RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDM10 (Homo sapiens)

Ensembl gene IDs: ENSG00000170325

Ensembl transcript IDs: ENST00000304538.10, ENST00000358825.9, ENST00000360871.8, ENST00000423662.6, ENST00000526082.5, ENST00000527581.5, ENST00000528746.5, ENST00000531431.1

Found 1026 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTCTTTCTAGACCGGACACTAGGATATTTGTAATCATTACACTGTaGGACTTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAA +
Preference number: 1 (lower is better)
Translates to: SLSRPDTRIFVIITL*DLGNPNLCFAMQGQ
Trigger: TTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAAGTCCCACAGTGTAATGATTACAAATATCCTAGTGTCCGGTCTAGAAAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR TCA 90 bp AATACTCACACTGGACTGAATGAAGTCTACAGTGTCAATGTGTCTTaGGAGAGGCCACAATATCCACACTGGCTACATACATGTTTTCCA +
Preference number: 1 (lower is better)
Translates to: NTHTGLNEVYSVNVS*ERPQYPHWLHTCFP
Trigger: TGGAAAACATGTATGTAGCCAGTGTGGATATTGTGGCCTCTCTCAAGACACATTGACACTGTAGACTTCATTCAGTCCAGTGTGAGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR TCA 90 bp AAAATCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATaGAGTCTACAGTGTCAATGTGTCTTGAGAGAGGCCACAATATCC +
Preference number: 1 (lower is better)
Translates to: KIYIQPTPKYSHWTE*SLQCQCVLREATIS
Trigger: GGATATTGTGGCCTCTCTCAAGACACATTGACACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR TCA 90 bp AAACAAAATCTACATCCAACCTACTCCAAAATACTCACACTGGACTaGATGAAGTCTACAGTGTCAATGTGTCTTGAGAGAGGCCACAAT +
Preference number: 1 (lower is better)
Translates to: KQNLHPTYSKILTLD*MKSTVSMCLERGHN
Trigger: ATTGTGGCCTCTCTCAAGACACATTGACACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGATTTTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR TCA 90 bp CAGTGTATGGATGAGAGACAAAACTGTGGTTTCCGAACTCTTGAGTaGATAATAAATCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCA +
Preference number: 1 (lower is better)
Translates to: QCMDERQNCGFRTLE*IINLTKELYVSELS
Trigger: TGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGATTTATTATTCACTCAAGAGTTCGGAAACCACAGTTTTGTCTCTCATCCATACACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR GCA 90 bp TGTAATCATTACACTGTGGGACTTAGGGAACCCGAACCTGTGTTTTaGAATGCAGGGTCAATATTTTCTGTTGAATATCTTTGTCACAAA +
Preference number: 1 (lower is better)
Translates to: CNHYTVGLREPEPVF*NAGSIFSVEYLCHK
Trigger: TTTGTGACAAAGATATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAAGTCCCACAGTGTAATGATTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACCCCAGTGTATGGATaGGAGACAAAACTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSTPVYG*ETKLWF
Trigger: AAACCACAGTTTTGTCTCTCATCCATACACTGGGGT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAACCCCAGTGTATGGATaGGAGACAAAACTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPTPVYG*ETKLWF
Trigger: AAACCACAGTTTTGTCTCTCATCCATACACTGGGGT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR CAA 90 bp AAGCAGTTCAGACCTAATGCACACCCACAAAATGCCCCTTCTCCTTaGGTGCCATGGCTTGGAATAAGAAGTCCAGTAACCATGAACTTG +
Preference number: 2 (lower is better)
Translates to: KQFRPNAHPQNAPSP*VPWLGIRSPVTMNL
Trigger: CAAGTTCATGGTTACTGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGTGCATTAGGTCTGAACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCCTGTCTCCACCTTTaGTATGAACACAATATGCCA +
Preference number: 2 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSCLHL*YEHNMP
Trigger: TGGCATATTGTGTTCATACCAAAGGTGGAGACAGGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAATAAACCCCAGTGTATaGATGAGAGACAAAACTGTG +
Preference number: 2 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPINPSV*MRDKTV
Trigger: CACAGTTTTGTCTCTCATCCATACACTGGGGTTTAT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCTGACCTAATCCACTaGGGACCAGCATCTGTGGAA +
Preference number: 2 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSDLIH*GPASVE
Trigger: TTCCACAGATGCTGGTCCTCAGTGGATTAGGTCAGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCAGAACATGAGCTTCTaGCCTAATCCACTGAGGACC +
Preference number: 2 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNQNMSF*PNPLRT
Trigger: GGTCCTCAGTGGATTAGGTCAGAAGCTCATGTTCTG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATACCCCAGTGTATGGATaGGAGACAAAACTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYTPVYG*ETKLWF
Trigger: AAACCACAGTTTTGTCTCTCATCCATACACTGGGGT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTACCCCAGTGTATGGATaGGAGACAAAACTGTGGTTT +
Preference number: 2 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSTPVYG*ETKLWF
Trigger: AAACCACAGTTTTGTCTCTCATCCATACACTGGGGT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGGGTTTAGATTCTGCTaGCATCAAGCAGCCTTTTCT +
Preference number: 2 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSGFRFC*HQAAFS
Trigger: AGAAAAGGCTGCTTGATGTCAGCAGAATCTAAACCC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCTCCTTTGGTGCCATaGCTTGGAATAAGAAGTCCA +
Preference number: 2 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSPLVP*LGIRSP
Trigger: TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACAGAACATGAGCTTCTaGCCTAATCCACTGAGGACC +
Preference number: 2 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPQNMSF*PNPLRT
Trigger: GGTCCTCAGTGGATTAGGTCAGAAGCTCATGTTCTG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAATGTGCAGAATACCTaGTCTGAAAGCCATGCGATT +
Preference number: 2 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSNVQNT*SESHAI
Trigger: AATCGCATGGCTTTCAGATCAGGTATTCTGCACATT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATATAAACCCCAGTGTATaGATGAGAGACAAAACTGTG +
Preference number: 2 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYINPSV*MRDKTV
Trigger: CACAGTTTTGTCTCTCATCCATACACTGGGGTTTAT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCAAAAACCGAGGGTTTaGAGAGTCAATTTGATAAAG +
Preference number: 2 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYQKPRV*RVNLIK
Trigger: CTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACATAAACCCCAGTGTATaGATGAGAGACAAAACTGTG +
Preference number: 2 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDINPSV*MRDKTV
Trigger: CACAGTTTTGTCTCTCATCCATACACTGGGGTTTAT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATATAAACCCCAGTGTATaGATGAGAGACAAAACTGTG +
Preference number: 2 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNINPSV*MRDKTV
Trigger: CACAGTTTTGTCTCTCATCCATACACTGGGGTTTAT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTATGATAAATGGATCCTaGAAGGCAGAACAAAATTTC +
Preference number: 2 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSMINGS*KAEQNF
Trigger: GAAATTTTGTTCTGCCTTGCAGGATCCATTTATCAT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCCAGTAACCATGAACTaGGCACATCCTGTCTCCACC +
Preference number: 3 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNPVTMN*AHPVST
Trigger: GGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCAAAAACCGAGGGTTaGAAGAGTCAATTTGATAAA +
Preference number: 3 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPAKTEG*KSQFDK
Trigger: TTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR TCA 72 bp ACTGGACTGAATGAAGTCTACAGTGTCAATGTGTCTTaGGAGAGGCCACAATATCCACACTGGCTACATACA +
Preference number: 3 (lower is better)
Translates to: TGLNEVYSVNVS*ERPQYPHWLHT
Trigger: TGTATGTAGCCAGTGTGGATATTGTGGCCTCTCTCAAGACACATTGACACTGTAGACTTCATTCAGTCCAGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR TCA 72 bp ATCCAACCTACTCCAAAATACTCACACTGGACTGAATaGAGTCTACAGTGTCAATGTGTCTTGAGAGAGGCC +
Preference number: 3 (lower is better)
Translates to: IQPTPKYSHWTE*SLQCQCVLREA
Trigger: GGCCTCTCTCAAGACACATTGACACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR TCA 72 bp CTACATCCAACCTACTCCAAAATACTCACACTGGACTaGATGAAGTCTACAGTGTCAATGTGTCTTGAGAGA +
Preference number: 3 (lower is better)
Translates to: LHPTYSKILTLD*MKSTVSMCLER
Trigger: TCTCTCAAGACACATTGACACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAAATGCCCCTTCTCCTTaGGTGCCATGGCTTGGAATA +
Preference number: 3 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPNAPSP*VPWLGI
Trigger: TATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCCCTAAGTGTGAAGTaGACCGTCTTATTAAAAGGT +
Preference number: 3 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSLSVK*TVLLKG
Trigger: ACCTTTTAATAAGACGGTCAACTTCACACTTAGGGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCCCTAAGTGTGAAGTaGACCGTCTTATTAAAAGGT +
Preference number: 3 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSLSVK*TVLLKG
Trigger: ACCTTTTAATAAGACGGTCAACTTCACACTTAGGGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGCAAAAACCGAGGGTTaGAAGAGTCAATTTGATAAA +
Preference number: 3 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSAKTEG*KSQFDK
Trigger: TTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
3UTR-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGCAAAAACCGAGGGTTaGAAGAGTCAATTTGATAAA +
Preference number: 3 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPAKTEG*KSQFDK
Trigger: TTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATCGCCCTGGCCCGGGTaGGCACCGGCCGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSPWPG*APAGWG
Trigger: TCCCCAACCGGCCGGTGCTCACCCGGGCCAGGGCGA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGGCTGCCCAGATACCTaGGCGGAGGACGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSGCPDT*AEDGAE
Trigger: CTCGGCCCCGTCCTCCGCCCAGGTATCTGGGCAGCC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGCTGCCCAGATACCTaGGCGGAGGACGGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPGCPDT*AEDGAE
Trigger: CTCGGCCCCGTCCTCCGCCCAGGTATCTGGGCAGCC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTCGCCCTGGCCCGGGTaGGCACCGGCCGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSPWPG*APAGWG
Trigger: TCCCCAACCGGCCGGTGCTCACCCGGGCCAGGGCGA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCTGAGCCTGCTGGGCTaGGGGACTCAACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSLSLLG*GTQRLP
Trigger: GGGCAGCCGTTGAGTCCCTCAGCCCAGCAGGCTCAG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTGAGCCTGCTGGGCTaGGGGACTCAACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLSLLG*GTQRLP
Trigger: GGGCAGCCGTTGAGTCCCTCAGCCCAGCAGGCTCAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACGGGGCCAAACTGGGTaGGCTTGGGGATGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPRGQTG*AWGCAA
Trigger: AGCGGCGCATCCCCAAGCGCACCCAGTTTGGCCCCG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCGGGAGGGGTGGCGATaGTGCCCGTCAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSREGWR*CPSAGC
Trigger: ACACCCAGCTGACGGGCACCATCGCCACCCCTCCCG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGACTGCTGTGACTGGTaGGGGGAAGTGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSDCCDW*GEVAEA
Trigger: GGCCTCGGCCACTTCCCCTCACCAGTCACAGCAGTC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGACTGCTGTGACTGGTaGGGGGAAGTGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPDCCDW*GEVAEA
Trigger: GGCCTCGGCCACTTCCCCTCACCAGTCACAGCAGTC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCGGTTGGGGATCGGGTaGAAGGGGCCGTGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSRLGIG*KGPCFG
Trigger: TCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACGGTTGGGGATCGGGTaGAAGGGGCCGTGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPRLGIG*KGPCFG
Trigger: TCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGAGGGGTGGCGATGGTaGCCGTCAGCTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPEGWRW*PSAGCV
Trigger: CACACACCCAGCTGACGGGCACCATCGCCACCCCTC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGAGGGGTGGCGATGGTaGCCGTCAGCTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSEGWRW*PSAGCV
Trigger: CACACACCCAGCTGACGGGCACCATCGCCACCCCTC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAACACCACAAGTCGTGTaGGTCGAAGGGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPTPQVV*VEGPGR
Trigger: CCGCCCCGGCCCTTCGACCCACACGACTTGTGGTGT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCGCCCTGGCCCGGGTaGGCACCGGCCGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSPWPG*APAGWG
Trigger: TCCCCAACCGGCCGGTGCTCACCCGGGCCAGGGCGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCGCCCTGGCCCGGGTaGGCACCGGCCGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSPWPG*APAGWG
Trigger: TCCCCAACCGGCCGGTGCTCACCCGGGCCAGGGCGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACCGCTGGGGTGGCACTaGTCACAGCTGTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPPLGWH*SQLSSV
Trigger: CACTGACGACAGCTGTGATCAGTGCCACCCCAGCGG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACGTCGGCTGTCAGCGTaGTCTGGGTGGGCACCACGC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTRRLSA*SGWAPR
Trigger: GCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGGCCGGGGCGGGTCTaGCTCCCAGTCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGPGRV*LPVIQI
Trigger: GATCTGGATGACTGGGAGCCAGACCCGCCCCGGCCC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACCCCGGCCGTCGACCTaGACCGAATCGCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTPRPST*TESPLA
Trigger: GGCAAGAGGCGATTCGGTCCAGGTCGACGGCCGGGG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCTGTCAGCGTGCTCTaGGTGGGCACCACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPAVSVL*VGTTLS
Trigger: AGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCAGGTGGCTCGACCTaGACTCCACCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPAGGST*TPPERA
Trigger: TGCCCTCTCTGGTGGAGTCCAGGTCGAGCCACCTGC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGCAGGTGGCTCGACCTaGACTCCACCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSAGGST*TPPERA
Trigger: TGCCCTCTCTGGTGGAGTCCAGGTCGAGCCACCTGC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACGTCTTGGAGCGGCTaGTGCGGTCGGCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSTSWSG*CGRLSW
Trigger: CCAAGAAAGCCGACCGCATCAGCCGCTCCAAGACGT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAACGTCTTGGAGCGGCTaGTGCGGTCGGCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPTSWSG*CGRLSW
Trigger: CCAAGAAAGCCGACCGCATCAGCCGCTCCAAGACGT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGCAGCTGTATGTGCTaGGGCTGCTGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPCSCMC*GCWRPD
Trigger: GTCTGGCCTCCAGCAGCCTCAGCACATACAGCTGCA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCACAGTGGACTGCTGTaGCTGGTGAGGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSHSGLL*LVRGSG
Trigger: GCCACTTCCCCTCACCAGTCACAGCAGTCCACTGTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACACAGTGGACTGCTGTaGCTGGTGAGGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPHSGLL*LVRGSG
Trigger: GCCACTTCCCCTCACCAGTCACAGCAGTCCACTGTG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGACCGAATCGCCTCTTaGCTCGTCCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSDRIAS*LVPFLC
Trigger: GCAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACCACGCTCTCTTCATaGTGCGGCTGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSTTLSS*CGCRCR
Trigger: CCTGCACCTGCAGCCGCAGCATGAAGAGAGCGTGGT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCGTCGGCTGTCAGCGTaGTCTGGGTGGGCACCACGC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGRRLSA*SGWAPR
Trigger: GCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGATGCGCTTGGCTCTaGGCATGTCGTCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPGCAWL*ACRRLS
Trigger: TGACAGCCGACGACATGCGCAGAGCCAAGCGCATCC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAGTGATTTACCAGCATaGCGCGCCGCCGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSDLPA*RAAGSP
Trigger: TGGGCTTCCGGCGGCGCGGCATGCTGGTAAATCACT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCTCGGTGGGAGCTCTaGTCCTGGGTGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPARWEL*SWVVLQ
Trigger: CTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGCTCGGTGGGAGCTCTaGTCCTGGGTGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSARWEL*SWVVLQ
Trigger: CTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTCGGAGCTTCCGAATaGTCGGTGGGAGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVGASE*SVGALL
Trigger: GAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACAGGGAGTCACTGTGTaGAGGTGGCTCGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPQGVTV*RWLDLD
Trigger: GTCCAGGTCGAGCCACCTGCACACAGTGACTCCCTG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCAGGGAGTCACTGTGTaGAGGTGGCTCGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSQGVTV*RWLDLD
Trigger: GTCCAGGTCGAGCCACCTGCACACAGTGACTCCCTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGTCTGTCTGCAGCATaGACGACGTTGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPGLSAA*TTLGEG
Trigger: CCCCTCACCCAACGTCGTGCATGCTGCAGACAGACC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGGCCGGGGCGGGTCTaGCTCCCAGTCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGPGRV*LPVIQI
Trigger: GATCTGGATGACTGGGAGCCAGACCCGCCCCGGCCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCAAACTGGGTGCGCTTaGGGATGCGCCGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSQTGCA*GCAAWR
Trigger: TCTCCAAGCGGCGCATCCCCAAGCGCACCCAGTTTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCCCCGGCCGTCGACCTaGACCGAATCGCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGPRPST*TESPLA
Trigger: GGCAAGAGGCGATTCGGTCCAGGTCGACGGCCGGGG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATTCCCCTCCCGCCCATaGAAGCGTAAGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPFPSRP*KRKCWS
Trigger: GGACCAGCACTTACGCTTCCATGGGCGGGAGGGGAA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTTCCGAATGCTCGGTaGGAGCTCTGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLPNAR*ELCSWV
Trigger: CACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGCTCAGCATGGGGTCTaGCTCTCCAGGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTAQHGV*LSRTSG
Trigger: CCCGCTGGTCCTGGAGAGCCAGACCCCATGCTGAGC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCGGGAGGGGTGGCGATaGTGCCCGTCAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGREGWR*CPSAGC
Trigger: ACACCCAGCTGACGGGCACCATCGCCACCCCTCCCG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTCACTGTGTGCAGGTaGCTCGACCTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVTVCR*LDLDST
Trigger: GGTGGAGTCCAGGTCGAGCCACCTGCACACAGTGAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACCCGCCACCTCCAGGTaGTTCTTCCCGCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTPATSR*FFPPQS
Trigger: ACTCTGCGGCGGGAAGAACCACCTGGAGGTGGCGGG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGTACACCACCTGCTGTaGGGGGCGAACCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSVHHLL*GANLVI
Trigger: GATGACCAGGTTCGCCCCCCACAGCAGGTGGTGTAC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTACACCACCTGCTGTaGGGGGCGAACCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVHHLL*GANLVI
Trigger: GATGACCAGGTTCGCCCCCCACAGCAGGTGGTGTAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCAGCTCCGAGCCCCTaGCGAGAGGCCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSAPSP*REAPPR
Trigger: CCGTGGAGGGGCCTCTCGTCAGGGGCTCGGAGCTGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCAGCTCCGAGCCCCTaGCGAGAGGCCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSAPSP*REAPPR
Trigger: CCGTGGAGGGGCCTCTCGTCAGGGGCTCGGAGCTGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGTTCTGCTCCAGGTaGTTCTGGGCTGGCCGTACA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSRFCSR*FWAGRT
Trigger: TGTACGGCCAGCCCAGAATCACCTGGAGCAGAACCT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACCGCTGGGGTGGCACTaGTCACAGCTGTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTPLGWH*SQLSSV
Trigger: CACTGACGACAGCTGTGATCAGTGCCACCCCAGCGG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGTGGCCGAGGCCACTTaGACCACTTGCAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSVAEAT*TTCSCM
Trigger: CATACAGCTGCAAGTGGTTCAAGTGGCCTCGGCCAC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTGCCTAGAGGGGTCTaGAGAGTTGCCAAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLPRGV*RVAKGS
Trigger: CGACCCTTTGGCAACTCTGCAGACCCCTCTAGGCAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTTTGGCCTCCAGTCTaGCTAGAGGGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLWPPV*LEGSAE
Trigger: CTCTGCAGACCCCTCTAGGCAGACTGGAGGCCAAAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCGGGGCCAAACTGGGTaGGCTTGGGGATGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYRGQTG*AWGCAA
Trigger: AGCGGCGCATCCCCAAGCGCACCCAGTTTGGCCCCG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGCTGCTGCAGAGCCTaGCCCTGTGTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPCCCRA*PCVEEL
Trigger: CAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTGCTGCTGCAGAGCCTaGCCCTGTGTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSCCCRA*PCVEEL
Trigger: CAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCGATTTGGCTCGACTaGCATCCGCATCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPAIWLD*HPHLWL
Trigger: CAGCCAGAGATGCGGATGGCAGTCGAGCCAAATCGC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGCGATTTGGCTCGACTaGCATCCGCATCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSAIWLD*HPHLWL
Trigger: CAGCCAGAGATGCGGATGGCAGTCGAGCCAAATCGC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGTAGGAGGCACCATCTaGCGTGTACACCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSVGGTI*RVHHLL
Trigger: CAGCAGGTGGTGTACACGGCAGATGGTGCCTCCTAC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCAGCCTTTAAGCCTCTaGCCTCCCTCTGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSQPLSL*PPSAPS
Trigger: AGAAGGGGCAGAGGGAGGGCAGAGGCTTAAAGGCTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423662.6
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCACACCACAAGTCGTGTaGGTCGAAGGGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGTPQVV*VEGPGR
Trigger: CCGCCCCGGCCCTTCGACCCACACGACTTGTGGTGT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGGGGATGCGCCGCTTaGAGAACACCCCGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTWGCAA*RTPRPE
Trigger: TTCTGGGCGGGGTGTTCTCCAAGCGGCGCATCCCCA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTCAGCGTGCTCTGGGTaGGCACCACGCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSACSG*APRSLH
Trigger: ATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGCTGTCAGCGTGCTCTaGGTGGGCACCACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTAVSVL*VGTTLS
Trigger: AGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGCTCAGCATGGGGTCTaGCTCTCCAGGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGAQHGV*LSRTSG
Trigger: CCCGCTGGTCCTGGAGAGCCAGACCCCATGCTGAGC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAATGGTGCCCGTCAGCTaGGTGTGTGTGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPMVPVS*VCVLSM
Trigger: CATGCTGAGCACACACACCCAGCTGACGGGCACCAT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGAGCCTGCCCCTGTGTaGAAGAACTGCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSEPAPV*KNCPGC
Trigger: ACATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGCAGGTGGCTCGACCTaGACTCCACCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTAGGST*TPPERA
Trigger: TGCCCTCTCTGGTGGAGTCCAGGTCGAGCCACCTGC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCAGCATGCACGACGTTaGGTGAGGGGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSQHARR*VRGAGR
Trigger: TCTTCCAGCTCCCCTCACCCAACGTCGTGCATGCTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCGCCCTGGCCCGGGTaGGCACCGGCCGGTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSPWPG*APAGWG
Trigger: TCCCCAACCGGCCGGTGCTCACCCGGGCCAGGGCGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCCGCTGGGGTGGCACTaGTCACAGCTGTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGPLGWH*SQLSSV
Trigger: CACTGACGACAGCTGTGATCAGTGCCACCCCAGCGG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCTGAGCCTGCTGGGCTaGGGGACTCAACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSLSLLG*GTQRLP
Trigger: GGGCAGCCGTTGAGTCCCTCAGCCCAGCAGGCTCAG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCTGAGCCTGCTGGGCTaGGGGACTCAACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNLSLLG*GTQRLP
Trigger: GGGCAGCCGTTGAGTCCCTCAGCCCAGCAGGCTCAG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCTGAGCCTGCTGGGCTaGGGGACTCAACGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDLSLLG*GTQRLP
Trigger: GGGCAGCCGTTGAGTCCCTCAGCCCAGCAGGCTCAG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTCTGGACCATCCACTaGTGTGTAGGAGGCACCATC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLWTIH*CVGGTI
Trigger: GATGGTGCCTCCTACACATCAGTGGATGGTCCAGAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACACAGTGGACTGCTGTaGCTGGTGAGGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTHSGLL*LVRGSG
Trigger: GCCACTTCCCCTCACCAGTCACAGCAGTCCACTGTG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGGTTCGCTGGTGCCTaGTGGCACAAACAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTWFAGA*WHKQGA
Trigger: TGCGCCCTGTTTGTGCCAGCAGGCACCAGCGAACCA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCTTTTGGTTCGCTGGTaGCTGCTGGCACAAACAGGG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSLLVRW*LLAQTG
Trigger: CCCTGTTTGTGCCAGCAGGCACCAGCGAACCAAAAG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGGTGCAAGGGGCCGTaGTTCGGACACACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGCKGP*FGHTEA
Trigger: TGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCGGGGCCAAACTGGGTaGGCTTGGGGATGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMRGQTG*AWGCAA
Trigger: AGCGGCGCATCCCCAAGCGCACCCAGTTTGGCCCCG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCGGGGCCAAACTGGGTaGGCTTGGGGATGCGCCGCT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNRGQTG*AWGCAA
Trigger: AGCGGCGCATCCCCAAGCGCACCCAGTTTGGCCCCG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGACCGAATCGCCTCTTaGCTCGTCCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTDRIAS*LVPFLC
Trigger: GCAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAACCACGCTCTCTTCATaGTGCGGCTGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTTTLSS*CGCRCR
Trigger: CCTGCACCTGCAGCCGCAGCATGAAGAGAGCGTGGT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCGTCGGCTGTCAGCGTaGTCTGGGTGGGCACCACGC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMRRLSA*SGWAPR
Trigger: GCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGAGCTGCATTTCGGATaGGCTTGGCTCTGCGCATGT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSELHFG*AWLCAC
Trigger: ACATGCGCAGAGCCAAGCGCATCCGAAATGCAGCTC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGTCGGAGCTTCCGAATaGTCGGTGGGAGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTVGASE*SVGALL
Trigger: GAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGAC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGTCTTGCTGCTGTACTaGTTGGAGCAGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSVLLLY*LEQWGQ
Trigger: CTGTCCCCACTGCTCCAAGCAGTACAGCAGCAAGAC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTGGGCAGGTACGTGTaGTGCACAGAGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLGRYV*CTEEFC
Trigger: GCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCTGGGCAGGTACGTGTaGTGCACAGAGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSLGRYV*CTEEFC
Trigger: GCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACAGGGAGTCACTGTGTaGAGGTGGCTCGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTQGVTV*RWLDLD
Trigger: GTCCAGGTCGAGCCACCTGCACACAGTGACTCCCTG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACGGAAAGGTCTGTCTaGAGCATGCACGACGTTGGG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSTERSV*SMHDVG
Trigger: CCCAACGTCGTGCATGCTGCAGACAGACCTTTCCGT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACTGACCTGGATGTGCTaGACCTGGATGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTLTWMC*TWMACW
Trigger: CCAGCACGCCATCCAGGTGCAGCACATCCAGGTCAG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGAGGGACTCAACGGCTaGCCAGATACCTGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGEGLNG*PDTWAE
Trigger: CTCCGCCCAGGTATCTGGGCAGCCGTTGAGTCCCTC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGGACACCTGCTTTTaGTTCGCTGGTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSMDTCF*FAGACW
