Pregenerated sensors for PRCC (Homo sapiens)
Ensembl gene IDs: ENSG00000143294Ensembl transcript IDs: ENST00000271526.9, ENST00000454659.1, ENST00000459707.1, ENST00000469071.1, ENST00000473387.1, ENST00000491853.5, ENST00000526188.5
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACGAGGGCTGGGTCCTTaGGGAAAGAGATCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PELRAPSEASHKSLLAPGRGLGP*GKRSWA Trigger: AGCCCAGGATCTCTTTCCCCAAGGACCCAGCCCTCG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| 3UTR-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACGCAGAGGCGAGGGCTaGGTCCTTGGGGAAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: PELRAPSEASHKSLLAPGRRGEG*VLGERD Trigger: ATCTCTTTCCCCAAGGACCCAGCCCTCGCCTCTGCG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| 3UTR-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACGCAGAGGCGAGGGCTaGGTCCTTGGGGAAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: TPELRAPSEASHKSLLAPRRGEG*VLGERD Trigger: ATCTCTTTCCCCAAGGACCCAGCCCTCGCCTCTGCG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| 3UTR-3UTR CAA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGCGAGGGCTGGGTCCTaGGGGAAAGAGATCCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: TPELRAPSEASHKSLLAPARAGS*GKEILG Trigger: GCCCAGGATCTCTTTCCCCAAGGACCCAGCCCTCGC...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| 3UTR CCA 72 bp | TCTATCAAATATGTTCATTCTCGCAGAGGCGAGGGCTaGGTCCTTGGGGAAAGAGATCCTGGGCTTAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SIKYVHSRRGEG*VLGERDPGLRA Trigger: TGCTCTAAGCCCAGGATCTCTTTCCCCAAGGACCCAGCCCTCGCCTCTGCGAGAATGAACATATTTGATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGGCTCACGCCTGGAGGTaGGGGGAAGCCTCCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRAHAWR*GEASQA Trigger: GGCCTGGGAGGCTTCCCCCCACCTCCAGGCGTGAGC...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR TCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGATTGGAGGGGGCAGATTaGGGCCAGGGCCTCGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGLEGAD*GQGLGA Trigger: CGCCCCGAGGCCCTGGCCTCAATCTGCCCCCTCCAA...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACGGCGGGGGAAAGGCTaGCGCCAGCATCTGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPRRGKG*RQHLRG Trigger: CCCCCTCAGATGCTGGCGCCAGCCTTTCCCCCGCCG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGGGTCTCCGGTGGGTaGGGGAAGCAACAGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPGVSGG*GKQQRR Trigger: CCGCCGCTGTTGCTTCCCCCACCCACCGGAGACCCC...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR TCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGGCCCTTGCCGGCAGATaGGGCCTACTTGAGACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRALAGR*GLLETG Trigger: CCCGGTCTCAAGTAGGCCTCATCTGCCGGCAAGGGC...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGAGGAGGCTGAAGCCTaGGGTCTCCGGTGGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPEEAEA*GLRWVG Trigger: CCCCACCCACCGGAGACCCCAGGCTTCAGCCTCCTC...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR GCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGCGTTTCGGGCGCCCTTaGCGGCAGATGAGGCCTACT | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRRFGRP*RQMRPT Trigger: AGTAGGCCTCATCTGCCGGCAAGGGCGCCCGAAACG...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGCAAGGCCGGACCCTTaGGCGCAGGGAGAGAAGCGA | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGARPDP*AQGEKR Trigger: TCGCTTCTCTCCCTGCGCCCAAGGGTCCGGCCTTGC...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGCTGGAAAGCCGGCTCTaGTTCCGTGCCTGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRLESRL*FRAWRQ Trigger: CTGCCTCCAGGCACGGAACCAGAGCCGGCTTTCCAG...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR TCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACAGATGAGGCCTACTTaGGACCGGGGATGCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPQMRPT*DRGCPE Trigger: CTCCGGGCATCCCCGGTCTCAAGTAGGCCTCATCTG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR GCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGCCATCCGAGGGTTTaGGGGAGAAGGCATGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRSHPRV*GRRHGA Trigger: TGCCCCATGCCTTCTCCCGCAAACCCTCGGATGGCT...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR GCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACCGGCTCTGGTTCCGTaGCTGGAGGCAGCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGPALVP*LEAALQ Trigger: CTGAAGAGCTGCCTCCAGGCACGGAACCAGAGCCGG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR GCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGCAGGGCCGGGTCCTGTaGAGGATAGTAGCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRQGRVL*RIVATT Trigger: AGTGGTGGCTACTATCCTGCACAGGACCCGGCCCTG...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR GCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGTGGTGTTTCCGCCGCTaGTGGCCTGTTGGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRWCFRR*WPVGCS Trigger: TGAGCAGCCAACAGGCCAGCAGCGGCGGAAACACCA...