA 72 bp CCATCTCTGACACCTTACATTAGTGATTTCAAAATGTaGTCCCTGGACCAGGAACCAGCAGTGCCAGCACTG +
Preference number: 6 (lower is better)
Translates to: PSLTPYISDFKM*SLDQEPAVPAL
Trigger: CAGTGCTGGCACTGCTGGTTCCTGGTCCAGGGACCACATTTTGAAATCACTAATGTAAGGTGTCAGAGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000447016.6
CDS CAA 72 bp ACCTCACAGGCAAACTTCTTGTCGCCGTGCTTCTTCTaGTGCTTGGAGAGGTTGCTGTTGGTGGAGAAGAAT +
Preference number: 6 (lower is better)
Translates to: TSQANFLSPCFF*CLERLLLVEKN
Trigger: ATTCTTCTCCACCAACAGCAACCTCTCCAAGCACAAGAAGAAGCACGGCGACAAGAAGTTTGCCTGTGAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000489661.5
ENST00000491486.5
CDS CAA 72 bp GTTCTGAGAACCCAGATGAGGGCATGTGGCCCAGTCTaGGGGAGCAAGAGTATCCCAAAAATGGTAAAGCAT +
Preference number: 6 (lower is better)
Translates to: VLRTQMRACGPV*GSKSIPKMVKH
Trigger: ATGCTTTACCATTTTTGGGATACTCTTGCTCCCCAAGACTGGGCCACATGCCCTCATCTGGGTTCTCAGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 90 bp CAATATGAGAAAATTCAAGAAGGGATACTTGAAAGCTGTGGCGGGTaGACCTTCAGAGGCCAAGGGGCCACCATGAAGCCAAGACAACAC +
Preference number: 6 (lower is better)
Translates to: QYEKIQEGILESCGG*TFRGQGATMKPRQH
Trigger: GTGTTGTCTTGGCTTCATGGTGGCCCCTTGGCCTCTGAAGGTCAACCCGCCACAGCTTTCAAGTATCCCTTCTTGAATTTTCTCATATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CCA 72 bp AAAATATTTGATAAGTACTCAGTCAGTCCTGGCTCATaGATTGGCCTCACGGGAGCCAGAAGCGGATGCTTT +
Preference number: 6 (lower is better)
Translates to: KIFDKYSVSPGS*IGLTGARSGCF
Trigger: AAAGCATCCGCTTCTGGCTCCCGTGAGGCCAATCCATGAGCCAGGACTGACTGAGTACTTATCAAATATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 72 bp TATTTGATAAGTACTCAGTCAGTCCTGGCTCATGGATaGGCCTCACGGGAGCCAGAAGCGGATGCTTTAATA +
Preference number: 6 (lower is better)
Translates to: YLISTQSVLAHG*ASREPEADALI
Trigger: TATTAAAGCATCCGCTTCTGGCTCCCGTGAGGCCAATCCATGAGCCAGGACTGACTGAGTACTTATCAAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS CAA 72 bp AACGCTCATCCCCAGCCTCGGCCAGCAAAGTGTGGCTaGGAAAGTTTATGCTTCCATAGTGACATTTCATAT +
Preference number: 6 (lower is better)
Translates to: NAHPQPRPAKCG*ESLCFHSDISY
Trigger: ATATGAAATGTCACTATGGAAGCATAAACTTTCCAAGCCACACTTTGCTGGCCGAGGCTGGGGATGAGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS TCA 72 bp TGTGCTTGGAGAGGTTGCTGTTGGTGGAGAAGAATCTaGAACACATCTCACATTGGAACGTCTTGTCATCTG +
Preference number: 6 (lower is better)
Translates to: CAWRGCCWWRRI*NTSHIGTSCHL
Trigger: CAGATGACAAGACGTTCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCAACAGCAACCTCTCCAAGCACA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000422911.6
ENST00000447016.6
ENST00000489661.5
ENST00000491486.5
CDS CCA 72 bp CTGTTGGTGGAGAAGAATCTGAAACACATCTCACATTaGAACGTCTTGTCATCTGGTAGGTCTCTAAGCCGA +
Preference number: 6 (lower is better)
Translates to: LLVEKNLKHISH*NVLSSGRSLSR
Trigger: TCGGCTTAGAGACCTACCAGATGACAAGACGTTCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCAACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422911.6
CDS CAA 72 bp GCTGTTGGTGGAGAAGAATCTGAAACACATCTCACATaGGAACGTCTTGTCATCTGTCCTGCAGTTGTGGAA +
Preference number: 6 (lower is better)
Translates to: AVGGEESETHLT*ERLVICPAVVE
Trigger: TTCCACAACTGCAGGACAGATGACAAGACGTTCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCAACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269844.5
ENST00000398548.6
ENST00000447016.6
ENST00000489661.5
ENST00000491486.5
CDS CAA 90 bp TTTTTAAAATATTTGATAAGTACTCAGTCAGTCCTGGCTCATGGATaGGCCTCACGGGAGCCAGAAGCGGATGCTTTAATAGACCAACAC +
Preference number: 6 (lower is better)
Translates to: FLKYLISTQSVLAHG*ASREPEADALIDQH
Trigger: GTGTTGGTCTATTAAAGCATCCGCTTCTGGCTCCCGTGAGGCCAATCCATGAGCCAGGACTGACTGAGTACTTATCAAATATTTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS TCA 72 bp ACACAACTCCACCACTCAGGGACAACCTCTCAATTCTaGTGTCTCAATTTTCTCTCCACAAGCACAAAAACA +
Preference number: 6 (lower is better)
Translates to: TQLHHSGTTSQF*CLNFLSTSTKT
Trigger: TGTTTTTGTGCTTGTGGAGAGAAAATTGAGACATCAGAATTGAGAGGTTGTCCCTGAGTGGTGGAGTTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486812.5
CDS TCA 72 bp AGACCGTGCAAAACTCATATGGAAACTCACAGTCACTaGACTTGTGTGTATTCACGTTCAAAGGTATCTCGT +
Preference number: 6 (lower is better)
Translates to: RPCKTHMETHSH*TCVYSRSKVSR
Trigger: ACGAGATACCTTTGAACGTGAATACACACAAGTTCAGTGACTGTGAGTTTCCATATGAGTTTTGCACGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269844.5
CDS CCA 72 bp TGTCTGAAAACACAGACAGAAAGTGGAACCCACATGTaGACAAGCAGAAAAACGATAGGAATTTCTTTAAAG +
Preference number: 6 (lower is better)
Translates to: CLKTQTESGTHM*TSRKTIGISLK
Trigger: CTTTAAAGAAATTCCTATCGTTTTTCTGCTTGTCCACATGTGGGTTCCACTTTCTGTCTGTGTTTTCAGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486812.5