RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDM13 (Homo sapiens)

Ensembl gene IDs: ENSG00000112238

Ensembl transcript IDs: ENST00000369214.2, ENST00000369215.5

Found 411 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTTGGGCTTACCTGCGCCGCTGCCTCCGCTGCCGCCGCCCCCGGTaGCTCCCGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCA +
Preference number: 1 (lower is better)
Translates to: SWAYLRRCLRCRRPR*LPPPRRPVATSPSP
Trigger: TGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCGGGAGGCACCGGGGGCGGCGGCAGCGGAGGCAGCGGCGCAGGTAAGCCCAAGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp CACAGTAGAGGCACAGGTGGCCGGTCTTGGGCTTACCTGCGCCGCTaGCTCCGCTGCCGCCGCCCCCGGTGCCTCCCGCCGCCGCGACGG +
Preference number: 1 (lower is better)
Translates to: HSRGTGGRSWAYLRR*LRCRRPRCLPPPRR
Trigger: CCGTCGCGGCGGCGGGAGGCACCGGGGGCGGCGGCAGCGGAGGCAGCGGCGCAGGTAAGCCCAAGACCGGCCACCTGTGCCTCTACTGTG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 90 bp CTGGGGTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTaGTGCCCTCCCGCGCACCGCAGGCCTGAACTGGTGGCGGGCCCA +
Preference number: 1 (lower is better)
Translates to: LGSARWPRARKRPRA*CPPAHRRPELVAGP
Trigger: TGGGCCCGCCACCAGTTCAGGCCTGCGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGACCCCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp GGCCCCCGCCCAGCAGCCTGCCCAAAGCGAGGCCGGCTCCTTGCTTaGTGCTGCTCTCCTCCCGGTAGGGGTCGCCGTGAGCGGCCGCCG +
Preference number: 1 (lower is better)
Translates to: GPRPAACPKRGRLLA*CCSPPGRGRRERPP
Trigger: CGGCGGCCGCTCACGGCGACCCCTACCGGGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCTTTGGGCAGGCTGCTGGGCGGGGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp GGCCAGGCGGCGGCGGCGGCGGCGGGTCCCCAGCGAGCAGGCACTTaGGATGGTGGTGGTGGTGCGCGTGGTGGTGATGGTGGTGACCCG +
Preference number: 1 (lower is better)
Translates to: GQAAAAAAGPQRAGT*DGGGGARGGDGGDP
Trigger: CGGGTCACCACCATCACCACCACGCGCACCACCACCACCATCCCAAGTGCCTGCTCGCTGGGGACCCGCCGCCGCCGCCGCCGCCTGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp CCGGGCTCGGCACCCGGGCCGTCGCCCGCTTTGGCGAGCAGACTCTaGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGG +
Preference number: 1 (lower is better)
Translates to: PGSAPGPSPALASRL*PGWRDLTCRSRSRR
Trigger: CCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGGCCCGGGTGCCGAGCCCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp GGGCACGGTCCAGCTGCTCCTTGCCCTTCTTGGGCTGCCCCCACTTaGCTGGGGTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGC +
Preference number: 1 (lower is better)
Translates to: GHGPAAPCPSWAAPT*LGSARWPRARKRPR
Trigger: GCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCAGCTGGACCGTGCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp AGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTaGCCTTGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCC +
Preference number: 1 (lower is better)
Translates to: RLPTPAEEPPTMPRK*PCPRAAPLMSRARS
Trigger: GGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 90 bp GCGGAAGAGGCCTCGCGCTTGATGCCCTCCCGCGCACCGCAGGCCTaGACTGGTGGCGGGCCCAGGGGGTGGGGTCGCAAAGTTCCTGCC +
Preference number: 1 (lower is better)
Translates to: AEEASRLMPSRAPQA*TGGGPRGWGRKVPA
Trigger: GGCAGGAACTTTGCGACCCCACCCCCTGGGCCCGCCACCAGTTCAGGCCTGCGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp AGGCCATCAGCCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTaGTGCAGGAAGGCGCCGCCTCCACCGCCGCTGAACACGCAGTGG +
Preference number: 1 (lower is better)
Translates to: RPSAAGTAPWRAACS*CRKAPPPPPLNTQW
Trigger: CCACTGCGTGTTCAGCGGCGGTGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp GGCCTCGCGCTTGATGCCCTCCCGCGCACCGCAGGCCTGAACTGGTaGCGGGCCCAGGGGGTGGGGTCGCAAAGTTCCTGCCTGGGAAGG +
Preference number: 1 (lower is better)
Translates to: GLALDALPRTAGLNW*RAQGVGSQSSCLGR
Trigger: CCTTCCCAGGCAGGAACTTTGCGACCCCACCCCCTGGGCCCGCCACCAGTTCAGGCCTGCGGTGCGCGGGAGGGCATCAAGCGCGAGGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp CTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCCTTaGCCTTCTTGGGCTGCCCCCACTTGCCTGGGGTCGGCGAGGTGG +
Preference number: 1 (lower is better)
Translates to: LGRLRSCPGHGPAAP*PSWAAPTCLGSARW
Trigger: CCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCAGCTGGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp GGTTTTGGGGAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTTaGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCCTCCACCG +
Preference number: 1 (lower is better)
Translates to: GFGERPRPSAAGTAP*RAACSWCRKAPPPP
Trigger: CGGTGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp AGTTCCTGCCTGGGAAGGCGCGGCGAAATCGGGCGCCGGGGGTTTTaGGGAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTTGGCG +
Preference number: 1 (lower is better)
Translates to: SSCLGRRGEIGRRGF*GETEAISRWDGALA
Trigger: CGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCCGATTTCGCCGCGCCTTCCCAGGCAGGAACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp AGAGGCCTCGCGCTTGATGCCCTCCCGCGCACCGCAGGCCTGAACTaGTGGCGGGCCCAGGGGGTGGGGTCGCAAAGTTCCTGCCTGGGA +
Preference number: 1 (lower is better)
Translates to: RGLALDALPRTAGLN*WRAQGVGSQSSCLG
Trigger: TCCCAGGCAGGAACTTTGCGACCCCACCCCCTGGGCCCGCCACCAGTTCAGGCCTGCGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp ACGGTCCAGCTGCTCCTTGCCCTTCTTGGGCTGCCCCCACTTGCCTaGGGTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTT +
Preference number: 1 (lower is better)
Translates to: TVQLLLALLGLPPLA*GRRGGRGRGRGLAL
Trigger: AAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCAGCTGGACCGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp CTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCCTTGCCCTTCTTaGGCTGCCCCCACTTGCCTGGGGTCGGCGAGGTGGCCGAGGGCG +
Preference number: 1 (lower is better)
Translates to: LRSCPGHGPAAPCPS*AAPTCLGSARWPRA
Trigger: CGCCCTCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCAGCTGGACCGTGCCCTGGACATGAGCGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp GCACCCGGGCCGTCGCCCGCTTTGGCGAGCAGACTCTGGCCAGGGTaGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGGCGCACAAGT +
Preference number: 1 (lower is better)
Translates to: APGPSPALASRLWPG*RDLTCRSRSRRRTS
Trigger: ACTTGTGCGCCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGGCCCGGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp CCATCAGCCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTaGAGGAAGGCGCCGCCTCCACCGCCGCTGAACACGCAGTGGAAA +
Preference number: 1 (lower is better)
Translates to: PSAAGTAPWRAACSW*RKAPPPPPLNTQWK
Trigger: TTTCCACTGCGTGTTCAGCGGCGGTGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp CTCATGTCCAGGGCACGGTCCAGCTGCTCCTTGCCCTTCTTGGGCTaGCCCCACTTGCCTGGGGTCGGCGAGGTGGCCGAGGGCGCGGAA +
Preference number: 1 (lower is better)
Translates to: LMSRARSSCSLPFLG*PHLPGVGEVAEGAE
Trigger: TTCCGCGCCCTCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCAGCTGGACCGTGCCCTGGACATGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp GGTAGAAAGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATaGCGAGGAAGTGCCCTTGTCCTCGGGCGGCTCCGCTCATGTCCA +
Preference number: 1 (lower is better)
Translates to: GRKPGCRPPPRSRPR*RGSALVLGRLRSCP
Trigger: TGGACATGAGCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCTTTCTACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 90 bp GCGACCCCAGCTCGGCGGGGCTTAGGGCGGCCGCTGCAGGCCCGCTaGAGTAGGAGATGGACTCCGGATACTTCAGCAGCCCGCCGAAGT +
Preference number: 1 (lower is better)
Translates to: ATPARRGLGRPLQAR*SRRWTPDTSAARRS
Trigger: ACTTCGGCGGGCTGCTGAAGTATCCGGAGTCCATCTCCTACTTCAGCGGGCCTGCAGCGGCCGCCCTAAGCCCCGCCGAGCTGGGGTCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 90 bp CGTCGCCCGCTTTGGCGAGCAGACTCTGGCCAGGGTGGCGGGACTTaGCATGTCGCTCCAGGTCCCGGCGGCGCACAAGTACCTTGCCGC +
Preference number: 1 (lower is better)
Translates to: RRPLWRADSGQGGGT*HVAPGPGGAQVPCR
Trigger: GCGGCAAGGTACTTGTGCGCCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAAAGCGGGCGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp CCATCTCGGACAGCTGCTGATTGTGCATGGCGATCTCTCGGTCGATaGTGGCCAGCGACCCCAGCTCGGCGGGGCTTAGGGCGGCCGCTG +
Preference number: 1 (lower is better)
Translates to: PSRTAADCAWRSLGR*WPATPARRGLGRPL
Trigger: CAGCGGCCGCCCTAAGCCCCGCCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACAATCAGCAGCTGTCCGAGATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp TCTCGGACAGCTGCTGATTGTGCATGGCGATCTCTCGGTCGATGCTaGCCAGCGACCCCAGCTCGGCGGGGCTTAGGGCGGCCGCTGCAG +
Preference number: 1 (lower is better)
Translates to: SRTAADCAWRSLGRC*PATPARRGLGRPLQ
Trigger: CTGCAGCGGCCGCCCTAAGCCCCGCCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACAATCAGCAGCTGTCCGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp CGCGACCCTTCCCGGCAGCCATCTCGGACAGCTGCTGATTGTGCATaGCGATCTCTCGGTCGATGCTGGCCAGCGACCCCAGCTCGGCGG +
Preference number: 1 (lower is better)
Translates to: RDPSRQPSRTAADCA*RSLGRCWPATPARR
Trigger: CCGCCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACAATCAGCAGCTGTCCGAGATGGCTGCCGGGAAGGGTCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 90 bp TCCAGGCGTCCGCGACCCTTCCCGGCAGCCATCTCGGACAGCTGCTaGTTGTGCATGGCGATCTCTCGGTCGATGCTGGCCAGCGACCCC +
Preference number: 1 (lower is better)
Translates to: SRRPRPFPAAISDSC*LCMAISRSMLASDP
Trigger: GGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACAATCAGCAGCTGTCCGAGATGGCTGCCGGGAAGGGTCGCGGACGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 90 bp GGCGCCGCCTCCACCGCCGCTGAACACGCAGTGGAAACGCAGGTGTaGCTTAAGGCTGTTGGGGTATCTAAACGTCCTCCAGCAGTACCA +
Preference number: 1 (lower is better)
Translates to: GAASTAAEHAVETQV*LKAVGVSKRPPAVP
Trigger: TGGTACTGCTGGAGGACGTTTAGATACCCCAACAGCCTTAAGGCACACCTGCGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCGGCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 90 bp TCGTGGTGCAGGAAGGCGCCGCCTCCACCGCCGCTGAACACGCAGTaGAAACGCAGGTGTGCCTTAAGGCTGTTGGGGTATCTAAACGTC +
Preference number: 1 (lower is better)
Translates to: SWCRKAPPPPPLNTQ*KRRCALRLLGYLNV
Trigger: GACGTTTAGATACCCCAACAGCCTTAAGGCACACCTGCGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCGGCGCCTTCCTGCACCACGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 90 bp CCCGCCGAAGTGCAATTTGAGCGGGTAATAAGCGGTGGTGGCCGGTaGGCCGTAGAGCAGCTCCCCGTTGTAGACTGTAAAGGCCGGCAT +
Preference number: 1 (lower is better)
Translates to: PAEVQFERVISGGGR*AVEQLPVVDCKGRH
Trigger: ATGCCGGCCTTTACAGTCTACAACGGGGAGCTGCTCTACGGCTCACCGGCCACCACCGCTTATTACCCGCTCAAATTGCACTTCGGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 90 bp AGGAGATGGACTCCGGATACTTCAGCAGCCCGCCGAAGTGCAATTTaGGCGGGTAATAAGCGGTGGTGGCCGGTGAGCCGTAGAGCAGCT +
Preference number: 1 (lower is better)
Translates to: RRWTPDTSAARRSAI*AGNKRWWPVSRRAA
Trigger: AGCTGCTCTACGGCTCACCGGCCACCACCGCTTATTACCCGCTCAAATTGCACTTCGGCGGGCTGCTGAAGTATCCGGAGTCCATCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 90 bp CTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCTCTaGACTGTTGCTCTGAGTTTCAGCACCAGATGTGGGACCTCTCAC +
Preference number: 1 (lower is better)
Translates to: LVALELSRWPDLRHL*TVALSFSTRCGTSH
Trigger: GTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR GCA 90 bp ACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTaGTCTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAA +
Preference number: 1 (lower is better)
Translates to: TRALQVARFTPPLNC*SEFQHQMWDLSLFQ
Trigger: TTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR TCA 90 bp AGCTCTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTaGGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTG +
Preference number: 1 (lower is better)
Translates to: SSPGGQIYATSELLL*VSAPDVGPLTVSNL
Trigger: CAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR CCA 90 bp TTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACCAGATGTaGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAA +
Preference number: 1 (lower is better)
Translates to: FTPPLNCCSEFQHQM*DLSLFQIWRPLKNK
Trigger: TTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR-3UTR CCA 90 bp GTGCCTCCCGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGCGCATAACGCGCTCCTaGCAGCGCGGCGGCTGCGGG +
Preference number: 2 (lower is better)
Translates to: VPPAAATAGGNVPESRRPRITRS*QRGGCG
Trigger: CCCGCAGCCGCCGCGCTGCCAGGAGCGCGTTATGCG...CGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCGGGAGGCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp CGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGCGACCCTTGCAGGCCTGAACTGGTaGCGGGCCCAGGGGGTGGGG +
Preference number: 2 (lower is better)
Translates to: RRRDGRWQRPRVQASATLAGLNW*RAQGVG
Trigger: CCCCACCCCCTGGGCCCGCCACCAGTTCAGGCCTGC...AAGGGTCGCGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR TCA 90 bp GTGCCTCCCGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGCCGCTGCAGGCCCGCTaGAGTAGGAGATGGACTCCG +
Preference number: 2 (lower is better)
Translates to: VPPAAATAGGNVPESRRPPLQAR*SRRWTP
Trigger: CGGAGTCCATCTCCTACTTCAGCGGGCCTGCAGCGG...CGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCGGGAGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCGGCGGGCCCAGGGGGTaGGGTCGCAAAGTTCCTGCC +
Preference number: 2 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPGGPRG*GRKVPA
Trigger: GGCAGGAACTTTGCGACCCCACCCCCTGGGCCCGCC...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp CGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTCGGGCTGGGGTCGGCGAGGTaGCCGAGGGCGCGGAAGAGG +
Preference number: 2 (lower is better)
Translates to: RPPPRSRPRCRGSALVLGLGSAR*PRARKR
Trigger: CCTCTTCCGCGCCCTCGGCCACCTCGCCGACCCCAG...CCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 90 bp GCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTaGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCCAGCTG +
Preference number: 2 (lower is better)
Translates to: ADPRRGAAHDAEEVP*SSGGSAHVQGTVQL
Trigger: CAGCTGGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR GCA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCGCCGCGTGTTCGTGGTaGAGGAAGGCGCCGCCTCCA +
Preference number: 2 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPAACSW*RKAPPP
Trigger: TGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGC...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 90 bp AGGGCACGGTCCAGCTGCTCCTTGCCCTTCTTGGGCTGCCCCCACTaGCCTGGGGTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCG +
Preference number: 2 (lower is better)
Translates to: RARSSCSLPFLGCPH*PGVGEVAEGAEEAS
Trigger: CGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCAGCTGGACCGTGCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 90 bp GGGTTTTGGGGAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTaGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCCTCCACC +