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAAAGCAACCAGCGACATaGCGCCTCCCGCGTTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGKQPAT*RLPRFG Trigger: CCCGAAACGCGGGAGGCGCCATGTCGCTGGTTGCTT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAACCGGCACCGCCAATTaGAGGGGGCAGATTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGTGTAN*RGQIEA Trigger: GGCCTCAATCTGCCCCCTCCAATTGGCGGTGCCGGT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGTCCTCTTCTTTGGCTTaGGAAGCCCCAGCGGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRSSSLA*EAPAGD Trigger: GTCCCCCGCTGGGGCTTCCCAAGCCAAAGAAGAGGA...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACTGGAAAGCCGGCTCTaGTTCCGTGCCTGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPLESRL*FRAWRQ Trigger: CTGCCTCCAGGCACGGAACCAGAGCCGGCTTTCCAG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGCGCAGAGGCGAGGGCTaGGTCCTTGGGGAAAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRRRGEG*VLGERD Trigger: ATCTCTTTCCCCAAGGACCCAGCCCTCGCCTCTGCG...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR TCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGCCAAGGGGCCCCACTTaGACCTGCTGCCATCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRPRGPT*TCCHLE Trigger: TTCAAGATGGCAGCAGGTTCAAGTGGGGCCCCTTGG...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR GCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGCTCGCTCTCATCGCTaGTGGCGTAAGCAACCAGCG | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGARSHR*WRKQPA Trigger: CGCTGGTTGCTTACGCCAGCAGCGATGAGAGCGAGC...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR GCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACAGGGCCGGGTCCTGTaGAGGATAGTAGCCACCACT | + |
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Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPQGRVL*RIVATT Trigger: AGTGGTGGCTACTATCCTGCACAGGACCCGGCCCTG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR GCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATGGTGTTTCCGCCGCTaGTGGCCTGTTGGCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPWCFRR*WPVGCS Trigger: TGAGCAGCCAACAGGCCAGCAGCGGCGGAAACACCA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAAGGGCGACGGAGTGGTaGTTGTGGTGCCCACAACAG | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGRATEW*LWCPQQ Trigger: CTGTTGTGGGCACCACAACCACCACTCCGTCGCCCT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACAGAGGGCGACGGAGTaGTGGTTGTGGTGCCCACAA | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGQRATE*WLWCPQ Trigger: TTGTGGGCACCACAACCACCACTCCGTCGCCCTCTG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACTCTGGTTCCGTGCCTaGAGGCAGCTCTTCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGLWFRA*RQLFRD Trigger: GTCCCTGAAGAGCTGCCTCCAGGCACGGAACCAGAG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGATGTTTCCGCCGCTGCTaGCCTGTTGGCTGCTCACCT | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGCFRRC*PVGCSP Trigger: AGGTGAGCAGCCAACAGGCCAGCAGCGGCGGAAACA...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACGAGGGCTGGGTCCTTaGGGAAAGAGATCCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPRGLGP*GKRSWA Trigger: AGCCCAGGATCTCTTTCCCCAAGGACCCAGCCCTCG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR TCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACTCATGGCTACGGCTaGTTTCCACCGAACAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRTHGYG*FPPNKA Trigger: CGCCTTGTTCGGTGGAAATCAGCCGTAGCCATGAGT...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR TCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACCAAGGGGCCCCACTTaGACCTGCTGCCATCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGPRGPT*TCCHLE Trigger: TTCAAGATGGCAGCAGGTTCAAGTGGGGCCCCTTGG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR GCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGAGTGGTGGTTGTGGTaGCCACAACAGGGGCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGEWWLW*PQQGQE Trigger: CTCTTGCCCCTGTTGTGGGCACCACAACCACCACTC...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGCCCGGCAGAAACTCATaGCTACGGCTGATTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRPGRNS*LRLIST Trigger: GGTGGAAATCAGCCGTAGCCATGAGTTTCTGCCGGG...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACGCTCTCATCGCTGCTaGCGTAAGCAACCAGCGACA | + |
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Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPRSHRC*RKQPAT Trigger: TGTCGCTGGTTGCTTACGCCAGCAGCGATGAGAGCG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAACGGAGTGGTGGTTGTaGTGCCCACAACAGGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPTEWWL*CPQQGQ Trigger: TTGCCCCTGTTGTGGGCACCACAACCACCACTCCGT...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGTGGCTCAACTCCAGGTaGCTCAGCCTTTTCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRWLNSR*LSLFRE Trigger: CTCCCTGAAAAGGCTGAGCCACCTGGAGTTGAGCCA...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGGATGGGGTAAGGGTATaGCTCAACTCCAGGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRDGVRV*LNSRWL Trigger: GAGCCACCTGGAGTTGAGCCATACCCTTACCCCATC...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGCAGGGACAGTGGGGATaGGGTAAGGGTATGGCTCAA | + |