Trigger: CCAGCAGGCACCAGCGAACCAAAAGCAGGTGTCCAT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGGCCGGGGCGGGTCTaGCTCCCAGTCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGPGRV*LPVIQI
Trigger: GATCTGGATGACTGGGAGCCAGACCCGCCCCGGCCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGGCCGGGGCGGGTCTaGCTCCCAGTCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGPGRV*LPVIQI
Trigger: GATCTGGATGACTGGGAGCCAGACCCGCCCCGGCCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATACACCACAAGTCGTGTaGGTCGAAGGGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYTPQVV*VEGPGR
Trigger: CCGCCCCGGCCCTTCGACCCACACGACTTGTGGTGT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCCCCGGCCGTCGACCTaGACCGAATCGCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMPRPST*TESPLA
Trigger: GGCAAGAGGCGATTCGGTCCAGGTCGACGGCCGGGG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCCCGGCCGTCGACCTaGACCGAATCGCCTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPRPST*TESPLA
Trigger: GGCAAGAGGCGATTCGGTCCAGGTCGACGGCCGGGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATTCCCCTCCCGCCCATaGAAGCGTAAGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTFPSRP*KRKCWS
Trigger: GGACCAGCACTTACGCTTCCATGGGCGGGAGGGGAA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCGGGAGGGGTGGCGATaGTGCCCGTCAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDREGWR*CPSAGC
Trigger: ACACCCAGCTGACGGGCACCATCGCCACCCCTCCCG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCGGGAGGGGTGGCGATaGTGCCCGTCAGCTGGGTGT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNREGWR*CPSAGC
Trigger: ACACCCAGCTGACGGGCACCATCGCCACCCCTCCCG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGTCACTGTGTGCAGGTaGCTCGACCTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTVTVCR*LDLDST
Trigger: GGTGGAGTCCAGGTCGAGCCACCTGCACACAGTGAC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCCCGCCACCTCCAGGTaGTTCTTCCCGCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYPATSR*FFPPQS
Trigger: ACTCTGCGGCGGGAAGAACCACCTGGAGGTGGCGGG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCCATCTTCTCCCAACTaGACAGCTCCACGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSPSSPN*TAPRLA
Trigger: TGCCAGACGTGGAGCTGTCCAGTTGGGAGAAGATGG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGCAGCTTCCACCGGGTaGATGTACACCAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTAASTG*MYTSVC
Trigger: GCACACGCTGGTGTACATCCACCCGGTGGAAGCTGC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGGCCAACATCCACAGTaGACTGCTGTGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSGQHPQ*TAVTGE
Trigger: CTCACCAGTCACAGCAGTCCACTGTGGATGTTGGCC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGTGCTTCGGACACACTaGAGCATGCGCGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSVLRTH*SMRVIA
Trigger: TGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCAC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAGGTTCTGCTCCAGGTaGTTCTGGGCTGGCCGTACA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTRFCSR*FWAGRT
Trigger: TGTACGGCCAGCCCAGAATCACCTGGAGCAGAACCT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCCGCTGGGGTGGCACTaGTCACAGCTGTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYPLGWH*SQLSSV
Trigger: CACTGACGACAGCTGTGATCAGTGCCACCCCAGCGG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACTGTCATTGCTTGGGTaGGCAGGTCCGTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTLSLLG*AGPSSP
Trigger: TGGTGACGACGGACCTGCTCACCCAAGCAATGACAG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTGCAGCTGTATGTGCTaGGGCTGCTGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGCSCMC*GCWRPD
Trigger: GTCTGGCCTCCAGCAGCCTCAGCACATACAGCTGCA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCCACACGTGTGTTCATaGAGGACGGAAAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSPHVCS*RTERSV
Trigger: GACAGACCTTTCCGTCCTTCATGAACACACGTGTGG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGTGGCCGAGGCCACTTaGACCACTTGCAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTVAEAT*TTCSCM
Trigger: CATACAGCTGCAAGTGGTTCAAGTGGCCTCGGCCAC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGACTGCTGTGACTGGTaGGGGGAAGTGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNDCCDW*GEVAEA
Trigger: GGCCTCGGCCACTTCCCCTCACCAGTCACAGCAGTC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGACTGCTGTGACTGGTaGGGGGAAGTGGCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDDCCDW*GEVAEA
Trigger: GGCCTCGGCCACTTCCCCTCACCAGTCACAGCAGTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCACAGTGGACTGCTGTaGCTGGTGAGGGGAAGTGGC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGHSGLL*LVRGSG
Trigger: GCCACTTCCCCTCACCAGTCACAGCAGTCCACTGTG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCGGTTGGGGATCGGGTaGAAGGGGCCGTGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDRLGIG*KGPCFG
Trigger: TCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCACCACGCTCTCTTCATaGTGCGGCTGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGTTLSS*CGCRCR
Trigger: CCTGCACCTGCAGCCGCAGCATGAAGAGAGCGTGGT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGATGCGCTTGGCTCTaGGCATGTCGTCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGCAWL*ACRRLS
Trigger: TGACAGCCGACGACATGCGCAGAGCCAAGCGCATCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACAGATGCTGAAGAGCTaGATTTCGGATGCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPQMLKS*ISDALG
Trigger: GCCAAGCGCATCCGAAATGCAGCTCTTCAGCATCTG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCAGATGCTGAAGAGCTaGATTTCGGATGCGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSQMLKS*ISDALG
Trigger: GCCAAGCGCATCCGAAATGCAGCTCTTCAGCATCTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAACACAGGAAGTCTTTaGGGTCCGAATGCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPNTGSL*GPNAGA
Trigger: TGCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGAGGGGTGGCGATGGTaGCCGTCAGCTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDEGWRW*PSAGCV
Trigger: CACACACCCAGCTGACGGGCACCATCGCCACCCCTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGAGGGGTGGCGATGGTaGCCGTCAGCTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNEGWRW*PSAGCV
Trigger: CACACACCCAGCTGACGGGCACCATCGCCACCCCTC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGAGGGGTGGCGATGGTaGCCGTCAGCTGGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSEGWRW*PSAGCV
Trigger: CACACACCCAGCTGACGGGCACCATCGCCACCCCTC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGACAGTTCTGTCATTaGTTGGGTGAGCAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPGQFCH*LGEQVR
Trigger: ACGGACCTGCTCACCCAAGCAATGACAGAACTGTCC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGAGGGACTCAACGGCTaGCCAGATACCGAGGCCACT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGEGLNG*PDTEAT
Trigger: AGTGGCCTCGGTATCTGGGCAGCCGTTGAGTCCCTC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304538.10
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGCACACCCACAAAATaGCCCTTCTCCTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPCTPTK*PFSFGA
Trigger: GGCACCAAAGGAGAAGGGGCATTTTGTGGGTGTGCA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGCAGCTCCAATCGGATaGGCTTGGCTCTGCGCATGT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTAAPIG*AWLCAC
Trigger: ACATGCGCAGAGCCAAGCGCATCCGATTGGAGCTGC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAACAGGGCGCAAGGGCTaGCTGAAATCTAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPTGRKG*LKSSLP
Trigger: AGGAAGACTAGATTTCAGCCAGCCCTTGCGCCCTGT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTTCGCTGGTGCCTGCTaGCACAAACAGGGCGCAAGG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGFAGAC*HKQGAR
Trigger: CCTTGCGCCCTGTTTGTGCCAGCAGGCACCAGCGAA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACACACCACAAGTCGTGTaGGTCGAAGGGCCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDTPQVV*VEGPGR
Trigger: CCGCCCCGGCCCTTCGACCCACACGACTTGTGGTGT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCAAACTGGGTGCGCTTaGGGATGCGCCGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGQTGCA*GCAAWR
Trigger: TCTCCAAGCGGCGCATCCCCAAGCGCACCCAGTTTG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTGGCAGCTGAGGGATTaGGATAGTGGTCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSWQLRD*DSGLFW
Trigger: CCAGAACAGACCACTATCCCAATCCCTCAGCTGCCA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATCAGCGTGCTCTGGGTaGGCACCACGCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSACSG*APRSLH
Trigger: ATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACATTTCGGATGCGCTTaGCTCTGCGCATGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTHFGCA*LCACRR
Trigger: CCGACGACATGCGCAGAGCCAAGCGCATCCGAAATG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGAGTGGAGCTTCATGTaGCTCTCCAAGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPEWSFM*LSKDVL
Trigger: CAGCACATCCTTGGAGAGCCACATGAAGCTCCACTC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTCTTCTGGTCTGAGTaGAGCTTCATGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVFWSE*SFMWLS
Trigger: GGAGAGCCACATGAAGCTCCACTCAGACCAGAAGAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTGGGAGCTCTGCTCCTaGGTGGTTCTTCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSWELCS*VVLQNV
Trigger: CACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGCTCAGCATGGGGTCTaGCTCTCCAGGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDAQHGV*LSRTSG
Trigger: CCCGCTGGTCCTGGAGAGCCAGACCCCATGCTGAGC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGCTCAGCATGGGGTCTaGCTCTCCAGGACCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNAQHGV*LSRTSG
Trigger: CCCGCTGGTCCTGGAGAGCCAGACCCCATGCTGAGC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGTGTGTGCTCAGCATaGGGTCTGGCTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTCVCSA*GLALQD
Trigger: GTCCTGGAGAGCCAGACCCCATGCTGAGCACACACA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAGCAGACGGGAGGGGTaGCGATGGTGCCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSRREG*RWCPSA
Trigger: AGCTGACGGGCACCATCGCCACCCCTCCCGTCTGCT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATAGCAGACGGGAGGGGTaGCGATGGTGCCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSRREG*RWCPSA
Trigger: AGCTGACGGGCACCATCGCCACCCCTCCCGTCTGCT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAGCAGACGGGAGGGGTaGCGATGGTGCCCGTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSRREG*RWCPSA
Trigger: AGCTGACGGGCACCATCGCCACCCCTCCCGTCTGCT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAATGGTGTTGGAGAGCTaGGCGAACTCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPMVLES*ANSGCF
Trigger: GAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCAT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGGTGTTGGAGAGCTaGGCGAACTCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSMVLES*ANSGCF
Trigger: GAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCAT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTGTGTGTATGGTGTTaGAGAGCTGGGCGAACTCTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVCVWC*RAGRTL
Trigger: CAGAGTTCGCCCAGCTCTCCAACACCATACACACAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTTCTGTCATTGCTTaGGTGAGCAGGTCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSSVIA*VSRSVV
Trigger: GACGACGGACCTGCTCACCCAAGCAATGACAGAACT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCTGGTAATCCCCTTGTaGCGTTCGGTAGTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSLVIPL*RSVVCR
Trigger: ACGACAGACTACCGAACGCCACAAGGGGATTACCAG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAGGAATTCCAAGCACTaGGCAGGTACGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPRNSKH*AGTCAA
Trigger: TGCAGCACACGTACCTGCCCAGTGCTTGGAATTCCT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTGGCCAGTAGTAACTaGAGTTGCCACACCACTGTC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLASSN*SCHTTV
Trigger: GACAGTGGTGTGGCAACTCCAGTTACTACTGGCCAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGTTGGCTGTTGGTCTaGGGGTCCAGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTCWLLV*GSRESL
Trigger: CAGTGACTCCCTGGACCCCCAGACCAACAGCCAACA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATCTGCTGTTGGCTGTTaGTCTGGGGGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSAVGC*SGGPGS
Trigger: ACTCCCTGGACCCCCAGACCAACAGCCAACAGCAGA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCCCGCCACCTCCAGGTaGTTCTTCCCGCCGCAGAGT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNPATSR*FFPPQS
Trigger: ACTCTGCGGCGGGAAGAACCACCTGGAGGTGGCGGG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTTGGGTGAGGGGAGCTaGAAGATCAGCGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYLGEGS*KISGSP
Trigger: CGGGGACCCGCTGATCTTCCAGCTCCCCTCACCCAA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGCAGCTTCCACCGGGTaGATGTACACCAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGAASTG*MYTSVC
Trigger: GCACACGCTGGTGTACATCCACCCGGTGGAAGCTGC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCAGCTCCGAGCCCCTaGCGAGAGGCCCCTCCACGG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSAPSP*REAPPR
Trigger: CCGTGGAGGGGCCTCTCGTCAGGGGCTCGGAGCTGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGTTTCCTGTGGCAGCTaGGGGATTGGGATAGTGGTC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTVSCGS*GIGIVV
Trigger: GACCACTATCCCAATCCCTCAGCTGCCACAGGAAAC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGTAAGTCTTCTGGTCTaGGTGGAGCTTCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSVSLLV*VELHVA
Trigger: AGCCACATGAAGCTCCACTCAGACCAGAAGACTTAC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCCGCTGGGGTGGCACTaGTCACAGCTGTCGTCAGTG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNPLGWH*SQLSSV
Trigger: CACTGACGACAGCTGTGATCAGTGCCACCCCAGCGG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCTGTCATTGCTTGGGTaGGCAGGTCCGTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGLSLLG*AGPSSP
Trigger: TGGTGACGACGGACCTGCTCACCCAAGCAATGACAG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCAGAACATGAGCTTCTaGCCTAATCCACTGAGGACC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSQNMSF*PNPLRT
Trigger: GGTCCTCAGTGGATTAGGTCAGAAGCTCATGTTCTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGTGGCCGAGGCCACTTaGACCACTTGCAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGVAEAT*TTCSCM
Trigger: CATACAGCTGCAAGTGGTTCAAGTGGCCTCGGCCAC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCTGCCTAGAGGGGTCTaGAGAGTTGCCAAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGLPRGV*RVAKGS
Trigger: CGACCCTTTGGCAACTCTGCAGACCCCTCTAGGCAG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGGGTGCAAGGGGCCGTaGTTCGGACACACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYGCKGP*FGHTEA
Trigger: TGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGACCGAATCGCCTCTTaGCTCGTCCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYDRIAS*LVPFLC
Trigger: GCAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACCATCTTGGTCTTGCTaGTGTACTGCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPPSWSC*CTAWSS
Trigger: ACTGCTCCAAGCAGTACAGCAGCAAGACCAAGATGG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGCAGGTACGTGTGCTaGACAGAGGAATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGRYVC*TEEFCC
Trigger: GCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAATGTACTGTGTGGTCTaGTGTTGGCTGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPMYCVV*CWLLVW
Trigger: CCAGACCAACAGCCAACAGCAGACCACACAGTACAT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGTACTGTGTGGTCTaGTGTTGGCTGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSMYCVV*CWLLVW
Trigger: CCAGACCAACAGCCAACAGCAGACCACACAGTACAT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGCGGCATTCTGTTCATaGTCTGCAGATGTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTAAFCS*SADVGH
Trigger: GTGGCCGACATCTGCAGAGCATGAACAGAATGCCGC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGTAAACAGAGTCTGTaGAGCTTCCACCGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPCKQSL*SFHRVD
Trigger: ATCCACCCGGTGGAAGCTGCACAGACTCTGTTTACA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGAGGGACTCAACGGCTaGCCAGATACCTGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNEGLNG*PDTWAE
Trigger: CTCCGCCCAGGTATCTGGGCAGCCGTTGAGTCCCTC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGCAGCTCCAATCGGATaGGCTTGGCTCTGCGCATGT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGAAPIG*AWLCAC
Trigger: ACATGCGCAGAGCCAAGCGCATCCGATTGGAGCTGC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGATACCTGGATGTGCTaGACCTGGATGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGDTWMC*TWMACW
Trigger: CCAGCACGCCATCCAGGTGCAGCACATCCAGGTATC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCTTTGGCCTCCAGTCTaGCTAGAGGGGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGLWPPV*LEGSAE
Trigger: CTCAGCAGACCCCTCTAGGCAGACTGGAGGCCAAAG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGGGGATGCGCCGCTTaGAGAACACCCCGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMWGCAA*RTPRPE
Trigger: TTCTGGGCGGGGTGTTCTCCAAGCGGCGCATCCCCA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTGGGGATGCGCCGCTTaGAGAACACCCCGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDWGCAA*RTPRPE
Trigger: TTCTGGGCGGGGTGTTCTCCAAGCGGCGCATCCCCA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTGGGGATGCGCCGCTTaGAGAACACCCCGCCCAGAA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSWGCAA*RTPRPE
Trigger: TTCTGGGCGGGGTGTTCTCCAAGCGGCGCATCCCCA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACAGGTGATTCTGGGCTaGCCGTACAAACATCATCCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPQVILG*PYKHHP
Trigger: TGGATGATGTTTGTACGGCCAGCCCAGAATCACCTG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCAGGCGGATAAATTTTaGAGGACGCCCCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYQADKF*RTPRPS
Trigger: CGACGGCCGGGGCGTCCTCCAAAATTTATCCGCCTG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGCTGTCAGCGTGCTCTaGGTGGGCACCACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDAVSVL*VGTTLS
Trigger: AGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTTCCCCTCCCGCCCATaGAAGCGTAAGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYFPSRP*KRKCWS
Trigger: GGACCAGCACTTACGCTTCCATGGGCGGGAGGGGAA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTGGTTCTTCAGAATGTaGGCTTTGCGCTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSWFFRM*ALRLLA
Trigger: TGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCTTCCGAATGCTCGGTaGGAGCTCTGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYLPNAR*ELCSWV
Trigger: CACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCATGGTGCCCGTCAGCTaGGTGTGTGTGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGMVPVS*VCVLSM
Trigger: CATGCTGAGCACACACACCCAGCTGACGGGCACCAT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTGTGCTGGACCATCTTaGTCTTGCTGCTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSCAGPS*SCCCTA
Trigger: AGCAGTACAGCAGCAAGACCAAGATGGTCCAGCACA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGAGCTGGGCGAACTCTaGATGCTTCTTTCGAATGTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPELGEL*MLLSNV
Trigger: CACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGAGCCTGCCCCTGTGTaGAAGAACTGCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGEPAPV*KNCPGC
Trigger: ACATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTAACCGCCTTCACCTaGCCAGTAGTAACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVTAFT*PVVTGV
Trigger: AACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGCAGGTGGCTCGACCTaGACTCCACCAGAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSAGGST*TPPERA
Trigger: TGCCCTCTCTGGTGGAGTCCAGGTCGAGCCACCTGC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTTGGGTGAGGGGAGCTaGAAGATCAGCGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDLGEGS*KISGSP
Trigger: CGGGGACCCGCTGATCTTCCAGCTCCCCTCACCCAA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTTGGGTGAGGGGAGCTaGAAGATCAGCGGGTCCCCG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSLGEGS*KISGSP
Trigger: CGGGGACCCGCTGATCTTCCAGCTCCCCTCACCCAA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGCTGCCCAGATACCTaGATGTGCTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGCPDT*MCCTWM
Trigger: CATCCAGGTGCAGCACATCCAGGTATCTGGGCAGCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGTTTCCTGTGGCAGCTaGGGGATTGGGATAGTGGTC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGVSCGS*GIGIVV
Trigger: GACCACTATCCCAATCCCTCAGCTGCCACAGGAAAC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGCAGGTGCAGGGTGTaGGTTTCTGGTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTCRCRV*VSGSCS
Trigger: GGAACATGAACCAGAAACTCACACCCTGCACCTGCA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGACGTCTTGGAGCGGCTaGTGCGGTCGGCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMTSWSG*CGRLSW
Trigger: CCAAGAAAGCCGACCGCATCAGCCGCTCCAAGACGT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTGCAGCTGTATGTGCTaGGGCTGCTGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNCSCMC*GCWRPD
Trigger: GTCTGGCCTCCAGCAGCCTCAGCACATACAGCTGCA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGCAGCTGTATGTGCTaGGGCTGCTGGAGGCCAGAC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMCSCMC*GCWRPD
Trigger: GTCTGGCCTCCAGCAGCCTCAGCACATACAGCTGCA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGAAGTCATGGTTTGGTaGTATGCACTTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSEVMVW*YALRCF
Trigger: GAAGCAGCGAAGTGCATATCACCAAACCATGACTTC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGAAGTCATGGTTTGGTaGTATGCACTTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPEVMVW*YALRCF
Trigger: GAAGCAGCGAAGTGCATATCACCAAACCATGACTTC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCAGAATACCTGATCTaGAAGCCATGCGATTTGGCT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPAEYLI*KPCDLA
Trigger: AGCCAAATCGCATGGCTTTCAGATCAGGTATTCTGC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGGCAGCACCTGGTTATaGACTGGCAATGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYGSTWL*TGNEAC
Trigger: GCAGGCCTCATTGCCAGTTCATAACCAGGTGCTGCC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAGCTGGCTTCATTTTTaGTCTGACTGCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSWLHF*SDCSQP
Trigger: AGGCTGTGAGCAGTCAGATCAAAAATGAAGCCAGCT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423662.6
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTGGTTCGCTGGTGCCTaGTGGCACAAACAGGGCGCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNWFAGA*WHKQGA
Trigger: TGCGCCCTGTTTGTGCCAGCAGGCACCAGCGAACCA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATAGGGGTCTGCAGAGTTaGCAAAGGGTCGGACCCATC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYRGLQS*QRVGPI
Trigger: GATGGGTCCGACCCTTTGGCAACTCTGCAGACCCCT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCTTTGGCCTCCAGTCTaGCTAGAGGGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYLWPPV*LEGSAE
Trigger: CTCTGCAGACCCCTCTAGGCAGACTGGAGGCCAAAG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAAGCATGCGCGTTATTaGACTCCTCACACCACAAGT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPKHARY*TPHTTS
Trigger: ACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAGCATGCGCGTTATTaGACTCCTCACACCACAAGT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSKHARY*TPHTTS
Trigger: ACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGGTGCAAGGGGCCGTaGTTCGGACACACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGCKGP*FGHTEA
Trigger: TGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGACCGAATCGCCTCTTaGCTCGTCCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMDRIAS*LVPFLC
Trigger: GCAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGACCGAATCGCCTCTTaGCTCGTCCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNDRIAS*LVPFLC
Trigger: GCAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTACCACGCTCTCTTCATaGTGCGGCTGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSTTLSS*CGCRCR
Trigger: CCTGCACCTGCAGCCGCAGCATGAAGAGAGCGTGGT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGACCACGCTCTCTTCATaGTGCGGCTGCAGGTGCAGG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMTTLSS*CGCRCR
Trigger: CCTGCACCTGCAGCCGCAGCATGAAGAGAGCGTGGT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACGTCGGCTGTCAGCGTaGTCTGGGTGGGCACCACGC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPRRLSA*SGWAPR
Trigger: GCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGATGCGCTTGGCTCTaGGCATGTCGTCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGCAWL*ACRRLS
Trigger: TGACAGCCGACGACATGCGCAGAGCCAAGCGCATCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGATGCGCTTGGCTCTaGGCATGTCGTCGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGCAWL*ACRRLS
Trigger: TGACAGCCGACGACATGCGCAGAGCCAAGCGCATCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCTTTGCGGTCCGAATaGCGGAGCATGTGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSLRSE*RSMWSR
Trigger: GCGACTCCACATGCTCCGGCATTCGGACCGCAAAGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAACACAGGAAGTCTTTaGGGTCCGAATGCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTNTGSL*GPNAGA
Trigger: TGCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCCCTCTCAGGATTATaGATCCTCTGCATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSLSGL*ILCMCS
Trigger: GGAACACATGCAGAGGATGCATAATCCTGAGAGGGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAGTGATTTACCAGCATaGCGCGCCGCCGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSDLPA*RAAGSP
Trigger: TGGGCTTCCGGCGGCGCGGCATGCTGGTAAATCACT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAGTGATTTACCAGCATaGCGCGCCGCCGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSDLPA*RAAGSP
Trigger: TGGGCTTCCGGCGGCGCGGCATGCTGGTAAATCACT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGCTCGGTGGGAGCTCTaGTCCTGGGTGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDARWEL*SWVVLQ
Trigger: CTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGCTCGGTGGGAGCTCTaGTCCTGGGTGGTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNARWEL*SWVVLQ
Trigger: CTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGTCGGAGCTTCCGAATaGTCGGTGGGAGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSVGASE*SVGALL
Trigger: GAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGAC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGTCGGAGCTTCCGAATaGTCGGTGGGAGCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMVGASE*SVGALL
Trigger: GAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGAC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCAGCTGGGTGTGTGTaGTCAGCATGGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSAGCV*SAWGLA
Trigger: AGCCAGACCCCATGCTGAGCACACACACCCAGCTGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGACCATCTTGGTCTTaGTGCTGTACTGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGPSWS*CCTAWS
Trigger: GCTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGACAGTTCTGTCATTaGTTGGGTGAGCAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGQFCH*LGEQVR
Trigger: ACGGACCTGCTCACCCAAGCAATGACAGAACTGTCC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTGCTGCTGCAGAGCCTaGCCCTGTGTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYCCCRA*PCVEEL
Trigger: CAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGCAGGTACGTGTGCTaGACAGAGGAATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGRYVC*TEEFCC
Trigger: GCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCTGGGCAGGTACGTGTaGTGCACAGAGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGLGRYV*CTEEFC
Trigger: GCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCAGGGAGTCACTGTGTaGAGGTGGCTCGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMQGVTV*RWLDLD
Trigger: GTCCAGGTCGAGCCACCTGCACACAGTGACTCCCTG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGCACACCCACAAAATaGCCCTTCTCCTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTCTPTK*PFSFGA
Trigger: GGCACCAAAGGAGAAGGGGCATTTTGTGGGTGTGCA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGTCTGTCTGCAGCATaGACGACGTTGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGLSAA*TTLGEG
Trigger: CCCCTCACCCAACGTCGTGCATGCTGCAGACAGACC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGATGTCGGCCACACATaGGAGCTTTCATCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSDVGHT*ELSSLE