Preference number: 2 (lower is better)
Translates to: GFWGETEAISRWDGA*ASRVFVVQEGAAST
Trigger: GGTGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 90 bp GCTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCCTTGCCCTTCTaGGGCTGCCCCCACTTGCCTGGGGTCGGCGAGGTGGCCGAGGGC +
Preference number: 2 (lower is better)
Translates to: APLMSRARSSCSLPF*GCPHLPGVGEVAEG
Trigger: GCCCTCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCAGCTGGACCGTGCCCTGGACATGAGCGGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 90 bp AAGTTCCTGCCTGGGAAGGCGCGGCGAAATCGGGCGCCGGGGGTTTaGGGGAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTTGGC +
Preference number: 2 (lower is better)
Translates to: KFLPGKARRNRAPGV*GRDRGHQPLGRRLG
Trigger: GCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCCGATTTCGCCGCGCCTTCCCAGGCAGGAACTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR TCA 90 bp CCCAGCAGCCTGCCCAAAGCGAGGCCGGCTCCTTGCTTGCTGCTGCTCTCCTCCAAGAGGCCTCGCGCTTaGTGCCCTCCCGCGCACCGC +
Preference number: 2 (lower is better)
Translates to: PSSLPKARPAPCLLLLSSKRPRA*CPPAHR
Trigger: GCGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTT...GGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCTTTGGGCAGGCTGCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp GAGCAGACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGGAGGCCATCAGCCGCTaGGACGGCGCCTTGGCGAGC +
Preference number: 2 (lower is better)
Translates to: EQTLARVAGLDMSLQVPAEAISR*DGALAS
Trigger: GCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTC...CGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 90 bp CCGTCGCCCGCTTTGGCGAGCAGACTCTGGCCAGGGTGGCGGGACTaGACATGTCGCTCCAGGTCCCGGCGGCGCACAAGTACCTTGCCG +
Preference number: 2 (lower is better)
Translates to: PSPALASRLWPGWRD*TCRSRSRRRTSTLP
Trigger: CGGCAAGGTACTTGTGCGCCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTCGGAGTCGCTGTGGTaGGGATGTCGAACCACTGAG +
Preference number: 2 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPSESLW*GCRTTE
Trigger: CTCAGTGGTTCGACATCCCCACCACAGCGACTCCGA...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp CCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCGAGTCGGAGTCGCTGTaGTGGGGATGTCGAACCACT +
Preference number: 2 (lower is better)
Translates to: PLGRRLGEPRVRGAGRRRESESL*WGCRTT
Trigger: AGTGGTTCGACATCCCCACCACAGCGACTCCGACTC...GCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR TCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACAGCGGTGGTGGCCGGTaGGCCGTAGAGCAGCTCCCC +
Preference number: 2 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYSGGGR*AVEQLP
Trigger: GGGGAGCTGCTCTACGGCTCACCGGCCACCACCGCT...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR GCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGGTAGAAAGCCAGGCTaGCGACCCCCGCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYGRKPG*RPPPRS
Trigger: GCTCCTCGGCGGGGGTCGGCAGCCTGGCTTTCTACC...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp CCCAGCAGCCTGCCCAAAGCGAGGCCGGCTCCTTGCTTGCTGCTGCTCTCCTCCCGCAAAGTTCCTGCCTaGGAAGGCGCGGCGAAATCG +
Preference number: 2 (lower is better)
Translates to: PSSLPKARPAPCLLLLSSRKVPA*EGAAKS
Trigger: CGATTTCGCCGCGCCTTCCCAGGCAGGAACTTTGCG...GGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCTTTGGGCAGGCTGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR TCA 90 bp CTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGGCTTCGCGCTCCACGTGCTTaGAGGCGGACGCCTCTTCCG +
Preference number: 2 (lower is better)
Translates to: LARVQLATVEAQVAGLGLRAPRA*RRTPLP
Trigger: CGGAAGAGGCGTCCGCCTTCAAGCACGTGGAGCGCG...AAGCCCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR GCA 90 bp GGGTCGCTCTGGTCGTCTGTGAAGCAGACGTCCACGTCACTGTCGTCGCTCTTGCGGCGGGCAGGTGGCTaGACTCACCACCCGGATAGG +
Preference number: 2 (lower is better)
Translates to: GSLWSSVKQTSTSLSSLLRRAGG*THHPDR
Trigger: CCTATCCGGGTGGTGAGTGCAGCCACCTGCCCGCCG...CAAGAGCGACGACAGTGACGTGGACGTCTGCTTCACAGACGACCAGAGCGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR GCA 90 bp TGTGCATGGCGATCTCTCGGTCGATGCTGGCCAGCGACCCCAGCTCGGCGGGGCGTGGAAACGCAGGTGTaGCTTAAGGCTGTTGGGGTA +
Preference number: 2 (lower is better)
Translates to: CAWRSLGRCWPATPARRGVETQV*LKAVGV
Trigger: TACCCCAACAGCCTTAAGGCACACCTGCGTTTCCAC...GCCCCGCCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR GCA 90 bp GTAGAGCAGCTCCCCGTTGTAGACTGTAAAGGCCGGCATGACGGCGGGCAGGTGTTGCCCTTCTTGGGCTaGCCCCACTTGCCTGGGGTC +
Preference number: 2 (lower is better)
Translates to: VEQLPVVDCKGRHDGGQVLPFLG*PHLPGV
Trigger: GACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAA...CACCTGCCCGCCGTCATGCCGGCCTTTACAGTCTACAACGGGGAGCTGCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR GCA 90 bp CTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGGCTTCGATCTCTCGGTCGATaGTGGCCAGCGACCCCAGCT +
Preference number: 2 (lower is better)
Translates to: LARVQLATVEAQVAGLGLRSLGR*WPATPA
Trigger: AGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCG...AAGCCCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR GCA 90 bp CATACTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGGGGTCGCAAAGTTCCTaGCTGGGAAGGCGCGGCGAA +
Preference number: 2 (lower is better)
Translates to: HTCASTACHSRGTGGRSWGSQSS*LGRRGE
Trigger: TTCGCCGCGCCTTCCCAGGCAGGAACTTTGCGACCC...CCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAGTATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR TCA 90 bp AGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGCGCCTCCACCGCCGCTaGACACGCAGTGGAAACGCA +
Preference number: 2 (lower is better)
Translates to: RSSSTARINPRLLSVLTPRLHRR*TRSGNA
Trigger: TGCGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCG...CGGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACGGGCGCCGGGGGTTTTaGGGAGAGACCGAGGCCATC +
Preference number: 2 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNGRRGF*GETEAI
Trigger: GATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCC...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp CGTCCGCATGTGGATCTTGAGCCCATACTTGCGCGAGTACAGCTTGCCACAGTAAGCAGGCACTTGGGATaGTGGTGGTGGTGCGCGTGG +
Preference number: 2 (lower is better)
Translates to: RPHVDLEPILARVQLATVSRHLG*WWWCAW
Trigger: CCACGCGCACCACCACCACCATCCCAAGTGCCTGCT...TACTGTGGCAAGCTGTACTCGCGCAAGTATGGGCTCAAGATCCACATGCGGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCACAGGTGGCCGGTCTTaGGCTTACCTGCGCCGCTGC +
Preference number: 2 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTTGGRS*AYLRRC
Trigger: GCAGCGGCGCAGGTAAGCCCAAGACCGGCCACCTGT...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR TCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACTCTGAACTGTTGCTCTaGGTTTCAGCACCAGATGTG +
Preference number: 2 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYSELLL*VSAPDV
Trigger: CACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGA...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR-3UTR CCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAGACTCTGGCCAGGGTaGCGGGACTTGACATGTCGC +
Preference number: 2 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNRLWPG*RDLTCR
Trigger: GCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCT...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACGGTAATAAGCGGTGGTaGCCGGTGAGCCGTAGAGCA +
Preference number: 2 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNGNKRW*PVSRRA
Trigger: TGCTCTACGGCTCACCGGCCACCACCGCTTATTACC...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGGCTGGGACGGCGCCTTaGCGAGCCGCGTGTTCGTGG +
Preference number: 2 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMAGTAP*RAACSW
Trigger: CCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGC...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR TCA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTTCCCCTTTCTCGTCGTaGGTCGGAGTCGCTGTGGTG +
Preference number: 2 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLSPFSS*VGVAVV
Trigger: CACCACAGCGACTCCGACTCACGACGAGAAAGGGGA...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCTCACTGTTTCAAATCTaGCGCCCTCTCAAAAACAAA +
Preference number: 2 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTSLFQI*RPLKNK
Trigger: TTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGA...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR-3UTR CAA 90 bp GTGCCTCCCGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGGCGCGCTCCACGTGCTaGAAGGCGGACGCCTCTTCC +
Preference number: 3 (lower is better)
Translates to: VPPAAATAGGNVPESRRPARSTC*KADASS
Trigger: GGAAGAGGCGTCCGCCTTCAAGCACGTGGAGCGCGC...CGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCGGGAGGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 72 bp CCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATaGCGAGGAAGTGCCCTTGTCCTCGGGCGGCTCCGC +
Preference number: 3 (lower is better)
Translates to: PGCRPPPRSRPR*RGSALVLGRLR
Trigger: GCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 72 bp TGGTGGCGGGCCCAGGGGGTGGGGTCGCAAAGTTCCTaGCTGGGAAGGCGCGGCGAAATCGGGCGCCGGGGG +
Preference number: 3 (lower is better)
Translates to: WWRAQGVGSQSS*LGRRGEIGRRG
Trigger: CCCCCGGCGCCCGATTTCGCCGCGCCTTCCCAGGCAGGAACTTTGCGACCCCACCCCCTGGGCCCGCCACCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp GCCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTaGTGCAGGAAGGCGCCGCCTCCACCGCCGCTGAAC +
Preference number: 3 (lower is better)
Translates to: AAGTAPWRAACS*CRKAPPPPPLN
Trigger: GTTCAGCGGCGGTGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp GCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTaGTGCCCTCCCGCGCACCGCAGGCCTGAACTGGTG +
Preference number: 3 (lower is better)
Translates to: ARWPRARKRPRA*CPPAHRRPELV
Trigger: CACCAGTTCAGGCCTGCGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp CGGGCAGGTGGCTGCACTCACCACCCGGATAGGCTTTaGGACCGCCCGGGTCGAGGGGCGGCAGCGCGCAGC +
Preference number: 3 (lower is better)
Translates to: RAGGCTHHPDRL*DRPGRGAAARS
Trigger: GCTGCGCGCTGCCGCCCCTCGACCCGGGCGGTCTCAAAGCCTATCCGGGTGGTGAGTGCAGCCACCTGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 72 bp GCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTaGAGGAAGGCGCCGCCTCCACCGCCGCTGAACACG +
Preference number: 3 (lower is better)
Translates to: AGTAPWRAACSW*RKAPPPPPLNT
Trigger: CGTGTTCAGCGGCGGTGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 72 bp ACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTaGCCTTGTCCTCGGGCGGCTCCGCTCATGTCCAGG +
Preference number: 3 (lower is better)
Translates to: TPAEEPPTMPRK*PCPRAAPLMSR
Trigger: CCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 72 bp GCCTGCCCAAAGCGAGGCCGGCTCCTTGCTTGCTGCTaGTCTCCTCCCGGTAGGGGTCGCCGTGAGCGGCCG +
Preference number: 3 (lower is better)
Translates to: ACPKRGRLLACC*SPPGRGRRERP
Trigger: CGGCCGCTCACGGCGACCCCTACCGGGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCTTTGGGCAGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp GAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTTaGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCG +
Preference number: 3 (lower is better)
Translates to: ERPRPSAAGTAP*RAACSWCRKAP
Trigger: CGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp CTGGGAAGGCGCGGCGAAATCGGGCGCCGGGGGTTTTaGGGAGAGACCGAGGCCATCAGCCGCTGGGACGGC +
Preference number: 3 (lower is better)
Translates to: LGRRGEIGRRGF*GETEAISRWDG
Trigger: GCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCCGATTTCGCCGCGCCTTCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp GCGCTTGATGCCCTCCCGCGCACCGCAGGCCTGAACTaGTGGCGGGCCCAGGGGGTGGGGTCGCAAAGTTCC +
Preference number: 3 (lower is better)
Translates to: ALDALPRTAGLN*WRAQGVGSQSS
Trigger: GGAACTTTGCGACCCCACCCCCTGGGCCCGCCACCAGTTCAGGCCTGCGGTGCGCGGGAGGGCATCAAGCGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp CTGCTCCTTGCCCTTCTTGGGCTGCCCCCACTTGCCTaGGGTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGC +
Preference number: 3 (lower is better)
Translates to: LLLALLGLPPLA*GRRGGRGRGRG
Trigger: GCCTCTTCCGCGCCCTCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp ACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGGCGCACCGGGCGCCGGGGGTTTaGGGGAGAGACCGAGGCCAT +
Preference number: 3 (lower is better)
Translates to: TLARVAGLDMSLQVPAAHRAPGV*GRDRGH
Trigger: ATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCCG...GTGCGCCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp CTTGATGCCCTCCCGCGCACCGCAGGCCTGAACTGGTaGCGGGCCCAGGGGGTGGGGTCGCAAAGTTCCTGC +
Preference number: 3 (lower is better)
Translates to: LDALPRTAGLNW*RAQGVGSQSSC
Trigger: GCAGGAACTTTGCGACCCCACCCCCTGGGCCCGCCACCAGTTCAGGCCTGCGGTGCGCGGGAGGGCATCAAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp CCGTCGCCCGCTTTGGCGAGCAGACTCTGGCCAGGGTaGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGG +
Preference number: 3 (lower is better)
Translates to: PSPALASRLWPG*RDLTCRSRSRR
Trigger: CCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp GCACCCGGGCCGTCGCCCGCTTTGGCGAGCAGACTCTaGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: APGPSPALASRL*PGWRDLTCRSR
Trigger: CCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGGCCCGGGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACCGCTGGGACGGCGCCTaGGCGAGCCGCGTGTTCGTG +
Preference number: 3 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYRWDGA*ASRVFV
Trigger: CACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCG...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 72 bp CCAGCAGCCTGCCCAAAGCGAGGCCGGCTCCTTGCTTaGTGCTGCTCTCCTCCCGGTAGGGGTCGCCGTGAG +
Preference number: 3 (lower is better)
Translates to: PAACPKRGRLLA*CCSPPGRGRRE
Trigger: CTCACGGCGACCCCTACCGGGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCTTTGGGCAGGCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp GCTCGGCGGGGCTTAGGGCGGCCGCTGCAGGCCCGCTaGAGTAGGAGATGGACTCCGGATACTTCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: ARRGLGRPLQAR*SRRWTPDTSAA
Trigger: GGCTGCTGAAGTATCCGGAGTCCATCTCCTACTTCAGCGGGCCTGCAGCGGCCGCCCTAAGCCCCGCCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp GCTGCTGATTGTGCATGGCGATCTCTCGGTCGATGCTaGCCAGCGACCCCAGCTCGGCGGGGCTTAGGGCGG +
Preference number: 3 (lower is better)
Translates to: AADCAWRSLGRC*PATPARRGLGR
Trigger: CCGCCCTAAGCCCCGCCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACAATCAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp CGCCGCCCCCAACCTCGGGGTCGCTCTGGTCGTCTGTaGAGCAGACGTCCACGTCACTGTCGTCGCTCTTGG +
Preference number: 3 (lower is better)
Translates to: RRPQPRGRSGRL*SRRPRHCRRSW
Trigger: CCAAGAGCGACGACAGTGACGTGGACGTCTGCTTCACAGACGACCAGAGCGACCCCGAGGTTGGGGGCGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp GGGTCGCTCTGGTCGTCTGTGAAGCAGACGTCCACGTCACTGTCGTCGCTCTTGGCCGAGGAAGTGCCCTaGTCCTCGGGCGGCTCCGCT +