Trigger: TTCCAAAGATGAAAGCTCGCATGTGTGGCCGACATC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATTCTGTTCATGCTCTaGAGATGTCGGCCACACATG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSILFML*RCRPHM
Trigger: CATGTGTGGCCGACATCTGCAGAGCATGAACAGAAT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAATTCTGTTCATGCTCTaGAGATGTCGGCCACACATG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPILFML*RCRPHM
Trigger: CATGTGTGGCCGACATCTGCAGAGCATGAACAGAAT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAACAAAGTGCACCTGTaGGGCATTCTGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPNKVHL*GILFML
Trigger: GAGCATGAACAGAATGCCGCACAGGTGCACTTTGTT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCTGACCTGGATGTGCTaGACCTGGATGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMLTWMC*TWMACW
Trigger: CCAGCACGCCATCCAGGTGCAGCACATCCAGGTCAG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGGCCGGGGCGGGTCTaGCTCCCAGTCATCCAGATC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGPGRV*LPVIQI
Trigger: GATCTGGATGACTGGGAGCCAGACCCGCCCCGGCCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCAAACTGGGTGCGCTTaGGGATGCGCCGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMQTGCA*GCAAWR
Trigger: TCTCCAAGCGGCGCATCCCCAAGCGCACCCAGTTTG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCAAACTGGGTGCGCTTaGGGATGCGCCGCTTGGAGA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDQTGCA*GCAAWR
Trigger: TCTCCAAGCGGCGCATCCCCAAGCGCACCCAGTTTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCAGGCGGATAAATTTTaGAGGACGCCCCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDQADKF*RTPRPS
Trigger: CGACGGCCGGGGCGTCCTCCAAAATTTATCCGCCTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCAGGCGGATAAATTTTaGAGGACGCCCCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMQADKF*RTPRPS
Trigger: CGACGGCCGGGGCGTCCTCCAAAATTTATCCGCCTG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCAGGCGGATAAATTTTaGAGGACGCCCCGGCCGTCG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNQADKF*RTPRPS
Trigger: CGACGGCCGGGGCGTCCTCCAAAATTTATCCGCCTG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCCCATTCAGAGTGGCTaGTTCAGCCTCATCAAATTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSPIQSG*FSLIKL
Trigger: CAATTTGATGAGGCTGAACCAGCCACTCTGAATGGG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACCAGCCCATTCAGAGTaGCTGGTTCAGCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTPAHSE*LVQPHQ
Trigger: TTGATGAGGCTGAACCAGCCACTCTGAATGGGCTGG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGATAGTGGTCTGTTCTaGTTGATCCAGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPDSGLF*LIQPIQ
Trigger: CTGAATGGGCTGGATCAACCAGAACAGACCACTATC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGGCAGCTGAGGGATTaGGATAGTGGTCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTWQLRD*DSGLFW
Trigger: CCAGAACAGACCACTATCCCAATCCCTCAGCTGCCA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCAGGGTGTGAGTTTCTaGTTCATGTTCCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSQGVSF*FMFQGR
Trigger: TCTTCCCTGGAACATGAACCAGAAACTCACACCCTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCATTTCGGATGCGCTTaGCTCTGCGCATGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYHFGCA*LCACRR
Trigger: CCGACGACATGCGCAGAGCCAAGCGCATCCGAAATG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGGAAGCGTAAGTGCTaGTCCAGTTTGTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPWKRKC*SSLSFS
Trigger: GGAAAAGGACAAACTGGACCAGCACTTACGCTTCCA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTTCCCCTCCCGCCCATaGAAGCGTAAGTGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMFPSRP*KRKCWS
Trigger: GGACCAGCACTTACGCTTCCATGGGCGGGAGGGGAA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGTCTTCTGGTCTGAGTaGAGCTTCATGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTVFWSE*SFMWLS
Trigger: GGAGAGCCACATGAAGCTCCACTCAGACCAGAAGAC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACCGTTTCTTACAAGTTaGGCAGGTGAAGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPPFLTS*AGEVAI
Trigger: GATGGCTACTTCACCTGCCCAACTTGTAAGAAACGG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGAATGCCGGAGCATGTaGAGTCGCAGTTTATCGGGG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGECRSM*SRSLSG
Trigger: CCCCGATAAACTGCGACTCCACATGCTCCGGCATTC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCTTCCGAATGCTCGGTaGGAGCTCTGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDLPNAR*ELCSWV
Trigger: CACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATATGGTGCCCGTCAGCTaGGTGTGTGTGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYMVPVS*VCVLSM
Trigger: CATGCTGAGCACACACACCCAGCTGACGGGCACCAT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTGCTGCTGTACTGCTTaGAGCAGTGGGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGCCCTA*SSGDSR
Trigger: TCTGCTGTCCCCACTGCTCCAAGCAGTACAGCAGCA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAATGGTGTTGGAGAGCTaGGCGAACTCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTMVLES*ANSGCF
Trigger: GAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCAT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATCAGTGGTGTGTGTATaGTGTTGGAGAGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSVVCV*CWRAGR
Trigger: TCGCCCAGCTCTCCAACACCATACACACACCACTGA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAGCCTGCCCCTGTGTaGAAGAACTGCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYEPAPV*KNCPGC
Trigger: ACATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAGGAATTCCAAGCACTaGGCAGGTACGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTRNSKH*AGTCAA
Trigger: TGCAGCACACGTACCTGCCCAGTGCTTGGAATTCCT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACTGGCCAGTAGTAACTaGAGTTGCCACACCACTGTC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTLASSN*SCHTTV
Trigger: GACAGTGGTGTGGCAACTCCAGTTACTACTGGCCAG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGTCACTGTGTGCAGGTaGCTCGACCTGGACTCCACC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDVTVCR*LDLDST
Trigger: GGTGGAGTCCAGGTCGAGCCACCTGCACACAGTGAC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCTGCTGTTGGCTGTTaGTCTGGGGGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSAVGC*SGGPGS
Trigger: ACTCCCTGGACCCCCAGACCAACAGCCAACAGCAGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACCAGGGTGGAAGTCATaGTTTGGTGATATGCACTTC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPPGWKS*FGDMHF
Trigger: GAAGTGCATATCACCAAACCATGACTTCCACCCTGG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGTACACCACCTGCTGTaGGGGGCGAACCTGGTCATC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMVHHLL*GANLVI
Trigger: GATGACCAGGTTCGCCCCCCACAGCAGGTGGTGTAC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGCAGCTTCCACCGGGTaGATGTACACCAGCGTGTGC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDAASTG*MYTSVC
Trigger: GCACACGCTGGTGTACATCCACCCGGTGGAAGCTGC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGCCAACATCCACAGTaGACTGCTGTGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGQHPQ*TAVTGE
Trigger: CTCACCAGTCACAGCAGTCCACTGTGGATGTTGGCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCAATCGGATGCGCTTaGCTCTGCGCATGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPIGCA*LCACRR
Trigger: CCGACGACATGCGCAGAGCCAAGCGCATCCGATTGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
3UTR CAA 72 bp AGACCTAATGCACACCCACAAAATGCCCCTTCTCCTTaGGTGCCATGGCTTGGAATAAGAAGTCCAGTAACC +
Preference number: 4 (lower is better)
Translates to: RPNAHPQNAPSP*VPWLGIRSPVT
Trigger: GGTTACTGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGTGCATTAGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGCAGCACCTGGTTATaGACTGGCAATGAGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGSTWL*TGNEAW
Trigger: CCAGGCCTCATTGCCAGTTCATAACCAGGTGCTGCC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAGGTTCTGCTCCAGGTaGTTCTGGGCTGGCCGTACA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSRFCSR*FWAGRT
Trigger: TGTACGGCCAGCCCAGAATCACCTGGAGCAGAACCT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTGCAGGTGCAGGGTGTaGGTTTCTGGTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGCRCRV*VSGSCS
Trigger: GGAACATGAACCAGAAACTCACACCCTGCACCTGCA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGTCTCTTCGATAAGTaGTTTACCAGCATGCCGCGC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTCLFDK*FTSMPR
Trigger: GCGCGGCATGCTGGTAAATCACTTATCGAAGAGACA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCTGTCATTGCTTGGGTaGGCAGGTCCGTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMLSLLG*AGPSSP
Trigger: TGGTGACGACGGACCTGCTCACCCAAGCAATGACAG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCTGTCATTGCTTGGGTaGGCAGGTCCGTCGTCACCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSLSLLG*AGPSSP
Trigger: TGGTGACGACGGACCTGCTCACCCAAGCAATGACAG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATCTGTAATCACAAACTaGCCCGGAGGAAGCGTCATC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSVITN*PGGSVI
Trigger: GATGACGCTTCCTCCGGGTCAGTTTGTGATTACAGA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATCTGACCTAATCCACTaGGGACCAGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSDLIH*GPASVE
Trigger: TTCCACAGATGCTGGTCCTCAGTGGATTAGGTCAGA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACAGAACATGAGCTTCTaGCCTAATCCACTGAGGACC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTQNMSF*PNPLRT
Trigger: GGTCCTCAGTGGATTAGGTCAGAAGCTCATGTTCTG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAGTGTCAATGTGTCTTaGGAGAGGCCACAATATCCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSVNVS*ERPQYP
Trigger: TGGATATTGTGGCCTCTCTCAAGACACATTGACACT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCTCTGGACCATCCACTaGTGTGTAGGAGGCACCATC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYLWTIH*CVGGTI
Trigger: GATGGTGCCTCCTACACATCAGTGGATGGTCCAGAG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGCAATGAGGCCTGCTaGGCTGTAGCATCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGNEAC*AVASCW
Trigger: CCAACAGGATGCTACAGCTCAGCAGGCCTCATTGCC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGCAGCACCTGGTTATaGACTGGCAATGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGSTWL*TGNEAC
Trigger: GCAGGCCTCATTGCCAGTTCATAACCAGGTGCTGCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCCTAGAGGGGTCTGCTaGGCTGTAGCATCCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMPRGVC*AVASCW
Trigger: CCAACAGGATGCTACAGCTCAGCAGACCCCTCTAGG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGCAGACATGGACACCTaGTTTTGGTTCGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYADMDT*FWFAGA
Trigger: GGCACCAGCGAACCAAAAGCAGGTGTCCATGTCTGC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAGGGGTCTGCAGAGTTaGCAAAGGGTCGGACCCATC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMRGLQS*QRVGPI
Trigger: GATGGGTCCGACCCTTTGGCAACTCTGCAGACCCCT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAGGGGTCTGCAGAGTTaGCAAAGGGTCGGACCCATC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSRGLQS*QRVGPI
Trigger: GATGGGTCCGACCCTTTGGCAACTCTGCAGACCCCT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCTGCCTAGAGGGGTCTaGAGAGTTGCCAAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDLPRGV*RVAKGS
Trigger: CGACCCTTTGGCAACTCTGCAGACCCCTCTAGGCAG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCTGCCTAGAGGGGTCTaGAGAGTTGCCAAAGGGTCG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMLPRGV*RVAKGS
Trigger: CGACCCTTTGGCAACTCTGCAGACCCCTCTAGGCAG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCTTTGGCCTCCAGTCTaGCTAGAGGGGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMLWPPV*LEGSAE
Trigger: CTCTGCAGACCCCTCTAGGCAGACTGGAGGCCAAAG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGACACACTGAAGCATaGGCGTTATTGCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGHTEA*ALLHSS
Trigger: TGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACGGTTGGGGATCGGGTaGAAGGGGCCGTGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPRLGIG*KGPCFG
Trigger: TCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAGATGCTGTTGCAACTaGTCCGAGCTTATAAATCGG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPRCCCN*SELINR
Trigger: CCGATTTATAAGCTCGGAGCAGTTGCAACAGCATCT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCTTTGCGGTCCGAATaGCGGAGCATGTGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSLRSE*RSMWSR
Trigger: GCGACTCCACATGCTCCGGCATTCGGACCGCAAAGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCTTTGCGGTCCGAATaGCGGAGCATGTGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSLRSE*RSMWSR
Trigger: GCGACTCCACATGCTCCGGCATTCGGACCGCAAAGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGGATTATGCATCCTCTaGATGTGTTCCCGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSGLCIL*MCSRSL
Trigger: CAAACTACGGGAACACATGCAGAGGATGCATAATCC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTCAGAATGTGGGCTTTaGGCTTGCTGGCACTTTTAT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSECGL*ACWHFY
Trigger: ATAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCAGCTGGGTGTGTGTaGTCAGCATGGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSAGCV*SAWGLA
Trigger: AGCCAGACCCCATGCTGAGCACACACACCCAGCTGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCAGCTGGGTGTGTGTaGTCAGCATGGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSAGCV*SAWGLA
Trigger: AGCCAGACCCCATGCTGAGCACACACACCCAGCTGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCAGCTGGGTGTGTGTaGTCAGCATGGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSAGCV*SAWGLA
Trigger: AGCCAGACCCCATGCTGAGCACACACACCCAGCTGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGTCTTGCTGCTGTACTaGTTGGAGCAGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYVLLLY*LEQWGQ
Trigger: CTGTCCCCACTGCTCCAAGCAGTACAGCAGCAAGAC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGACCATCTTGGTCTTaGTGCTGTACTGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGPSWS*CCTAWS
Trigger: GCTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTGCTTCTTTCGAATGTaGTGGACCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSCFFRM*WTILVL
Trigger: CAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGCTTCTTTCGAATGTaGTGGACCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPCFFRM*WTILVL
Trigger: CAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATGGGCGAACTCTGGATaGTTCTTTCGAATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTWANSG*FFRMCW
Trigger: CCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGCTGCTGCAGAGCCTaGCCCTGTGTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMCCCRA*PCVEEL
Trigger: CAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTGCTGCTGCAGAGCCTaGCCCTGTGTGGAAGAACTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDCCCRA*PCVEEL
Trigger: CAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAATGTACTGTGTGGTCTaGTGTTGGCTGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTMYCVV*CWLLVW
Trigger: CCAGACCAACAGCCAACAGCAGACCACACAGTACAT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTGCACACCCACAAAATaGCCCTTCTCCTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGCTPTK*PFSFGA
Trigger: GGCACCAAAGGAGAAGGGGCATTTTGTGGGTGTGCA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGCGATTTGGCTCGACTaGCATCCGCATCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSAIWLD*HPHLWL
Trigger: CAGCCAGAGATGCGGATGGCAGTCGAGCCAAATCGC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGCGATTTGGCTCGACTaGCATCCGCATCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDAIWLD*HPHLWL
Trigger: CAGCCAGAGATGCGGATGGCAGTCGAGCCAAATCGC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGCGATTTGGCTCGACTaGCATCCGCATCTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNAIWLD*HPHLWL
Trigger: CAGCCAGAGATGCGGATGGCAGTCGAGCCAAATCGC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGTAGGAGGCACCATCTaGCGTGTACACCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSVGGTI*RVHHLL
Trigger: CAGCAGGTGGTGTACACGGCAGATGGTGCCTCCTAC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGTAGGAGGCACCATCTaGCGTGTACACCACCTGCTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDVGGTI*RVHHLL
Trigger: CAGCAGGTGGTGTACACGGCAGATGGTGCCTCCTAC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACAGATGCTGAAGAGCTaGATTCTGCAGCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTQMLKS*ILQLQS
Trigger: CGATTGGAGCTGCAGAATGCAGCTCTTCAGCATCTG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGATACCTGGATGTGCTaGACCTGGATGGCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSDTWMC*TWMACW
Trigger: CCAGCACGCCATCCAGGTGCAGCACATCCAGGTATC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGAGGGACTCAACGGCTaGCCAGATACCTGGATGTGC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNEGLNG*PDTWMC
Trigger: GCACATCCAGGTATCTGGGCAGCCGTTGAGTCCCTC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGAGGGACTCAACGGCTaGCCAGATACCTGGATGTGC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMEGLNG*PDTWMC
Trigger: GCACATCCAGGTATCTGGGCAGCCGTTGAGTCCCTC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATATGGACACCTGCTTTTaGTTCGCTGGTGCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYMDTCF*FAGACW
Trigger: CCAGCAGGCACCAGCGAACCAAAAGCAGGTGTCCAT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACAGGTGATTCTGGGCTaGCCGTACAAACATCATCCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTQVILG*PYKHHP
Trigger: TGGATGATGTTTGTACGGCCAGCCCAGAATCACCTG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCAGCGTGCTCTGGGTaGGCACCACGCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSACSG*APRSLH
Trigger: ATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCATTTCGGATGCGCTTaGCTCTGCGCATGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNHFGCA*LCACRR
Trigger: CCGACGACATGCGCAGAGCCAAGCGCATCCGAAATG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAATGCCGGAGCATGTaGAGTCGCAGTTTATCGGGG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYECRSM*SRSLSG
Trigger: CCCCGATAAACTGCGACTCCACATGCTCCGGCATTC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTGCGGTCGGCTTTCTTaGCCTCCCTCTCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGCGRLS*PPSQDY
Trigger: ATAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTGGGAGCTCTGCTCCTaGGTGGTTCTTCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGWELCS*VVLQNV
Trigger: CACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGTGTGTGCTCAGCATaGGGTCTGGCTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMCVCSA*GLALQD
Trigger: GTCCTGGAGAGCCAGACCCCATGCTGAGCACACACA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTGTGTGTGCTCAGCATaGGGTCTGGCTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSCVCSA*GLALQD
Trigger: GTCCTGGAGAGCCAGACCCCATGCTGAGCACACACA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTGTGTGTGCTCAGCATaGGGTCTGGCTCTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDCVCSA*GLALQD
Trigger: GTCCTGGAGAGCCAGACCCCATGCTGAGCACACACA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATATGGTGCCCGTCAGCTaGGTGTGTGTGCTCAGCATG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNMVPVS*VCVLSM
Trigger: CATGCTGAGCACACACACCCAGCTGACGGGCACCAT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTGCTGCTGTACTGCTTaGAGCAGTGGGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYCCCTA*SSGDSR
Trigger: TCTGCTGTCCCCACTGCTCCAAGCAGTACAGCAGCA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATTCTTTCGAATGTGCTaGACCATCTTGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPFFRMC*TILVLL
Trigger: CAGCAAGACCAAGATGGTCCAGCACATTCGAAAGAA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGAGCTGGGCGAACTCTaGATGCTTCTTTCGAATGTG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTELGEL*MLLSNV
Trigger: CACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTCAGTGGTGTGTGTATaGTGTTGGAGAGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSVVCV*CWRAGR
Trigger: TCGCCCAGCTCTCCAACACCATACACACACCACTGA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCAGTTCTGTCATTGCTTaGGTGAGCAGGTCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSSVIA*VSRSVV
Trigger: GACGACGGACCTGCTCACCCAAGCAATGACAGAACT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCTGTCGTTAAGGTCTaGGACAGTTCTGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSVVKV*DSSVIA
Trigger: AGCAATGACAGAACTGTCCCAGACCTTAACGACAGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCTGGCCAGTAGTAACTaGAGTTGCCACACCACTGTC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGLASSN*SCHTTV
Trigger: GACAGTGGTGTGGCAACTCCAGTTACTACTGGCCAG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTGTTGGCTGTTGGTCTaGGGGTCCAGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNCWLLV*GSRESL
Trigger: CAGTGACTCCCTGGACCCCCAGACCAACAGCCAACA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGTTGGCTGTTGGTCTaGGGGTCCAGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMCWLLV*GSRESL
Trigger: CAGTGACTCCCTGGACCCCCAGACCAACAGCCAACA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCTGCTGTTGGCTGTTaGTCTGGGGGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSAVGC*SGGPGS
Trigger: ACTCCCTGGACCCCCAGACCAACAGCCAACAGCAGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCTGCTGTTGGCTGTTaGTCTGGGGGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSAVGC*SGGPGS
Trigger: ACTCCCTGGACCCCCAGACCAACAGCCAACAGCAGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATTCAAGCTCCAGGGTaGAAGTCATGGTTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSIQAPG*KSWFGD
Trigger: ATCACCAAACCATGACTTCCACCCTGGAGCTTGAAT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTAATCATTACACTGTaGGACTTAGGGAACCCGAAC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVIITL*DLGNPN
Trigger: GTTCGGGTTCCCTAAGTCCCACAGTGTAATGATTAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGTAATCATTACACTGTaGGACTTAGGGAACCCGAAC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSVIITL*DLGNPN
Trigger: GTTCGGGTTCCCTAAGTCCCACAGTGTAATGATTAC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCAGCATGCACGACGTTaGGTGAGGGGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDQHARR*VRGAGR
Trigger: TCTTCCAGCTCCCCTCACCCAACGTCGTGCATGCTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCAGCATGCACGACGTTaGGTGAGGGGAGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNQHARR*VRGAGR
Trigger: TCTTCCAGCTCCCCTCACCCAACGTCGTGCATGCTG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGTAGGCTCGCTGACCTaGATGTGCTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDVGSLT*MCCTWM
Trigger: CATCCAGGTGCAGCACATCCAGGTCAGCGAGCCTAC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGTAGGCTCGCTGACCTaGATGTGCTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNVGSLT*MCCTWM
Trigger: CATCCAGGTGCAGCACATCCAGGTCAGCGAGCCTAC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGCTGCCCAGATACCTaGATGTGCTGCACCTGGATG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGCPDT*MCCTWM
Trigger: CATCCAGGTGCAGCACATCCAGGTATCTGGGCAGCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCAGGCCCTGGAAAAATaGCTTCCATCTACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYQALEK*LPSTGC
Trigger: ACAGCCGGTAGATGGAAGTCATTTTTCCAGGGCCTG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGCGCAAGGGCTGGCTaGAATCTAGTCTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGARAG*NLVFLP
Trigger: TGGTAGGAAGACTAGATTTCAGCCAGCCCTTGCGCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGCGCAAGGGCTGGCTaGAATCTAGTCTTCCTACCA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGARAG*NLVFLP
Trigger: TGGTAGGAAGACTAGATTTCAGCCAGCCCTTGCGCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGTGCTTCGGACACACTaGAGCATGCGCGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYVLRTH*SMRVIA
Trigger: TGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCAC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGTGGTCTGTTCTGGTTaGTCCAGCCCATTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYVVCSG*SSPFRV
Trigger: CACTCTGAATGGGCTGGATCAACCAGAACAGACCAC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGTTTCCTGTGGCAGCTaGGGGATTGGGATAGTGGTC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDVSCGS*GIGIVV
Trigger: GACCACTATCCCAATCCCTCAGCTGCCACAGGAAAC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCTGGTAGATCTTTTCTaGGTGGAAGCTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYLVDLF*VEAAHV
Trigger: CACGTGCGCAGCTTCCACTCAGAAAAGATCTACCAG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACACGATTGGGTTTTATaGTGGGTAGAGTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPHDWVL*WVELTL
Trigger: CAGAGTTAACTCTACCCATCATAAAACCCAATCGTG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTCTGACCTAATCCACTaGGGACCAGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSDLIH*GPASVE
Trigger: TTCCACAGATGCTGGTCCTCAGTGGATTAGGTCAGA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGCAGAATACCTGATCTaGAAGCCATGCGATTTGGCT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTAEYLI*KPCDLA
Trigger: AGCCAAATCGCATGGCTTTCAGATCAGGTATTCTGC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAATGTGCAGAATACCTaGTCTGAAAGCCATGCGATT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPNVQNT*SESHAI
Trigger: AATCGCATGGCTTTCAGATCAGGTATTCTGCACATT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCACACTGGACTGAATaGAGTCTACAGTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSHWTE*SLQCQC
Trigger: ACATTGACACTGTAGACTTCATTCAGTCCAGTGTGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAATACTCACACTGGACTaGATGAAGTCTACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPILTLD*MKSTVS
Trigger: TGACACTGTAGACTTCATTCAGTCCAGTGTGAGTAT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACGAATAAACAGATGCTaGAGAGCTGCATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTRINRC*RAAFCS
Trigger: GCTGCAGAATGCAGCTCTTCAGCATCTGTTTATTCG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGCAGACATGGACACCTaGTTTTGGTTCGCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMADMDT*FWFAGA
Trigger: GGCACCAGCGAACCAAAAGCAGGTGTCCATGTCTGC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAAGCATGCGCGTTATTaGACTCCTCACACCACAAGT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTKHARY*TPHTTS
Trigger: ACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGACACACTGAAGCATaGGCGTTATTGCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGHTEA*ALLHSS
Trigger: TGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGGCCAATTCTTCTCTTaGTCTCGAAGAACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSGQFFS*SRRTFL
Trigger: AAGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGAGCTGCATTTCGGATaGGCTTGGCTCTGCGCATGT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMELHFG*AWLCAC
Trigger: ACATGCGCAGAGCCAAGCGCATCCGAAATGCAGCTC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATCCCTCTCAGGATTATaGATCCTCTGCATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSLSGL*ILCMCS
Trigger: GGAACACATGCAGAGGATGCATAATCCTGAGAGGGA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGTCTTGCTGCTGTACTaGTTGGAGCAGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDVLLLY*LEQWGQ
Trigger: CTGTCCCCACTGCTCCAAGCAGTACAGCAGCAAGAC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGTCTTGCTGCTGTACTaGTTGGAGCAGTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSVLLLY*LEQWGQ
Trigger: CTGTCCCCACTGCTCCAAGCAGTACAGCAGCAAGAC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGGACCATCTTGGTCTTaGTGCTGTACTGCTTGGAGC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYGPSWS*CCTAWS
Trigger: GCTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTGGGCGAACTCTGGATaGTTCTTTCGAATGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGWANSG*FFRMCW
Trigger: CCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGGCAGGTACGTGTGCTaGACAGAGGAATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSGRYVC*TEEFCC
Trigger: GCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGCAGGTACGTGTGCTaGACAGAGGAATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGRYVC*TEEFCC
Trigger: GCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCTGGGCAGGTACGTGTaGTGCACAGAGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNLGRYV*CTEEFC
Trigger: GCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCCCGAACCTGTGTTTTaGAATGCAGGGTCAATATTT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSPEPVF*NAGSIF
Trigger: AAATATTGACCCTGCATTGCAAAACACAGGTTCGGG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATACGGAAAGGTCTGTCTaGAGCATGCACGACGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNTERSV*SMHDVG
Trigger: CCCAACGTCGTGCATGCTGCAGACAGACCTTTCCGT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGCGGCATTCTGTTCATaGTCTGCAGATGTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSAAFCS*SADVGH
Trigger: GTGGCCGACATCTGCAGAGCATGAACAGAATGCCGC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGCGGCATTCTGTTCATaGTCTGCAGATGTCGGCCAC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMAAFCS*SADVGH
Trigger: GTGGCCGACATCTGCAGAGCATGAACAGAATGCCGC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTGTAAACAGAGTCTGTaGAGCTTCCACCGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGCKQSL*SFHRVD
Trigger: ATCCACCCGGTGGAAGCTGCACAGACTCTGTTTACA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCAGGTGATTCTGGGCTaGCCGTACAAACATCATCCA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGQVILG*PYKHHP
Trigger: TGGATGATGTTTGTACGGCCAGCCCAGAATCACCTG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGATAGTGGTCTGTTCTaGTTGATCCAGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTDSGLF*LIQPIQ
Trigger: CTGAATGGGCTGGATCAACCAGAACAGACCACTATC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATAGACTGGGTTTCCTGTaGCAGCTGAGGGATTGGGAT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYRLGFL*QLRDWD
Trigger: ATCCCAATCCCTCAGCTGCCACAGGAAACCCAGTCT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAGTGGAGCTTCATGTaGCTCTCCAAGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYEWSFM*LSKDVL
Trigger: CAGCACATCCTTGGAGAGCCACATGAAGCTCCACTC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGAATGCCGGAGCATGTaGAGTCGCAGTTTATCGGGG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSECRSM*SRSLSG
Trigger: CCCCGATAAACTGCGACTCCACATGCTCCGGCATTC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGGGCTTTGCGCTTGCTaGCACTTTTATAAACCTTAT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSGLCAC*HFYKPY
Trigger: ATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGGCTTTGCGCTTGCTaGCACTTTTATAAACCTTAT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPGLCAC*HFYKPY
Trigger: ATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATAGCTCTGCTCCTGGGTaGTTCTTCAGAATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSSAPG*FFRMWA
Trigger: AGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTGCTGCTGTACTGCTTaGAGCAGTGGGGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNCCCTA*SSGDSR
Trigger: TCTGCTGTCCCCACTGCTCCAAGCAGTACAGCAGCA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGTGTGTGTATGGTGTTaGAGAGCTGGGCGAACTCTG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYVCVWC*RAGRTL
Trigger: CAGAGTTCGCCCAGCTCTCCAACACCATACACACAC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATAGTTCTGTCATTGCTTaGGTGAGCAGGTCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSSVIA*VSRSVV
Trigger: GACGACGGACCTGCTCACCCAAGCAATGACAGAACT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATAGGAATTCCAAGCACTaGGCAGGTACGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYRNSKH*AGTCAA
Trigger: TGCAGCACACGTACCTGCCCAGTGCTTGGAATTCCT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGTAACCGCCTTCACCTaGCCAGTAGTAACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGVTAFT*PVVTGV
Trigger: AACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTAC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCCATCTTCTCCCAACTaGACAGCTCCACGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNPSSPN*TAPRLA
Trigger: TGCCAGACGTGGAGCTGTCCAGTTGGGAGAAGATGG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCCATCTTCTCCCAACTaGACAGCTCCACGTCTGGCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSPSSPN*TAPRLA
Trigger: TGCCAGACGTGGAGCTGTCCAGTTGGGAGAAGATGG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGCCAACATCCACAGTaGACTGCTGTGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGQHPQ*TAVTGE
Trigger: CTCACCAGTCACAGCAGTCCACTGTGGATGTTGGCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCAGGCCCTGGAAAAATaGCTTCCATCTACCGGCTGT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNQALEK*LPSTGC
Trigger: ACAGCCGGTAGATGGAAGTCATTTTTCCAGGGCCTG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGTGCTTCGGACACACTaGAGCATGCGCGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSVLRTH*SMRVIA
Trigger: TGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCAC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCCTCAGAAATGTCATaGATTTTCTGGTTCACGAAC +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSSEMS*IFWFTN
Trigger: GTTCGTGAACCAGAAAATTCATGACATTTCTGAGGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGTGGTCTGTTCTGGTTaGTCCAGCCCATTCAGAGTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDVVCSG*SSPFRV
Trigger: CACTCTGAATGGGCTGGATCAACCAGAACAGACCAC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGCAGGTGCAGGGTGTaGGTTTCTGGTTCATGTTCC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMCRCRV*VSGSCS
Trigger: GGAACATGAACCAGAAACTCACACCCTGCACCTGCA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCTGGTAGATCTTTTCTaGGTGGAAGCTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNLVDLF*VEAAHV
Trigger: CACGTGCGCAGCTTCCACTCAGAAAAGATCTACCAG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAACGTCTTGGAGCGGCTaGTGCGGTCGGCTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPTSWSG*CGRLSW
Trigger: CCAAGAAAGCCGACCGCATCAGCCGCTCCAAGACGT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTGTCTCTTCGATAAGTaGTTTACCAGCATGCCGCGC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYCLFDK*FTSMPR
Trigger: GCGCGGCATGCTGGTAAATCACTTATCGAAGAGACA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGATACCGAGGCCACTTaGACCACTTGCAGCTGTATG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDDTEAT*TTCSCM
Trigger: CATACAGCTGCAAGTGGTTCAAGTGGCCTCGGTATC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000304538.10
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCATTTGAATCTCAGATaGATAGCCACGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSHLNLR*IATEGI
Trigger: AATTCCTTCCGTGGCTATTCATCTGAGATTCAAATG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGAAGTCATGGTTTGGTaGTATGCACTTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGEVMVW*YALRCF
Trigger: GAAGCAGCGAAGTGCATATCACCAAACCATGACTTC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAACCCCAGTGTATGGATaGGAGACAAAACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTTPVYG*ETKLWF
Trigger: AAACCACAGTTTTGTCTCTCATCCATACACTGGGGT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCTGACCTAATCCACTaGGGACCAGCATCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSDLIH*GPASVE
Trigger: TTCCACAGATGCTGGTCCTCAGTGGATTAGGTCAGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCAGAACATGAGCTTCTaGCCTAATCCACTGAGGACC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYQNMSF*PNPLRT
Trigger: GGTCCTCAGTGGATTAGGTCAGAAGCTCATGTTCTG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGCAGAATACCTGATCTaGAAGCCATGCGATTTGGCT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGAEYLI*KPCDLA
Trigger: AGCCAAATCGCATGGCTTTCAGATCAGGTATTCTGC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCACACGTGTGTTCATaGAGGACGGAAAGGTCTGTC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPHVCS*RTERSV
Trigger: GACAGACCTTTCCGTCCTTCATGAACACACGTGTGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGTTATGAACTGGCAATaGGGCCTGCTGAGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNVMNWQ*GLLSCS
Trigger: GCTACAGCTCAGCAGGCCTCATTGCCAGTTCATAAC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000360871.8
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCAAGCATGCGCGTTATTaGACTCCTCACACCACAAGT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGKHARY*TPHTTS
Trigger: ACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGGACACACTGAAGCATaGGCGTTATTGCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYGHTEA*ALLHSS
Trigger: TGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGGTGCAAGGGGCCGTaGTTCGGACACACTGAAGCA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGCKGP*FGHTEA
Trigger: TGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAGATGCTGTTGCAACTaGTCCGAGCTTATAAATCGG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTRCCCN*SELINR
Trigger: CCGATTTATAAGCTCGGAGCAGTTGCAACAGCATCT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTCAGCCTCATCAAATTaGTCCTTTGTGGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSASSN*SFVGKC
Trigger: ACATTTTCCCACAAAGGAGCAATTTGATGAGGCTGA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAACACAGGAAGTCTTTaGGGTCCGAATGCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDNTGSL*GPNAGA
Trigger: TGCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAACACAGGAAGTCTTTaGGGTCCGAATGCCGGAGCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSNTGSL*GPNAGA
Trigger: TGCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGATTATGCATCCTCTaGATGTGTTCCCGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGLCIL*MCSRSL
Trigger: CAAACTACGGGAACACATGCAGAGGATGCATAATCC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAAGTGATTTACCAGCATaGCGCGCCGCCGGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSDLPA*RAAGSP
Trigger: TGGGCTTCCGGCGGCGCGGCATGCTGGTAAATCACT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCCATCTTGGTCTTGCTaGTGTACTGCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYPSWSC*CTAWSS
Trigger: ACTGCTCCAAGCAGTACAGCAGCAAGACCAAGATGG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGGACAGTTCTGTCATTaGTTGGGTGAGCAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSGQFCH*LGEQVR
Trigger: ACGGACCTGCTCACCCAAGCAATGACAGAACTGTCC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGACAGTTCTGTCATTaGTTGGGTGAGCAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGQFCH*LGEQVR
Trigger: ACGGACCTGCTCACCCAAGCAATGACAGAACTGTCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTGCACACCCACAAAATaGCCCTTCTCCTTTGGTGCC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDCTPTK*PFSFGA
Trigger: GGCACCAAAGGAGAAGGGGCATTTTGTGGGTGTGCA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGTCTGTCTGCAGCATaGACGACGTTGGGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGLSAA*TTLGEG
Trigger: CCCCTCACCCAACGTCGTGCATGCTGCAGACAGACC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCAACAAAGTGCACCTGTaGGGCATTCTGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGNKVHL*GILFML
Trigger: GAGCATGAACAGAATGCCGCACAGGTGCACTTTGTT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGACAGGGCGCAAGGGCTaGCTGAAATCTAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMTGRKG*LKSSLP
Trigger: AGGAAGACTAGATTTCAGCCAGCCCTTGCGCCCTGT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATACTGGCAATGAGGCCTaGGCAAAAGTTGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYTGNEA*AKVEGT
Trigger: TGTGCCTTCAACTTTTGCCCAGGCCTCATTGCCAGT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCCCATTCAGAGTGGCTaGTTCAGCCTCATCAAATTG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGPIQSG*FSLIKL
Trigger: CAATTTGATGAGGCTGAACCAGCCACTCTGAATGGG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCCAGCCCATTCAGAGTaGCTGGTTCAGCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSPAHSE*LVQPHQ
Trigger: TTGATGAGGCTGAACCAGCCACTCTGAATGGGCTGG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCCAGCCCATTCAGAGTaGCTGGTTCAGCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNPAHSE*LVQPHQ
Trigger: TTGATGAGGCTGAACCAGCCACTCTGAATGGGCTGG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCCAGCCCATTCAGAGTaGCTGGTTCAGCCTCATCAA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMPAHSE*LVQPHQ
Trigger: TTGATGAGGCTGAACCAGCCACTCTGAATGGGCTGG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGGCAGCTGAGGGATTaGGATAGTGGTCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMWQLRD*DSGLFW
Trigger: CCAGAACAGACCACTATCCCAATCCCTCAGCTGCCA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTGGCAGCTGAGGGATTaGGATAGTGGTCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNWQLRD*DSGLFW
Trigger: CCAGAACAGACCACTATCCCAATCCCTCAGCTGCCA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTGGCAGCTGAGGGATTaGGATAGTGGTCTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSWQLRD*DSGLFW
Trigger: CCAGAACAGACCACTATCCCAATCCCTCAGCTGCCA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAGACTGGGTTTCCTGTaGCAGCTGAGGGATTGGGAT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDRLGFL*QLRDWD
Trigger: ATCCCAATCCCTCAGCTGCCACAGGAAACCCAGTCT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGAGTGGAGCTTCATGTaGCTCTCCAAGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMEWSFM*LSKDVL
Trigger: CAGCACATCCTTGGAGAGCCACATGAAGCTCCACTC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGAGTGGAGCTTCATGTaGCTCTCCAAGGATGTGCTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDEWSFM*LSKDVL
Trigger: CAGCACATCCTTGGAGAGCCACATGAAGCTCCACTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGTCTTCTGGTCTGAGTaGAGCTTCATGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSVFWSE*SFMWLS
Trigger: GGAGAGCCACATGAAGCTCCACTCAGACCAGAAGAC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGTCTTCTGGTCTGAGTaGAGCTTCATGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDVFWSE*SFMWLS
Trigger: GGAGAGCCACATGAAGCTCCACTCAGACCAGAAGAC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCCGTTTCTTACAAGTTaGGCAGGTGAAGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGPFLTS*AGEVAI
Trigger: GATGGCTACTTCACCTGCCCAACTTGTAAGAAACGG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCACCTGGATAAAATCTaGGAACCGTTTCTTACAAGT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSHLDKI*EPFLTS
Trigger: ACTTGTAAGAAACGGTTCCCAGATTTTATCCAGGTG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTGCGGTCGGCTTTCTTaGCCTCCCTCTCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNCGRLS*PPSQDY
Trigger: ATAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTGCGGTCGGCTTTCTTaGCCTCCCTCTCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSCGRLS*PPSQDY
Trigger: ATAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAGCTCTGCTCCTGGGTaGTTCTTCAGAATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSSAPG*FFRMWA
Trigger: AGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTGGGAGCTCTGCTCCTaGGTGGTTCTTCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDWELCS*VVLQNV
Trigger: CACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGGGAGCTCTGCTCCTaGGTGGTTCTTCAGAATGTG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMWELCS*VVLQNV
Trigger: CACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACTTCCGAATGCTCGGTaGGAGCTCTGCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPLPNAR*ELCSWV
Trigger: CACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTGTGCTGGACCATCTTaGTCTTGCTGCTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYCAGPS*SCCCTA
Trigger: AGCAGTACAGCAGCAAGACCAAGATGGTCCAGCACA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTATGGTGTTGGAGAGCTaGGCGAACTCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSMVLES*ANSGCF
Trigger: GAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCAT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATATGGTGTTGGAGAGCTaGGCGAACTCTGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNMVLES*ANSGCF
Trigger: GAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCAT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGTGTGTGTATGGTGTTaGAGAGCTGGGCGAACTCTG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNVCVWC*RAGRTL
Trigger: CAGAGTTCGCCCAGCTCTCCAACACCATACACACAC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGTGTGTGTATGGTGTTaGAGAGCTGGGCGAACTCTG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSVCVWC*RAGRTL
Trigger: CAGAGTTCGCCCAGCTCTCCAACACCATACACACAC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCAGTGGTGTGTGTATaGTGTTGGAGAGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSVVCV*CWRAGR
Trigger: TCGCCCAGCTCTCCAACACCATACACACACCACTGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTGTAGTCAAAACCGCTaGGGTGGCACTGATCACAGC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSCSQNR*GGTDHS
Trigger: GCTGTGATCAGTGCCACCCCAGCGGTTTTGACTACA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTGTAGTCAAAACCGCTaGGGTGGCACTGATCACAGC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDCSQNR*GGTDHS
Trigger: GCTGTGATCAGTGCCACCCCAGCGGTTTTGACTACA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAGTTCTGTCATTGCTTaGGTGAGCAGGTCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSSVIA*VSRSVV
Trigger: GACGACGGACCTGCTCACCCAAGCAATGACAGAACT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAGTTCTGTCATTGCTTaGGTGAGCAGGTCCGTCGTC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSSVIA*VSRSVV
Trigger: GACGACGGACCTGCTCACCCAAGCAATGACAGAACT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCTGGTAATCCCCTTGTaGCGTTCGGTAGTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDLVIPL*RSVVCR
Trigger: ACGACAGACTACCGAACGCCACAAGGGGATTACCAG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCTGGTAATCCCCTTGTaGCGTTCGGTAGTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMLVIPL*RSVVCR
Trigger: ACGACAGACTACCGAACGCCACAAGGGGATTACCAG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCTGGTAATCCCCTTGTaGCGTTCGGTAGTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSLVIPL*RSVVCR
Trigger: ACGACAGACTACCGAACGCCACAAGGGGATTACCAG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAGGAATTCCAAGCACTaGGCAGGTACGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSRNSKH*AGTCAA
Trigger: TGCAGCACACGTACCTGCCCAGTGCTTGGAATTCCT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATAGGAATTCCAAGCACTaGGCAGGTACGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNRNSKH*AGTCAA
Trigger: TGCAGCACACGTACCTGCCCAGTGCTTGGAATTCCT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCCAGGGTGGAAGTCATaGTTTGGTGATATGCACTTC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGPGWKS*FGDMHF
Trigger: GAAGTGCATATCACCAAACCATGACTTCCACCCTGG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAATTCAAGCTCCAGGGTaGAAGTCATGGTTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTIQAPG*KSWFGD
Trigger: ATCACCAAACCATGACTTCCACCCTGGAGCTTGAAT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATAAACCCCAGTGTATaGATGAGAGACAAAACTGTG +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSINPSV*MRDKTV
Trigger: CACAGTTTTGTCTCTCATCCATACACTGGGGTTTAT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATCTCCTTTGGTGCCATaGCTTGGAATAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSPLVP*LGIRSP
Trigger: TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGAAAGCCATGCGATTTaGCTCGACTGCCATCCGCAT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSESHAI*LDCHPH
Trigger: ATGCGGATGGCAGTCGAGCCAAATCGCATGGCTTTC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGAAAGCCATGCGATTTaGCTCGACTGCCATCCGCAT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDESHAI*LDCHPH
Trigger: ATGCGGATGGCAGTCGAGCCAAATCGCATGGCTTTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACCACAATATCCACACTaGCTACATACATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPPQYPH*LHTCFP
Trigger: TGGAAAACATGTATGTAGCCAGTGTGGATATTGTGG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACCAATCGGATGCGCTTaGCTCTGCGCATGTCGTCGG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPPIGCA*LCACRR
Trigger: CCGACGACATGCGCAGAGCCAAGCGCATCCGATTGG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
3UTR CAA 72 bp CCATGGCTTGGAATAAGAAGTCCAGTAACCATGAACTaGGCACATCCTGTCTCCACCTTTGGTATGAACACA +
Preference number: 4 (lower is better)
Translates to: PWLGIRSPVTMN*AHPVSTFGMNT
Trigger: TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATTCCAAGCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTATCAAGAGAAACCTTaGGGTGAATGTAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSYQEKP*GECNSL
Trigger: AAGACTGTTACATTCACCTCAAGGTTTCTCTTGATA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGTAAGTCTTCTGGTCTaGGTGGAGCTTCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMVSLLV*VELHVA
Trigger: AGCCACATGAAGCTCCACTCAGACCAGAAGACTTAC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGTAAGTCTTCTGGTCTaGGTGGAGCTTCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDVSLLV*VELHVA
Trigger: AGCCACATGAAGCTCCACTCAGACCAGAAGACTTAC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTGTCTCTTCGATAAGTaGTTTACCAGCATGCCGCGC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDCLFDK*FTSMPR
Trigger: GCGCGGCATGCTGGTAAATCACTTATCGAAGAGACA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCTGTAATCACAAACTaGCCCGGAGGAAGCGTCATC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSVITN*PGGSVI
Trigger: GATGACGCTTCCTCCGGGTCAGTTTGTGATTACAGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCTGTAATCACAAACTaGCCCGGAGGAAGCGTCATC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSVITN*PGGSVI
Trigger: GATGACGCTTCCTCCGGGTCAGTTTGTGATTACAGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCTGTAATCACAAACTaGCCCGGAGGAAGCGTCATC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSVITN*PGGSVI
Trigger: GATGACGCTTCCTCCGGGTCAGTTTGTGATTACAGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCACCCCAGTGTATGGATaGGAGACAAAACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGTPVYG*ETKLWF
Trigger: AAACCACAGTTTTGTCTCTCATCCATACACTGGGGT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACAAAAACCGAGGGTTTaGAGAGTCAATTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPQKPRV*RVNLIK
Trigger: CTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCCCTTATAACTACCTaGATTATTAGAAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSLITT*IIRSGH
Trigger: ATGGCCACTTCTAATAATTCAGGTAGTTATAAGGGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTCCCTTATAACTACCTaGATTATTAGAAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSLITT*IIRSGH
Trigger: ATGGCCACTTCTAATAATTCAGGTAGTTATAAGGGA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGCAGAATACCTGATCTaGAAGCCATGCGATTTGGCT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYAEYLI*KPCDLA
Trigger: AGCCAAATCGCATGGCTTTCAGATCAGGTATTCTGC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAATGTGCAGAATACCTaGTCTGAAAGCCATGCGATT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTNVQNT*SESHAI
Trigger: AATCGCATGGCTTTCAGATCAGGTATTCTGCACATT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCAGTGTCAATGTGTCTTaGGAGAGGCCACAATATCCA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSVNVS*ERPQYP
Trigger: TGGATATTGTGGCCTCTCTCAAGACACATTGACACT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAATACTCACACTGGACTaGATGAAGTCTACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTILTLD*MKSTVS
Trigger: TGACACTGTAGACTTCATTCAGTCCAGTGTGAGTAT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGACACACTGAAGCATaGGCGTTATTGCACTCCTCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGHTEA*ALLHSS
Trigger: TGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCCATGGAAGCGTAAGTaGTGGTCCAGTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYPWKRK*WSSLSF
Trigger: AAAGGACAAACTGGACCAGCACTTACGCTTCCATGG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCTTTGCGGTCCGAATaGCGGAGCATGTGGAGTCGC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSLRSE*RSMWSR
Trigger: GCGACTCCACATGCTCCGGCATTCGGACCGCAAAGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGATTATGCATCCTCTaGATGTGTTCCCGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGLCIL*MCSRSL
Trigger: CAAACTACGGGAACACATGCAGAGGATGCATAATCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCCCTCTCAGGATTATaGATCCTCTGCATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSLSGL*ILCMCS
Trigger: GGAACACATGCAGAGGATGCATAATCCTGAGAGGGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCAGCTGGGTGTGTGTaGTCAGCATGGGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSAGCV*SAWGLA
Trigger: AGCCAGACCCCATGCTGAGCACACACACCCAGCTGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCCATCTTGGTCTTGCTaGTGTACTGCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSPSWSC*CTAWSS
Trigger: ACTGCTCCAAGCAGTACAGCAGCAAGACCAAGATGG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCATCTTGGTCTTGCTaGTGTACTGCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPSWSC*CTAWSS
Trigger: ACTGCTCCAAGCAGTACAGCAGCAAGACCAAGATGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAGTAGTAACTGGAGTTaGCACACCACTGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSSNWS*HTTVCN
Trigger: ATTACAGACAGTGGTGTGGCAACTCCAGTTACTACT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGATGTACTGTGTGGTCTaGTGTTGGCTGTTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMMYCVV*CWLLVW
Trigger: CCAGACCAACAGCCAACAGCAGACCACACAGTACAT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCATGGTTTGGTGATATaGACTTCGCTGCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYHGLVI*TSLLPF
Trigger: GAACGGAAGCAGCGAAGTGCATATCACCAAACCATG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGTAAACAGAGTCTGTaGAGCTTCCACCGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMCKQSL*SFHRVD
Trigger: ATCCACCCGGTGGAAGCTGCACAGACTCTGTTTACA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCAGATGCTGAAGAGCTaGATTCTGCAGCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMQMLKS*ILQLQS
Trigger: CGATTGGAGCTGCAGAATGCAGCTCTTCAGCATCTG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTACTGGCAATGAGGCCTaGGCAAAAGTTGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSTGNEA*AKVEGT
Trigger: TGTGCCTTCAACTTTTGCCCAGGCCTCATTGCCAGT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGATAGTGGTCTGTTCTaGTTGATCCAGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYDSGLF*LIQPIQ
Trigger: CTGAATGGGCTGGATCAACCAGAACAGACCACTATC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCAGCGTGCTCTGGGTaGGCACCACGCTCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSACSG*APRSLH
Trigger: ATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTGGAAGCGTAAGTGCTaGTCCAGTTTGTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYWKRKC*SSLSFS
Trigger: GGAAAAGGACAAACTGGACCAGCACTTACGCTTCCA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCCGTTTCTTACAAGTTaGGCAGGTGAAGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYPFLTS*AGEVAI
Trigger: GATGGCTACTTCACCTGCCCAACTTGTAAGAAACGG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTGGTTCTTCAGAATGTaGGCTTTGCGCTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNWFFRM*ALRLLA
Trigger: TGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGGTTCTTCAGAATGTaGGCTTTGCGCTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMWFFRM*ALRLLA
Trigger: TGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTGTGCTGGACCATCTTaGTCTTGCTGCTGTACTGCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMCAGPS*SCCCTA
Trigger: AGCAGTACAGCAGCAAGACCAAGATGGTCCAGCACA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTTCTTTCGAATGTGCTaGACCATCTTGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGFFRMC*TILVLL
Trigger: CAGCAAGACCAAGATGGTCCAGCACATTCGAAAGAA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGAGCTGGGCGAACTCTaGATGCTTCTTTCGAATGTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDELGEL*MLLSNV
Trigger: CACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGAGCTGGGCGAACTCTaGATGCTTCTTTCGAATGTG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMELGEL*MLLSNV
Trigger: CACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGAGCTGGGCGAACTCTaGATGCTTCTTTCGAATGTG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNELGEL*MLLSNV
Trigger: CACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTCTGTCGTTAAGGTCTaGGACAGTTCTGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSVVKV*DSSVIA
Trigger: AGCAATGACAGAACTGTCCCAGACCTTAACGACAGA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGAGCCTGCCCCTGTGTaGAAGAACTGCCCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPEPAPV*KNCPGC
Trigger: ACATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGTAACCGCCTTCACCTaGCCAGTAGTAACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMVTAFT*PVVTGV