Preference number: 3 (lower is better)
Translates to: GSLWSSVKQTSTSLSSLLAEEVP*SSGGSA
Trigger: AGCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGC...CAAGAGCGACGACAGTGACGTGGACGTCTGCTTCACAGACGACCAGAGCGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp CCGCGACCCTTCCCGGCAGCCATCTCGGACAGCTGCTaGTTGTGCATGGCGATCTCTCGGTCGATGCTGGCC +
Preference number: 3 (lower is better)
Translates to: PRPFPAAISDSC*LCMAISRSMLA
Trigger: GGCCAGCATCGACCGAGAGATCGCCATGCACAATCAGCAGCTGTCCGAGATGGCTGCCGGGAAGGGTCGCGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp CTTTGGCGAGCAGACTCTGGCCAGGGTGGCGGGACTTaGCATGTCGCTCCAGGTCCCGGCGGCGCACAAGTA +
Preference number: 3 (lower is better)
Translates to: LWRADSGQGGGT*HVAPGPGGAQV
Trigger: TACTTGTGCGCCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAAAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 72 bp CATGTCGCTCCAGGTCCCGGCGGCGCACAAGTACCTTaGCGCAGAACTCGCAGCGGTAGGGCGTATTGCCCT +
Preference number: 3 (lower is better)
Translates to: HVAPGPGGAQVP*RRTRSGRAYCP
Trigger: AGGGCAATACGCCCTACCGCTGCGAGTTCTGCGGCAAGGTACTTGTGCGCCGCCGGGACCTGGAGCGACATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp TCCCGGCAGCCATCTCGGACAGCTGCTGATTGTGCATaGCGATCTCTCGGTCGATGCTGGCCAGCGACCCCA +
Preference number: 3 (lower is better)
Translates to: SRQPSRTAADCA*RSLGRCWPATP
Trigger: TGGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACAATCAGCAGCTGTCCGAGATGGCTGCCGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp CAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTaGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCC +
Preference number: 3 (lower is better)
Translates to: QEVQRPGVRRYW*HSSSPGGQIYA
Trigger: GGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR-3UTR CAA 90 bp GTAGAGCAGCTCCCCGTTGTAGACTGTAAAGGCCGGCATGACGGCGGGCAGGTGTGCTCCTTGCCCTTCTaGGGCTGCCCCCACTTGCCT +
Preference number: 3 (lower is better)
Translates to: VEQLPVVDCKGRHDGGQVCSLPF*GCPHLP
Trigger: AGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCA...CACCTGCCCGCCGTCATGCCGGCCTTTACAGTCTACAACGGGGAGCTGCTCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp GGGTCGCTCTGGTCGTCTGTGAAGCAGACGTCCACGTCACTGTCGTCGCTCTTGCCAGCGAGCAGGCACTaGGGATGGTGGTGGTGGTGC +
Preference number: 3 (lower is better)
Translates to: GSLWSSVKQTSTSLSSLLPASRH*GWWWWC
Trigger: GCACCACCACCACCATCCCAAGTGCCTGCTCGCTGG...CAAGAGCGACGACAGTGACGTGGACGTCTGCTTCACAGACGACCAGAGCGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp AGGAAGGCGCCGCCTCCACCGCCGCTGAACACGCAGTaGAAACGCAGGTGTGCCTTAAGGCTGTTGGGGTAT +
Preference number: 3 (lower is better)
Translates to: RKAPPPPPLNTQ*KRRCALRLLGY
Trigger: ATACCCCAACAGCCTTAAGGCACACCTGCGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCGGCGCCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCGCTAGGCCGGCGGGCTaGAAAGCTGAGCGCACGCCG +
Preference number: 3 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTARPAG*KAERTP
Trigger: CGGCGTGCGCTCAGCTTTCAAGCCCGCCGGCCTAGC...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp GGGTCGCTCTGGTCGTCTGTGAAGCAGACGTCCACGTCACTGTCGTCGCTCTTGAGCCGGATGTGCTTGTaGAGATTGCTGGGGTCGCCG +
Preference number: 3 (lower is better)
Translates to: GSLWSSVKQTSTSLSSLLSRMCL*RLLGSP
Trigger: CGGCGACCCCAGCAATCTCAACAAGCACATCCGGCT...CAAGAGCGACGACAGTGACGTGGACGTCTGCTTCACAGACGACCAGAGCGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCGGGCCGTCGCCCGCTTaGGCGAGCAGACTCTGGCCA +
Preference number: 3 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTGPSPA*ASRLWP
Trigger: TGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGGCCC...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CCA 72 bp ATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTaGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTAC +
Preference number: 3 (lower is better)
Translates to: IQEVQRPGVRRY*WHSSSPGGQIY
Trigger: GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR-3UTR CAA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACGAAGAGGCCTCGCGCTaGATGCCCTCCCGCGCACCG +
Preference number: 3 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNEEASR*MPSRAP
Trigger: CGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTTC...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp ACTCCGGATACTTCAGCAGCCCGCCGAAGTGCAATTTaGGCGGGTAATAAGCGGTGGTGGCCGGTGAGCCGT +
Preference number: 3 (lower is better)
Translates to: TPDTSAARRSAI*AGNKRWWPVSR
Trigger: ACGGCTCACCGGCCACCACCGCTTATTACCCGCTCAAATTGCACTTCGGCGGGCTGCTGAAGTATCCGGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp AGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGGTCCGCATGTGGATCTaGAGCCCATACTTGCGCGAG +
Preference number: 3 (lower is better)
Translates to: RSSSTARINPRLLSVLTPVRMWI*SPYLRE
Trigger: CTCGCGCAAGTATGGGCTCAAGATCCACATGCGGAC...CGGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR GCA 72 bp TCCACCGCCGCTGAACACGCAGTGGAAACGCAGGTGTaGCTTAAGGCTGTTGGGGTATCTAAACGTCCTCCA +
Preference number: 3 (lower is better)
Translates to: STAAEHAVETQV*LKAVGVSKRPP
Trigger: TGGAGGACGTTTAGATACCCCAACAGCCTTAAGGCACACCTGCGTTTCCACTGCGTGTTCAGCGGCGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp GTGCAATTTGAGCGGGTAATAAGCGGTGGTGGCCGGTaGGCCGTAGAGCAGCTCCCCGTTGTAGACTGTAAA +
Preference number: 3 (lower is better)
Translates to: VQFERVISGGGR*AVEQLPVVDCK
Trigger: TTTACAGTCTACAACGGGGAGCTGCTCTACGGCTCACCGGCCACCACCGCTTATTACCCGCTCAAATTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR-3UTR CAA 90 bp CGTCCGCATGTGGATCTTGAGCCCATACTTGCGCGAGTACAGCTTGCCACAGTATGTGCCTTAAGGCTGTaGGGGTATCTAAACGTCCTC +
Preference number: 3 (lower is better)
Translates to: RPHVDLEPILARVQLATVCALRL*GYLNVL
Trigger: GAGGACGTTTAGATACCCCAACAGCCTTAAGGCACA...TACTGTGGCAAGCTGTACTCGCGCAAGTATGGGCTCAAGATCCACATGCGGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR TCA 72 bp GGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTaGGTTTCAGCACCAGATGTGGGACCTCTCACTGTT +
Preference number: 3 (lower is better)
Translates to: GGQIYATSELLL*VSAPDVGPLTV
Trigger: AACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR CCA 72 bp CCTCTGAACTGTTGCTCTGAGTTTCAGCACCAGATGTaGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTC +
Preference number: 3 (lower is better)
Translates to: PLNCCSEFQHQM*DLSLFQIWRPL
Trigger: GAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR-3UTR CAA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGAAACGGTTTTGTCCATaGGGTCCCTCTTCCCACCAC +
Preference number: 3 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKEKRFCP*GPSSHH
Trigger: GTGGTGGGAAGAGGGACCCAATGGACAAAACCGTTT...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR GCA 72 bp CTCATAAATAATTGCAACTTGACCAATTTGTACACCTaGTACCACTATATATTCAATGGGGCAAGGAGTAGT +
Preference number: 3 (lower is better)
Translates to: LINNCNLTNLYT*YHYIFNGARSS
Trigger: ACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTGCAATTATTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp GTGCCTCCCGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGCCTCCGCCCGCGGAGTaGCGCGGGCGGGCATGCACT +
Preference number: 4 (lower is better)
Translates to: VPPAAATAGGNVPESRRPPPPAE*RGRACT
Trigger: AGTGCATGCCCGCCCGCGTCACTCCGCGGGCGGAGG...CGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCGGGAGGCAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp GTGCCTCCCGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGAGCGGTAGGGCGTATTaGCCTCGGCGTGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: VPPAAATAGGNVPESRRPSGRAY*PRRAAG
Trigger: TCCGGCTGCACGCCGAGGGCAATACGCCCTACCGCT...CGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCGGGAGGCAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTCGGGCGCCGCGACGGCCGGTaGCAACGTCCCCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RPPPRSRPRCRGSALVLGRRDGR*QRPRVQ
Trigger: CTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCG...CCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCCACCCGGATAGGCTTTaGGACCGCCCGGGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPHPDRL*DRPGRG
Trigger: CCCTCGACCCGGGCGGTCTCAAAGCCTATCCGGGTG...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp GTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTGATGCCCTCCCGCGGGGCGCGCTCCACGTaGTTGAAGGCGGACGCCTCT +
Preference number: 4 (lower is better)
Translates to: VGEVAEGAEEASRLMPSRGARST*LKADAS
Trigger: AGAGGCGTCCGCCTTCAAGCACGTGGAGCGCGCCCC...GCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCCGGCGGGCAGGTGGCTaGACTCACCACCCGGATAGG +
Preference number: 4 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPRRAGG*THHPDR
Trigger: CCTATCCGGGTGGTGAGTGCAGCCACCTGCCCGCCG...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp CCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCCCGCTGCAGGCCCGCTaGAGTAGGAGATGGACTCCG +
Preference number: 4 (lower is better)
Translates to: PLGRRLGEPRVRGAGRRRPLQAR*SRRWTP
Trigger: CGGAGTCCATCTCCTACTTCAGCGGGCCTGCAGCGG...GCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp CCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCGCGAGGCCGGCTCCTTaGTTGCTGCTGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLGRRLGEPRVRGAGRRRARPAP*LLLLSS
Trigger: GGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGC...GCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp ACCCGGATAGGCTTTGAGACCGCCCGGGTCGAGGGGCGGCAGCGCGCAGCGCTCGGGCGCCGGGGGTTTTaGGGAGAGACCGAGGCCATC +
Preference number: 4 (lower is better)
Translates to: TRIGFETARVEGRQRAALGRRGF*GETEAI
Trigger: GATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCC...GAGCGCTGCGCGCTGCCGCCCCTCGACCCGGGCGGTCTCAAAGCCTATCCGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTGATGCCCTCCCGCATGACGGCGGGCAGGTaGCTGCACTCACCACCCGGA +
Preference number: 4 (lower is better)
Translates to: VGEVAEGAEEASRLMPSRMTAGR*LHSPPG
Trigger: TCCGGGTGGTGAGTGCAGCCACCTGCCCGCCGTCAT...GCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 72 bp GGAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTaGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCC +
Preference number: 4 (lower is better)
Translates to: GETEAISRWDGA*ASRVFVVQEGA
Trigger: GGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 72 bp CCTGGGAAGGCGCGGCGAAATCGGGCGCCGGGGGTTTaGGGGAGAGACCGAGGCCATCAGCCGCTGGGACGG +
Preference number: 4 (lower is better)
Translates to: PGKARRNRAPGV*GRDRGHQPLGR
Trigger: CCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCCGATTTCGCCGCGCCTTCCCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 72 bp CGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTaGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACG +
Preference number: 4 (lower is better)
Translates to: RRGAAHDAEEVP*SSGGSAHVQGT
Trigger: CGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp CTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTCGCGCTCCACGTGCTTaGAGGCGGACGCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: LPTPAEEPPTMPRKCPCPRAPRA*RRTPLP
Trigger: CGGAAGAGGCGTCCGCCTTCAAGCACGTGGAGCGCG...AGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp GTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTGATGCCCTCCCGCGGGCGCGGAGTTTGGTaGGAGAGTTGCGCTGCGAAG +
Preference number: 4 (lower is better)
Translates to: VGEVAEGAEEASRLMPSRGRGVW*ESCAAK
Trigger: CTTCGCAGCGCAACTCTCTCACCAAACTCCGCGCCC...GCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp GTGCCCTTGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCTGGGCTGCCCCCACTTaGCTGGGGTCGGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: VPLSSGGSAHVQGTVQLLWAAPT*LGSARW
Trigger: CCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCA...GAGCAGCTGGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp TGTGCATGGCGATCTCTCGGTCGATGCTGGCCAGCGACCCCAGCTCGGCGGGGCGGCGGGCCCAGGGGGTaGGGTCGCAAAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: CAWRSLGRCWPATPARRGGGPRG*GRKVPA
Trigger: GGCAGGAACTTTGCGACCCCACCCCCTGGGCCCGCC...GCCCCGCCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCAGCAGGCACTTGGGATaGTGGTGGTGGTGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: PLGRRLGEPRVRGAGRRRSRHLG*WWWCAW
Trigger: CCACGCGCACCACCACCACCATCCCAAGTGCCTGCT...GCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCCAGCGAGCAGGCACTTaGGATGGTGGTGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPQRAGT*DGGGGA
Trigger: CGCACCACCACCACCATCCCAAGTGCCTGCTCGCTG...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTGGCCGTCGCCCGCTTTaGCGAGCAGACTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LPTPAEEPPTMPRKCPCPGRRPL*RADSGQ
Trigger: CTGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGGCC...AGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCCGCGCACCGCAGGCCTaGACTGGTGGCGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: HPRSPEARGAEVLVALELRAPQA*TGGGPR
Trigger: CCTGGGCCCGCCACCAGTTCAGGCCTGCGGTGCGCG...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGCGACCCTTCTGGGCGGTTCAGGGTaGGCTCATCCAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: RRRDGRWQRPRVQASATLLGGSG*AHPRSP
Trigger: TGGACTTCTTGGATGAGCTCACCCTGAACCGCCCAG...AAGGGTCGCGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp GTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTGATGCCCTCCCGCCTCCTTGCTTGCTGCTaGTCTCCTCCCGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: VGEVAEGAEEASRLMPSRLLACC*SPPGRG
Trigger: ACCCCTACCGGGAGGAGAGCAGCAGCAAGCAAGGAG...GCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGAGTCGGCACTCACGCTaGTGGCTGGCGCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QRPGVRRYWWHSSSPGGQSRHSR*WLALWR
Trigger: CCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACT...CTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CCGAGTCCAGGCGTCCGCGACCCTTCCCGGCAGCCATCTCGGACAGCTGCTGATACCGCAGGCCTGAACTaGTGGCGGGCCCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: PSPGVRDPSRQPSRTAADTAGLN*WRAQGV
Trigger: CACCCCCTGGGCCCGCCACCAGTTCAGGCCTGCGGT...ATCAGCAGCTGTCCGAGATGGCTGCCGGGAAGGGTCGCGGACGCCTGGACTCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CCGAGTCCAGGCGTCCGCGACCCTTCCCGGCAGCCATCTCGGACAGCTGCTGATCTGCCCCCACTTGCCTaGGGTCGGCGAGGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: PSPGVRDPSRQPSRTAADLPPLA*GRRGGR
Trigger: TCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAG...ATCAGCAGCTGTCCGAGATGGCTGCCGGGAAGGGTCGCGGACGCCTGGACTCGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCAGACTCTGGCCAGGGTaGCGGGACTTGACATGTCGC +
Preference number: 4 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPRLWPG*RDLTCR
Trigger: GCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCT...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp GTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCCCTCCGCCCGCGGAGTaGCGCGGGCGGGCATGCACT +
Preference number: 4 (lower is better)
Translates to: VRRYWWHSSSPGGQIYATPPPAE*RGRACT
Trigger: AGTGCATGCCCGCCCGCGTCACTCCGCGGGCGGAGG...GGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GTGCCCTTGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCCGGGCGGGCATGCACTaGGCCTTTTCAATCGGGGCG +
Preference number: 4 (lower is better)
Translates to: VPLSSGGSAHVQGTVQLLRAGMH*AFSIGA
Trigger: CGCCCCGATTGAAAAGGCGCAGTGCATGCCCGCCCG...GAGCAGCTGGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp GAGCAGACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGGCCGCGTGTTCGTGGTaGAGGAAGGCGCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: EQTLARVAGLDMSLQVPAAACSW*RKAPPP
Trigger: TGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGC...CGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCGTATTGCCCTCGGCGTaGAGCCGGATGTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPVLPSA*SRMCLL
Trigger: CAACAAGCACATCCGGCTGCACGCCGAGGGCAATAC...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp GTGCCCTTGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCGCGCTGCGAAGCAGCTaGAGAGTCCCACCCGAGAGG +
Preference number: 4 (lower is better)
Translates to: VPLSSGGSAHVQGTVQLLALRSS*RVPPER
Trigger: CCTCTCGGGTGGGACTCTGCAGCTGCTTCGCAGCGC...GAGCAGCTGGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GAGCAGACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGCGAGCCGCGTGTTCGTaGTGCAGGAAGGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: EQTLARVAGLDMSLQVPARAACS*CRKAPP
Trigger: AGGCGGCGCCTTCCTGCACCACGAACACGCGGCTCG...CGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACCGCCGCGACGGCCGGTaGCAACGTCCCCGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYRRDGR*QRPRVQ
Trigger: CTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCG...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTGGTACTTGCCCAGCTTaGAGGTACCAGGCACCGGTC +
Preference number: 4 (lower is better)
Translates to: LPTPAEEPPTMPRKCPCPGTCPA*RYQAPV
Trigger: GACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACC...AGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTGGGCTGCCCCCACTTaGCTGGGGTCGGCGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HPRSPEARGAEVLVALELWAAPT*LGSARW
Trigger: CCACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCA...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp ACCCGGATAGGCTTTGAGACCGCCCGGGTCGAGGGGCGGCAGCGCGCAGCGCTCGAGTCGGAGTCGCTGTaGTGGGGATGTCGAACCACT +
Preference number: 4 (lower is better)
Translates to: TRIGFETARVEGRQRAALESESL*WGCRTT
Trigger: AGTGGTTCGACATCCCCACCACAGCGACTCCGACTC...GAGCGCTGCGCGCTGCCGCCCCTCGACCCGGGCGGTCTCAAAGCCTATCCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GTAGAGCAGCTCCCCGTTGTAGACTGTAAAGGCCGGCATGACGGCGGGCAGGTGGCAGGCCTGAACTGGTaGCGGGCCCAGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VEQLPVVDCKGRHDGGQVAGLNW*RAQGVG
Trigger: CCCCACCCCCTGGGCCCGCCACCAGTTCAGGCCTGC...CACCTGCCCGCCGTCATGCCGGCCTTTACAGTCTACAACGGGGAGCTGCTCTAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp AGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGTCTCTCGGTCGATGCTaGCCAGCGACCCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SPEARGAEVLVALELSRWSLGRC*PATPAR
Trigger: CCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGA...CCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCGCTGCTGATTGTGCATaGCGATCTCTCGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: PLGRRLGEPRVRGAGRRRAADCA*RSLGRC
Trigger: GCATCGACCGAGAGATCGCCATGCACAATCAGCAGC...GCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GTGCCCTTGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCGGGGTGCGGAGGTACTaGTGGCACTCGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPLSSGGSAHVQGTVQLLGVRRY*WHSSSP
Trigger: TGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCC...GAGCAGCTGGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GTGCCCTTGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCCAAGAGCAGACCGCCTaGGCGGTTCAGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: VPLSSGGSAHVQGTVQLLQEQTA*AVQGEL
Trigger: GAGCTCACCCTGAACCGCCCAGGCGGTCTGCTCTTG...GAGCAGCTGGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGCAAGAGCAGACCGCCTaGGCGGTTCAGGGTGAGCTC +
Preference number: 4 (lower is better)
Translates to: QRPGVRRYWWHSSSPGGQQEQTA*AVQGEL
Trigger: GAGCTCACCCTGAACCGCCCAGGCGGTCTGCTCTTG...CTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp TTCGTGGTGCAGGAAGGCGCCGCCTCCACCGCCGCTGAACACGCAGTGGAAACGCGCCTCCACCGCCGCTaGACACGCAGTGGAAACGCA +
Preference number: 4 (lower is better)
Translates to: FVVQEGAASTAAEHAVETRLHRR*TRSGNA
Trigger: TGCGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCG...CGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCGGCGCCTTCCTGCACCACGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCAAAGAGGCCTCGCGCTTaGTGCCCTCCCGCGCACCGC +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPKRPRA*CPPAHR
Trigger: GCGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTT...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCGACAGACTTTGCACTTaGGTGGCTTGTAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: PLGRRLGEPRVRGAGRRRDRLCT*VACSPC
Trigger: ACACGGGCTACAAGCCACTCAAGTGCAAAGTCTGTC...GCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp GTGCCTCCCGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGGATTTACGCCACCTCTaGACTGTTGCTCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: VPPAAATAGGNVPESRRPDLRHL*TVALSF
Trigger: GAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATC...CGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCGGGAGGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCTCTGGCGGCTCCGTaGATTGTTGCCGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYALAAP*IVAAAT
Trigger: GGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGC...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTCGGGTGCGCGAGTACAGCTTaGCACAGTAGAGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: RPPPRSRPRCRGSALVLGCASTA*HSRGTG
Trigger: ACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCA...CCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CCCAGCAGCCTGCCCAAAGCGAGGCCGGCTCCTTGCTTGCTGCTGCTCTCCTCCTGGTGGCTGGCGCTCTaGCGGCTCCGTGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: PSSLPKARPAPCLLLLSSWWLAL*RLRALL
Trigger: CAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCA...GGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCTTTGGGCAGGCTGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GAGCAGACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGAGCTCCTCCCCTGGCTaGACGTCTCGCAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: EQTLARVAGLDMSLQVPASSSPG*TSRNAR
Trigger: CCGAGCATTGCGAGACGTCCAGCCAGGGGAGGAGCT...CGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCAGAGGCCATCAGCCGCTaGGACGGCGCCTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPEAISR*DGALAS
Trigger: GCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTC...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCGGCGGGCCCAGGGGGTaGGGTCGCAAAGTTCCTGCC +
Preference number: 4 (lower is better)
Translates to: VRRYWWHSSSPGGQIYATGGPRG*GRKVPA
Trigger: GGCAGGAACTTTGCGACCCCACCCCCTGGGCCCGCC...GGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GGTTTTGGGGAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTTGGCGAGCCACCTCGGGGTCGCTCTaGTCGTCTGTGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: GFGERPRPSAAGTAPWRATSGSL*SSVKQT
Trigger: CGTCTGCTTCACAGACGACCAGAGCGACCCCGAGGT...GGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000369214.2
3UTR CAA 72 bp GCTTTGGCGAGCAGACTCTGGCCAGGGTGGCGGGACTaGACATGTCGCTCCAGGTCCCGGCGGCGCACAAGT +
Preference number: 4 (lower is better)
Translates to: ALASRLWPGWRD*TCRSRSRRRTS
Trigger: ACTTGTGCGCCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACCCGCTGCAGGCCCGCTaGAGTAGGAGATGGACTCCG +
Preference number: 4 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYPLQAR*SRRWTP
Trigger: CGGAGTCCATCTCCTACTTCAGCGGGCCTGCAGCGG...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GTAGAGCAGCTCCCCGTTGTAGACTGTAAAGGCCGGCATGACGGCGGGCAGGTGGGCTCCGTGCATTGTTaGCGCCGCCACCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: VEQLPVVDCKGRHDGGQVGSVHC*RRHQAG
Trigger: GCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCC...CACCTGCCCGCCGTCATGCCGGCCTTTACAGTCTACAACGGGGAGCTGCTCTAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GAGCAGACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGTGTCAGCTCCTCCCCTaGCTGGACGTCTCGCAATGC +
Preference number: 4 (lower is better)
Translates to: EQTLARVAGLDMSLQVPACQLLP*LDVSQC
Trigger: GCATTGCGAGACGTCCAGCCAGGGGAGGAGCTGACA...CGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCGGGCGCCGGGGGTTTTaGGGAGAGACCGAGGCCATC +
Preference number: 4 (lower is better)
Translates to: VRRYWWHSSSPGGQIYATGRRGF*GETEAI
Trigger: GATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCC...GGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CATACTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGCTGGGGTCGGCGAGGTaGCCGAGGGCGCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: HTCASTACHSRGTGGRSWLGSAR*PRARKR
Trigger: CCTCTTCCGCGCCCTCGGCCACCTCGCCGACCCCAG...CCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAGTATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCACAGGTGGCCGGTCTTaGGCTTACCTGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HPRSPEARGAEVLVALELTGGRS*AYLRRC
Trigger: GCAGCGGCGCAGGTAAGCCCAAGACCGGCCACCTGT...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp TGTGCATGGCGATCTCTCGGTCGATGCTGGCCAGCGACCCCAGCTCGGCGGGGCCTCGAGCTCTCCAGGTaGCCAGATTTACGCCACCTC +
Preference number: 4 (lower is better)
Translates to: CAWRSLGRCWPATPARRGLELSR*PDLRHL
Trigger: GAGGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAG...GCCCCGCCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCGCCATGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp AGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGGTGCGGAGGTACTGGTaGCACTCGAGCTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SPEARGAEVLVALELSRWVRRYW*HSSSPG
Trigger: ACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCAC...CCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp TTCGTGGTGCAGGAAGGCGCCGCCTCCACCGCCGCTGAACACGCAGTGGAAACGGCCGGATGTGCTTGTTaGGATTGCTGGGGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: FVVQEGAASTAAEHAVETAGCAC*DCWGRR
Trigger: TCGGCGACCCCAGCAATCTCAACAAGCACATCCGGC...CGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCGGCGCCTTCCTGCACCACGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACAGGGTGGCGGGACTTaGCATGTCGCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPQGGGT*HVAPGP
Trigger: GGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTG...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCAGGGCACGGTCCAGCTaGTCCTTGCCCTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: HPRSPEARGAEVLVALELRARSS*SLPFLG
Trigger: GCCCAAGAAGGGCAAGGAGCAGCTGGACCGTGCCCT...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACACGATGCCGAGGAAGTaGCCTTGTCCTCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYTMPRK*PCPRAA
Trigger: AGCCGCCCGAGGACAAGGGCACTTCCTCGGCATCGT...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp ACCCGGATAGGCTTTGAGACCGCCCGGGTCGAGGGGCGGCAGCGCGCAGCGCTCCCACCTCTGAACTGTTaGTCTGAGTTTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: TRIGFETARVEGRQRAALPPLNC*SEFQHQ
Trigger: CTGGTGCTGAAACTCAGAGCAACAGTTCAGAGGTGG...GAGCGCTGCGCGCTGCCGCCCCTCGACCCGGGCGGTCTCAAAGCCTATCCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CCCAGCAGCCTGCCCAAAGCGAGGCCGGCTCCTTGCTTGCTGCTGCTCTCCTCCTCGGAGTCGCTGTGGTaGGGATGTCGAACCACTGAG +
Preference number: 4 (lower is better)
Translates to: PSSLPKARPAPCLLLLSSSESLW*GCRTTE
Trigger: CTCAGTGGTTCGACATCCCCACCACAGCGACTCCGA...GGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCTTTGGGCAGGCTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GAGCAGACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGGGTAATAAGCGGTGGTaGCCGGTGAGCCGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: EQTLARVAGLDMSLQVPAGNKRW*PVSRRA
Trigger: TGCTCTACGGCTCACCGGCCACCACCGCTTATTACC...CGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTTGGCGAGCAGACTCTaGCCAGGGTGGCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: HPRSPEARGAEVLVALELLASRL*PGWRDL
Trigger: CAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAA...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGCGACCCTTTTTCAGCACCAGATGTaGGACCTCTCACTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: RRRDGRWQRPRVQASATLFQHQM*DLSLFQ
Trigger: TTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAA...AAGGGTCGCGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGGTACTTGCCCAGCTTaGAGGTACCAGGCACCGGTC +
Preference number: 4 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYGTCPA*RYQAPV
Trigger: GACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACC...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACCGCGCACCGCAGGCCTaGACTGGTGGCGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQVARFTPPLNCCSEFQHRAPQA*TGGGPR
Trigger: CCTGGGCCCGCCACCAGTTCAGGCCTGCGGTGCGCG...GTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATCTCGGACAGCTGCTaGTTGTGCATGGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: QRPGVRRYWWHSSSPGGQISDSC*LCMAIS
Trigger: AGAGATCGCCATGCACAATCAGCAGCTGTCCGAGAT...CTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACCGCTCTGGTCGTCTGTaGAGCAGACGTCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYRSGRL*SRRPRH
Trigger: GTGACGTGGACGTCTGCTTCACAGACGACCAGAGCG...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCAAGGCACTTGGGATGGTaGTGGTGGTGCGCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPRHLGW*WWCAWW
Trigger: CCACCACGCGCACCACCACCACCATCCCAAGTGCCT...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCAAGCAGGCACTTGGGATaGTGGTGGTGGTGCGCGTGG +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPSRHLG*WWWCAW
Trigger: CCACGCGCACCACCACCACCATCCCAAGTGCCTGCT...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCCGCATAACGCGCTCCTaGCAGCGCGGCGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPRITRS*QRGGCG
Trigger: CCCGCAGCCGCCGCGCTGCCAGGAGCGCGTTATGCG...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GTAGAGCAGCTCCCCGTTGTAGACTGTAAAGGCCGGCATGACGGCGGGCAGGTGTTGGCGAGCAGACTCTaGCCAGGGTGGCGGGACTTG +
Preference number: 4 (lower is better)
Translates to: VEQLPVVDCKGRHDGGQVLASRL*PGWRDL