Trigger: AACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTAC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGTAACCGCCTTCACCTaGCCAGTAGTAACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSVTAFT*PVVTGV
Trigger: AACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTAC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATGTTGGCTGTTGGTCTaGGGGTCCAGGGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPCWLLV*GSRESL
Trigger: CAGTGACTCCCTGGACCCCCAGACCAACAGCCAACA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCTGCTGTTGGCTGTTaGTCTGGGGGTCCAGGGAGT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSAVGC*SGGPGS
Trigger: ACTCCCTGGACCCCCAGACCAACAGCCAACAGCAGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCCAGGGTGGAAGTCATaGTTTGGTGATATGCACTTC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYPGWKS*FGDMHF
Trigger: GAAGTGCATATCACCAAACCATGACTTCCACCCTGG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGTAATCATTACACTGTaGGACTTAGGGAACCCGAAC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGVIITL*DLGNPN
Trigger: GTTCGGGTTCCCTAAGTCCCACAGTGTAATGATTAC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTCTCATCATGAGAATTaGGATGCTGTTGCAACTGCT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSHHEN*DAVATA
Trigger: AGCAGTTGCAACAGCATCTCAATTCTCATGATGAGA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGTTTCCTGTGGCAGCTaGGGGATTGGGATAGTGGTC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPVSCGS*GIGIVV
Trigger: GACCACTATCCCAATCCCTCAGCTGCCACAGGAAAC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCACGATTGGGTTTTATaGTGGGTAGAGTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGHDWVL*WVELTL
Trigger: CAGAGTTAACTCTACCCATCATAAAACCCAATCGTG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACATTTGAATCTCAGATaGATAGCCACGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTHLNLR*IATEGI
Trigger: AATTCCTTCCGTGGCTATTCATCTGAGATTCAAATG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGAAGTCATGGTTTGGTaGTATGCACTTCGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSEVMVW*YALRCF
Trigger: GAAGCAGCGAAGTGCATATCACCAAACCATGACTTC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGGGTTTAGATTCTGCTaGCATCAAGCAGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYGFRFC*HQAAFS
Trigger: AGAAAAGGCTGCTTGATGTCAGCAGAATCTAAACCC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTCACACTGGACTGAATaGAGTCTACAGTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSHWTE*SLQCQC
Trigger: ACATTGACACTGTAGACTTCATTCAGTCCAGTGTGA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCATACTCACACTGGACTaGATGAAGTCTACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGILTLD*MKSTVS
Trigger: TGACACTGTAGACTTCATTCAGTCCAGTGTGAGTAT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCGAATAAACAGATGCTaGAGAGCTGCATTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNRINRC*RAAFCS
Trigger: GCTGCAGAATGCAGCTCTTCAGCATCTGTTTATTCG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAAGCATGCGCGTTATTaGACTCCTCACACCACAAGT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSKHARY*TPHTTS
Trigger: ACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGAGCTGCATTTCGGATaGGCTTGGCTCTGCGCATGT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPELHFG*AWLCAC
Trigger: ACATGCGCAGAGCCAAGCGCATCCGAAATGCAGCTC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCATGGAAGCGTAAGTaGTGGTCCAGTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPWKRK*WSSLSF
Trigger: AAAGGACAAACTGGACCAGCACTTACGCTTCCATGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCCATGGAAGCGTAAGTaGTGGTCCAGTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSPWKRK*WSSLSF
Trigger: AAAGGACAAACTGGACCAGCACTTACGCTTCCATGG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCCATGGAAGCGTAAGTaGTGGTCCAGTTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNPWKRK*WSSLSF
Trigger: AAAGGACAAACTGGACCAGCACTTACGCTTCCATGG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGCAGGTACGTGTGCTaGACAGAGGAATTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGRYVC*TEEFCC
Trigger: GCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACTGGGCAGGTACGTGTaGTGCACAGAGGAATTCTGC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPLGRYV*CTEEFC
Trigger: GCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGAGAGGGCAGAAGTTTaGTTTTCTTCCAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTERAEV*FSSNSD
Trigger: ATCAGAATTGGAAGAAAAGCAAACTTCTGCCCTCTC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCATGGTTTGGTGATATaGACTTCGCTGCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNHGLVI*TSLLPF
Trigger: GAACGGAAGCAGCGAAGTGCATATCACCAAACCATG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCATGGTTTGGTGATATaGACTTCGCTGCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDHGLVI*TSLLPF
Trigger: GAACGGAAGCAGCGAAGTGCATATCACCAAACCATG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGATAAATGGATCCTaGAAGGCAGAACAAAATTTC +
Preference number: 4 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSMINGS*KAEQNF
Trigger: GAAATTTTGTTCTGCCTTGCAGGATCCATTTATCAT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCCCGAACCTGTGTTTTaGAATGCAGGGTCAATATTT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGPEPVF*NAGSIF
Trigger: AAATATTGACCCTGCATTGCAAAACACAGGTTCGGG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGATGTCGGCCACACATaGGAGCTTTCATCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDDVGHT*ELSSLE
Trigger: TTCCAAAGATGAAAGCTCGCATGTGTGGCCGACATC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGATGTCGGCCACACATaGGAGCTTTCATCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNDVGHT*ELSSLE
Trigger: TTCCAAAGATGAAAGCTCGCATGTGTGGCCGACATC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAACAAAGTGCACCTGTaGGGCATTCTGTTCATGCTC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDNKVHL*GILFML
Trigger: GAGCATGAACAGAATGCCGCACAGGTGCACTTTGTT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATACTCCTTCCAGGCCCTaGAAAAATGACTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYTPSRP*KNDFHL
Trigger: TAGATGGAAGTCATTTTTCCAGGGCCTGGAAGGAGT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCATCTACACTCTCGATaGAAGGCAGCACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMHLHSR*KAAPGY
Trigger: ATAACCAGGTGCTGCCTTCCATCGAGAGTGTAGATG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCATCTACACTCTCGATaGAAGGCAGCACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSHLHSR*KAAPGY
Trigger: ATAACCAGGTGCTGCCTTCCATCGAGAGTGTAGATG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCCATTCAGAGTGGCTaGTTCAGCCTCATCAAATTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPIQSG*FSLIKL
Trigger: CAATTTGATGAGGCTGAACCAGCCACTCTGAATGGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGATAGTGGTCTGTTCTaGTTGATCCAGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSDSGLF*LIQPIQ
Trigger: CTGAATGGGCTGGATCAACCAGAACAGACCACTATC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGATAGTGGTCTGTTCTaGTTGATCCAGCCCATTCAG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNDSGLF*LIQPIQ
Trigger: CTGAATGGGCTGGATCAACCAGAACAGACCACTATC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCAGGGTGTGAGTTTCTaGTTCATGTTCCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDQGVSF*FMFQGR
Trigger: TCTTCCCTGGAACATGAACCAGAAACTCACACCCTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCAGGGTGTGAGTTTCTaGTTCATGTTCCAGGGAAGA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMQGVSF*FMFQGR
Trigger: TCTTCCCTGGAACATGAACCAGAAACTCACACCCTG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCCGTTTCTTACAAGTTaGGCAGGTGAAGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSPFLTS*AGEVAI
Trigger: GATGGCTACTTCACCTGCCCAACTTGTAAGAAACGG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCGTTTCTTACAAGTTaGGCAGGTGAAGTAGCCATC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPFLTS*AGEVAI
Trigger: GATGGCTACTTCACCTGCCCAACTTGTAAGAAACGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGAATGCCGGAGCATGTaGAGTCGCAGTTTATCGGGG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPECRSM*SRSLSG
Trigger: CCCCGATAAACTGCGACTCCACATGCTCCGGCATTC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTTCTTTCGAATGTGCTaGACCATCTTGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYFFRMC*TILVLL
Trigger: CAGCAAGACCAAGATGGTCCAGCACATTCGAAAGAA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCAGGGTGGAAGTCATaGTTTGGTGATATGCACTTC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPGWKS*FGDMHF
Trigger: GAAGTGCATATCACCAAACCATGACTTCCACCCTGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCCAGGGTGGAAGTCATaGTTTGGTGATATGCACTTC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMPGWKS*FGDMHF
Trigger: GAAGTGCATATCACCAAACCATGACTTCCACCCTGG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATATTCAAGCTCCAGGGTaGAAGTCATGGTTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYIQAPG*KSWFGD
Trigger: ATCACCAAACCATGACTTCCACCCTGGAGCTTGAAT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGCGAGCTTTCATCTTTaGAATCCATCTTCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYASFHL*NPSSPN
Trigger: GTTGGGAGAAGATGGATTCCAAAGATGAAAGCTCGC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGCCAACATCCACAGTaGACTGCTGTGACTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGQHPQ*TAVTGE
Trigger: CTCACCAGTCACAGCAGTCCACTGTGGATGTTGGCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGTGCTTCGGACACACTaGAGCATGCGCGTTATTGCA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPVLRTH*SMRVIA
Trigger: TGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCAC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACATATCAAGAGAAACCTTaGGGTGAATGTAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTYQEKP*GECNSL
Trigger: AAGACTGTTACATTCACCTCAAGGTTTCTCTTGATA...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTCCTCAGAAATGTCATaGATTTTCTGGTTCACGAAC +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSSEMS*IFWFTN
Trigger: GTTCGTGAACCAGAAAATTCATGACATTTCTGAGGA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACTGGTAGATCTTTTCTaGGTGGAAGCTGCGCACGTG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPLVDLF*VEAAHV
Trigger: CACGTGCGCAGCTTCCACTCAGAAAAGATCTACCAG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATACCCCAGTGTATGGATaGGAGACAAAACTGTGGTTT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNTPVYG*ETKLWF
Trigger: AAACCACAGTTTTGTCTCTCATCCATACACTGGGGT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGGTTTAGATTCTGCTaGCATCAAGCAGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGFRFC*HQAAFS
Trigger: AGAAAAGGCTGCTTGATGTCAGCAGAATCTAAACCC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGGTTTAGATTCTGCTaGCATCAAGCAGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGFRFC*HQAAFS
Trigger: AGAAAAGGCTGCTTGATGTCAGCAGAATCTAAACCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATAGTGTCAATGTGTCTTaGGAGAGGCCACAATATCCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSVNVS*ERPQYP
Trigger: TGGATATTGTGGCCTCTCTCAAGACACATTGACACT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAGTGTCAATGTGTCTTaGGAGAGGCCACAATATCCA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSVNVS*ERPQYP
Trigger: TGGATATTGTGGCCTCTCTCAAGACACATTGACACT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAGTGTCAATGTGTCTTaGGAGAGGCCACAATATCCA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSVNVS*ERPQYP
Trigger: TGGATATTGTGGCCTCTCTCAAGACACATTGACACT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGGCCAATTCTTCTCTTaGTCTCGAAGAACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYGQFFS*SRRTFL
Trigger: AAGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAGATGCTGTTGCAACTaGTCCGAGCTTATAAATCGG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMRCCCN*SELINR
Trigger: CCGATTTATAAGCTCGGAGCAGTTGCAACAGCATCT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAGATGCTGTTGCAACTaGTCCGAGCTTATAAATCGG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDRCCCN*SELINR
Trigger: CCGATTTATAAGCTCGGAGCAGTTGCAACAGCATCT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCAGAATGTGGGCTTTaGGCTTGCTGGCACTTTTAT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSECGL*ACWHFY
Trigger: ATAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCAGAATGTGGGCTTTaGGCTTGCTGGCACTTTTAT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSECGL*ACWHFY
Trigger: ATAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTGCTTCTTTCGAATGTaGTGGACCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSCFFRM*WTILVL
Trigger: CAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTGCTTCTTTCGAATGTaGTGGACCATCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNCFFRM*WTILVL
Trigger: CAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGACAGTTCTGTCATTaGTTGGGTGAGCAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGQFCH*LGEQVR
Trigger: ACGGACCTGCTCACCCAAGCAATGACAGAACTGTCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACACTCCTTCCAGGCCCTaGAAAAATGACTTCCATCTA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDTPSRP*KNDFHL
Trigger: TAGATGGAAGTCATTTTTCCAGGGCCTGGAAGGAGT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCAAATTGCTCCTTTGTaGGAAAATGTAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGQIAPL*ENVASP
Trigger: AGGACTTGCTACATTTTCCCACAAAGGAGCAATTTG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAAGACTGGGTTTCCTGTaGCAGCTGAGGGATTGGGAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPRLGFL*QLRDWD
Trigger: ATCCCAATCCCTCAGCTGCCACAGGAAACCCAGTCT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGTCTTCTGGTCTGAGTaGAGCTTCATGTGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPVFWSE*SFMWLS
Trigger: GGAGAGCCACATGAAGCTCCACTCAGACCAGAAGAC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCACCTGGATAAAATCTaGGAACCGTTTCTTACAAGT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGHLDKI*EPFLTS
Trigger: ACTTGTAAGAAACGGTTCCCAGATTTTATCCAGGTG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATGCGGTCGGCTTTCTTaGCCTCCCTCTCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPCGRLS*PPSQDY
Trigger: ATAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAAGCTCTGCTCCTGGGTaGTTCTTCAGAATGTGGGCT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSSAPG*FFRMWA
Trigger: AGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGTGTGTGTATGGTGTTaGAGAGCTGGGCGAACTCTG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPVCVWC*RAGRTL
Trigger: CAGAGTTCGCCCAGCTCTCCAACACCATACACACAC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCAGTGGTGTGTGTATaGTGTTGGAGAGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSVVCV*CWRAGR
Trigger: TCGCCCAGCTCTCCAACACCATACACACACCACTGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCTGTCGTTAAGGTCTaGGACAGTTCTGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSVVKV*DSSVIA
Trigger: AGCAATGACAGAACTGTCCCAGACCTTAACGACAGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCTGTCGTTAAGGTCTaGGACAGTTCTGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSVVKV*DSSVIA
Trigger: AGCAATGACAGAACTGTCCCAGACCTTAACGACAGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACTGGCCAGTAGTAACTaGAGTTGCCACACCACTGTC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPLASSN*SCHTTV
Trigger: GACAGTGGTGTGGCAACTCCAGTTACTACTGGCCAG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATATTCAAGCTCCAGGGTaGAAGTCATGGTTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNIQAPG*KSWFGD
Trigger: ATCACCAAACCATGACTTCCACCCTGGAGCTTGAAT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCCTGTCTCCACCTTTaGTATGAACACAATATGCCA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSCLHL*YEHNMP
Trigger: TGGCATATTGTGTTCATACCAAAGGTGGAGACAGGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCTCCTTTGGTGCCATaGCTTGGAATAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSPLVP*LGIRSP
Trigger: TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCTCCTTTGGTGCCATaGCTTGGAATAAGAAGTCCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSPLVP*LGIRSP
Trigger: TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGTAATCATTACACTGTaGGACTTAGGGAACCCGAAC +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNVIITL*DLGNPN
Trigger: GTTCGGGTTCCCTAAGTCCCACAGTGTAATGATTAC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGAAAGCCATGCGATTTaGCTCGACTGCCATCCGCAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPESHAI*LDCHPH
Trigger: ATGCGGATGGCAGTCGAGCCAAATCGCATGGCTTTC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGCGAGCTTTCATCTTTaGAATCCATCTTCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDASFHL*NPSSPN
Trigger: GTTGGGAGAAGATGGATTCCAAAGATGAAAGCTCGC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTATCAAGAGAAACCTTaGGGTGAATGTAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGYQEKP*GECNSL
Trigger: AAGACTGTTACATTCACCTCAAGGTTTCTCTTGATA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCTCATCATGAGAATTaGGATGCTGTTGCAACTGCT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSHHEN*DAVATA
Trigger: AGCAGTTGCAACAGCATCTCAATTCTCATGATGAGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCTCATCATGAGAATTaGGATGCTGTTGCAACTGCT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSHHEN*DAVATA
Trigger: AGCAGTTGCAACAGCATCTCAATTCTCATGATGAGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGTAAGTCTTCTGGTCTaGGTGGAGCTTCATGTGGCT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPVSLLV*VELHVA
Trigger: AGCCACATGAAGCTCCACTCAGACCAGAAGACTTAC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCACGATTGGGTTTTATaGTGGGTAGAGTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSHDWVL*WVELTL
Trigger: CAGAGTTAACTCTACCCATCATAAAACCCAATCGTG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCACGATTGGGTTTTATaGTGGGTAGAGTTAACTCTG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDHDWVL*WVELTL
Trigger: CAGAGTTAACTCTACCCATCATAAAACCCAATCGTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCTGTAATCACAAACTaGCCCGGAGGAAGCGTCATC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSVITN*PGGSVI
Trigger: GATGACGCTTCCTCCGGGTCAGTTTGTGATTACAGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGTTGTCCACCTTTGTaGAATAATGAAGAACTATCA +
Preference number: 4 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGCPPL*NNEELS
Trigger: TGATAGTTCTTCATTATTTCACAAAGGTGGACAACC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATAATGTGCAGAATACCTaGTCTGAAAGCCATGCGATT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNNVQNT*SESHAI
Trigger: AATCGCATGGCTTTCAGATCAGGTATTCTGCACATT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCACACTGGACTGAATaGAGTCTACAGTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSHWTE*SLQCQC
Trigger: ACATTGACACTGTAGACTTCATTCAGTCCAGTGTGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACATACTCACACTGGACTaGATGAAGTCTACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDILTLD*MKSTVS
Trigger: TGACACTGTAGACTTCATTCAGTCCAGTGTGAGTAT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGCCAATTCTTCTCTTaGTCTCGAAGAACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGQFFS*SRRTFL
Trigger: AAGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGAATTGAGATGCTGTTaGAACTGCTCCGAGCTTATA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSELRCC*NCSELI
Trigger: TATAAGCTCGGAGCAGTTGCAACAGCATCTCAATTC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGAATTGAGATGCTGTTaGAACTGCTCCGAGCTTATA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDELRCC*NCSELI
Trigger: TATAAGCTCGGAGCAGTTGCAACAGCATCTCAATTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCAGCCTCATCAAATTaGTCCTTTGTGGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSASSN*SFVGKC
Trigger: ACATTTTCCCACAAAGGAGCAATTTGATGAGGCTGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACCATCTTGGTCTTGCTaGTGTACTGCTTGGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPPSWSC*CTAWSS
Trigger: ACTGCTCCAAGCAGTACAGCAGCAAGACCAAGATGG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAGTAGTAACTGGAGTTaGCACACCACTGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSSNWS*HTTVCN
Trigger: ATTACAGACAGTGGTGTGGCAACTCCAGTTACTACT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATAGTAGTAACTGGAGTTaGCACACCACTGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSSNWS*HTTVCN
Trigger: ATTACAGACAGTGGTGTGGCAACTCCAGTTACTACT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCCCGAACCTGTGTTTTaGAATGCAGGGTCAATATTT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSPEPVF*NAGSIF
Trigger: AAATATTGACCCTGCATTGCAAAACACAGGTTCGGG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACAGGTGATTCTGGGCTaGCCGTACAAACATCATCCA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPQVILG*PYKHHP
Trigger: TGGATGATGTTTGTACGGCCAGCCCAGAATCACCTG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGGCTTTGCGCTTGCTaGCACTTTTATAAACCTTAT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGLCAC*HFYKPY
Trigger: ATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGGCTTTGCGCTTGCTaGCACTTTTATAAACCTTAT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGLCAC*HFYKPY
Trigger: ATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATGGTTCTTCAGAATGTaGGCTTTGCGCTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPWFFRM*ALRLLA
Trigger: TGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGTAACCGCCTTCACCTaGCCAGTAGTAACTGGAGTT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPVTAFT*PVVTGV
Trigger: AACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTAC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCCTGTCTCCACCTTTaGTATGAACACAATATGCCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSCLHL*YEHNMP
Trigger: TGGCATATTGTGTTCATACCAAAGGTGGAGACAGGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCCTGTCTCCACCTTTaGTATGAACACAATATGCCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSCLHL*YEHNMP
Trigger: TGGCATATTGTGTTCATACCAAAGGTGGAGACAGGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCCACAATATCCACACTaGCTACATACATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYPQYPH*LHTCFP
Trigger: TGGAAAACATGTATGTAGCCAGTGTGGATATTGTGG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCCTCAGAAATGTCATaGATTTTCTGGTTCACGAAC +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSSEMS*IFWFTN
Trigger: GTTCGTGAACCAGAAAATTCATGACATTTCTGAGGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCATTTGAATCTCAGATaGATAGCCACGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDHLNLR*IATEGI
Trigger: AATTCCTTCCGTGGCTATTCATCTGAGATTCAAATG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCATTTGAATCTCAGATaGATAGCCACGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMHLNLR*IATEGI
Trigger: AATTCCTTCCGTGGCTATTCATCTGAGATTCAAATG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCTATGACCTTGGAATaGATGTGCAGAATACCTGAT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSMTLE*MCRIPD
Trigger: ATCAGGTATTCTGCACATTCATTCCAAGGTCATAGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCTATGACCTTGGAATaGATGTGCAGAATACCTGAT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSMTLE*MCRIPD
Trigger: ATCAGGTATTCTGCACATTCATTCCAAGGTCATAGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCTATGACCTTGGAATaGATGTGCAGAATACCTGAT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSMTLE*MCRIPD
Trigger: ATCAGGTATTCTGCACATTCATTCCAAGGTCATAGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCAGCCTCATCAAATTaGTCCTTTGTGGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSASSN*SFVGKC
Trigger: ACATTTTCCCACAAAGGAGCAATTTGATGAGGCTGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCAGCCTCATCAAATTaGTCCTTTGTGGGAAAATGT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSASSN*SFVGKC
Trigger: ACATTTTCCCACAAAGGAGCAATTTGATGAGGCTGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCCCTCTCAGGATTATaGATCCTCTGCATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSLSGL*ILCMCS
Trigger: GGAACACATGCAGAGGATGCATAATCCTGAGAGGGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGAGAGGGCAGAAGTTTaGTTTTCTTCCAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSERAEV*FSSNSD
Trigger: ATCAGAATTGGAAGAAAAGCAAACTTCTGCCCTCTC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGAGAGGGCAGAAGTTTaGTTTTCTTCCAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMERAEV*FSSNSD
Trigger: ATCAGAATTGGAAGAAAAGCAAACTTCTGCCCTCTC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGAGAGGGCAGAAGTTTaGTTTTCTTCCAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDERAEV*FSSNSD
Trigger: ATCAGAATTGGAAGAAAAGCAAACTTCTGCCCTCTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACATGGTTTGGTGATATaGACTTCGCTGCTTCCGTTC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPHGLVI*TSLLPF
Trigger: GAACGGAAGCAGCGAAGTGCATATCACCAAACCATG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAATTCTGTTCATGCTCTaGAGATGTCGGCCACACATG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPILFML*RCRPHM
Trigger: CATGTGTGGCCGACATCTGCAGAGCATGAACAGAAT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACATCTACACTCTCGATaGAAGGCAGCACCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPHLHSR*KAAPGY
Trigger: ATAACCAGGTGCTGCCTTCCATCGAGAGTGTAGATG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCAAATTGCTCCTTTGTaGGAAAATGTAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMQIAPL*ENVASP
Trigger: AGGACTTGCTACATTTTCCCACAAAGGAGCAATTTG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCAAATTGCTCCTTTGTaGGAAAATGTAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNQIAPL*ENVASP
Trigger: AGGACTTGCTACATTTTCCCACAAAGGAGCAATTTG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCAAATTGCTCCTTTGTaGGAAAATGTAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSQIAPL*ENVASP
Trigger: AGGACTTGCTACATTTTCCCACAAAGGAGCAATTTG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACCCATTCAGAGTGGCTaGTTCAGCCTCATCAAATTG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPPIQSG*FSLIKL
Trigger: CAATTTGATGAGGCTGAACCAGCCACTCTGAATGGG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATGGAAGCGTAAGTGCTaGTCCAGTTTGTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPWKRKC*SSLSFS
Trigger: GGAAAAGGACAAACTGGACCAGCACTTACGCTTCCA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCACCTGGATAAAATCTaGGAACCGTTTCTTACAAGT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDHLDKI*EPFLTS
Trigger: ACTTGTAAGAAACGGTTCCCAGATTTTATCCAGGTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGATAAACCCCAGTGTATaGATGAGAGACAAAACTGTG +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMINPSV*MRDKTV
Trigger: CACAGTTTTGTCTCTCATCCATACACTGGGGTTTAT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCCACAATATCCACACTaGCTACATACATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMPQYPH*LHTCFP
Trigger: TGGAAAACATGTATGTAGCCAGTGTGGATATTGTGG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCCACAATATCCACACTaGCTACATACATGTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDPQYPH*LHTCFP
Trigger: TGGAAAACATGTATGTAGCCAGTGTGGATATTGTGG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTATCAAGAGAAACCTTaGGGTGAATGTAACAGTCTT +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDYQEKP*GECNSL
Trigger: AAGACTGTTACATTCACCTCAAGGTTTCTCTTGATA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCAAAAACCGAGGGTTTaGAGAGTCAATTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDQKPRV*RVNLIK
Trigger: CTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCAAAAACCGAGGGTTTaGAGAGTCAATTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSQKPRV*RVNLIK
Trigger: CTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGTTGTCCACCTTTGTaGAATAATGAAGAACTATCA +
Preference number: 4 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGCPPL*NNEELS
Trigger: TGATAGTTCTTCATTATTTCACAAAGGTGGACAACC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGGTTGTCCACCTTTGTaGAATAATGAAGAACTATCA +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSGCPPL*NNEELS
Trigger: TGATAGTTCTTCATTATTTCACAAAGGTGGACAACC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGTTGTCCACCTTTGTaGAATAATGAAGAACTATCA +
Preference number: 4 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGCPPL*NNEELS