Trigger: CAAGTCCCGCCACCCTGGCCAGAGTCTGCTCGCCAA...CACCTGCCCGCCGTCATGCCGGCCTTTACAGTCTACAACGGGGAGCTGCTCTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp GTGCCCTTGTCCTCGGGCGGCTCCGCTCATGTCCAGGGCACGGTCCAGCTGCTCGGGATGTCGAACCACTaGGCCAAGGAGTTAGAATAC +
Preference number: 4 (lower is better)
Translates to: VPLSSGGSAHVQGTVQLLGMSNH*AKELEY
Trigger: GTATTCTAACTCCTTGGCTCAGTGGTTCGACATCCC...GAGCAGCTGGACCGTGCCCTGGACATGAGCGGAGCCGCCCGAGGACAAGGGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCATCCCCTTTCTCGTCGTaGGTCGGAGTCGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPSPFSS*VGVAVV
Trigger: CACCACAGCGACTCCGACTCACGACGAGAAAGGGGA...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp AGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGATCTCGGACAGCTGCTaGTTGTGCATGGCGATCTCT +
Preference number: 4 (lower is better)
Translates to: SPEARGAEVLVALELSRWISDSC*LCMAIS
Trigger: AGAGATCGCCATGCACAATCAGCAGCTGTCCGAGAT...CCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCCTGGGCGGTTCAGGGTaGGCTCATCCAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: HPRSPEARGAEVLVALELLGGSG*AHPRSP
Trigger: TGGACTTCTTGGATGAGCTCACCCTGAACCGCCCAG...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCCGGCACTCACGCTGGTaGCTGGCGCTCTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPRHSRW*LALWRL
Trigger: GAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCG...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGGTTCCTGGGAGTTTCTaGCTGCCCGGATTAACCCTA +
Preference number: 4 (lower is better)
Translates to: SPEARGAEVLVALELSRWVPGSF*LPGLTL
Trigger: TAGGGTTAATCCGGGCAGCCAGAAACTCCCAGGAAC...CCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACGCAGGCCTGAACTGGTaGCGGGCCCAGGGGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LQVARFTPPLNCCSEFQHAGLNW*RAQGVG
Trigger: CCCCACCCCCTGGGCCCGCCACCAGTTCAGGCCTGC...GTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCCGCATAACGCGCTCCTaGCAGCGCGGCGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: LSFSTRCGTSHCFKSGALRITRS*QRGGCG
Trigger: CCCGCAGCCGCCGCGCTGCCAGGAGCGCGTTATGCG...GAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCCTCGAGCTCTCCAGGTaGCCAGATTTACGCCACCTC +
Preference number: 4 (lower is better)
Translates to: HPRSPEARGAEVLVALELLELSR*PDLRHL
Trigger: GAGGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAG...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGGCTTCGCTCTGGTCGTCTGTaGAGCAGACGTCCACGTCAC +
Preference number: 4 (lower is better)
Translates to: LARVQLATVEAQVAGLGLRSGRL*SRRPRH
Trigger: GTGACGTGGACGTCTGCTTCACAGACGACCAGAGCG...AAGCCCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGCCGCGTGTTCGTGGTaGAGGAAGGCGCCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPAACSW*RKAPPP
Trigger: TGGAGGCGGCGCCTTCCTGCACCACGAACACGCGGC...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCCGGCACTCACGCTGGTaGCTGGCGCTCTGGCGGCTC +
Preference number: 4 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTRHSRW*LALWRL
Trigger: GAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCG...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCGAGGCCATCAGCCGCTaGGACGGCGCCTTGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LSFSTRCGTSHCFKSGALEAISR*DGALAS
Trigger: GCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTC...GAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGGCCGTCGCCCGCTTTaGCGAGCAGACTCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPGRRPL*RADSGQ
Trigger: CTGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGGCC...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGGCGGGCTTGAAAGCTaGGCGCACGCCGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPGGLES*AHAGVE
Trigger: TTCTACCCCGGCGTGCGCTCAGCTTTCAAGCCCGCC...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACCTAGGCCGGCGGGCTTaGAAGCTGAGCGCACGCCGG +
Preference number: 4 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNLGRRA*KLSARR
Trigger: CCGGCGTGCGCTCAGCTTTCAAGCCCGCCGGCCTAG...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCCACCCGGATAGGCTTTaGGACCGCCCGGGTCGAGGG +
Preference number: 4 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTHPDRL*DRPGRG
Trigger: CCCTCGACCCGGGCGGTCTCAAAGCCTATCCGGGTG...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp AGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGTCTGAACTGTTGCTCTaGGTTTCAGCACCAGATGTG +
Preference number: 4 (lower is better)
Translates to: SPEARGAEVLVALELSRWSELLL*VSAPDV
Trigger: CACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGA...CCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCGGGGCGCGCTCCACGTaGTTGAAGGCGGACGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSFSTRCGTSHCFKSGALGARST*LKADAS
Trigger: AGAGGCGTCCGCCTTCAAGCACGTGGAGCGCGCCCC...GAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCCGGCGGGCAGGTGGCTaGACTCACCACCCGGATAGG +
Preference number: 4 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTRRAGG*THHPDR
Trigger: CCTATCCGGGTGGTGAGTGCAGCCACCTGCCCGCCG...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCATGCGCGAGTACAGCTTaGCACAGTAGAGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPCASTA*HSRGTG
Trigger: ACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCA...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGGCTTGCGTGCAGCCGGATGTaGTTGTTGAGATTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LARVQLATVEAQVAGLGLACSRM*LLRLLG
Trigger: CCCCAGCAATCTCAACAAGCACATCCGGCTGCACGC...AAGCCCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCCCGCTGAACACGCAGTaGAAACGCAGGTGTGCCTTA +
Preference number: 4 (lower is better)
Translates to: VRRYWWHSSSPGGQIYATPLNTQ*KRRCAL
Trigger: TAAGGCACACCTGCGTTTCCACTGCGTGTTCAGCGG...GGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACGCTGGGACGGCGCCTTaGCGAGCCGCGTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNAGTAP*RAACSW
Trigger: CCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGC...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGGCTTTCCGCATGTGGATCTTaGGCCCATACTTGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: LARVQLATVEAQVAGLGLSACGS*AHTCAS
Trigger: ACTCGCGCAAGTATGGGCTCAAGATCCACATGCGGA...AAGCCCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCAGACAGACTTTGCACTTaGGTGGCTTGTAGCCCGTGT +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPDRLCT*VACSPC
Trigger: ACACGGGCTACAAGCCACTCAAGTGCAAAGTCTGTC...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCCGGGCGGGCATGCACTaGGCCTTTTCAATCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LSFSTRCGTSHCFKSGALRAGMH*AFSIGA
Trigger: CGCCCCGATTGAAAAGGCGCAGTGCATGCCCGCCCG...GAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACGGTAGAAAGCCAGGCTaGCGACCCCCGCCGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNGRKPG*RPPPRS
Trigger: GCTCCTCGGCGGGGGTCGGCAGCCTGGCTTTCTACC...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCCGGCTCCTTGCTTGCTaGTGCTCTCCTCCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPRLLAC*CSPPGR
Trigger: CCTACCGGGAGGAGAGCAGCAGCAAGCAAGGAGCCG...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAGGCTGTTGGGGTATCTAAACGTCCTCCAGCAGTACCAGCAGATGTAGCGCTCACAGGTGGCCGGTCTTaGGCTTACCTGCGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: KAVGVSKRPPAVPADVALTGGRS*AYLRRC
Trigger: GCAGCGGCGCAGGTAAGCCCAAGACCGGCCACCTGT...GAGCGCTACATCTGCTGGTACTGCTGGAGGACGTTTAGATACCCCAACAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCAGTGTGCGTCCGCATGTaGATCTTGAGCCCATACTTG +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPVCVRM*ILSPYL
Trigger: CAAGTATGGGCTCAAGATCCACATGCGGACGCACAC...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGGGGTGCGGAGGTACTaGTGGCACTCGAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPGVRRY*WHSSSP
Trigger: TGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCC...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACGGCGGGCTTGAAAGCTaGGCGCACGCCGGGGTAGAA +
Preference number: 4 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNGGLES*AHAGVE
Trigger: TTCTACCCCGGCGTGCGCTCAGCTTTCAAGCCCGCC...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGAGCGGTGGTGGCCGGTaGGCCGTAGAGCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRSGGGR*AVEQLP
Trigger: GGGGAGCTGCTCTACGGCTCACCGGCCACCACCGCT...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACCAGGGTGGCGGGACTTaGCATGTCGCTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNQGGGT*HVAPGP
Trigger: GGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTG...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGATTTACGCCACCTCTaGACTGTTGCTCTGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYDLRHL*TVALSF
Trigger: GAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATC...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CCGAGTCCAGGCGTCCGCGACCCTTCCCGGCAGCCATCTCGGACAGCTGCTGATACATCTACCCAATTGTaGCTAGTGTTTTGCCTATGC +
Preference number: 4 (lower is better)
Translates to: PSPGVRDPSRQPSRTAADTSTQL*LVFCLC
Trigger: GCATAGGCAAAACACTAGTCACAATTGGGTAGATGT...ATCAGCAGCTGTCCGAGATGGCTGCCGGGAAGGGTCGCGGACGCCTGGACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp CTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACGGGTCGCAAAGTTCCTaGCTGGGAAGGCGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: LQVARFTPPLNCCSEFQHGSQSS*LGRRGE
Trigger: TTCGCCGCGCCTTCCCAGGCAGGAACTTTGCGACCC...GTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACTTGCCCTTCTTGGGCTaGCCCCACTTGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: LQVARFTPPLNCCSEFQHLPFLG*PHLPGV
Trigger: GACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAA...GTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCCGGCTCCTTGCTTGCTaGTGCTCTCCTCCCGGTAGG +
Preference number: 4 (lower is better)
Translates to: LSFSTRCGTSHCFKSGALRLLAC*CSPPGR
Trigger: CCTACCGGGAGGAGAGCAGCAGCAAGCAAGGAGCCG...GAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACCGATCTCTCGGTCGATaGTGGCCAGCGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LQVARFTPPLNCCSEFQHRSLGR*WPATPA
Trigger: AGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCG...GTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCCGATCTCTCGGTCGATaGTGGCCAGCGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSFSTRCGTSHCFKSGALRSLGR*WPATPA
Trigger: AGCTGGGGTCGCTGGCCAGCATCGACCGAGAGATCG...GAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACCAGGAGTTCCTCTACTaGGAGAATAAACCCTCGACT +
Preference number: 4 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYQEFLY*ENKPST
Trigger: AGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCACCTCTGAACTGTTaGTCTGAGTTTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: GCGGTGGTRALQVARFTPPPLNC*SEFQHQ
Trigger: CTGGTGCTGAAACTCAGAGCAACAGTTCAGAGGTGG...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACGCTCCCCTCTCACCATaGGCACAGTGGGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LQVARFTPPLNCCSEFQHAPLSP*AQWAEV
Trigger: GACCTCTGCCCACTGTGCGCATGGTGAGAGGGGAGC...GTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCTGGTGGCTGGCGCTCTaGCGGCTCCGTGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTWWLAL*RLRALL
Trigger: CAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCA...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTAGCGGTGGTGGCCGGTaGGCCGTAGAGCAGCTCCCC +
Preference number: 4 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFSGGGR*AVEQLP
Trigger: GGGGAGCTGCTCTACGGCTCACCGGCCACCACCGCT...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGGTTTTGCCTATGCAATaGAATGCTAACGTGAAATAC +
Preference number: 4 (lower is better)
Translates to: QRPGVRRYWWHSSSPGGQVLPMQ*NANVKY
Trigger: GTATTTCACGTTAGCATTTCATTGCATAGGCAAAAC...CTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACGGGTCGCAAAGTTCCTaGCTGGGAAGGCGCGGCGAA +
Preference number: 4 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNGSQSS*LGRRGE
Trigger: TTCGCCGCGCCTTCCCAGGCAGGAACTTTGCGACCC...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCGGCGCACAAGTACCTTaGCGCAGAACTCGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTGAQVP*RRTRSG
Trigger: ACCGCTGCGAGTTCTGCGGCAAGGTACTTGTGCGCC...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GTAGAGCAGCTCCCCGTTGTAGACTGTAAAGGCCGGCATGACGGCGGGCAGGTGCAGGAGTTCCTCTACTaGGAGAATAAACCCTCGACT +
Preference number: 4 (lower is better)
Translates to: VEQLPVVDCKGRHDGGQVQEFLY*ENKPST
Trigger: AGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG...CACCTGCCCGCCGTCATGCCGGCCTTTACAGTCTACAACGGGGAGCTGCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CCA 90 bp CTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACGGTGCTCCAGGTCCTTaGAAGGGCGCGAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: LQVARFTPPLNCCSEFQHGAPGP*KGASDR
Trigger: TCTGTCACTCGCGCCCTTCCAAGGACCTGGAGCACC...GTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGACTCACGCTGGTGGCTaGCGCTCTGGCGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRTHAGG*RSGGSV
Trigger: CACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGT...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGAGTCGGCACTCACGCTaGTGGCTGGCGCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRSRHSR*WLALWR
Trigger: CCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACT...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCACCTCGGGGTCGCTCTaGTCGTCTGTGAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTTSGSL*SSVKQT
Trigger: CGTCTGCTTCACAGACGACCAGAGCGACCCCGAGGT...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAGGCTGTTGGGGTATCTAAACGTCCTCCAGCAGTACCAGCAGATGTAGCGCTCGTGCGGAGGTACTGGTaGCACTCGAGCTCTCCAGGT +
Preference number: 4 (lower is better)
Translates to: KAVGVSKRPPAVPADVALVRRYW*HSSSPG
Trigger: ACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCAC...GAGCGCTACATCTGCTGGTACTGCTGGAGGACGTTTAGATACCCCAACAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTGCTCTGGCGGCTCCGTaGATTGTTGCCGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFALAAP*IVAAAT
Trigger: GGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGC...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp AGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGGTGGCAGTTAAAATCTaGGCCCTCGAAGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: RSSSTARINPRLLSVLTPVAVKI*ALEGAV
Trigger: CACAGCGCCTTCGAGGGCGCAGATTTTAACTGCCAC...CGGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CTCCAGGTGGCCAGATTTACGCCACCTCTGAACTGTTGCTCTGAGTTTCAGCACTCGGAGTCGCTGTGGTaGGGATGTCGAACCACTGAG +
Preference number: 4 (lower is better)
Translates to: LQVARFTPPLNCCSEFQHSESLW*GCRTTE
Trigger: CTCAGTGGTTCGACATCCCCACCACAGCGACTCCGA...GTGCTGAAACTCAGAGCAACAGTTCAGAGGTGGCGTAAATCTGGCCACCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCGGTAATAAGCGGTGGTaGCCGGTGAGCCGTAGAGCA +
Preference number: 4 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTGNKRW*PVSRRA
Trigger: TGCTCTACGGCTCACCGGCCACCACCGCTTATTACC...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTCGCCTCCACCGCCGCTaGACACGCAGTGGAAACGCA +
Preference number: 4 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFRLHRR*TRSGNA
Trigger: TGCGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCG...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTAGGCAGGCGCTCGGGTaGTCCAGGTCCTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFRQALG*SRSLEG
Trigger: CCCTTCCAAGGACCTGGAGCACCCGAGCGCCTGCCT...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCCTGGACGTCTCGCAATaGTCGGTAGAAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPLDVSQ*SVEDLS
Trigger: GGACAGATCTTCTACCGAGCATTGCGAGACGTCCAG...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGTGGAAACGCAGGTGTaGCTTAAGGCTGTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: QEFLYCENKPSTPLCPHPVETQV*LKAVGV
Trigger: TACCCCAACAGCCTTAAGGCACACCTGCGTTTCCAC...GGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp AGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGGCCGGCTCCTTGCTTaGTGCTGCTCTCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: RCGTSHCFKSGALSKTKTGRLLA*CCSPPG
Trigger: ACCGGGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCC...CGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGAGCTCCTCCCCTGGCTaGACGTCTCGCAATGCTCGG +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRSSSPG*TSRNAR
Trigger: CCGAGCATTGCGAGACGTCCAGCCAGGGGAGGAGCT...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGGCTGGGACGGCGCCTTaGCGAGCCGCGTGTTCGTGG +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKEAGTAP*RAACSW
Trigger: CCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGC...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGATGACGGCGGGCAGGTaGCTGCACTCACCACCCGGA +
Preference number: 4 (lower is better)
Translates to: RCGTSHCFKSGALSKTKTMTAGR*LHSPPG
Trigger: TCCGGGTGGTGAGTGCAGCCACCTGCCCGCCGTCAT...CGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp ACTGTTGCTCTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTTCTCTCGGTCGATGCTaGCCAGCGACCCCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TVALSFSTRCGTSHCFKSSLGRC*PATPAR
Trigger: CCGAGCTGGGGTCGCTGGCCAGCATCGACCGAGAGA...AGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp ACTGTTGCTCTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTCACTGTCGTCGCTCTTaGGATCCCCAGGCTCCGGGG +
Preference number: 4 (lower is better)
Translates to: TVALSFSTRCGTSHCFKSHCRRS*DPQAPG
Trigger: CCCCGGAGCCTGGGGATCCCAAGAGCGACGACAGTG...AGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
3UTR CAA 72 bp AACACGCAGTGGAAACGCAGGTGTGCCTTAAGGCTGTaGGGGTATCTAAACGTCCTCCAGCAGTACCAGCAG +
Preference number: 4 (lower is better)
Translates to: NTQWKRRCALRL*GYLNVLQQYQQ
Trigger: CTGCTGGTACTGCTGGAGGACGTTTAGATACCCCAACAGCCTTAAGGCACACCTGCGTTTCCACTGCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp AGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGGGGATGTCGAACCACTaGGCCAAGGAGTTAGAATAC +
Preference number: 4 (lower is better)
Translates to: RSSSTARINPRLLSVLTPGMSNH*AKELEY
Trigger: GTATTCTAACTCCTTGGCTCAGTGGTTCGACATCCC...CGGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTAAGAGGCCTCGCGCTTaGTGCCCTCCCGCGCACCGC +
Preference number: 4 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLKRPRA*CPPAHR
Trigger: GCGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTT...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGCGCGCTCCACGTGCTTaGAGGCGGACGCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKERAPRA*RRTPLP
Trigger: CGGAAGAGGCGTCCGCCTTCAAGCACGTGGAGCGCG...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGGCAAGCCGGCCGGGATaGAGCAGTCGGCACTCACGC +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKEASRPG*SSRHSR
Trigger: GCGTGAGTGCCGACTGCTGCATCCCGGCCGGCTTGC...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTTTGCCCTTCTTGGGCTaGCCCCACTTGCCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFLPFLG*PHLPGV
Trigger: GACCCCAGGCAAGTGGGGGCAGCCCAAGAAGGGCAA...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp ACTGTTGCTCTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTAGGGCACGGTCCAGCTaGTCCTTGCCCTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TVALSFSTRCGTSHCFKSRARSS*SLPFLG
Trigger: GCCCAAGAAGGGCAAGGAGCAGCTGGACCGTGCCCT...AGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp ACTGTTGCTCTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTACGATGCCGAGGAAGTaGCCTTGTCCTCGGGCGGCT +
Preference number: 4 (lower is better)
Translates to: TVALSFSTRCGTSHCFKSTMPRK*PCPRAA
Trigger: AGCCGCCCGAGGACAAGGGCACTTCCTCGGCATCGT...AGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGGGCGCACAAGTACCTTaGCGCAGAACTCGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRGAQVP*RRTRSG
Trigger: ACCGCTGCGAGTTCTGCGGCAAGGTACTTGTGCGCC...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCGTTCCTGGGAGTTTCTaGCTGCCCGGATTAACCCTA +
Preference number: 4 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTVPGSF*LPGLTL
Trigger: TAGGGTTAATCCGGGCAGCCAGAAACTCCCAGGAAC...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTGTCAGCTCCTCCCCTaGCTGGACGTCTCGCAATGC +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRCQLLP*LDVSQC
Trigger: GCATTGCGAGACGTCCAGCCAGGGGAGGAGCTGACA...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGCGAGCCGCGTGTTCGTaGTGCAGGAAGGCGCCGCCT +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKERAACS*CRKAPP
Trigger: AGGCGGCGCCTTCCTGCACCACGAACACGCGGCTCG...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTCTGCCCCCACTTGCCTaGGGTCGGCGAGGTGGCCGA +
Preference number: 4 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLLPPLA*GRRGGR
Trigger: TCGGCCACCTCGCCGACCCCAGGCAAGTGGGGGCAG...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTCAGCGAGCAGGCACTTaGGATGGTGGTGGTGGTGCG +
Preference number: 4 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFQRAGT*DGGGGA
Trigger: CGCACCACCACCACCATCCCAAGTGCCTGCTCGCTG...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGGCGGGTAATAAGCGGTaGTGGCCGGTGAGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRAGNKR*WPVSRR
Trigger: TCTACGGCTCACCGGCCACCACCGCTTATTACCCGC...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGAGACTCTGGCCAGGGTaGCGGGACTTGACATGTCGC +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRRLWPG*RDLTCR
Trigger: GCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCT...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACCTGGACGTCTCGCAATaGTCGGTAGAAGATCTGTCC +
Preference number: 4 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNLDVSQ*SVEDLS
Trigger: GGACAGATCTTCTACCGAGCATTGCGAGACGTCCAG...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGGCGAGGCCGGCTCCTTaGTTGCTGCTGCTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKEARPAP*LLLLSS
Trigger: GGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGC...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGAGCGGTAGGGCGTATTaGCCTCGGCGTGCAGCCGGA +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKESGRAY*PRRAAG
Trigger: TCCGGCTGCACGCCGAGGGCAATACGCCCTACCGCT...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGCTGGGGTCGGCGAGGTaGCCGAGGGCGCGGAAGAGG +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMLGSAR*PRARKR
Trigger: CCTCTTCCGCGCCCTCGGCCACCTCGCCGACCCCAG...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGCTAGGCCGGCGGGCTTaGAAGCTGAGCGCACGCCGG +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMLGRRA*KLSARR
Trigger: CCGGCGTGCGCTCAGCTTTCAAGCCCGCCGGCCTAG...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp AAGGCTGTTGGGGTATCTAAACGTCCTCCAGCAGTACCAGCAGATGTAGCGCTCTCTGAACTGTTGCTCTaGGTTTCAGCACCAGATGTG +
Preference number: 4 (lower is better)
Translates to: KAVGVSKRPPAVPADVALSELLL*VSAPDV
Trigger: CACATCTGGTGCTGAAACTCAGAGCAACAGTTCAGA...GAGCGCTACATCTGCTGGTACTGCTGGAGGACGTTTAGATACCCCAACAGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR GCA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTAGGCAGGCGCTCGGGTaGTCCAGGTCCTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLRQALG*SRSLEG
Trigger: CCCTTCCAAGGACCTGGAGCACCCGAGCGCCTGCCT...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp AGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTATTGCCCTCGGCGTaGAGCCGGATGTGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: RCGTSHCFKSGALSKTKTVLPSA*SRMCLL
Trigger: CAACAAGCACATCCGGCTGCACGCCGAGGGCAATAC...CGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTGAGTCGGAGTCGCTGTaGTGGGGATGTCGAACCACT +
Preference number: 4 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFESESL*WGCRTT
Trigger: AGTGGTTCGACATCCCCACCACAGCGACTCCGACTC...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGACCGCAGGCCTGAACTaGTGGCGGGCCCAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMTAGLN*WRAQGV
Trigger: CACCCCCTGGGCCCGCCACCAGTTCAGGCCTGCGGT...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGAGGCACTTGGGATGGTaGTGGTGGTGCGCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKERHLGW*WWCAWW
Trigger: CCACCACGCGCACCACCACCACCATCCCAAGTGCCT...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTGGGCTCCCTGCGGTCTaGCAGGTACTTGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLGLPAV*QVLAQL
Trigger: AAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCC...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTCCCCTTTCTCGTCGTaGGTCGGAGTCGCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKESPFSS*VGVAVV
Trigger: CACCACAGCGACTCCGACTCACGACGAGAAAGGGGA...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGGCCGGATGTGCTTGTTaGGATTGCTGGGGTCGCCGA +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKEAGCAC*DCWGRR
Trigger: TCGGCGACCCCAGCAATCTCAACAAGCACATCCGGC...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGGCAAGCCGGCCGGGATaGAGCAGTCGGCACTCACGC +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMASRPG*SSRHSR
Trigger: GCGTGAGTGCCGACTGCTGCATCCCGGCCGGCTTGC...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGGTGGAAACGCAGGTGTaGCTTAAGGCTGTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRVETQV*LKAVGV
Trigger: TACCCCAACAGCCTTAAGGCACACCTGCGTTTCCAC...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTAGGAGCCGCCCACGATaGCGAGGAAGTGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLRSRPR*RGSALV
Trigger: GACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCT...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTGTGGCAGTTAAAATCTaGGCCCTCGAAGGCGCTGTG +
Preference number: 4 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFVAVKI*ALEGAV
Trigger: CACAGCGCCTTCGAGGGCGCAGATTTTAACTGCCAC...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGCGCAAAGTTCCTGCCTaGGAAGGCGCGGCGAAATCG +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKERKVPA*EGAAKS
Trigger: CGATTTCGCCGCGCCTTCCCAGGCAGGAACTTTGCG...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp ACTGTTGCTCTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGCTGCTGATTGTGCATaGCGATCTCTCGGTCGATGC +
Preference number: 4 (lower is better)
Translates to: TVALSFSTRCGTSHCFKSAADCA*RSLGRC
Trigger: GCATCGACCGAGAGATCGCCATGCACAATCAGCAGC...AGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTCTCCTTGCTTGCTGCTaGTCTCCTCCCGGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLLLACC*SPPGRG
Trigger: ACCCCTACCGGGAGGAGAGCAGCAGCAAGCAAGGAG...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGGGCCGGCTCCTTGCTTaGTGCTGCTCTCCTCCCGGT +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMGRLLA*CCSPPG
Trigger: ACCGGGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCC...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGGCGTGCAGCCGGATGTaGTTGTTGAGATTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKEACSRM*LLRLLG
Trigger: CCCCAGCAATCTCAACAAGCACATCCGGCTGCACGC...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTCCGCATGTGGATCTTaGGCCCATACTTGCGCGAGT +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKESACGS*AHTCAS
Trigger: ACTCGCGCAAGTATGGGCTCAAGATCCACATGCGGA...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTCGCCGAAGTGCAATTTaGGCGGGTAATAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLRRSAI*AGNKRW
Trigger: CCACCGCTTATTACCCGCTCAAATTGCACTTCGGCG...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR GCA 90 bp AAACCAAAATACTATACCCACTGTACAGCAGTCATTATAAAACAACACACACCAAGGAGCCGCCCACGATaGCGAGGAAGTGCCCTTGTC +
Preference number: 4 (lower is better)
Translates to: KPKYYTHCTAVIIKQHTPRSRPR*RGSALV
Trigger: GACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCT...TGGTGTGTGTTGTTTTATAATGACTGCTGTACAGTGGGTATAGTATTTTGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGGGTGCTCCAGGTCCTTaGAAGGGCGCGAGTGACAGA +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMGAPGP*KGASDR
Trigger: TCTGTCACTCGCGCCCTTCCAAGGACCTGGAGCACC...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGCGCAAAGTTCCTGCCTaGGAAGGCGCGGCGAAATCG +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMRKVPA*EGAAKS
Trigger: CGATTTCGCCGCGCCTTCCCAGGCAGGAACTTTGCG...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTCAGCACCAGATGTaGGACCTCTCACTGTTTCAA +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRFQHQM*DLSLFQ
Trigger: TTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAA...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACGTTTTGCCTATGCAATaGAATGCTAACGTGAAATAC +
Preference number: 4 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNVLPMQ*NANVKY
Trigger: GTATTTCACGTTAGCATTTCATTGCATAGGCAAAAC...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAACCAAAATACTATACCCACTGTACAGCAGTCATTATAAAACAACACACACCAGCGGGTAATAAGCGGTaGTGGCCGGTGAGCCGTAGA +
Preference number: 4 (lower is better)
Translates to: KPKYYTHCTAVIIKQHTPAGNKR*WPVSRR
Trigger: TCTACGGCTCACCGGCCACCACCGCTTATTACCCGC...TGGTGTGTGTTGTTTTATAATGACTGCTGTACAGTGGGTATAGTATTTTGGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGCGCCGAAGTGCAATTTaGGCGGGTAATAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMRRSAI*AGNKRW
Trigger: CCACCGCTTATTACCCGCTCAAATTGCACTTCGGCG...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGCCGCTGAACACGCAGTaGAAACGCAGGTGTGCCTTA +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMPLNTQ*KRRCAL
Trigger: TAAGGCACACCTGCGTTTCCACTGCGTGTTCAGCGG...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTCACTGTTTCAAATCTaGCGCCCTCTCAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKRSLFQI*RPLKNK
Trigger: TTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGA...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGGTGTGCGTCCGCATGTaGATCTTGAGCCCATACTTG +