Trigger: TGATAGTTCTTCATTATTTCACAAAGGTGGACAACC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGGTTTAGATTCTGCTaGCATCAAGCAGCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGFRFC*HQAAFS
Trigger: AGAAAAGGCTGCTTGATGTCAGCAGAATCTAAACCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTCCCTTATAACTACCTaGATTATTAGAAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSSLITT*IIRSGH
Trigger: ATGGCCACTTCTAATAATTCAGGTAGTTATAAGGGA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGATTATGCATCCTCTaGATGTGTTCCCGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGLCIL*MCSRSL
Trigger: CAAACTACGGGAACACATGCAGAGGATGCATAATCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATTCTTTCGAATGTGCTaGACCATCTTGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPFFRMC*TILVLL
Trigger: CAGCAAGACCAAGATGGTCCAGCACATTCGAAAGAA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAATTCAAGCTCCAGGGTaGAAGTCATGGTTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPIQAPG*KSWFGD
Trigger: ATCACCAAACCATGACTTCCACCCTGGAGCTTGAAT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGTAATCATTACACTGTaGGACTTAGGGAACCCGAAC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPVIITL*DLGNPN
Trigger: GTTCGGGTTCCCTAAGTCCCACAGTGTAATGATTAC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGCGAGCTTTCATCTTTaGAATCCATCTTCTCCCAAC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPASFHL*NPSSPN
Trigger: GTTGGGAGAAGATGGATTCCAAAGATGAAAGCTCGC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCACACTGGACTGAATaGAGTCTACAGTGTCAATGT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSHWTE*SLQCQC
Trigger: ACATTGACACTGTAGACTTCATTCAGTCCAGTGTGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAATACTCACACTGGACTaGATGAAGTCTACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPILTLD*MKSTVS
Trigger: TGACACTGTAGACTTCATTCAGTCCAGTGTGAGTAT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGCCAATTCTTCTCTTaGTCTCGAAGAACTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGQFFS*SRRTFL
Trigger: AAGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGAATTGAGATGCTGTTaGAACTGCTCCGAGCTTATA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPELRCC*NCSELI
Trigger: TATAAGCTCGGAGCAGTTGCAACAGCATCTCAATTC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAAGTAGTAACTGGAGTTaGCACACCACTGTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSSNWS*HTTVCN
Trigger: ATTACAGACAGTGGTGTGGCAACTCCAGTTACTACT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACATGATAAATGGATCCTaGAAGGCAGAACAAAATTTC +
Preference number: 4 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDMINGS*KAEQNF
Trigger: GAAATTTTGTTCTGCCTTGCAGGATCCATTTATCAT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACCCGAACCTGTGTTTTaGAATGCAGGGTCAATATTT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPPEPVF*NAGSIF
Trigger: AAATATTGACCCTGCATTGCAAAACACAGGTTCGGG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGGCTTTGCGCTTGCTaGCACTTTTATAAACCTTAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGLCAC*HFYKPY
Trigger: ATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCCTGTCTCCACCTTTaGTATGAACACAATATGCCA +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSCLHL*YEHNMP
Trigger: TGGCATATTGTGTTCATACCAAAGGTGGAGACAGGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCCTCAGAAATGTCATaGATTTTCTGGTTCACGAAC +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSSEMS*IFWFTN
Trigger: GTTCGTGAACCAGAAAATTCATGACATTTCTGAGGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACATTTGAATCTCAGATaGATAGCCACGGAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPHLNLR*IATEGI
Trigger: AATTCCTTCCGTGGCTATTCATCTGAGATTCAAATG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR GCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGAGAGGGCAGAAGTTTaGTTTTCTTCCAATTCTGAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPERAEV*FSSNSD
Trigger: ATCAGAATTGGAAGAAAAGCAAACTTCTGCCCTCTC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACAAATTGCTCCTTTGTaGGAAAATGTAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPQIAPL*ENVASP
Trigger: AGGACTTGCTACATTTTCCCACAAAGGAGCAATTTG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACAAAAACCGAGGGTTTaGAGAGTCAATTTGATAAAG +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPQKPRV*RVNLIK
Trigger: CTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR TCA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCCCTTATAACTACCTaGATTATTAGAAGTGGCCAT +
Preference number: 4 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSLITT*IIRSGH
Trigger: ATGGCCACTTCTAATAATTCAGGTAGTTATAAGGGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS GCA 90 bp AGGCTCGCCCTGGCCCGGGTGAGCACCGGCCGGTTGGGGATCGGGTaGAAGGGGCCGTGCTTCGGACACACTGAAGCATGCGCGTTATTG +
Preference number: 5 (lower is better)
Translates to: RLALARVSTGRLGIG*KGPCFGHTEACALL
Trigger: CAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCGGCCGGTGCTCACCCGGGCCAGGGCGAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp AGCAGACGGGAGGGGTGGCGATGGTGCCCGTCAGCTGGGTGTGTGTaGTCAGCATGGGGTCTGGCTCTCCAGGACCAGCGGGTCGGAGCT +
Preference number: 5 (lower is better)
Translates to: SRREGWRWCPSAGCV*SAWGLALQDQRVGA
Trigger: AGCTCCGACCCGCTGGTCCTGGAGAGCCAGACCCCATGCTGAGCACACACACCCAGCTGACGGGCACCATCGCCACCCCTCCCGTCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CGGATGCGCTTGGCTCTGCGCATGTCGTCGGCTGTCAGCGTGCTCTaGGTGGGCACCACGCTCTCTTCATGCTGCGGCTGCAGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: RMRLALRMSSAVSVL*VGTTLSSCCGCRCR
Trigger: CCTGCACCTGCAGCCGCAGCATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCATCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp GCCCGGGTGAGCACCGGCCGGTTGGGGATCGGGTGCAAGGGGCCGTaGTTCGGACACACTGAAGCATGCGCGTTATTGCACTCCTCACAC +
Preference number: 5 (lower is better)
Translates to: ARVSTGRLGIGCKGP*FGHTEACALLHSSH
Trigger: GTGTGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCGGCCGGTGCTCACCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp CCAATCGGATGCGCTTGGCTCTGCGCATGTCGTCGGCTGTCAGCGTaGTCTGGGTGGGCACCACGCTCTCTTCATGCTGCGGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: PIGCAWLCACRRLSA*SGWAPRSLHAAAAG
Trigger: ACCTGCAGCCGCAGCATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCATCCGATTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000423662.6
ENST00000526082.5
CDS GCA 90 bp CATTTCGGATGCGCTTGGCTCTGCGCATGTCGTCGGCTGTCAGCGTaGTCTGGGTGGGCACCACGCTCTCTTCATGCTGCGGCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: HFGCAWLCACRRLSA*SGWAPRSLHAAAAG
Trigger: ACCTGCAGCCGCAGCATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCATCCGAAATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS GCA 90 bp GCTGAAGAGCTGCATTCTGCAGCTCCAATCGGATGCGCTTGGCTCTaGGCATGTCGTCGGCTGTCAGCGTGCTCTGGGTGGGCACCACGC +
Preference number: 5 (lower is better)
Translates to: AEELHSAAPIGCAWL*ACRRLSACSGWAPR
Trigger: GCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCATCCGATTGGAGCTGCAGAATGCAGCTCTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000423662.6
ENST00000526082.5
CDS CCA 90 bp CTCCTCACACCACAAGTCGTGTGGGTCGAAGGGCCGGGGCGGGTCTaGCTCCCAGTCATCCAGATCCGTGTCCTCACCGTCTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LLTPQVVWVEGPGRV*LPVIQIRVLTVFFL
Trigger: GAGGAAGAAGACGGTGAGGACACGGATCTGGATGACTGGGAGCCAGACCCGCCCCGGCCCTTCGACCCACACGACTTGTGGTGTGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS TCA 90 bp CGGCCGGTTGGGGATCGGGTGCAAGGGGCCGTGCTTCGGACACACTaGAGCATGCGCGTTATTGCACTCCTCACACCACAAGTCGTGTGG +
Preference number: 5 (lower is better)
Translates to: RPVGDRVQGAVLRTH*SMRVIALLTPQVVW
Trigger: CCACACGACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp TCCAGGACCAGCGGGTCGGAGCTTCCGAATGCTCGGTGGGAGCTCTaGTCCTGGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: SRTSGSELPNARWEL*SWVVLQNVGFALAG
Trigger: GCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGACCCGCTGGTCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp TGCACAGAGGAATTCTGCTGCTGCTGCTGCTGCTGCTGCAGAGCCTaGCCCTGTGTGGAAGAACTGCCCTGGATGTGGGAGGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: CTEEFCCCCCCCCRA*PCVEELPWMWEGLS
Trigger: GCTCAGCCCCTCCCACATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp CTGGGCAGGTACGTGTGCTGCACAGAGGAATTCTGCTGCTGCTGCTaGTGCTGCTGCAGAGCCTGCCCCTGTGTGGAAGAACTGCCCTGG +
Preference number: 5 (lower is better)
Translates to: LGRYVCCTEEFCCCC*CCCRACPCVEELPW
Trigger: CCAGGGCAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp GCACTGGGCAGGTACGTGTGCTGCACAGAGGAATTCTGCTGCTGCTaGTGCTGCTGCTGCAGAGCCTGCCCCTGTGTGGAAGAACTGCCC +
Preference number: 5 (lower is better)
Translates to: ALGRYVCCTEEFCCC*CCCCRACPCVEELP
Trigger: GGGCAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp ATGTGCTGGACCATCTTGGTCTTGCTGCTGTACTGCTTGGAGCAGTaGGGACAGCAGACGGGAGGGGTGGCGATGGTGCCCGTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: MCWTILVLLLYCLEQ*GQQTGGVAMVPVSW
Trigger: CCAGCTGACGGGCACCATCGCCACCCCTCCCGTCTGCTGTCCCCACTGCTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCCAGCACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp GGCAGGTACGTGTGCTGCACAGAGGAATTCTGCTGCTGCTGCTGCTaGTGCTGCAGAGCCTGCCCCTGTGTGGAAGAACTGCCCTGGATG +
Preference number: 5 (lower is better)
Translates to: GRYVCCTEEFCCCCC*CCRACPCVEELPWM
Trigger: CATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp TCACAGGTCAGTGGGCAGTTCCCCTCCCGCCCATGGAAGCGTAAGTaGTGGTCCAGTTTGTCCTTTTCCCGGAAGGCCTTCCCACACTGC +
Preference number: 5 (lower is better)
Translates to: SQVSGQFPSRPWKRK*WSSLSFSRKAFPHC
Trigger: GCAGTGTGGGAAGGCCTTCCGGGAAAAGGACAAACTGGACCAGCACTTACGCTTCCATGGGCGGGAGGGGAACTGCCCACTGACCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp TACGTGTGCTGCACAGAGGAATTCTGCTGCTGCTGCTGCTGCTGCTaGAGAGCCTGCCCCTGTGTGGAAGAACTGCCCTGGATGTGGGAG +
Preference number: 5 (lower is better)
Translates to: YVCCTEEFCCCCCCC*RACPCVEELPWMWE
Trigger: CTCCCACATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp AGGTACGTGTGCTGCACAGAGGAATTCTGCTGCTGCTGCTGCTGCTaGTGCAGAGCCTGCCCCTGTGTGGAAGAACTGCCCTGGATGTGG +
Preference number: 5 (lower is better)
Translates to: RYVCCTEEFCCCCCC*CRACPCVEELPWMW
Trigger: CCACATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp CAAGCACTGGGCAGGTACGTGTGCTGCACAGAGGAATTCTGCTGCTaGTGCTGCTGCTGCTGCAGAGCCTGCCCCTGTGTGGAAGAACTG +
Preference number: 5 (lower is better)
Translates to: QALGRYVCCTEEFCC*CCCCCRACPCVEEL
Trigger: CAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAGTGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CAGGTCAGTGGGCAGTTCCCCTCCCGCCCATGGAAGCGTAAGTGCTaGTCCAGTTTGTCCTTTTCCCGGAAGGCCTTCCCACACTGCAAG +
Preference number: 5 (lower is better)
Translates to: QVSGQFPSRPWKRKC*SSLSFSRKAFPHCK
Trigger: CTTGCAGTGTGGGAAGGCCTTCCGGGAAAAGGACAAACTGGACCAGCACTTACGCTTCCATGGGCGGGAGGGGAACTGCCCACTGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS TCA 90 bp TTCCACCGGGTGGATGTACACCAGCGTGTGCTCTGGACCATCCACTaGTGTGTAGGAGGCACCATCTGCCGTGTACACCACCTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: FHRVDVHQRVLWTIH*CVGGTICRVHHLLW
Trigger: CCACAGCAGGTGGTGTACACGGCAGATGGTGCCTCCTACACATCAGTGGATGGTCCAGAGCACACGCTGGTGTACATCCACCCGGTGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS GCA 90 bp TTGGGGATCGGGTGCAAGGGGCCGTGCTTCGGACACACTGAAGCATaGGCGTTATTGCACTCCTCACACCACAAGTCGTGTGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: LGIGCKGPCFGHTEA*ALLHSSHHKSCGSK
Trigger: CTTCGACCCACACGACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCCGATCCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp TTCCAAGCACTGGGCAGGTACGTGTGCTGCACAGAGGAATTCTGCTaGTGCTGCTGCTGCTGCTGCAGAGCCTGCCCCTGTGTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: FQALGRYVCCTEEFC*CCCCCCRACPCVEE
Trigger: TTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAGTGCTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp GAATTCCAAGCACTGGGCAGGTACGTGTGCTGCACAGAGGAATTCTaGTGCTGCTGCTGCTGCTGCTGCAGAGCCTGCCCCTGTGTGGAA +
Preference number: 5 (lower is better)
Translates to: EFQALGRYVCCTEEF*CCCCCCCRACPCVE
Trigger: TTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAGTGCTTGGAATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp ACCAGCGGGTCGGAGCTTCCGAATGCTCGGTGGGAGCTCTGCTCCTaGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTGCTGGCACTTTT +
Preference number: 5 (lower is better)
Translates to: TSGSELPNARWELCS*VVLQNVGFALAGTF
Trigger: AAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGACCCGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CTGTTGGCTGTTGGTCTGGGGGTCCAGGGAGTCACTGTGTGCAGGTaGCTCGACCTGGACTCCACCAGAGAGGGCAGAAGTTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: LLAVGLGVQGVTVCR*LDLDSTREGRSLLF
Trigger: GAAAAGCAAACTTCTGCCCTCTCTGGTGGAGTCCAGGTCGAGCCACCTGCACACAGTGACTCCCTGGACCCCCAGACCAACAGCCAACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTGAGCACCGGCCGGTaGGGGATCGGGTGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVSTGR*GIGCKG
Trigger: CCCCTTGCACCCGATCCCCAACCGGCCGGTGCTCAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS GCA 90 bp CTTCCGTTCCCGTTGGTGGTGGTGGTGATGATGTACTGTGTGGTCTaGTGTTGGCTGTTGGTCTGGGGGTCCAGGGAGTCACTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: LPFPLVVVVMMYCVV*CWLLVWGSRESLCA
Trigger: TGCACACAGTGACTCCCTGGACCCCCAGACCAACAGCCAACAGCAGACCACACAGTACATCATCACCACCACCACCAACGGGAACGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS TCA 90 bp GGTAGTCTGTCGTTAAGGTCTGGGACAGTTCTGTCATTGCTTGGGTaGGCAGGTCCGTCGTCACCACAGTCTCTCCAGTGGCGCTGTCTG +
Preference number: 5 (lower is better)
Translates to: GSLSLRSGTVLSLLG*AGPSSPQSLQWRCL
Trigger: CAGACAGCGCCACTGGAGAGACTGTGGTGACGACGGACCTGCTCACCCAAGCAATGACAGAACTGTCCCAGACCTTAACGACAGACTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp AATTGCTTCCCACAGGTGGAACACAGGAAGTCTTTGCGGTCCGAATaGCGGAGCATGTGGAGTCGCAGTTTATCGGGGCGACAGAAGGCC +
Preference number: 5 (lower is better)
Translates to: NCFPQVEHRKSLRSE*RSMWSRSLSGRQKA
Trigger: GGCCTTCTGTCGCCCCGATAAACTGCGACTCCACATGCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTTCCACCTGTGGGAAGCAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CTTTTGGTTCGCTGGTGCCTGCTGGCACAAACAGGGCGCAAGGGCTaGCTGAAATCTAGTCTTCCTACCAACTCCTTCCAGGCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: LLVRWCLLAQTGRKG*LKSSLPTNSFQALE
Trigger: TTCCAGGGCCTGGAAGGAGTTGGTAGGAAGACTAGATTTCAGCCAGCCCTTGCGCCCTGTTTGTGCCAGCAGGCACCAGCGAACCAAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS CCA 90 bp TTGTTACAGAGATCACAGGTCAGTGGGCAGTTCCCCTCCCGCCCATaGAAGCGTAAGTGCTGGTCCAGTTTGTCCTTTTCCCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LLQRSQVSGQFPSRP*KRKCWSSLSFSRKA
Trigger: GGCCTTCCGGGAAAAGGACAAACTGGACCAGCACTTACGCTTCCATGGGCGGGAGGGGAACTGCCCACTGACCTGTGATCTCTGTAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CAGGTGGAACACAGGAAGTCTTTGCGGTCCGAATGCCGGAGCATGTaGAGTCGCAGTTTATCGGGGCGACAGAAGGCCTTGTCACACTCT +
Preference number: 5 (lower is better)
Translates to: QVEHRKSLRSECRSM*SRSLSGRQKALSHS
Trigger: AGAGTGTGACAAGGCCTTCTGTCGCCCCGATAAACTGCGACTCCACATGCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTTCCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CGTCACCACAGTCTCTCCAGTGGCGCTGTCTGTAGTCAAAACCGCTaGGGTGGCACTGATCACAGCTGTCGTCAGTGGTGTGTGTATGGT +
Preference number: 5 (lower is better)
Translates to: RHHSLSSGAVCSQNR*GGTDHSCRQWCVYG
Trigger: ACCATACACACACCACTGACGACAGCTGTGATCAGTGCCACCCCAGCGGTTTTGACTACAGACAGCGCCACTGGAGAGACTGTGGTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGTGAGCACCGGCCGGTaGGGGATCGGGTGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTVSTGR*GIGCKG
Trigger: CCCCTTGCACCCGATCCCCAACCGGCCGGTGCTCAC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACCAAACTGGGTGCGCTaGGGGATGCGCCGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPPNWVR*GMRRLE
Trigger: CTCCAAGCGGCGCATCCCCAAGCGCACCCAGTTTGG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCCAAACTGGGTGCGCTaGGGGATGCGCCGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSPNWVR*GMRRLE
Trigger: CTCCAAGCGGCGCATCCCCAAGCGCACCCAGTTTGG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCGGGGCTTGAACGTCTaGGAGCGGCTGATGCGGTCG +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSRGLNV*ERLMRS
Trigger: CGACCGCATCAGCCGCTCCAAGACGTTCAAGCCCCG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS TCA 90 bp TGGTTCGCTGGTGCCTGCTGGCACAAACAGGGCGCAAGGGCTGGCTaGAATCTAGTCTTCCTACCAACTCCTTCCAGGCCCTGGAAAAAT +
Preference number: 5 (lower is better)
Translates to: WFAGACWHKQGARAG*NLVFLPTPSRPWKN
Trigger: ATTTTTCCAGGGCCTGGAAGGAGTTGGTAGGAAGACTAGATTTCAGCCAGCCCTTGCGCCCTGTTTGTGCCAGCAGGCACCAGCGAACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS GCA 90 bp AGGCACAGAGTAAGCAGACATGGACACCTGCTTTTGGTTCGCTGGTaGCTGCTGGCACAAACAGGGCGCAAGGGCTGGCTGAAATCTAGT +
Preference number: 5 (lower is better)
Translates to: RHRVSRHGHLLLVRW*LLAQTGRKGWLKSS
Trigger: ACTAGATTTCAGCCAGCCCTTGCGCCCTGTTTGTGCCAGCAGGCACCAGCGAACCAAAAGCAGGTGTCCATGTCTGCTTACTCTGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS CCA 90 bp TTGGTCTGGGGGTCCAGGGAGTCACTGTGTGCAGGTGGCTCGACCTaGACTCCACCAGAGAGGGCAGAAGTTTGCTTTTCTTCCAATTCT +
Preference number: 5 (lower is better)
Translates to: LVWGSRESLCAGGST*TPPERAEVCFSSNS
Trigger: AGAATTGGAAGAAAAGCAAACTTCTGCCCTCTCTGGTGGAGTCCAGGTCGAGCCACCTGCACACAGTGACTCCCTGGACCCCCAGACCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGACCGAATCGCCTCTaGCCTCGTCCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPGPNRL*PRPLPL
Trigger: CAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTCC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGACGTGATGCGGGGCTaGAACGTCTTGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPDVMRG*NVLERL
Trigger: CAGCCGCTCCAAGACGTTCAAGCCCCGCATCACGTC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTCTGCTGTTGGCTGTaGGTCTGGGGGTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVCCWL*VWGSRE
Trigger: CTCCCTGGACCCCCAGACCAACAGCCAACAGCAGAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCAGCATGCACGACGTaGGGTGAGGGGAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPAACTT*GEGSWK
Trigger: CTTCCAGCTCCCCTCACCCAACGTCGTGCATGCTGC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS TCA 90 bp CTTCCATCTACCGGCTGTGAGGAAGAGCTGGCTTCATTTTTGATCTaGCTGCTCACAGCCTTTAAGCCTCTGCCCTCCCTCTGCCCCTTC +
Preference number: 5 (lower is better)
Translates to: LPSTGCEEELASFLI*LLTAFKPLPSLCPF
Trigger: GAAGGGGCAGAGGGAGGGCAGAGGCTTAAAGGCTGTGAGCAGTCAGATCAAAAATGAAGCCAGCTCTTCCTCACAGCCGGTAGATGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423662.6
CDS GCA 90 bp GGTGCTGGATTCAAGCTCCAGGGTGGAAGTCATGGTTTGGTGATATaGACTTCGCTGCTTCCGTTCCCGTTGGTGGTGGTGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: GAGFKLQGGSHGLVI*TSLLPFPLVVVVMM
Trigger: CATCATCACCACCACCACCAACGGGAACGGAAGCAGCGAAGTGCATATCACCAAACCATGACTTCCACCCTGGAGCTTGAATCCAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS CCA 90 bp GCCACACATGCGAGCTTTCATCTTTGGAATCCATCTTCTCCCAACTaGACAGCTCCACGTCTGGCACACCTAGAGCAGCACAGGGTACAG +
Preference number: 5 (lower is better)
Translates to: ATHASFHLWNPSSPN*TAPRLAHLEQHRVQ
Trigger: CTGTACCCTGTGCTGCTCTAGGTGTGCCAGACGTGGAGCTGTCCAGTTGGGAGAAGATGGATTCCAAAGATGAAAGCTCGCATGTGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCATTTCGGATGCGCTaGGCTCTGCGCATGTCGTCG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPAFRMR*ALRMSS
Trigger: CGACGACATGCGCAGAGCCAAGCGCATCCGAAATGC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGGCGACAGAAGGCCTaGTCACACTCTGTGCACTGG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPGRQKA*SHSVHW
Trigger: CCAGTGCACAGAGTGTGACAAGGCCTTCTGTCGCCC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCTGTGTGGTCTGCTGTaGGCTGTTGGTCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSLCGLL*AVGLGV
Trigger: GACCCCCAGACCAACAGCCAACAGCAGACCACACAG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCCAATCGGATGCGCTaGGCTCTGCGCATGTCGTCG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSNRMR*ALRMSS
Trigger: CGACGACATGCGCAGAGCCAAGCGCATCCGATTGGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
CDS GCA 90 bp ATGACCCGAAGTAACCGCCTTCACCTGGCCAGTAGTAACTGGAGTTaGCACACCACTGTCTGTAATCACAAACTGACCCGGAGGAAGCGT +
Preference number: 5 (lower is better)
Translates to: MTRSNRLHLASSNWS*HTTVCNHKLTRRKR
Trigger: ACGCTTCCTCCGGGTCAGTTTGTGATTACAGACAGTGGTGTGGCAACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTACTTCGGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CTGGGTTTCCTGTGGCAGCTGAGGGATTGGGATAGTGGTCTGTTCTaGTTGATCCAGCCCATTCAGAGTGGCTGGTTCAGCCTCATCAAA +
Preference number: 5 (lower is better)
Translates to: LGFLWQLRDWDSGLF*LIQPIQSGWFSLIK
Trigger: TTTGATGAGGCTGAACCAGCCACTCTGAATGGGCTGGATCAACCAGAACAGACCACTATCCCAATCCCTCAGCTGCCACAGGAAACCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp TTCATGTTCCAGGGAAGACTGGGTTTCCTGTGGCAGCTGAGGGATTaGGATAGTGGTCTGTTCTGGTTGATCCAGCCCATTCAGAGTGGC +
Preference number: 5 (lower is better)
Translates to: FMFQGRLGFLWQLRD*DSGLFWLIQPIQSG
Trigger: GCCACTCTGAATGGGCTGGATCAACCAGAACAGACCACTATCCCAATCCCTCAGCTGCCACAGGAAACCCAGTCTTCCCTGGAACATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp GTTCATGCTCTGCAGATGTCGGCCACACATGCGAGCTTTCATCTTTaGAATCCATCTTCTCCCAACTGGACAGCTCCACGTCTGGCACAC +
Preference number: 5 (lower is better)
Translates to: VHALQMSATHASFHL*NPSSPNWTAPRLAH
Trigger: GTGTGCCAGACGTGGAGCTGTCCAGTTGGGAGAAGATGGATTCCAAAGATGAAAGCTCGCATGTGTGGCCGACATCTGCAGAGCATGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCATGGACACCTGCTTTaGGTTCGCTGGTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSHGHLL*VRWCLL
Trigger: CAGCAGGCACCAGCGAACCAAAAGCAGGTGTCCATG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGTGAGCACCGGCCGGTaGGGGATCGGGTGCAAGGGG +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSVSTGR*GIGCKG
Trigger: CCCCTTGCACCCGATCCCCAACCGGCCGGTGCTCAC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTTGGGGATGCGCCGCTaGGAGAACACCCCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGLGMRR*ENTPPR
Trigger: TCTGGGCGGGGTGTTCTCCAAGCGGCGCATCCCCAA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGACCGAATCGCCTCTaGCCTCGTCCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGPNRL*PRPLPL
Trigger: CAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTCC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGAACACAGGAAGTCTTaGCGGTCCGAATGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPEHRKS*RSECRS
Trigger: GCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTTC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCGGGGCTTGAACGTCTaGGAGCGGCTGATGCGGTCG +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGRGLNV*ERLMRS
Trigger: CGACCGCATCAGCCGCTCCAAGACGTTCAAGCCCCG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGTCTGCTGTTGGCTGTaGGTCTGGGGGTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTVCCWL*VWGSRE
Trigger: CTCCCTGGACCCCCAGACCAACAGCCAACAGCAGAC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTGCTTCCGTTCCCGTaGGTGGTGGTGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLLPFP*VVVVMM
Trigger: CATCATCACCACCACCACCAACGGGAACGGAAGCAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCTGCTTCCGTTCCCGTaGGTGGTGGTGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSLLPFP*VVVVMM
Trigger: CATCATCACCACCACCACCAACGGGAACGGAAGCAG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS GCA 90 bp GGAGTCGCAGTTTATCGGGGCGACAGAAGGCCTTGTCACACTCTGTaGACTGGTAGATCTTTTCTGAGTGGAAGCTGCGCACGTGTTTTT +
Preference number: 5 (lower is better)
Translates to: GVAVYRGDRRPCHTL*TGRSFLSGSCARVF
Trigger: AAAAACACGTGCGCAGCTTCCACTCAGAAAAGATCTACCAGTGCACAGAGTGTGACAAGGCCTTCTGTCGCCCCGATAAACTGCGACTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp GTCAGTGGTGTGTGTATGGTGTTGGAGAGCTGGGCGAACTCTGGATaGTTCTTTCGAATGTGCTGGACCATCTTGGTCTTGCTGCTGTAC +
Preference number: 5 (lower is better)
Translates to: VSGVCMVLESWANSG*FFRMCWTILVLLLY
Trigger: GTACAGCAGCAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCATACACACACCACTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp GGTGTGAGTTTCTGGTTCATGTTCCAGGGAAGACTGGGTTTCCTGTaGCAGCTGAGGGATTGGGATAGTGGTCTGTTCTGGTTGATCCAG +
Preference number: 5 (lower is better)
Translates to: GVSFWFMFQGRLGFL*QLRDWDSGLFWLIQ
Trigger: CTGGATCAACCAGAACAGACCACTATCCCAATCCCTCAGCTGCCACAGGAAACCCAGTCTTCCCTGGAACATGAACCAGAAACTCACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp TGTCGTCAGTGGTGTGTGTATGGTGTTGGAGAGCTGGGCGAACTCTaGATGCTTCTTTCGAATGTGCTGGACCATCTTGGTCTTGCTGCT +
Preference number: 5 (lower is better)
Translates to: CRQWCVYGVGELGEL*MLLSNVLDHLGLAA
Trigger: AGCAGCAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCATACACACACCACTGACGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CTGATCACAGCTGTCGTCAGTGGTGTGTGTATGGTGTTGGAGAGCTaGGCGAACTCTGGATGCTTCTTTCGAATGTGCTGGACCATCTTG +
Preference number: 5 (lower is better)
Translates to: LITAVVSGVCMVLES*ANSGCFFRMCWTIL
Trigger: CAAGATGGTCCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCATACACACACCACTGACGACAGCTGTGATCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 90 bp CACATAATGACCCGAAGTAACCGCCTTCACCTGGCCAGTAGTAACTaGAGTTGCCACACCACTGTCTGTAATCACAAACTGACCCGGAGG +
Preference number: 5 (lower is better)
Translates to: HIMTRSNRLHLASSN*SCHTTVCNHKLTRR
Trigger: CCTCCGGGTCAGTTTGTGATTACAGACAGTGGTGTGGCAACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTACTTCGGGTCATTATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCCAAACTGGGTGCGCTaGGGGATGCGCCGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYPNWVR*GMRRLE
Trigger: CTCCAAGCGGCGCATCCCCAAGCGCACCCAGTTTGG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAGTGCTGGTCCAGTTaGTCCTTTTCCCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSKCWSS*SFSRKA
Trigger: GGCCTTCCGGGAAAAGGACAAACTGGACCAGCACTT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAAGTGCTGGTCCAGTTaGTCCTTTTCCCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPKCWSS*SFSRKA
Trigger: GGCCTTCCGGGAAAAGGACAAACTGGACCAGCACTT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGACGTGATGCGGGGCTaGAACGTCTTGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGDVMRG*NVLERL
Trigger: CAGCCGCTCCAAGACGTTCAAGCCCCGCATCACGTC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGGTGTGTGTATGGTGTaGGAGAGCTGGGCGAACTCT +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPGVCMV*ESWANS
Trigger: AGAGTTCGCCCAGCTCTCCAACACCATACACACACC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGGTGTGTGTATGGTGTaGGAGAGCTGGGCGAACTCT +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSGVCMV*ESWANS
Trigger: AGAGTTCGCCCAGCTCTCCAACACCATACACACACC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACAGTTCTGTCATTGCTaGGGTGAGCAGGTCCGTCGT +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPQFCHC*GEQVRR
Trigger: ACGACGGACCTGCTCACCCAAGCAATGACAGAACTG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACTGTGTGGTCTGCTGTaGGCTGTTGGTCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTLCGLL*AVGLGV
Trigger: GACCCCCAGACCAACAGCCAACAGCAGACCACACAG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGCAGCATGCACGACGTaGGGTGAGGGGAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGAACTT*GEGSWK
Trigger: CTTCCAGCTCCCCTCACCCAACGTCGTGCATGCTGC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS GCA 90 bp TGTGTCCGGAACAAAGTGCACCTGTGCGGCATTCTGTTCATGCTCTaGAGATGTCGGCCACACATGCGAGCTTTCATCTTTGGAATCCAT +
Preference number: 5 (lower is better)
Translates to: CVRNKVHLCGILFML*RCRPHMRAFIFGIH
Trigger: ATGGATTCCAAAGATGAAAGCTCGCATGTGTGGCCGACATCTGCAGAGCATGAACAGAATGCCGCACAGGTGCACTTTGTTCCGGACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS CCA 90 bp GCCATACTGGTAAGCCACCAGGTTCTGCTCCAGGTGATTCTGGGCTaGCCGTACAAACATCATCCAGTTACAAAGCGTCTCATCAGACAA +
Preference number: 5 (lower is better)
Translates to: AILVSHQVLLQVILG*PYKHHPVTKRLIRQ
Trigger: TTGTCTGATGAGACGCTTTGTAACTGGATGATGTTTGTACGGCCAGCCCAGAATCACCTGGAGCAGAACCTGGTGGCTTACCAGTATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCATCCTCTTCCTCTTaGGCCTCCAGTCTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSSSSS*ASSLPR
Trigger: TCTAGGCAGACTGGAGGCCAAAGAGGAAGAGGATGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTCATCCTCTTCCTCTTaGGCCTCCAGTCTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSSSSS*ASSLPR