Preference number: 4 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMVCVRM*ILSPYL
Trigger: CAAGTATGGGCTCAAGATCCACATGCGGACGCACAC...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CCA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTCACTGTTTCAAATCTaGCGCCCTCTCAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKESLFQI*RPLKNK
Trigger: TTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGA...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR TCA 90 bp AAACCAAAATACTATACCCACTGTACAGCAGTCATTATAAAACAACACACACCACAGTGGGCAGAGGTCTaGATGGTCAATACCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KPKYYTHCTAVIIKQHTPQWAEV*MVNTFF
Trigger: GAAAAAGGTATTGACCATTCAGACCTCTGCCCACTG...TGGTGTGTGTTGTTTTATAATGACTGCTGTACAGTGGGTATAGTATTTTGGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR TCA 90 bp AAACCAAAATACTATACCCACTGTACAGCAGTCATTATAAAACAACACACACCAACATCTACCCAATTGTaGCTAGTGTTTTGCCTATGC +
Preference number: 4 (lower is better)
Translates to: KPKYYTHCTAVIIKQHTPTSTQL*LVFCLC
Trigger: GCATAGGCAAAACACTAGTCACAATTGGGTAGATGT...TGGTGTGTGTTGTTTTATAATGACTGCTGTACAGTGGGTATAGTATTTTGGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp GTGCCTCCCGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGCGCTGGGACGGCGCCTaGGCGAGCCGCGTGTTCGTG +
Preference number: 5 (lower is better)
Translates to: VPPAAATAGGNVPESRRPRWDGA*ASRVFV
Trigger: CACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCG...CGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCGGGAGGCAC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp GTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTGATGCCCTCCCGCCGGGGCGGGAGCCTTTaGGCACCGCTAGCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: VGEVAEGAEEASRLMPSRRGGSL*APLAQG
Trigger: CCCTTGCGCTAGCGGTGCCAAAAGGCTCCCGCCCCG...GCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp AGCCAGGCTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCCGGGCGCCGGGGGTTTaGGGGAGAGACCGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: SQAADPRRGAAHDAEEVPRAPGV*GRDRGH
Trigger: ATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCCG...GGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAGCCTGGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS CCA 90 bp CGGCCGGGATGCAGCAGTCGGCACTCACGCTGGTGGCTGGCGCTCTaGCGGCTCCGTGCATTGTTGCCGCCGCCACCAGGCAGGCGCTCG +
Preference number: 5 (lower is better)
Translates to: RPGCSSRHSRWWLAL*RLRALLPPPPGRRS
Trigger: CGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCATCCCGGCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS GCA 90 bp CAGCAGTCGGCACTCACGCTGGTGGCTGGCGCTCTGGCGGCTCCGTaGATTGTTGCCGCCGCCACCAGGCAGGCGCTCGGGTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: QQSALTLVAGALAAP*IVAAATRQALGCSR
Trigger: CCTGGAGCACCCGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 90 bp GCGCAAGCCGGCCGGGATGCAGCAGTCGGCACTCACGCTGGTGGCTaGCGCTCTGGCGGCTCCGTGCATTGTTGCCGCCGCCACCAGGCA +
Preference number: 5 (lower is better)
Translates to: AQAGRDAAVGTHAGG*RSGGSVHCCRRHQA
Trigger: TGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCATCCCGGCCGGCTTGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 90 bp CGAGGCGCAAGCCGGCCGGGATGCAGCAGTCGGCACTCACGCTGGTaGCTGGCGCTCTGGCGGCTCCGTGCATTGTTGCCGCCGCCACCA +
Preference number: 5 (lower is better)
Translates to: RGASRPGCSSRHSRW*LALWRLRALLPPPP
Trigger: TGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCATCCCGGCCGGCTTGCGCCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 90 bp GTCCGAGGCGCAAGCCGGCCGGGATGCAGCAGTCGGCACTCACGCTaGTGGCTGGCGCTCTGGCGGCTCCGTGCATTGTTGCCGCCGCCA +
Preference number: 5 (lower is better)
Translates to: VRGASRPGCSSRHSR*WLALWRLRALLPPP
Trigger: TGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCATCCCGGCCGGCTTGCGCCTCGGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp GTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTGATGCCCTCCCGCCGGCGCACAAGTACCTaGCCGCAGAACTCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: VGEVAEGAEEASRLMPSRRRTST*PQNSQR
Trigger: CCGCTGCGAGTTCTGCGGCAAGGTACTTGTGCGCCG...GCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS GCA 90 bp GGCACTCACGCTGGTGGCTGGCGCTCTGGCGGCTCCGTGCATTGTTaGCGCCGCCACCAGGCAGGCGCTCGGGTGCTCCAGGTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: GTHAGGWRSGGSVHC*RRHQAGARVLQVLG
Trigger: TCCAAGGACCTGGAGCACCCGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp GGTTTTGGGGAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTTGGCGAGCCCGGCTCCGTGCATTGTaGCCGCCGCCACCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: GFGERPRPSAAGTAPWRARLRAL*PPPPGR
Trigger: CCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCG...GGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp GGTTTTGGGGAGAGACCGAGGCCATCAGCCGCTGGGACGGCGCCTTGGCGAGCCGCTAGGCCGGCGGGCTaGAAAGCTGAGCGCACGCCG +
Preference number: 5 (lower is better)
Translates to: GFGERPRPSAAGTAPWRAARPAG*KAERTP
Trigger: CGGCGTGCGCTCAGCTTTCAAGCCCGCCGGCCTAGC...GGCTCGCCAAGGCGCCGTCCCAGCGGCTGATGGCCTCGGTCTCTCCCCAAAACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTCGGGTGCTCCTTGCCCTTCTaGGGCTGCCCCCACTTGCCT +
Preference number: 5 (lower is better)
Translates to: RPPPRSRPRCRGSALVLGCSLPF*GCPHLP
Trigger: AGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCA...CCCGAGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CGCCGCCGCGACGGCCGGTGGCAACGTCCCCGAGTCCAGGCGTCCGCGACCCTTGTCCGCATGTGGATCTaGAGCCCATACTTGCGCGAG +
Preference number: 5 (lower is better)
Translates to: RRRDGRWQRPRVQASATLVRMWI*SPYLRE
Trigger: CTCGCGCAAGTATGGGCTCAAGATCCACATGCGGAC...AAGGGTCGCGGACGCCTGGACTCGGGGACGTTGCCACCGGCCGTCGCGGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CCCAGCAGCCTGCCCAAAGCGAGGCCGGCTCCTTGCTTGCTGCTGCTCTCCTCCGGGCCGTCGCCCGCTTaGGCGAGCAGACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: PSSLPKARPAPCLLLLSSGPSPA*ASRLWP
Trigger: TGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGGCCC...GGAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCTTTGGGCAGGCTGCTGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTGCAAGGGCGCGGAGTTaGGTGAGAGAGTTGCGCTGC +
Preference number: 5 (lower is better)
Translates to: LPTPAEEPPTMPRKCPCPARARS*VRELRC
Trigger: GCAGCGCAACTCTCTCACCAAACTCCGCGCCCTTGC...AGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp GTCGGCGAGGTGGCCGAGGGCGCGGAAGAGGCCTCGCGCTTGATGCCCTCCCGCCGGTCTGACAGGTACTaGCCCAGCTTGAAGGTACCA +
Preference number: 5 (lower is better)
Translates to: VGEVAEGAEEASRLMPSRRSDRY*PSLKVP
Trigger: TGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCG...GCGGGAGGGCATCAAGCGCGAGGCCTCTTCCGCGCCCTCGGCCACCTCGCCGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTTGGGCTGCCCCCACTaGCCTGGGGTCGGCGAGGTG +
Preference number: 5 (lower is better)
Translates to: HPRSPEARGAEVLVALELLGCPH*PGVGEV
Trigger: CACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAA...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACTTGGGCTGCCCCCACTaGCCTGGGGTCGGCGAGGTG +
Preference number: 5 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYLGCPH*PGVGEV
Trigger: CACCTCGCCGACCCCAGGCAAGTGGGGGCAGCCCAA...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGGGCCGTCGCCCGCTTaGGCGAGCAGACTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYGPSPA*ASRLWP
Trigger: TGGCCAGAGTCTGCTCGCCAAAGCGGGCGACGGCCC...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCGCGCGCTCCACGTGCTaGAAGGCGGACGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: HPRSPEARGAEVLVALELARSTC*KADASS
Trigger: GGAAGAGGCGTCCGCCTTCAAGCACGTGGAGCGCGC...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CTGCCGACCCCCGCCGAGGAGCCGCCCACGATGCCGAGGAAGTGCCCTTGTCCTATGTGCTTGTTGAGATaGCTGGGGTCGCCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: LPTPAEEPPTMPRKCPCPMCLLR*LGSPKG
Trigger: GCCCTTCGGCGACCCCAGCAATCTCAACAAGCACAT...AGGACAAGGGCACTTCCTCGGCATCGTGGGCGGCTCCTCGGCGGGGGTCGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS TCA 90 bp GGCGGGAGCCTTTTGGCACCGCTAGCGCAAGGGCGCGGAGTTTGGTaGGAGAGTTGCGCTGCGAAGCAGCTGCAGAGTCCCACCCGAGAG +
Preference number: 5 (lower is better)
Translates to: GGSLLAPLAQGRGVW*ESCAAKQLQSPTRE
Trigger: CTCTCGGGTGGGACTCTGCAGCTGCTTCGCAGCGCAACTCTCTCACCAAACTCCGCGCCCTTGCGCTAGCGGTGCCAAAAGGCTCCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACCCAGCGAGCAGGCACTaGGGATGGTGGTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: PGVRRYWWHSSSPGGQIYPASRH*GWWWWC
Trigger: GCACCACCACCACCATCCCAAGTGCCTGCTCGCTGG...GTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CCGAGTCCAGGCGTCCGCGACCCTTCCCGGCAGCCATCTCGGACAGCTGCTGATAGCCGGATGTGCTTGTaGAGATTGCTGGGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: PSPGVRDPSRQPSRTAADSRMCL*RLLGSP
Trigger: CGGCGACCCCAGCAATCTCAACAAGCACATCCGGCT...ATCAGCAGCTGTCCGAGATGGCTGCCGGGAAGGGTCGCGGACGCCTGGACTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCCGGCGCACAAGTACCTaGCCGCAGAACTCGCAGCGG +
Preference number: 5 (lower is better)
Translates to: HPRSPEARGAEVLVALELRRTST*PQNSQR
Trigger: CCGCTGCGAGTTCTGCGGCAAGGTACTTGTGCGCCG...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCACTGTCGTCGCTCTaGGGATCCCCAGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: HPRSPEARGAEVLVALELSLSSL*GSPGSG
Trigger: CCCGGAGCCTGGGGATCCCAAGAGCGACGACAGTGA...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp GTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCTGCTCCTTGCCCTTCTaGGGCTGCCCCCACTTGCCT +
Preference number: 5 (lower is better)
Translates to: VRRYWWHSSSPGGQIYATCSLPF*GCPHLP
Trigger: AGGCAAGTGGGGGCAGCCCAAGAAGGGCAAGGAGCA...GGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp ACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGGCGCACAAACGGTTTTGTCCATaGGGTCCCTCTTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: TLARVAGLDMSLQVPAAHKRFCP*GPSSHH
Trigger: GTGGTGGGAAGAGGGACCCAATGGACAAAACCGTTT...GTGCGCCGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CCGAGTCCAGGCGTCCGCGACCCTTCCCGGCAGCCATCTCGGACAGCTGCTGATAGTTTGGTGAGAGAGTaGCGCTGCGAAGCAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PSPGVRDPSRQPSRTAADSLVRE*RCEAAA
Trigger: TGCAGCTGCTTCGCAGCGCAACTCTCTCACCAAACT...ATCAGCAGCTGTCCGAGATGGCTGCCGGGAAGGGTCGCGGACGCCTGGACTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp AGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGCGGGGCGGGAGCCTTTaGGCACCGCTAGCGCAAGGG +
Preference number: 5 (lower is better)
Translates to: RSSSTARINPRLLSVLTPRGGSL*APLAQG
Trigger: CCCTTGCGCTAGCGGTGCCAAAAGGCTCCCGCCCCG...CGGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CATCCAAGAAGTCCAGAGGCCCGGGGTGCGGAGGTACTGGTGGCACTCGAGCTCAGGTACTTGCCCAGCTaGAAGGTACCAGGCACCGGT +
Preference number: 5 (lower is better)
Translates to: HPRSPEARGAEVLVALELRYLPS*KVPGTG
Trigger: ACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCT...GAGCTCGAGTGCCACCAGTACCTCCGCACCCCGGGCCTCTGGACTTCTTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGCGGGCGCCGGGGGTTTaGGGGAGAGACCGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: RSSSTARINPRLLSVLTPRAPGV*GRDRGH
Trigger: ATGGCCTCGGTCTCTCCCCAAAACCCCCGGCGCCCG...CGGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CATACTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGCCAGGGTGGCGGGACTaGACATGTCGCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: HTCASTACHSRGTGGRSWPGWRD*TCRSRS
Trigger: GGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGG...CCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAGTATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CCGCTGGGACGGCGCCTTGGCGAGCCGCGTGTTCGTGGTGCAGGAAGGCGCCGCTGCAACTTGACCAATTaGTACACCTGCTACCACTAT +
Preference number: 5 (lower is better)
Translates to: PLGRRLGEPRVRGAGRRRCNLTN*YTCYHY
Trigger: ATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTGCA...GCGGCGCCTTCCTGCACCACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS TCA 90 bp TCTCACCATGCGCACCTTTTTCTTAGGCCCGGGCTCCCTGCGGTCTaGCAGGTACTTGCCCAGCTTGAAGGTACCAGGCACCGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: SHHAHLFLRPGLPAV*QVLAQLEGTRHRSE
Trigger: CTCGGACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCTAAGAAAAAGGTGCGCATGGTGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369215.5
CDS-3UTR CAA 90 bp GAGCAGACTCTGGCCAGGGTGGCGGGACTTGACATGTCGCTCCAGGTCCCGGCGTGTGCCTTAAGGCTGTaGGGGTATCTAAACGTCCTC +
Preference number: 5 (lower is better)
Translates to: EQTLARVAGLDMSLQVPACALRL*GYLNVL
Trigger: GAGGACGTTTAGATACCCCAACAGCCTTAAGGCACA...CGCCGGGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGGCCAGAGTCTGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp CTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCGCCGAGGAAGTGCCCTaGTCCTCGGGCGGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: LSFSTRCGTSHCFKSGALAEEVP*SSGGSA
Trigger: AGCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGC...GAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp TTCGTGGTGCAGGAAGGCGCCGCCTCCACCGCCGCTGAACACGCAGTGGAAACGATCTTGAGCCCATACTaGCGCGAGTACAGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: FVVQEGAASTAAEHAVETILSPY*REYSLP
Trigger: TGGCAAGCTGTACTCGCGCAAGTATGGGCTCAAGAT...CGTTTCCACTGCGTGTTCAGCGGCGGTGGAGGCGGCGCCTTCCTGCACCACGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp GTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCACCATGTGCTTGTTGAGATaGCTGGGGTCGCCGAAGGGC +
Preference number: 5 (lower is better)
Translates to: VRRYWWHSSSPGGQIYATMCLLR*LGSPKG
Trigger: GCCCTTCGGCGACCCCAGCAATCTCAACAAGCACAT...GGTGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACCGGCTCCGTGCATTGTaGCCGCCGCCACCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: QHQMWDLSLFQIWRPLKNRLRAL*PPPPGR
Trigger: CCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCG...GTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AAGGCTGTTGGGGTATCTAAACGTCCTCCAGCAGTACCAGCAGATGTAGCGCTCCCAGCGAGCAGGCACTaGGGATGGTGGTGGTGGTGC +
Preference number: 5 (lower is better)
Translates to: KAVGVSKRPPAVPADVALPASRH*GWWWWC
Trigger: GCACCACCACCACCATCCCAAGTGCCTGCTCGCTGG...GAGCGCTACATCTGCTGGTACTGCTGGAGGACGTTTAGATACCCCAACAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCAATCTTGAGCCCATACTaGCGCGAGTACAGCTTGCCA +
Preference number: 5 (lower is better)
Translates to: GCGGTGGTRALQVARFTPILSPY*REYSLP
Trigger: TGGCAAGCTGTACTCGCGCAAGTATGGGCTCAAGAT...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CATACTTGCGCGAGTACAGCTTGCCACAGTAGAGGCACAGGTGGCCGGTCTTGGTGCAGCCGGATGTGCTaGTTGAGATTGCTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: HTCASTACHSRGTGGRSWCSRMC*LRLLGS
Trigger: CGACCCCAGCAATCTCAACAAGCACATCCGGCTGCA...CCAAGACCGGCCACCTGTGCCTCTACTGTGGCAAGCTGTACTCGCGCAAGTATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp GGGTGCGGAGGTACTGGTGGCACTCGAGCTCTCCAGGTGGCCAGATTTACGCCAAAACGGTTTTGTCCATaGGGTCCCTCTTCCCACCAC +