Trigger: TCTAGGCAGACTGGAGGCCAAAGAGGAAGAGGATGA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTTGGGGATGCGCCGCTaGGAGAACACCCCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNLGMRR*ENTPPR
Trigger: TCTGGGCGGGGTGTTCTCCAAGCGGCGCATCCCCAA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCCAAACTGGGTGCGCTaGGGGATGCGCCGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNPNWVR*GMRRLE
Trigger: CTCCAAGCGGCGCATCCCCAAGCGCACCCAGTTTGG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGCATTTCGGATGCGCTaGGCTCTGCGCATGTCGTCG +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGAFRMR*ALRMSS
Trigger: CGACGACATGCGCAGAGCCAAGCGCATCCGAAATGC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGGCGACAGAAGGCCTaGTCACACTCTGTGCACTGG +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGRQKA*SHSVHW
Trigger: CCAGTGCACAGAGTGTGACAAGGCCTTCTGTCGCCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCGGGGCTTGAACGTCTaGGAGCGGCTGATGCGGTCG +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMRGLNV*ERLMRS
Trigger: CGACCGCATCAGCCGCTCCAAGACGTTCAAGCCCCG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCGGGGCTTGAACGTCTaGGAGCGGCTGATGCGGTCG +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNRGLNV*ERLMRS
Trigger: CGACCGCATCAGCCGCTCCAAGACGTTCAAGCCCCG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATGGACCATCTTGGTCTaGCTGCTGTACTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPWTILV*LLYCLE
Trigger: CTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCCA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTGGACCATCTTGGTCTaGCTGCTGTACTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSWTILV*LLYCLE
Trigger: CTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCCA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTCTCTGGTAATCCCCTaGTGGCGTTCGGTAGTCTGT +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSLVIP*WRSVVC
Trigger: ACAGACTACCGAACGCCACAAGGGGATTACCAGAGA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGTCTGCTGTTGGCTGTaGGTCTGGGGGTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYVCCWL*VWGSRE
Trigger: CTCCCTGGACCCCCAGACCAACAGCCAACAGCAGAC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGCTGTAGCATCCTGTaGGACATAAGCTACCTGGCC +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSCSIL*DISYLA
Trigger: GGCCAGGTAGCTTATGTCCAACAGGATGCTACAGCT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS TCA 90 bp TGCAAGCATTTAAAAGGCCGGAAGGACTTCCGAATAAACAGATGCTaGAGAGCTGCATTCTGCAGCTCCAATCGGATGCGCTTGGCTCTG +
Preference number: 5 (lower is better)
Translates to: CKHLKGRKDFRINRC*RAAFCSSNRMRLAL
Trigger: CAGAGCCAAGCGCATCCGATTGGAGCTGCAGAATGCAGCTCTTCAGCATCTGTTTATTCGGAAGTCCTTCCGGCCTTTTAAATGCTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000423662.6
ENST00000526082.5
CDS TCA 90 bp CAACTCCTTCCAGGCCCTGGAAAAATGACTTCCATCTACCGGCTGTaGGGAAGAGCTGGCTTCATTTTTGATCTGACTGCTCACAGCCTT +
Preference number: 5 (lower is better)
Translates to: QLLPGPGKMTSIYRL*GRAGFIFDLTAHSL
Trigger: AAGGCTGTGAGCAGTCAGATCAAAAATGAAGCCAGCTCTTCCTCACAGCCGGTAGATGGAAGTCATTTTTCCAGGGCCTGGAAGGAGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000423662.6
CDS CCA 90 bp TCATTTGAATCTCAGATGAATAGCCACGGAAGGAATTCCAAGCACTaGGCAGGTACGTGTGCTGCACAGAGGAATTCTGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: SFESQMNSHGRNSKH*AGTCAAQRNSAAAA
Trigger: AGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAGTGCTTGGAATTCCTTCCGTGGCTATTCATCTGAGATTCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGACCGAATCGCCTCTaGCCTCGTCCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGPNRL*PRPLPL
Trigger: CAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGACCGAATCGCCTCTaGCCTCGTCCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGPNRL*PRPLPL
Trigger: CAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAAGTGCTGGTCCAGTTaGTCCTTTTCCCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTKCWSS*SFSRKA
Trigger: GGCCTTCCGGGAAAAGGACAAACTGGACCAGCACTT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTC +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSLLMKP*LQRSQV
Trigger: GACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGAACACAGGAAGTCTTaGCGGTCCGAATGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGEHRKS*RSECRS
Trigger: GCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTTC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAATGCGGTCGGCTTTCTaGGCCTCCCTCTCAGGATTA +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTMRSAF*ASLSGL
Trigger: TAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCAT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGACGTGATGCGGGGCTaGAACGTCTTGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDDVMRG*NVLERL
Trigger: CAGCCGCTCCAAGACGTTCAAGCCCCGCATCACGTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGACGTGATGCGGGGCTaGAACGTCTTGGAGCGGCTG +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSDVMRG*NVLERL
Trigger: CAGCCGCTCCAAGACGTTCAAGCCCCGCATCACGTC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACAGTTCTGTCATTGCTaGGGTGAGCAGGTCCGTCGT +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTQFCHC*GEQVRR
Trigger: ACGACGGACCTGCTCACCCAAGCAATGACAGAACTG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGATACCGAGGCCACTaGAACCACTTGCAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSRYRGH*NHLQLY
Trigger: ATACAGCTGCAAGTGGTTCAAGTGGCCTCGGTATCT...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304538.10
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGTCTGCTGTTGGCTGTaGGTCTGGGGGTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNVCCWL*VWGSRE
Trigger: CTCCCTGGACCCCCAGACCAACAGCCAACAGCAGAC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCTGCTTCCGTTCCCGTaGGTGGTGGTGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGLLPFP*VVVVMM
Trigger: CATCATCACCACCACCACCAACGGGAACGGAAGCAG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAAATGCCCCTTCTCCTTaGGTGCCATGGCTTGGAATA +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPNAPSP*VPWLGI
Trigger: TATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATT...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGCAGCATGCACGACGTaGGGTGAGGGGAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDAACTT*GEGSWK
Trigger: CTTCCAGCTCCCCTCACCCAACGTCGTGCATGCTGC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAGTGGCCGAGGCCACTaGAACCACTTGCAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSGRGH*NHLQLY
Trigger: ATACAGCTGCAAGTGGTTCAAGTGGCCTCGGCCACT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCCAATCGGATGCGCTaGGCTCTGCGCATGTCGTCG +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSNRMR*ALRMSS
Trigger: CGACGACATGCGCAGAGCCAAGCGCATCCGATTGGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000358825.9
ENST00000423662.6
CDS GCA 90 bp ATGCGGTCGGCTTTCTTGGCCTCCCTCTCAGGATTATGCATCCTCTaGATGTGTTCCCGTAGTTTGTCTTTTCGCTTAAATTGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: MRSAFLASLSGLCIL*MCSRSLSFRLNCFP
Trigger: TGGGAAGCAATTTAAGCGAAAAGACAAACTACGGGAACACATGCAGAGGATGCATAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 90 bp TCGGTGGGAGCTCTGCTCCTGGGTGGTTCTTCAGAATGTGGGCTTTaGGCTTGCTGGCACTTTTATAAACCTTATCGCAATACTGACAAA +
Preference number: 5 (lower is better)
Translates to: SVGALLLGGSSECGL*ACWHFYKPYRNTDK
Trigger: TTTGTCAGTATTGCGATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCACCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGAGGGGTCTGCAGAGTaGCCAAAGGGTCGGACCCAT +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSEGSAE*PKGRTH
Trigger: ATGGGTCCGACCCTTTGGCAACTCTGCAGACCCCTC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCGGGCCAATTCTTCTCTaGCTCTCGAAGAACTTTCCT +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSGPILL*LSKNFP
Trigger: AGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCCC...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGCATTTCGGATGCGCTaGGCTCTGCGCATGTCGTCG +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMAFRMR*ALRMSS
Trigger: CGACGACATGCGCAGAGCCAAGCGCATCCGAAATGC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGGGCGACAGAAGGCCTaGTCACACTCTGTGCACTGG +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDGRQKA*SHSVHW
Trigger: CCAGTGCACAGAGTGTGACAAGGCCTTCTGTCGCCC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGAAGTCTTaGCGGTCCGAATGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYEHRKS*RSECRS
Trigger: GCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTTC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCATGCGGTCGGCTTTCTaGGCCTCCCTCTCAGGATTA +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGMRSAF*ASLSGL
Trigger: TAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCAT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTTCAGAATGTGGGCTTaGCGCTTGCTGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSFRMWA*RLLALL
Trigger: TAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCTGTGTGGTCTGCTGTaGGCTGTTGGTCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNLCGLL*AVGLGV
Trigger: GACCCCCAGACCAACAGCCAACAGCAGACCACACAG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCTGTGTGGTCTGCTGTaGGCTGTTGGTCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSLCGLL*AVGLGV
Trigger: GACCCCCAGACCAACAGCCAACAGCAGACCACACAG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCTGTGTGGTCTGCTGTaGGCTGTTGGTCTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDLCGLL*AVGLGV
Trigger: GACCCCCAGACCAACAGCCAACAGCAGACCACACAG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCTGCTTCCGTTCCCGTaGGTGGTGGTGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYLLPFP*VVVVMM
Trigger: CATCATCACCACCACCACCAACGGGAACGGAAGCAG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACCAGTAACCATGAACTaGGCACATCCTGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTPVTMN*AHPVST
Trigger: GGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAGCTGTAGCATCCTGTaGGACATAAGCTACCTGGCC +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTSCSIL*DISYLA
Trigger: GGCCAGGTAGCTTATGTCCAACAGGATGCTACAGCT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS TCA 90 bp CTGAAATCTAGTCTTCCTACCAACTCCTTCCAGGCCCTGGAAAAATaGCTTCCATCTACCGGCTGTGAGGAAGAGCTGGCTTCATTTTTG +
Preference number: 5 (lower is better)
Translates to: LKSSLPTNSFQALEK*LPSTGCEEELASFL
Trigger: CAAAAATGAAGCCAGCTCTTCCTCACAGCCGGTAGATGGAAGTCATTTTTCCAGGGCCTGGAAGGAGTTGGTAGGAAGACTAGATTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCATGGACACCTGCTTTaGGTTCGCTGGTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSHGHLL*VRWCLL
Trigger: CAGCAGGCACCAGCGAACCAAAAGCAGGTGTCCATG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATTGGGGATGCGCCGCTaGGAGAACACCCCGCCCAGA +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPLGMRR*ENTPPR
Trigger: TCTGGGCGGGGTGTTCTCCAAGCGGCGCATCCCCAA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACACTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTC +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTLLMKP*LQRSQV
Trigger: GACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAG...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGAACACAGGAAGTCTTaGCGGTCCGAATGCCGGAGC +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDEHRKS*RSECRS
Trigger: GCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTTC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCAGTCTTTTCGCTTAAATaGCTTCCCACAGGTGGAACA +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPVFSLK*LPTGGT
Trigger: TGTTCCACCTGTGGGAAGCAATTTAAGCGAAAAGAC...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCATGTGCTGGACCATCTaGGTCTTGCTGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGMCWTI*VLLLYC
Trigger: GCAGTACAGCAGCAAGACCAAGATGGTCCAGCACAT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCTGCTTCCGTTCCCGTaGGTGGTGGTGGTGATGATG +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMLLPFP*VVVVMM
Trigger: CATCATCACCACCACCACCAACGGGAACGGAAGCAG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGGTGGAAGTCATGGTTaGGTGATATGCACTTCGCTG +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTGGSHG*VICTSL
Trigger: CAGCGAAGTGCATATCACCAAACCATGACTTCCACC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCCAGTAACCATGAACTaGGCACATCCTGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGPVTMN*AHPVST
Trigger: GGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAATGCCCCTTCTCCTTaGGTGCCATGGCTTGGAATA +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTNAPSP*VPWLGI
Trigger: TATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCACTGATGGCTCATCATTaGCCATCTCTTCAAATCCAG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPLMAHH*PSLQIQ
Trigger: CTGGATTTGAAGAGATGGCAAATGATGAGCCATCAG...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCCTGATGGCTCATCATTaGCCATCTCTTCAAATCCAG +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSLMAHH*PSLQIQ
Trigger: CTGGATTTGAAGAGATGGCAAATGATGAGCCATCAG...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCAGCTGTAGCATCCTGTaGGACATAAGCTACCTGGCC +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGSCSIL*DISYLA
Trigger: GGCCAGGTAGCTTATGTCCAACAGGATGCTACAGCT...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATAGGCCTGGGCAAAAGTaGAAGGCACAGAGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYRPGQK*KAQSKQ
Trigger: CTGCTTACTCTGTGCCTTCAACTTTTGCCCAGGCCT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATTCAGCCTCATCAAATaGCTCCTTTGTGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPFSLIK*LLCGKM
Trigger: CATTTTCCCACAAAGGAGCAATTTGATGAGGCTGAA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATAAGTGCTGGTCCAGTTaGTCCTTTTCCCGGAAGGCC +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNKCWSS*SFSRKA
Trigger: GGCCTTCCGGGAAAAGGACAAACTGGACCAGCACTT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACATGCGGTCGGCTTTCTaGGCCTCCCTCTCAGGATTA +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDMRSAF*ASLSGL
Trigger: TAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCAT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGATGCGGTCGGCTTTCTaGGCCTCCCTCTCAGGATTA +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMMRSAF*ASLSGL
Trigger: TAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCAT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATATGTGCTGGACCATCTaGGTCTTGCTGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYMCWTI*VLLLYC
Trigger: GCAGTACAGCAGCAAGACCAAGATGGTCCAGCACAT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGGTGTGTGTATGGTGTaGGAGAGCTGGGCGAACTCT +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSGVCMV*ESWANS
Trigger: AGAGTTCGCCCAGCTCTCCAACACCATACACACACC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGTGTGTGTATGGTGTaGGAGAGCTGGGCGAACTCT +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGVCMV*ESWANS
Trigger: AGAGTTCGCCCAGCTCTCCAACACCATACACACACC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCAGTTCTGTCATTGCTaGGGTGAGCAGGTCCGTCGT +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSQFCHC*GEQVRR
Trigger: ACGACGGACCTGCTCACCCAAGCAATGACAGAACTG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCAGTTCTGTCATTGCTaGGGTGAGCAGGTCCGTCGT +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDQFCHC*GEQVRR
Trigger: ACGACGGACCTGCTCACCCAAGCAATGACAGAACTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATTCTCTGGTAATCCCCTaGTGGCGTTCGGTAGTCTGT +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYSLVIP*WRSVVC
Trigger: ACAGACTACCGAACGCCACAAGGGGATTACCAGAGA...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAGTGGCCGAGGCCACTaGAACCACTTGCAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSGRGH*NHLQLY
Trigger: ATACAGCTGCAAGTGGTTCAAGTGGCCTCGGCCACT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAGGCCTGGGCAAAAGTaGAAGGCACAGAGTAAGCAG +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDRPGQK*KAQSKQ
Trigger: CTGCTTACTCTGTGCCTTCAACTTTTGCCCAGGCCT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCATCCTCTTCCTCTTaGGCCTCCAGTCTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSSSSS*ASSLPR
Trigger: TCTAGGCAGACTGGAGGCCAAAGAGGAAGAGGATGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCATCCTCTTCCTCTTaGGCCTCCAGTCTGCCTAGA +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSSSSS*ASSLPR
Trigger: TCTAGGCAGACTGGAGGCCAAAGAGGAAGAGGATGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCGGGCCAATTCTTCTCTaGCTCTCGAAGAACTTTCCT +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGGPILL*LSKNFP
Trigger: AGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCCC...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAAGAATTGAGATGCTGTaGCAACTGCTCCGAGCTTAT +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTRIEML*QLLRAY
Trigger: ATAAGCTCGGAGCAGTTGCAACAGCATCTCAATTCT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGTCTTTTCGCTTAAATaGCTTCCCACAGGTGGAACA +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTVFSLK*LPTGGT
Trigger: TGTTCCACCTGTGGGAAGCAATTTAAGCGAAAAGAC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTTCAGAATGTGGGCTTaGCGCTTGCTGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGFRMWA*RLLALL
Trigger: TAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTGGACCATCTTGGTCTaGCTGCTGTACTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDWTILV*LLYCLE
Trigger: CTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCCA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATATGTGCTGGACCATCTaGGTCTTGCTGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNMCWTI*VLLLYC
Trigger: GCAGTACAGCAGCAAGACCAAGATGGTCCAGCACAT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGATGTGCTGGACCATCTaGGTCTTGCTGCTGTACTGC +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMMCWTI*VLLLYC
Trigger: GCAGTACAGCAGCAAGACCAAGATGGTCCAGCACAT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCTCTGGTAATCCCCTaGTGGCGTTCGGTAGTCTGT +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSLVIP*WRSVVC
Trigger: ACAGACTACCGAACGCCACAAGGGGATTACCAGAGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACTCTCTGGTAATCCCCTaGTGGCGTTCGGTAGTCTGT +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDSLVIP*WRSVVC
Trigger: ACAGACTACCGAACGCCACAAGGGGATTACCAGAGA...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTCTCTGGTAATCCCCTaGTGGCGTTCGGTAGTCTGT +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNSLVIP*WRSVVC
Trigger: ACAGACTACCGAACGCCACAAGGGGATTACCAGAGA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCCAGTAACCATGAACTaGGCACATCCTGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSPVTMN*AHPVST
Trigger: GGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp ACACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCTCCCTAAGTGTGAAGTaGACCGTCTTATTAAAAGGT +
Preference number: 5 (lower is better)
Translates to: TPTKCPFSFGAMAWNKKSSLSVK*TVLLKG
Trigger: ACCTTTTAATAAGACGGTCAACTTCACACTTAGGGA...GGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CACCCACAAAATGCCCCTTCTCCTTTGGTGCCATGGCTTGGAATAAGAAGTCCATCCCTAAGTGTGAAGTaGACCGTCTTATTAAAAGGT +
Preference number: 5 (lower is better)
Translates to: HPQNAPSPLVPWLGIRSPSLSVK*TVLLKG
Trigger: ACCTTTTAATAAGACGGTCAACTTCACACTTAGGGA...TGGACTTCTTATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATTTTGTGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCCAGTGTCAATGTGTCTaGAGAGAGGCCACAATATCC +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGQCQCV*REATIS
Trigger: GGATATTGTGGCCTCTCTCAAGACACATTGACACTG...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGGGCCAATTCTTCTCTaGCTCTCGAAGAACTTTCCT +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYGPILL*LSKNFP
Trigger: AGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCCC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTC +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMLLMKP*LQRSQV
Trigger: GACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTC +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDLLMKP*LQRSQV
Trigger: GACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTC +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNLLMKP*LQRSQV
Trigger: GACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATGGTGGAAGTCATGGTTaGGTGATATGCACTTCGCTG +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNGGSHG*VICTSL
Trigger: CAGCGAAGTGCATATCACCAAACCATGACTTCCACC...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTGGTGGAAGTCATGGTTaGGTGATATGCACTTCGCTG +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSGGSHG*VICTSL
Trigger: CAGCGAAGTGCATATCACCAAACCATGACTTCCACC...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTAATGCCCCTTCTCCTTaGGTGCCATGGCTTGGAATA +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSNAPSP*VPWLGI
Trigger: TATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAATGCCCCTTCTCCTTaGGTGCCATGGCTTGGAATA +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMNAPSP*VPWLGI
Trigger: TATTCCAAGCCATGGCACCAAAGGAGAAGGGGCATT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS TCA 90 bp CTTCCTCTGCCTCTTGTTCTGCTAAACACATCTAGTTTCTCATCATaGGAATTGAGATGCTGTTGCAACTGCTCCGAGCTTATAAATCGG +
Preference number: 5 (lower is better)
Translates to: LPLPLVLLNTSSFSS*ELRCCCNCSELINR
Trigger: CCGATTTATAAGCTCGGAGCAGTTGCAACAGCATCTCAATTCTCATGATGAGAAACTAGATGTGTTTAGCAGAACAAGAGGCAGAGGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGGGGCCAATTCTTCTCTaGCTCTCGAAGAACTTTCCT +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMGPILL*LSKNFP
Trigger: AGGAAAGTTCTTCGAGAGCAAGAGAAGAATTGGCCC...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AAATTCTCTCCACCTCGAAATCTACTTTCCCCTGAAAGATCTCTGTTCTGTGGCTTCAGCCTCATCAAATaGCTCCTTTGTGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: KFSPPRNLLSPERSLFCGFSLIK*LLCGKM
Trigger: CATTTTCCCACAAAGGAGCAATTTGATGAGGCTGAA...GCCACAGAACAGAGATCTTTCAGGGGAAAGTAGATTTCGAGGTGGAGAGAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGTCTTTTCGCTTAAATaGCTTCCCACAGGTGGAACA +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYVFSLK*LPTGGT
Trigger: TGTTCCACCTGTGGGAAGCAATTTAAGCGAAAAGAC...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAATGTGTTCCCGTAGTTaGTCTTTTCGCTTAAATTGC +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTMCSRS*SFRLNC
Trigger: GCAATTTAAGCGAAAAGACAAACTACGGGAACACAT...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATTTCAGAATGTGGGCTTaGCGCTTGCTGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNFRMWA*RLLALL
Trigger: TAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAA...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTTTCAGAATGTGGGCTTaGCGCTTGCTGGCACTTTTA +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSFRMWA*RLLALL
Trigger: TAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAA...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGTGTGTGTATGGTGTaGGAGAGCTGGGCGAACTCT +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGVCMV*ESWANS
Trigger: AGAGTTCGCCCAGCTCTCCAACACCATACACACACC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCTGATGGCTCATCATTaGCCATCTCTTCAAATCCAG +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYLMAHH*PSLQIQ
Trigger: CTGGATTTGAAGAGATGGCAAATGATGAGCCATCAG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGCAGTGTCAATGTGTCTaGAGAGAGGCCACAATATCC +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMQCQCV*REATIS
Trigger: GGATATTGTGGCCTCTCTCAAGACACATTGACACTG...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACCAGTGTCAATGTGTCTaGAGAGAGGCCACAATATCC +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDQCQCV*REATIS
Trigger: GGATATTGTGGCCTCTCTCAAGACACATTGACACTG...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTCAGTGTCAATGTGTCTaGAGAGAGGCCACAATATCC +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSQCQCV*REATIS
Trigger: GGATATTGTGGCCTCTCTCAAGACACATTGACACTG...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAAGTGGCCGAGGCCACTaGAACCACTTGCAGCTGTAT +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSGRGH*NHLQLY
Trigger: ATACAGCTGCAAGTGGTTCAAGTGGCCTCGGCCACT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGAGAATTGAGATGCTGTaGCAACTGCTCCGAGCTTAT +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMRIEML*QLLRAY
Trigger: ATAAGCTCGGAGCAGTTGCAACAGCATCTCAATTCT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACAGAATTGAGATGCTGTaGCAACTGCTCCGAGCTTAT +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDRIEML*QLLRAY
Trigger: ATAAGCTCGGAGCAGTTGCAACAGCATCTCAATTCT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATGGACCATCTTGGTCTaGCTGCTGTACTGCTTGGAG +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPWTILV*LLYCLE
Trigger: CTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCCA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATGAACACAGCAAAAACCGAGGGTTaGAAGAGTCAATTTGATAAA +
Preference number: 5 (lower is better)
Translates to: SPVTMNLAHPVSTFGMNTAKTEG*KSQFDK
Trigger: TTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGC...TGTGTTCATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACCAGTAACCATGAACTaGGCACATCCTGTCTCCACC +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPPVTMN*AHPVST
Trigger: GGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATACCCGAACCTGTGTTTaGCAATGCAGGGTCAATATT +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNTRTCV*QCRVNI
Trigger: AATATTGACCCTGCATTGCAAAACACAGGTTCGGGT...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACACCCGAACCTGTGTTTaGCAATGCAGGGTCAATATT +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDTRTCV*QCRVNI
Trigger: AATATTGACCCTGCATTGCAAAACACAGGTTCGGGT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGACCCGAACCTGTGTTTaGCAATGCAGGGTCAATATT +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMTRTCV*QCRVNI
Trigger: AATATTGACCCTGCATTGCAAAACACAGGTTCGGGT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTTCAGCCTCATCAAATaGCTCCTTTGTGGGAAAATG +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMFSLIK*LLCGKM
Trigger: CATTTTCCCACAAAGGAGCAATTTGATGAGGCTGAA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATATGTGTTCCCGTAGTTaGTCTTTTCGCTTAAATTGC +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYMCSRS*SFRLNC
Trigger: GCAATTTAAGCGAAAAGACAAACTACGGGAACACAT...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAGGTGGAAGTCATGGTTaGGTGATATGCACTTCGCTG +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPGGSHG*VICTSL
Trigger: CAGCGAAGTGCATATCACCAAACCATGACTTCCACC...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp AATAAGAAGTCCAGTAACCATGAACTTGGCACATCCTGTCTCCACCTTTGGTATCTTAGTACTCAAACATaGGGGAACAACTACATGAAC +
Preference number: 5 (lower is better)
Translates to: NKKSSNHELGTSCLHLWYLSTQT*GNNYMN
Trigger: GTTCATGTAGTTGTTCCCCAATGTTTGAGTACTAAG...ATACCAAAGGTGGAGACAGGATGTGCCAAGTTCATGGTTACTGGACTTCTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACATGTGTTCCCGTAGTTaGTCTTTTCGCTTAAATTGC +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDMCSRS*SFRLNC
Trigger: GCAATTTAAGCGAAAAGACAAACTACGGGAACACAT...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTACATCCAACCTACTCCAAAATACTCACACTGGACTGAATGAAGTCTACAGTATGTGTTCCCGTAGTTaGTCTTTTCGCTTAAATTGC +
Preference number: 5 (lower is better)
Translates to: STSNLLQNTHTGLNEVYSMCSRS*SFRLNC
Trigger: GCAATTTAAGCGAAAAGACAAACTACGGGAACACAT...ACTGTAGACTTCATTCAGTCCAGTGTGAGTATTTTGGAGTAGGTTGGATGTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGATGTGTTCCCGTAGTTaGTCTTTTCGCTTAAATTGC +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMMCSRS*SFRLNC
Trigger: GCAATTTAAGCGAAAAGACAAACTACGGGAACACAT...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCTTACAAAAGAGCTCTACGTGTCAGAGCTTTCAGACTTATGAGAACAGACATGTCCCTAAGTGTGAAGTaGACCGTCTTATTAAAAGGT +
Preference number: 5 (lower is better)
Translates to: SYKRALRVRAFRLMRTDMSLSVK*TVLLKG
Trigger: ACCTTTTAATAAGACGGTCAACTTCACACTTAGGGA...CATGTCTGTTCTCATAAGTCTGAAAGCTCTGACACGTAGAGCTCTTTTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TTAGGGAACCCGAACCTGTGTTTTGCAATGCAGGGTCAATATTTTCTGTTGAATCTTAGTACTCAAACATaGGGGAACAACTACATGAAC +
Preference number: 5 (lower is better)
Translates to: LGNPNLCFAMQGQYFLLNLSTQT*GNNYMN
Trigger: GTTCATGTAGTTGTTCCCCAATGTTTGAGTACTAAG...ATTCAACAGAAAATATTGACCCTGCATTGCAAAACACAGGTTCGGGTTCCCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS TCA 90 bp AAACCTTATCGCAATACTGACAAAAGTAATCACGATTGGGTTTTATaGTGGGTAGAGTTAACTCTGGCACCTCTTCTATCTTCATGTCTG +