Preference number: 5 (lower is better)
Translates to: GCGGTGGTRALQVARFTPKRFCP*GPSSHH
Trigger: GTGGTGGGAAGAGGGACCCAATGGACAAAACCGTTT...TGGCGTAAATCTGGCCACCTGGAGAGCTCGAGTGCCACCAGTACCTCCGCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS TCA 90 bp CTGAATGGTCAATACCTTTTTCTTAGGCCCGGGCTCCCTGCGGTCTaGCAGGTACTTGCCCAGCTTGAAGGTACCAGGCACCGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: LNGQYLFLRPGLPAV*QVLAQLEGTRHRSE
Trigger: CTCGGACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCTAAGAAAAAGGTATTGACCATTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS-3UTR CAA 90 bp GATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGGAAGAGGCCTCGCGCTaGATGCCCTCCCGCGCACCG +
Preference number: 5 (lower is better)
Translates to: DVGPLTVSNLAPSQKQKREEASR*MPSRAP
Trigger: CGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTTC...CCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGCTAGGCCGGCGGGCTaGAAAGCTGAGCGCACGCCG +
Preference number: 5 (lower is better)
Translates to: RCGTSHCFKSGALSKTKTARPAG*KAERTP
Trigger: CGGCGTGCGCTCAGCTTTCAAGCCCGCCGGCCTAGC...CGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AGGAGTTCCTCTACTGCGAGAATAAACCCTCGACTCCTCTCTGTCCTCACCCCGTGCAGCCGGATGTGCTaGTTGAGATTGCTGGGGTCG +
Preference number: 5 (lower is better)
Translates to: RSSSTARINPRLLSVLTPCSRMC*LRLLGS
Trigger: CGACCCCAGCAATCTCAACAAGCACATCCGGCTGCA...CGGGGTGAGGACAGAGAGGAGTCGAGGGTTTATTCTCGCAGTAGAGGAACTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGCGCTGGGACGGCGCCTaGGCGAGCCGCGTGTTCGTG +
Preference number: 5 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKERWDGA*ASRVFV
Trigger: CACGAACACGCGGCTCGCCAAGGCGCCGTCCCAGCG...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp ACTGTTGCTCTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGCGCGCTCCACGTGCTaGAAGGCGGACGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TVALSFSTRCGTSHCFKSARSTC*KADASS
Trigger: GGAAGAGGCGTCCGCCTTCAAGCACGTGGAGCGCGC...AGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AATCTGCGCCCTCGAAGGCGCTGTGACGTTCGCATTGATGTGATTCTGAACACCGTCCGCATGTGGATCTaGAGCCCATACTTGCGCGAG +
Preference number: 5 (lower is better)
Translates to: NLRPRRRCDVRIDVILNTVRMWI*SPYLRE
Trigger: CTCGCGCAAGTATGGGCTCAAGATCCACATGCGGAC...GGTGTTCAGAATCACATCAATGCGAACGTCACAGCGCCTTCGAGGGCGCAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 90 bp ATCTGTCCTCCGGGTAAGTCTGCAATAGCTTCCAGAGTCTGTTCCTaGGAGTTTCTGGCTGCCCGGATTAACCCTATCCACTCCAGAGGG +
Preference number: 5 (lower is better)
Translates to: ICPPGKSAIASRVCS*EFLAARINPIHSRG
Trigger: CCCTCTGGAGTGGATAGGGTTAATCCGGGCAGCCAGAAACTCCCAGGAACAGACTCTGGAAGCTATTGCAGACTTACCCGGAGGACAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTCCAGGGTGGCGGGACTaGACATGTCGCTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFPGWRD*TCRSRS
Trigger: GGACCTGGAGCGACATGTCAAGTCCCGCCACCCTGG...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp GTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGGTTTTCACTGTCGTCGCTCTaGGGATCCCCAGGCTCCGGG +
Preference number: 5 (lower is better)
Translates to: VGPLTVSNLAPSQKQKRFSLSSL*GSPGSG
Trigger: CCCGGAGCCTGGGGATCCCAAGAGCGACGACAGTGA...AAACCGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTGAAGAGGCCTCGCGCTaGATGCCCTCCCGCGCACCG +
Preference number: 5 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLEEASR*MPSRAP
Trigger: CGGTGCGCGGGAGGGCATCAAGCGCGAGGCCTCTTC...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CAACTTGACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGAGCGAGGCCGGCTCCTaGCTTGCTGCTGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: QLDQFVHLLPLYIQWGKESEAGS*LAAALL
Trigger: GAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCT...CTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp ACTGTTGCTCTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTAGCCGGATGTGCTTGTaGAGATTGCTGGGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: TVALSFSTRCGTSHCFKSSRMCL*RLLGSP
Trigger: CGGCGACCCCAGCAATCTCAACAAGCACATCCGGCT...AGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAGAGCAACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AAACCAAAATACTATACCCACTGTACAGCAGTCATTATAAAACAACACACACCAGCCGAGGAAGTGCCCTaGTCCTCGGGCGGCTCCGCT +
Preference number: 5 (lower is better)
Translates to: KPKYYTHCTAVIIKQHTPAEEVP*SSGGSA
Trigger: AGCGGAGCCGCCCGAGGACAAGGGCACTTCCTCGGC...TGGTGTGTGTTGTTTTATAATGACTGCTGTACAGTGGGTATAGTATTTTGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGAGCGAGGCCGGCTCCTaGCTTGCTGCTGCTCTCCTC +
Preference number: 5 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMSEAGS*LAAALL
Trigger: GAGGAGAGCAGCAGCAAGCAAGGAGCCGGCCTCGCT...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp CTGAGTTTCAGCACCAGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTGCAACTTGACCAATTaGTACACCTGCTACCACTAT +
Preference number: 5 (lower is better)
Translates to: LSFSTRCGTSHCFKSGALCNLTN*YTCYHY
Trigger: ATAGTGGTAGCAGGTGTACAAATTGGTCAAGTTGCA...GAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCTGGTGCTGAAACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AGATGTGGGACCTCTCACTGTTTCAAATCTGGCGCCCTCTCAAAAACAAAAACGTGTGCCTTAAGGCTGTaGGGGTATCTAAACGTCCTC +
Preference number: 5 (lower is better)
Translates to: RCGTSHCFKSGALSKTKTCALRL*GYLNVL
Trigger: GAGGACGTTTAGATACCCCAACAGCCTTAAGGCACA...CGTTTTTGTTTTTGAGAGGGCGCCAGATTTGAAACAGTGAGAGGTCCCACATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp ACCAATTTGTACACCTGCTACCACTATATATTCAATGGGGCAAGGAGTAGTCTTCGGTCTGACAGGTACTaGCCCAGCTTGAAGGTACCA +
Preference number: 5 (lower is better)
Translates to: TNLYTCYHYIFNGARSSLRSDRY*PSLKVP
Trigger: TGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCG...AAGACTACTCCTTGCCCCATTGAATATATAGTGGTAGCAGGTGTACAAATTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AAACAAGTATATGGATGTCACATCTACCCAATTGTGACTAGTGTTTTGCCTATGAAAACAAAAACGGTTTaGTCCATTGGGTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: KQVYGCHIYPIVTSVLPMKTKTV*SIGSLF
Trigger: GAAGAGGGACCCAATGGACAAAACCGTTTTTGTTTT...CATAGGCAAAACACTAGTCACAATTGGGTAGATGTGACATCCATATACTTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS-3UTR CAA 90 bp AAACCAAAATACTATACCCACTGTACAGCAGTCATTATAAAACAACACACACCAAAAACAAAAACGGTTTaGTCCATTGGGTCCCTCTTC +
Preference number: 5 (lower is better)
Translates to: KPKYYTHCTAVIIKQHTPKTKTV*SIGSLF
Trigger: GAAGAGGGACCCAATGGACAAAACCGTTTTTGTTTT...TGGTGTGTGTTGTTTTATAATGACTGCTGTACAGTGGGTATAGTATTTTGGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS GCA 72 bp GCTGGTGGCTGGCGCTCTGGCGGCTCCGTGCATTGTTaGCGCCGCCACCAGGCAGGCGCTCGGGTGCTCCAG +
Preference number: 6 (lower is better)
Translates to: AGGWRSGGSVHC*RRHQAGARVLQ
Trigger: CTGGAGCACCCGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS GCA 72 bp GCACTCACGCTGGTGGCTGGCGCTCTGGCGGCTCCGTaGATTGTTGCCGCCGCCACCAGGCAGGCGCTCGGG +
Preference number: 6 (lower is better)
Translates to: ALTLVAGALAAP*IVAAATRQALG
Trigger: CCCGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CAA 72 bp CGCTGGTGGCTGGCGCTCTGGCGGCTCCGTGCATTGTaGCCGCCGCCACCAGGCAGGCGCTCGGGTGCTCCA +
Preference number: 6 (lower is better)
Translates to: RWWLALWRLRAL*PPPPGRRSGAP
Trigger: TGGAGCACCCGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CAA 90 bp CGGCACTCACGCTGGTGGCTGGCGCTCTGGCGGCTCCGTGCATTGTaGCCGCCGCCACCAGGCAGGCGCTCGGGTGCTCCAGGTCCTTGG +
Preference number: 6 (lower is better)
Translates to: RHSRWWLALWRLRAL*PPPPGRRSGAPGPW
Trigger: CCAAGGACCTGGAGCACCCGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS GCA 72 bp TACCAGGCACCGGTCCGAGGCGCAAGCCGGCCGGGATaGAGCAGTCGGCACTCACGCTGGTGGCTGGCGCTC +
Preference number: 6 (lower is better)
Translates to: YQAPVRGASRPG*SSRHSRWWLAL
Trigger: GAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCATCCCGGCCGGCTTGCGCCTCGGACCGGTGCCTGGTA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 72 bp CCGCCACCAGGCAGGCGCTCGGGTGCTCCAGGTCCTTaGAAGGGCGCGAGTGACAGAGCTGGAGCTGCGCGC +
Preference number: 6 (lower is better)
Translates to: PPPGRRSGAPGP*KGASDRAGAAR
Trigger: GCGCGCAGCTCCAGCTCTGTCACTCGCGCCCTTCCAAGGACCTGGAGCACCCGAGCGCCTGCCTGGTGGCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 72 bp GGCCGGGATGCAGCAGTCGGCACTCACGCTGGTGGCTaGCGCTCTGGCGGCTCCGTGCATTGTTGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: GRDAAVGTHAGG*RSGGSVHCCRR
Trigger: GCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCATCCCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CAA 72 bp TCACGCTGGTGGCTGGCGCTCTGGCGGCTCCGTGCATaGTTGCCGCCGCCACCAGGCAGGCGCTCGGGTGCT +
Preference number: 6 (lower is better)
Translates to: SRWWLALWRLRA*LPPPPGRRSGA
Trigger: AGCACCCGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CAA 90 bp AGTCGGCACTCACGCTGGTGGCTGGCGCTCTGGCGGCTCCGTGCATaGTTGCCGCCGCCACCAGGCAGGCGCTCGGGTGCTCCAGGTCCT +
Preference number: 6 (lower is better)
Translates to: SRHSRWWLALWRLRA*LPPPPGRRSGAPGP
Trigger: AGGACCTGGAGCACCCGAGCGCCTGCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 72 bp TGCAGCAGTCGGCACTCACGCTGGTGGCTGGCGCTCTaGCGGCTCCGTGCATTGTTGCCGCCGCCACCAGGC +
Preference number: 6 (lower is better)
Translates to: CSSRHSRWWLAL*RLRALLPPPPG
Trigger: GCCTGGTGGCGGCGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 72 bp AGCCGGCCGGGATGCAGCAGTCGGCACTCACGCTGGTaGCTGGCGCTCTGGCGGCTCCGTGCATTGTTGCCG +
Preference number: 6 (lower is better)
Translates to: SRPGCSSRHSRW*LALWRLRALLP
Trigger: CGGCAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCATCCCGGCCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CCA 72 bp GCAAGCCGGCCGGGATGCAGCAGTCGGCACTCACGCTaGTGGCTGGCGCTCTGGCGGCTCCGTGCATTGTTG +
Preference number: 6 (lower is better)
Translates to: ASRPGCSSRHSR*WLALWRLRALL
Trigger: CAACAATGCACGGAGCCGCCAGAGCGCCAGCCACCAGCGTGAGTGCCGACTGCTGCATCCCGGCCGGCTTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS TCA 72 bp CGGGCTCCCTGCGGTCTGACAGGTACTTGCCCAGCTTaGAGGTACCAGGCACCGGTCCGAGGCGCAAGCCGG +
Preference number: 6 (lower is better)
Translates to: RAPCGLTGTCPA*RYQAPVRGASR
Trigger: CCGGCTTGCGCCTCGGACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CAA 72 bp CCGGGCTCCCTGCGGTCTGACAGGTACTTGCCCAGCTaGAAGGTACCAGGCACCGGTCCGAGGCGCAAGCCG +
Preference number: 6 (lower is better)
Translates to: PGSLRSDRYLPS*KVPGTGPRRKP
Trigger: CGGCTTGCGCCTCGGACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CAA 90 bp TTCTTAGGCCCGGGCTCCCTGCGGTCTGACAGGTACTTGCCCAGCTaGAAGGTACCAGGCACCGGTCCGAGGCGCAAGCCGGCCGGGATG +
Preference number: 6 (lower is better)
Translates to: FLGPGSLRSDRYLPS*KVPGTGPRRKPAGM
Trigger: CATCCCGGCCGGCTTGCGCCTCGGACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCTAAGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CAA 90 bp TCGGGGCGGGAGCCTTTTGGCACCGCTAGCGCAAGGGCGCGGAGTTaGGTGAGAGAGTTGCGCTGCGAAGCAGCTGCAGAGTCCCACCCG +
Preference number: 6 (lower is better)
Translates to: SGREPFGTASARARS*VRELRCEAAAESHP
Trigger: CGGGTGGGACTCTGCAGCTGCTTCGCAGCGCAACTCTCTCACCAAACTCCGCGCCCTTGCGCTAGCGGTGCCAAAAGGCTCCCGCCCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS CAA 90 bp CGCACCTTTTTCTTAGGCCCGGGCTCCCTGCGGTCTGACAGGTACTaGCCCAGCTTGAAGGTACCAGGCACCGGTCCGAGGCGCAAGCCG +
Preference number: 6 (lower is better)
Translates to: RTFFLGPGSLRSDRY*PSLKVPGTGPRRKP
Trigger: CGGCTTGCGCCTCGGACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCTAAGAAAAAGGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369215.5
CDS GCA 72 bp AGCGCAAGGGCGCGGAGTTTGGTGAGAGAGTTGCGCTaGGAAGCAGCTGCAGAGTCCCACCCGAGAGGGTCA +
Preference number: 6 (lower is better)
Translates to: SARARSLVRELR*EAAAESHPRGS
Trigger: TGACCCTCTCGGGTGGGACTCTGCAGCTGCTTCGCAGCGCAACTCTCTCACCAAACTCCGCGCCCTTGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS CAA 72 bp TTCTTAGGCCCGGGCTCCCTGCGGTCTGACAGGTACTaGCCCAGCTTGAAGGTACCAGGCACCGGTCCGAGG +
Preference number: 6 (lower is better)
Translates to: FLGPGSLRSDRY*PSLKVPGTGPR
Trigger: CCTCGGACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCTAAGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5
CDS CAA 72 bp ACCGCTAGCGCAAGGGCGCGGAGTTTGGTGAGAGAGTaGCGCTGCGAAGCAGCTGCAGAGTCCCACCCGAGA +
Preference number: 6 (lower is better)
Translates to: TASARARSLVRE*RCEAAAESHPR
Trigger: TCTCGGGTGGGACTCTGCAGCTGCTTCGCAGCGCAACTCTCTCACCAAACTCCGCGCCCTTGCGCTAGCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS CAA 90 bp CCTTTTGGCACCGCTAGCGCAAGGGCGCGGAGTTTGGTGAGAGAGTaGCGCTGCGAAGCAGCTGCAGAGTCCCACCCGAGAGGGTCACAT +
Preference number: 6 (lower is better)
Translates to: PFGTASARARSLVRE*RCEAAAESHPRGSH
Trigger: ATGTGACCCTCTCGGGTGGGACTCTGCAGCTGCTTCGCAGCGCAACTCTCTCACCAAACTCCGCGCCCTTGCGCTAGCGGTGCCAAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS CAA 72 bp GAGCCTTTTGGCACCGCTAGCGCAAGGGCGCGGAGTTaGGTGAGAGAGTTGCGCTGCGAAGCAGCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: EPFGTASARARS*VRELRCEAAAE
Trigger: CTCTGCAGCTGCTTCGCAGCGCAACTCTCTCACCAAACTCCGCGCCCTTGCGCTAGCGGTGCCAAAAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS CAA 90 bp AATACCTTTTTCTTAGGCCCGGGCTCCCTGCGGTCTGACAGGTACTaGCCCAGCTTGAAGGTACCAGGCACCGGTCCGAGGCGCAAGCCG +
Preference number: 6 (lower is better)
Translates to: NTFFLGPGSLRSDRY*PSLKVPGTGPRRKP
Trigger: CGGCTTGCGCCTCGGACCGGTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCTAAGAAAAAGGTATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS TCA 72 bp GCGCACCTTTTTCTTAGGCCCGGGCTCCCTGCGGTCTaGCAGGTACTTGCCCAGCTTGAAGGTACCAGGCAC +
Preference number: 6 (lower is better)
Translates to: AHLFLRPGLPAV*QVLAQLEGTRH
Trigger: GTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCTAAGAAAAAGGTGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369215.5
CDS TCA 72 bp GCTCCCCTCTCACCATGCGCACAGTGGGCAGAGGTCTaGATGGTCAATACCTTTTTCTTAGGCCCGGGCTCC +
Preference number: 6 (lower is better)
Translates to: APLSPCAQWAEV*MVNTFFLGPGS
Trigger: GGAGCCCGGGCCTAAGAAAAAGGTATTGACCATTCAGACCTCTGCCCACTGTGCGCATGGTGAGAGGGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS TCA 72 bp CAATACCTTTTTCTTAGGCCCGGGCTCCCTGCGGTCTaGCAGGTACTTGCCCAGCTTGAAGGTACCAGGCAC +
Preference number: 6 (lower is better)
Translates to: QYLFLRPGLPAV*QVLAQLEGTRH
Trigger: GTGCCTGGTACCTTCAAGCTGGGCAAGTACCTGTCAGACCGCAGGGAGCCCGGGCCTAAGAAAAAGGTATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369214.2
CDS CCA 72 bp CAAGGAGTTAGAATACCACACTGTCAGCTCCTCCCCTaGCTGGACGTCTCGCAATGCTCGGTAGAAGATCTG +
Preference number: 6 (lower is better)
Translates to: QGVRIPHCQLLP*LDVSQCSVEDL
Trigger: CAGATCTTCTACCGAGCATTGCGAGACGTCCAGCCAGGGGAGGAGCTGACAGTGTGGTATTCTAACTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369214.2
ENST00000369215.5