Preference number: 5 (lower is better)
Translates to: KPYRNTDKSNHDWVL*WVELTLAPLLSSCL
Trigger: CAGACATGAAGATAGAAGAGGTGCCAGAGTTAACTCTACCCATCATAAAACCCAATCGTGATTACTTTTGTCAGTATTGCGATAAGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS-3UTR CAA 90 bp CTCTGTTCTGTGGCAAAAACCGAGGGTTTGAAGAGTCAATTTGATAAAGATGACGCAAAAACCGAGGGTTaGAAGAGTCAATTTGATAAA +
Preference number: 5 (lower is better)
Translates to: LCSVAKTEGLKSQFDKDDAKTEG*KSQFDK
Trigger: TTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGC...GTCATCTTTATCAAATTGACTCTTCAAACCCTCGGTTTTTGCCACAGAACAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCAACCCGAACCTGTGTTTaGCAATGCAGGGTCAATATT +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPTRTCV*QCRVNI
Trigger: AATATTGACCCTGCATTGCAAAACACAGGTTCGGGT...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCATCCCTAAGTGTGAAGTaGACCGTCTTATTAAAAGGT +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPSLSVK*TVLLKG
Trigger: ACCTTTTAATAAGACGGTCAACTTCACACTTAGGGA...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS-3UTR CAA 90 bp TCAATAGTTTTGGAAATTTTTCTTGGTACCAATATCTCCTTCTTACCACCACCACTTAGTACTCAAACATaGGGGAACAACTACATGAAC +
Preference number: 5 (lower is better)
Translates to: SIVLEIFLGTNISFLPPPLSTQT*GNNYMN
Trigger: GTTCATGTAGTTGTTCCCCAATGTTTGAGTACTAAG...TGGTGGTGGTAAGAAGGAGATATTGGTACCAAGAAAAATTTCCAAAACTATTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS GCA 72 bp CTGGCCCGGGTGAGCACCGGCCGGTTGGGGATCGGGTaGAAGGGGCCGTGCTTCGGACACACTGAAGCATGC +
Preference number: 6 (lower is better)
Translates to: LARVSTGRLGIG*KGPCFGHTEAC
Trigger: GCATGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCGGCCGGTGCTCACCCGGGCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp CCACAAGTCGTGTGGGTCGAAGGGCCGGGGCGGGTCTaGCTCCCAGTCATCCAGATCCGTGTCCTCACCGTC +
Preference number: 6 (lower is better)
Translates to: PQVVWVEGPGRV*LPVIQIRVLTV
Trigger: GACGGTGAGGACACGGATCTGGATGACTGGGAGCCAGACCCGCCCCGGCCCTTCGACCCACACGACTTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp CGATGGTGCCCGTCAGCTGGGTGTGTGTGCTCAGCATaGGGTCTGGCTCTCCAGGACCAGCGGGTCGGAGCT +
Preference number: 6 (lower is better)
Translates to: RWCPSAGCVCSA*GLALQDQRVGA
Trigger: AGCTCCGACCCGCTGGTCCTGGAGAGCCAGACCCCATGCTGAGCACACACACCCAGCTGACGGGCACCATCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp CAGCAGACGGGAGGGGTGGCGATGGTGCCCGTCAGCTaGGTGTGTGTGCTCAGCATGGGGTCTGGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: QQTGGVAMVPVS*VCVLSMGSGSP
Trigger: TGGAGAGCCAGACCCCATGCTGAGCACACACACCCAGCTGACGGGCACCATCGCCACCCCTCCCGTCTGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp TGGAGCAGTGGGGACAGCAGACGGGAGGGGTGGCGATaGTGCCCGTCAGCTGGGTGTGTGTGCTCAGCATGG +
Preference number: 6 (lower is better)
Translates to: WSSGDSRREGWR*CPSAGCVCSAW
Trigger: CCATGCTGAGCACACACACCCAGCTGACGGGCACCATCGCCACCCCTCCCGTCTGCTGTCCCCACTGCTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp TGCGCTTGGCTCTGCGCATGTCGTCGGCTGTCAGCGTaGTCTGGGTGGGCACCACGCTCTCTTCATGCTGCG +
Preference number: 6 (lower is better)
Translates to: CAWLCACRRLSA*SGWAPRSLHAA
Trigger: CGCAGCATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp CTCTGCGCATGTCGTCGGCTGTCAGCGTGCTCTGGGTaGGCACCACGCTCTCTTCATGCTGCGGCTGCAGGT +
Preference number: 6 (lower is better)
Translates to: LCACRRLSACSG*APRSLHAAAAG
Trigger: ACCTGCAGCCGCAGCATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp TTGGCTCTGCGCATGTCGTCGGCTGTCAGCGTGCTCTaGGTGGGCACCACGCTCTCTTCATGCTGCGGCTGC +
Preference number: 6 (lower is better)
Translates to: LALRMSSAVSVL*VGTTLSSCCGC
Trigger: GCAGCCGCAGCATGAAGAGAGCGTGGTGCCCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 72 bp GGACGCCCCGGCCGTCGACCTGGACCGAATCGCCTCTaGCCTCGTCCCCTTCCTCTGCCTCTTGTTCTGCTA +
Preference number: 6 (lower is better)
Translates to: GRPGRRPGPNRL*PRPLPLPLVLL
Trigger: TAGCAGAACAAGAGGCAGAGGAAGGGGACGAGGCAAGAGGCGATTCGGTCCAGGTCGACGGCCGGGGCGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp AGCACCGGCCGGTTGGGGATCGGGTGCAAGGGGCCGTaGTTCGGACACACTGAAGCATGCGCGTTATTGCAC +
Preference number: 6 (lower is better)
Translates to: STGRLGIGCKGP*FGHTEACALLH
Trigger: GTGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCCGATCCCCAACCGGCCGGTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GGCAGGTACGTGTGCTGCACAGAGGAATTCTGCTGCTaGTGCTGCTGCTGCTGCAGAGCCTGCCCCTGTGTG +
Preference number: 6 (lower is better)
Translates to: GRYVCCTEEFCC*CCCCCRACPCV
Trigger: CACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp CTGCATTCTGCAGCTCCAATCGGATGCGCTTGGCTCTaGGCATGTCGTCGGCTGTCAGCGTGCTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: LHSAAPIGCAWL*ACRRLSACSGW
Trigger: CCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCATCCGATTGGAGCTGCAGAATGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000423662.6
ENST00000526082.5
CDS GCA 72 bp GATGCTGAAGAGCTGCATTTCGGATGCGCTTGGCTCTaGGCATGTCGTCGGCTGTCAGCGTGCTCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: DAEELHFGCAWL*ACRRLSACSGW
Trigger: CCACCCAGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCATCCGAAATGCAGCTCTTCAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000360871.8
ENST00000528746.5
CDS GCA 72 bp AGCGGGTCGGAGCTTCCGAATGCTCGGTGGGAGCTCTaGTCCTGGGTGGTTCTTCAGAATGTGGGCTTTGCG +
Preference number: 6 (lower is better)
Translates to: SGSELPNARWEL*SWVVLQNVGFA
Trigger: CGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGACCCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GAATTCTGCTGCTGCTGCTGCTGCTGCTGCAGAGCCTaGCCCTGTGTGGAAGAACTGCCCTGGATGTGGGAG +
Preference number: 6 (lower is better)
Translates to: EFCCCCCCCCRA*PCVEELPWMWE
Trigger: CTCCCACATCCAGGGCAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp TGCTGCACAGAGGAATTCTGCTGCTGCTGCTGCTGCTaGTGCAGAGCCTGCCCCTGTGTGGAAGAACTGCCC +
Preference number: 6 (lower is better)
Translates to: CCTEEFCCCCCC*CRACPCVEELP
Trigger: GGGCAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp GGGCAGTTCCCCTCCCGCCCATGGAAGCGTAAGTGCTaGTCCAGTTTGTCCTTTTCCCGGAAGGCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: GQFPSRPWKRKC*SSLSFSRKAFP
Trigger: TGGGAAGGCCTTCCGGGAAAAGGACAAACTGGACCAGCACTTACGCTTCCATGGGCGGGAGGGGAACTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp TCCAGGACCAGCGGGTCGGAGCTTCCGAATGCTCGGTaGGAGCTCTGCTCCTGGGTGGTTCTTCAGAATGTG +
Preference number: 6 (lower is better)
Translates to: SRTSGSELPNAR*ELCSWVVLQNV
Trigger: CACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGACCCGCTGGTCCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp AGGGCTGAGGATCATGGAGCTGGCCAACATCCACAGTaGACTGCTGTGACTGGTGAGGGGAAGTGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: RAEDHGAGQHPQ*TAVTGEGKWPR
Trigger: CCTCGGCCACTTCCCCTCACCAGTCACAGCAGTCCACTGTGGATGTTGGCCAGCTCCATGATCCTCAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS TCA 72 bp GGGGATCGGGTGCAAGGGGCCGTGCTTCGGACACACTaGAGCATGCGCGTTATTGCACTCCTCACACCACAA +
Preference number: 6 (lower is better)
Translates to: GDRVQGAVLRTH*SMRVIALLTPQ
Trigger: TTGTGGTGTGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCCGATCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GTAAGCAGACATGGACACCTGCTTTTGGTTCGCTGGTaGCTGCTGGCACAAACAGGGCGCAAGGGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: VSRHGHLLLVRW*LLAQTGRKGWL
Trigger: CAGCCAGCCCTTGCGCCCTGTTTGTGCCAGCAGGCACCAGCGAACCAAAAGCAGGTGTCCATGTCTGCTTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS GCA 72 bp GTGTGCTGCACAGAGGAATTCTGCTGCTGCTGCTGCTaGTGCTGCAGAGCCTGCCCCTGTGTGGAAGAACTG +
Preference number: 6 (lower is better)
Translates to: VCCTEEFCCCCC*CCRACPCVEEL
Trigger: CAGTTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp AGGTACGTGTGCTGCACAGAGGAATTCTGCTGCTGCTaGTGCTGCTGCTGCAGAGCCTGCCCCTGTGTGGAA +
Preference number: 6 (lower is better)
Translates to: RYVCCTEEFCCC*CCCCRACPCVE
Trigger: TTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GATGCTGAAGAGCTGCATTCTGCAGCTCCAATCGGATaGGCTTGGCTCTGCGCATGTCGTCGGCTGTCAGCG +
Preference number: 6 (lower is better)
Translates to: DAEELHSAAPIG*AWLCACRRLSA
Trigger: CGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCATCCGATTGGAGCTGCAGAATGCAGCTCTTCAGCATC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000423662.6
ENST00000526082.5
CDS CCA 72 bp GAAGAGCTGCATTCTGCAGCTCCAATCGGATGCGCTTaGCTCTGCGCATGTCGTCGGCTGTCAGCGTGCTCT +
Preference number: 6 (lower is better)
Translates to: EELHSAAPIGCA*LCACRRLSACS
Trigger: AGAGCACGCTGACAGCCGACGACATGCGCAGAGCCAAGCGCATCCGATTGGAGCTGCAGAATGCAGCTCTTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358825.9
ENST00000423662.6
ENST00000526082.5
CDS CAA 90 bp CCTCTTCCTCTTTGGCCTCCAGTCTGCCTAGAGGGGTCTGCAGAGTaGCCAAAGGGTCGGACCCATCTACACTCTCGATGGAAGGCAGCA +
Preference number: 6 (lower is better)
Translates to: PLPLWPPVCLEGSAE*PKGRTHLHSRWKAA
Trigger: TGCTGCCTTCCATCGAGAGTGTAGATGGGTCCGACCCTTTGGCAACTCTGCAGACCCCTCTAGGCAGACTGGAGGCCAAAGAGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000527581.5
CDS CAA 90 bp ATGCGGGGCTTGAACGTCTTGGAGCGGCTGATGCGGTCGGCTTTCTaGGCCTCCCTCTCAGGATTATGCATCCTCTGCATGTGTTCCCGT +
Preference number: 6 (lower is better)
Translates to: MRGLNVLERLMRSAF*ASLSGLCILCMCSR
Trigger: ACGGGAACACATGCAGAGGATGCATAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCATCAGCCGCTCCAAGACGTTCAAGCCCCGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GGCCGTGCTTCGGACACACTGAAGCATGCGCGTTATTaGACTCCTCACACCACAAGTCGTGTGGGTCGAAGG +
Preference number: 6 (lower is better)
Translates to: GRASDTLKHARY*TPHTTSRVGRR
Trigger: CCTTCGACCCACACGACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GGGTGCAAGGGGCCGTGCTTCGGACACACTGAAGCATaGGCGTTATTGCACTCCTCACACCACAAGTCGTGT +
Preference number: 6 (lower is better)
Translates to: GCKGPCFGHTEA*ALLHSSHHKSC
Trigger: ACACGACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCCCCTTGCACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp CCACAGGTGGAACACAGGAAGTCTTTGCGGTCCGAATaGCGGAGCATGTGGAGTCGCAGTTTATCGGGGCGA +
Preference number: 6 (lower is better)
Translates to: PQVEHRKSLRSE*RSMWSRSLSGR
Trigger: TCGCCCCGATAAACTGCGACTCCACATGCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTTCCACCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp TACGTGTGCTGCACAGAGGAATTCTGCTGCTGCTGCTaGTGCTGCTGCAGAGCCTGCCCCTGTGTGGAAGAA +
Preference number: 6 (lower is better)
Translates to: YVCCTEEFCCCC*CCCRACPCVEE
Trigger: TTCTTCCACACAGGGGCAGGCTCTGCAGCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp CGGAAGGAATTCCAAGCACTGGGCAGGTACGTGTGCTaGACAGAGGAATTCTGCTGCTGCTGCTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: RKEFQALGRYVC*TEEFCCCCCCC
Trigger: GCAGCAGCAGCAGCAGCAGCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAGTGCTTGGAATTCCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp CCGTTGGTGGTGGTGGTGATGATGTACTGTGTGGTCTaGTGTTGGCTGTTGGTCTGGGGGTCCAGGGAGTCA +
Preference number: 6 (lower is better)
Translates to: PLVVVVMMYCVV*CWLLVWGSRES
Trigger: TGACTCCCTGGACCCCCAGACCAACAGCCAACAGCAGACCACACAGTACATCATCACCACCACCACCAACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp AGAGTAAGCAGACATGGACACCTGCTTTTGGTTCGCTaGTGCCTGCTGGCACAAACAGGGCGCAAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: RVSRHGHLLLVR*CLLAQTGRKGW
Trigger: CCAGCCCTTGCGCCCTGTTTGTGCCAGCAGGCACCAGCGAACCAAAAGCAGGTGTCCATGTCTGCTTACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS CCA 72 bp CACAGGAAGTCTTTGCGGTCCGAATGCCGGAGCATGTaGAGTCGCAGTTTATCGGGGCGACAGAAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: HRKSLRSECRSM*SRSLSGRQKAL
Trigger: CAAGGCCTTCTGTCGCCCCGATAAACTGCGACTCCACATGCTCCGGCATTCGGACCGCAAAGACTTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp AGCTTCCGAATGCTCGGTGGGAGCTCTGCTCCTGGGTaGTTCTTCAGAATGTGGGCTTTGCGCTTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: SFRMLGGSSAPG*FFRMWALRLLA
Trigger: TGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp TCGGAGCTTCCGAATGCTCGGTGGGAGCTCTGCTCCTaGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTGCT +
Preference number: 6 (lower is better)
Translates to: SELPNARWELCS*VVLQNVGFALA
Trigger: AGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCAGAGCTCCCACCGAGCATTCGGAAGCTCCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp GGGTCCAGGGAGTCACTGTGTGCAGGTGGCTCGACCTaGACTCCACCAGAGAGGGCAGAAGTTTGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: GSRESLCAGGST*TPPERAEVCFS
Trigger: AGAAAAGCAAACTTCTGCCCTCTCTGGTGGAGTCCAGGTCGAGCCACCTGCACACAGTGACTCCCTGGACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp ATGATGTACTGTGTGGTCTGCTGTTGGCTGTTGGTCTaGGGGTCCAGGGAGTCACTGTGTGCAGGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: MMYCVVCCWLLV*GSRESLCAGGS
Trigger: CGAGCCACCTGCACACAGTGACTCCCTGGACCCCCAGACCAACAGCCAACAGCAGACCACACAGTACATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp GTAGGAGGCACCATCTGCCGTGTACACCACCTGCTGTaGGGGGCGAACCTGGTCATCGGTATAGACAATCTG +
Preference number: 6 (lower is better)
Translates to: VGGTICRVHHLL*GANLVIGIDNL
Trigger: CAGATTGTCTATACCGATGACCAGGTTCGCCCCCCACAGCAGGTGGTGTACACGGCAGATGGTGCCTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS CAA 72 bp CTTTGGCCTCCAGTCTGCCTAGAGGGGTCTGCAGAGTaGCCAAAGGGTCGGACCCATCTACACTCTCGATGG +
Preference number: 6 (lower is better)
Translates to: LWPPVCLEGSAE*PKGRTHLHSRW
Trigger: CCATCGAGAGTGTAGATGGGTCCGACCCTTTGGCAACTCTGCAGACCCCTCTAGGCAGACTGGAGGCCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000527581.5
CDS CAA 72 bp GGGCCGTGCTTCGGACACACTGAAGCATGCGCGTTATaGCACTCCTCACACCACAAGTCGTGTGGGTCGAAG +
Preference number: 6 (lower is better)
Translates to: GPCFGHTEACAL*HSSHHKSCGSK
Trigger: CTTCGACCCACACGACTTGTGGTGTGAGGAGTGCAATAACGCGCATGCTTCAGTGTGTCCGAAGCACGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 90 bp TGGAGCTTCATGTGGCTCTCCAAGGATGTGCTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTCAGTGGGCAGTTCCCCTCCCGCCCA +
Preference number: 6 (lower is better)
Translates to: WSFMWLSKDVLLMKP*LQRSQVSGQFPSRP
Trigger: TGGGCGGGAGGGGAACTGCCCACTGACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAGCACATCCTTGGAGAGCCACATGAAGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS TCA 72 bp GTGGATGTACACCAGCGTGTGCTCTGGACCATCCACTaGTGTGTAGGAGGCACCATCTGCCGTGTACACCAC +
Preference number: 6 (lower is better)
Translates to: VDVHQRVLWTIH*CVGGTICRVHH
Trigger: GTGGTGTACACGGCAGATGGTGCCTCCTACACATCAGTGGATGGTCCAGAGCACACGCTGGTGTACATCCAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS TCA 72 bp CCATCTACACTCTCGATGGAAGGCAGCACCTGGTTATaGACTGGCAATGAGGCCTGTGCAGCTTCCACCGGG +
Preference number: 6 (lower is better)
Translates to: PSTLSMEGSTWL*TGNEACAASTG
Trigger: CCCGGTGGAAGCTGCACAGGCCTCATTGCCAGTTCATAACCAGGTGCTGCCTTCCATCGAGAGTGTAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527581.5
CDS CCA 72 bp AGTCTCTCCAGTGGCGCTGTCTGTAGTCAAAACCGCTaGGGTGGCACTGATCACAGCTGTCGTCAGTGGTGT +
Preference number: 6 (lower is better)
Translates to: SLSSGAVCSQNR*GGTDHSCRQWC
Trigger: ACACCACTGACGACAGCTGTGATCAGTGCCACCCCAGCGGTTTTGACTACAGACAGCGCCACTGGAGAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp GGGTCTGTAAACAGAGTCTGTGCAGCTTCCACCGGGTaGATGTACACCAGCGTGTGCTCTGGACCATCCACT +
Preference number: 6 (lower is better)
Translates to: GSVNRVCAASTG*MYTSVCSGPST
Trigger: AGTGGATGGTCCAGAGCACACGCTGGTGTACATCCACCCGGTGGAAGCTGCACAGACTCTGTTTACAGACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000528746.5
ENST00000531431.1
CDS CAA 90 bp GGGGTGGCACTGATCACAGCTGTCGTCAGTGGTGTGTGTATGGTGTaGGAGAGCTGGGCGAACTCTGGATGCTTCTTTCGAATGTGCTGG +
Preference number: 6 (lower is better)
Translates to: GVALITAVVSGVCMV*ESWANSGCFFRMCW
Trigger: CCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCATACACACACCACTGACGACAGCTGTGATCAGTGCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 90 bp CATGAGGTGGGTGCTGGATTCAAGCTCCAGGGTGGAAGTCATGGTTaGGTGATATGCACTTCGCTGCTTCCGTTCCCGTTGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: HEVGAGFKLQGGSHG*VICTSLLPFPLVVV
Trigger: CACCACCACCAACGGGAACGGAAGCAGCGAAGTGCATATCACCAAACCATGACTTCCACCCTGGAGCTTGAATCCAGCACCCACCTCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS TCA 72 bp TCGTTAAGGTCTGGGACAGTTCTGTCATTGCTTGGGTaGGCAGGTCCGTCGTCACCACAGTCTCTCCAGTGG +
Preference number: 6 (lower is better)
Translates to: SLRSGTVLSLLG*AGPSSPQSLQW
Trigger: CCACTGGAGAGACTGTGGTGACGACGGACCTGCTCACCCAAGCAATGACAGAACTGTCCCAGACCTTAACGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp CTGTGGCAGCTGAGGGATTGGGATAGTGGTCTGTTCTaGTTGATCCAGCCCATTCAGAGTGGCTGGTTCAGC +
Preference number: 6 (lower is better)
Translates to: LWQLRDWDSGLF*LIQPIQSGWFS
Trigger: GCTGAACCAGCCACTCTGAATGGGCTGGATCAACCAGAACAGACCACTATCCCAATCCCTCAGCTGCCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp GGTGGGTGCTGGATTCAAGCTCCAGGGTGGAAGTCATaGTTTGGTGATATGCACTTCGCTGCTTCCGTTCCC +
Preference number: 6 (lower is better)
Translates to: GGCWIQAPGWKS*FGDMHFAASVP
Trigger: GGGAACGGAAGCAGCGAAGTGCATATCACCAAACCATGACTTCCACCCTGGAGCTTGAATCCAGCACCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS CAA 72 bp TGGCAGCTGAGGGATTGGGATAGTGGTCTGTTCTGGTaGATCCAGCCCATTCAGAGTGGCTGGTTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: WQLRDWDSGLFW*IQPIQSGWFSL
Trigger: GAGGCTGAACCAGCCACTCTGAATGGGCTGGATCAACCAGAACAGACCACTATCCCAATCCCTCAGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 72 bp TTGAACGTCTTGGAGCGGCTGATGCGGTCGGCTTTCTaGGCCTCCCTCTCAGGATTATGCATCCTCTGCATG +
Preference number: 6 (lower is better)
Translates to: LNVLERLMRSAF*ASLSGLCILCM
Trigger: CATGCAGAGGATGCATAATCCTGAGAGGGAGGCCAAGAAAGCCGACCGCATCAGCCGCTCCAAGACGTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS TCA 72 bp CTGGATTCAAGCTCCAGGGTGGAAGTCATGGTTTGGTaGTATGCACTTCGCTGCTTCCGTTCCCGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: LDSSSRVEVMVW*YALRCFRSRWW
Trigger: CCACCAACGGGAACGGAAGCAGCGAAGTGCATATCACCAAACCATGACTTCCACCCTGGAGCTTGAATCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS TCA 72 bp ACCGGCTGTGAGGAAGAGCTGGCTTCATTTTTGATCTaGCTGCTCACAGCCTTTAAGCCTCTGCCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: TGCEEELASFLI*LLTAFKPLPSL
Trigger: GAGGGAGGGCAGAGGCTTAAAGGCTGTGAGCAGTCAGATCAAAAATGAAGCCAGCTCTTCCTCACAGCCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423662.6
CDS GCA 72 bp TTCAAGCTCCAGGGTGGAAGTCATGGTTTGGTGATATaGACTTCGCTGCTTCCGTTCCCGTTGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: FKLQGGSHGLVI*TSLLPFPLVVV
Trigger: CACCACCACCAACGGGAACGGAAGCAGCGAAGTGCATATCACCAAACCATGACTTCCACCCTGGAGCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp TCCGGAACAAAGTGCACCTGTGCGGCATTCTGTTCATaGTCTGCAGATGTCGGCCACACATGCGAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: SGTKCTCAAFCS*SADVGHTCELS
Trigger: TGAAAGCTCGCATGTGTGGCCGACATCTGCAGAGCATGAACAGAATGCCGCACAGGTGCACTTTGTTCCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS CCA 72 bp CAGGGAAGACTGGGTTTCCTGTGGCAGCTGAGGGATTaGGATAGTGGTCTGTTCTGGTTGATCCAGCCCATT +
Preference number: 6 (lower is better)
Translates to: QGRLGFLWQLRD*DSGLFWLIQPI
Trigger: AATGGGCTGGATCAACCAGAACAGACCACTATCCCAATCCCTCAGCTGCCACAGGAAACCCAGTCTTCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp GCTGTCGTCAGTGGTGTGTGTATGGTGTTGGAGAGCTaGGCGAACTCTGGATGCTTCTTTCGAATGTGCTGG +
Preference number: 6 (lower is better)
Translates to: AVVSGVCMVLES*ANSGCFFRMCW
Trigger: CCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCATACACACACCACTGACGACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp TCTGTCGTTAAGGTCTGGGACAGTTCTGTCATTGCTTaGGTGAGCAGGTCCGTCGTCACCACAGTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: SVVKVWDSSVIA*VSRSVVTTVSP
Trigger: TGGAGAGACTGTGGTGACGACGGACCTGCTCACCCAAGCAATGACAGAACTGTCCCAGACCTTAACGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 72 bp ATGTGGCTCTCCAAGGATGTGCTGCTGATGAAGCCCTaGTTACAGAGATCACAGGTCAGTGGGCAGTTCCCC +
Preference number: 6 (lower is better)
Translates to: MWLSKDVLLMKP*LQRSQVSGQFP
Trigger: GGGGAACTGCCCACTGACCTGTGATCTCTGTAACAAGGGCTTCATCAGCAGCACATCCTTGGAGAGCCACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 72 bp GGTGCTGGATTCAAGCTCCAGGGTGGAAGTCATGGTTaGGTGATATGCACTTCGCTGCTTCCGTTCCCGTTG +
Preference number: 6 (lower is better)
Translates to: GAGFKLQGGSHG*VICTSLLPFPL
Trigger: CAACGGGAACGGAAGCAGCGAAGTGCATATCACCAAACCATGACTTCCACCCTGGAGCTTGAATCCAGCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000528746.5
CDS TCA 72 bp AGTCTTCCTACCAACTCCTTCCAGGCCCTGGAAAAATaGCTTCCATCTACCGGCTGTGAGGAAGAGCTGGCT +
Preference number: 6 (lower is better)
Translates to: SLPTNSFQALEK*LPSTGCEEELA
Trigger: AGCCAGCTCTTCCTCACAGCCGGTAGATGGAAGTCATTTTTCCAGGGCCTGGAAGGAGTTGGTAGGAAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304538.10
ENST00000423662.6
CDS TCA 72 bp CCATCTACACTCTCGATGGAAGGCAGCACCTGGTTATaGACTGGCAATGAGGCCTGGGCAAAAGTTGAAGGC +
Preference number: 6 (lower is better)
Translates to: PSTLSMEGSTWL*TGNEAWAKVEG
Trigger: GCCTTCAACTTTTGCCCAGGCCTCATTGCCAGTTCATAACCAGGTGCTGCCTTCCATCGAGAGTGTAGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000423662.6
ENST00000526082.5
CDS GCA 72 bp GAGAGCTGGGCGAACTCTGGATGCTTCTTTCGAATGTaGTGGACCATCTTGGTCTTGCTGCTGTACTGCTTG +
Preference number: 6 (lower is better)
Translates to: ESWANSGCFFRM*WTILVLLLYCL
Trigger: CAAGCAGTACAGCAGCAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp AGTAACCGCCTTCACCTGGCCAGTAGTAACTGGAGTTaGCACACCACTGTCTGTAATCACAAACTGACCCGG +
Preference number: 6 (lower is better)
Translates to: SNRLHLASSNWS*HTTVCNHKLTR
Trigger: CCGGGTCAGTTTGTGATTACAGACAGTGGTGTGGCAACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp GTAAGCCACCAGGTTCTGCTCCAGGTGATTCTGGGCTaGCCGTACAAACATCATCCAGTTACAAAGCGTCTC +
Preference number: 6 (lower is better)
Translates to: VSHQVLLQVILG*PYKHHPVTKRL
Trigger: GAGACGCTTTGTAACTGGATGATGTTTGTACGGCCAGCCCAGAATCACCTGGAGCAGAACCTGGTGGCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp TTCTGGTTCATGTTCCAGGGAAGACTGGGTTTCCTGTaGCAGCTGAGGGATTGGGATAGTGGTCTGTTCTGG +
Preference number: 6 (lower is better)
Translates to: FWFMFQGRLGFL*QLRDWDSGLFW
Trigger: CCAGAACAGACCACTATCCCAATCCCTCAGCTGCCACAGGAAACCCAGTCTTCCCTGGAACATGAACCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp AGCTGGGCGAACTCTGGATGCTTCTTTCGAATGTGCTaGACCATCTTGGTCTTGCTGCTGTACTGCTTGGAG +
Preference number: 6 (lower is better)
Translates to: SWANSGCFFRMC*TILVLLLYCLE
Trigger: CTCCAAGCAGTACAGCAGCAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 72 bp CTGATCACAGCTGTCGTCAGTGGTGTGTGTATGGTGTaGGAGAGCTGGGCGAACTCTGGATGCTTCTTTCGA +
Preference number: 6 (lower is better)
Translates to: LITAVVSGVCMV*ESWANSGCFFR
Trigger: TCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCATACACACACCACTGACGACAGCTGTGATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 90 bp GGTTTCCTGTGGCAGCTGAGGGATTGGGATAGTGGTCTGTTCTGGTaGATCCAGCCCATTCAGAGTGGCTGGTTCAGCCTCATCAAATTG +
Preference number: 6 (lower is better)
Translates to: GFLWQLRDWDSGLFW*IQPIQSGWFSLIKL
Trigger: CAATTTGATGAGGCTGAACCAGCCACTCTGAATGGGCTGGATCAACCAGAACAGACCACTATCCCAATCCCTCAGCTGCCACAGGAAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 90 bp TCTTTTCGCTTAAATTGCTTCCCACAGGTGGAACACAGGAAGTCTTaGCGGTCCGAATGCCGGAGCATGTGGAGTCGCAGTTTATCGGGG +
Preference number: 6 (lower is better)
Translates to: SFRLNCFPQVEHRKS*RSECRSMWSRSLSG
Trigger: CCCCGATAAACTGCGACTCCACATGCTCCGGCATTCGGACCGCAAAGACTTCCTGTGTTCCACCTGTGGGAAGCAATTTAAGCGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 90 bp TGTTCATGCTCTGCAGATGTCGGCCACACATGCGAGCTTTCATCTTaGGAATCCATCTTCTCCCAACTGGACAGCTCCACGTCTGGCACA +
Preference number: 6 (lower is better)
Translates to: CSCSADVGHTCELSS*ESIFSQLDSSTSGT
Trigger: TGTGCCAGACGTGGAGCTGTCCAGTTGGGAGAAGATGGATTCCAAAGATGAAAGCTCGCATGTGTGGCCGACATCTGCAGAGCATGAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS CAA 90 bp AAGGCAGCACCTGGTTATGAACTGGCAATGAGGCCTGGGCAAAAGTaGAAGGCACAGAGTAAGCAGACATGGACACCTGCTTTTGGTTCG +
Preference number: 6 (lower is better)
Translates to: KAAPGYELAMRPGQK*KAQSKQTWTPAFGS
Trigger: CGAACCAAAAGCAGGTGTCCATGTCTGCTTACTCTGTGCCTTCAACTTTTGCCCAGGCCTCATTGCCAGTTCATAACCAGGTGCTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000423662.6
ENST00000526082.5
CDS GCA 72 bp GTGTGTATGGTGTTGGAGAGCTGGGCGAACTCTGGATaGTTCTTTCGAATGTGCTGGACCATCTTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: VCMVLESWANSG*FFRMCWTILVL
Trigger: CAAGACCAAGATGGTCCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCATACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp TGGTGTGTGTATGGTGTTGGAGAGCTGGGCGAACTCTaGATGCTTCTTTCGAATGTGCTGGACCATCTTGGT +
Preference number: 6 (lower is better)
Translates to: WCVYGVGELGEL*MLLSNVLDHLG
Trigger: ACCAAGATGGTCCAGCACATTCGAAAGAAGCATCCAGAGTTCGCCCAGCTCTCCAACACCATACACACACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp TCTCAGATGAATAGCCACGGAAGGAATTCCAAGCACTaGGCAGGTACGTGTGCTGCACAGAGGAATTCTGCT +
Preference number: 6 (lower is better)
Translates to: SQMNSHGRNSKH*AGTCAAQRNSA
Trigger: AGCAGAATTCCTCTGTGCAGCACACGTACCTGCCCAGTGCTTGGAATTCCTTCCGTGGCTATTCATCTGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp ACCCGAAGTAACCGCCTTCACCTGGCCAGTAGTAACTaGAGTTGCCACACCACTGTCTGTAATCACAAACTG +
Preference number: 6 (lower is better)
Translates to: TRSNRLHLASSN*SCHTTVCNHKL
Trigger: CAGTTTGTGATTACAGACAGTGGTGTGGCAACTCCAGTTACTACTGGCCAGGTGAAGGCGGTTACTTCGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CAA 72 bp CCTGGTTATGAACTGGCAATGAGGCCTGGGCAAAAGTaGAAGGCACAGAGTAAGCAGACATGGACACCTGCT +
Preference number: 6 (lower is better)
Translates to: PGYELAMRPGQK*KAQSKQTWTPA
Trigger: AGCAGGTGTCCATGTCTGCTTACTCTGTGCCTTCAACTTTTGCCCAGGCCTCATTGCCAGTTCATAACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304538.10
ENST00000423662.6
ENST00000526082.5
CDS GCA 72 bp AACAAAGTGCACCTGTGCGGCATTCTGTTCATGCTCTaGAGATGTCGGCCACACATGCGAGCTTTCATCTTT +
Preference number: 6 (lower is better)
Translates to: NKVHLCGILFML*RCRPHMRAFIF
Trigger: AAAGATGAAAGCTCGCATGTGTGGCCGACATCTGCAGAGCATGAACAGAATGCCGCACAGGTGCACTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS CAA 90 bp CCAGCCCATTCAGAGTGGCTGGTTCAGCCTCATCAAATTGCTCCTTaGTGGGAAAATGTAGCAAGTCCTGTGTCCCATCGTCACTCTTTT +
Preference number: 6 (lower is better)
Translates to: PAHSEWLVQPHQIAP*WENVASPVSHRHSF
Trigger: AAAAGAGTGACGATGGGACACAGGACTTGCTACATTTTCCCACAAAGGAGCAATTTGATGAGGCTGAACCAGCCACTCTGAATGGGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GCTCTGCTCCTGGGTGGTTCTTCAGAATGTGGGCTTTaGGCTTGCTGGCACTTTTATAAACCTTATCGCAAT +
Preference number: 6 (lower is better)
Translates to: ALLLGGSSECGL*ACWHFYKPYRN
Trigger: ATTGCGATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GCATTCTGTTCATGCTCTGCAGATGTCGGCCACACATaGGAGCTTTCATCTTTGGAATCCATCTTCTCCCAA +
Preference number: 6 (lower is better)
Translates to: AFCSCSADVGHT*ELSSLESIFSQ
Trigger: TTGGGAGAAGATGGATTCCAAAGATGAAAGCTCGCATGTGTGGCCGACATCTGCAGAGCATGAACAGAATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358825.9
ENST00000360871.8
ENST00000527581.5
ENST00000528746.5
ENST00000531431.1
CDS GCA 72 bp CTCCTGGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTaGTGGCACTTTTATAAACCTTATCGCAATACTGAC +
Preference number: 6 (lower is better)
Translates to: LLGGSSECGLCA*WHFYKPYRNTD
Trigger: GTCAGTATTGCGATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS GCA 72 bp GCTTTCTTGGCCTCCCTCTCAGGATTATGCATCCTCTaGATGTGTTCCCGTAGTTTGTCTTTTCGCTTAAAT +
Preference number: 6 (lower is better)
Translates to: AFLASLSGLCIL*MCSRSLSFRLN
Trigger: ATTTAAGCGAAAAGACAAACTACGGGAACACATGCAGAGGATGCATAATCCTGAGAGGGAGGCCAAGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp CACCTGGATAAAATCTGGGAACCGTTTCTTACAAGTTaGGCAGGTGAAGTAGCCATCATTGATATGAATGGC +
Preference number: 6 (lower is better)
Translates to: HLDKIWEPFLTS*AGEVAIIDMNG
Trigger: GCCATTCATATCAATGATGGCTACTTCACCTGCCCAACTTGTAAGAAACGGTTCCCAGATTTTATCCAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5
CDS CCA 72 bp CTGGGTGGTTCTTCAGAATGTGGGCTTTGCGCTTGCTaGCACTTTTATAAACCTTATCGCAATACTGACAAA +
Preference number: 6 (lower is better)
Translates to: LGGSSECGLCAC*HFYKPYRNTDK
Trigger: TTTGTCAGTATTGCGATAAGGTTTATAAAAGTGCCAGCAAGCGCAAAGCCCACATTCTGAAGAACCACCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304538.10
ENST00000358825.9
ENST00000360871.8
ENST00000423662.6
ENST00000526082.5
ENST00000528746.5