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Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRQGQWG*GKGMAQ Trigger: TTGAGCCATACCCTTACCCCATCCCCACTGTCCCTG...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATTGGCTGCATCGTCCTaGAAAGCCGGCTCTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPLAASS*KAGSGS Trigger: GGAACCAGAGCCGGCTTTCCAGGACGATGCAGCCAA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGATTGGCTGCATCGTCCTaGAAAGCCGGCTCTGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGLAASS*KAGSGS Trigger: GGAACCAGAGCCGGCTTTCCAGGACGATGCAGCCAA...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGTGGGCCCCACTGAGCTaGTCATCACCTTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRWAPLS*SSPLIS Trigger: GGAGATCAAAGGTGATGACCAGCTCAGTGGGGCCCA...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACCCCTTAGAGGCGAGTaGCCCAGATGTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPPLRGE*PRCCCR Trigger: TCTGCAGCAACATCTGGGCCACTCGCCTCTAAGGGG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000454659.1 |
||
| CDS-3UTR TCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGATGCTTCGTCATCGATaGAGGAGGCATCTGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRMLRHR*RRHLGQ Trigger: TTGCCCCAGATGCCTCCTTCATCGATGACGAAGCAT...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATCTGAATCTCCCTTATaGAACTCCGGCGCCGCGATC | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPSESPL*NSGAAI Trigger: GATCGCGGCGCCGGAGTTGCATAAGGGAGATTCAGA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACGGTTCCTCTTGCCCTaGAGCCGCTTAAATGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPRFLLP*SRLNAS Trigger: CGAAGCATTTAAGCGGCTGCAGGGCAAGAGGAACCG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR GCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACGGTTCCTCTTGCCCTaGAGCCGCTTAAATGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGRFLLP*SRLNAS Trigger: CGAAGCATTTAAGCGGCTGCAGGGCAAGAGGAACCG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATTGCGGGAGAAGGCATaGGGCAGGAGCAACCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPLREKA*GRSNLL Trigger: TAACAGGTTGCTCCTGCCCCATGCCTTCTCCCGCAA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATGGCTCAACTCCAGGTaGCTCAGCCTTTTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPWLNSR*LSLFRE Trigger: CTCCCTGAAAAGGCTGAGCCACCTGGAGTTGAGCCA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGATGGGGTAAGGGTATaGCTCAACTCCAGGTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGDGVRV*LNSRWL Trigger: GAGCCACCTGGAGTTGAGCCATACCCTTACCCCATC...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACAGGGACAGTGGGGATaGGGTAAGGGTATGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGQGQWG*GKGMAQ Trigger: TTGAGCCATACCCTTACCCCATCCCCACTGTCCCTG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACGTCTTCTTCCTGCGTaGTCTGCTTTGTCACCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPRLLPA*SALSPA Trigger: TGCAGGTGACAAAGCAGATCACGCAGGAAGAAGACG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAATGCTTCGTCATCGATaGAGGAGGCATCTGGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPMLRHR*RRHLGQ Trigger: TTGCCCCAGATGCCTCCTTCATCGATGACGAAGCAT...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR TCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGGCTGAGCTTGTTCTCTaGCCAGGTGTTCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRAELVL*PGVLQF Trigger: GAACTGAAGAACACCTGGTCAGAGAACAAGCTCAGC...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAATCTGCTTTGTCACCTaGAGGGCAGCACTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPICFVT*RAALLA Trigger: TGCCAAGAGTGCTGCCCTGCAGGTGACAAAGCAGAT...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGTGCTGGCCTGTTGGCTaGTCACCTTTCTTTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRCWPVG*SPFFLL Trigger: CAGCAAAAAGAAAGGTGAGCAGCCAACAGGCCAGCA...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR TCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGCTGAGCTTGTTCTCTaGCCAGGTGTTCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPAELVL*PGVLQF Trigger: GAACTGAAGAACACCTGGTCAGAGAACAAGCTCAGC...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR TCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGTTCAGGAATCTCATaGTTCCCCTTAGAGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRSSGIS*FPLEAS Trigger: ACTCGCCTCTAAGGGGAATCATGAGATTCCTGAACT...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454659.1 |
||
| CDS-3UTR GCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCACTGTCGTCTTCTTCCTaGGTGATCTGCTTTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPLSSSS*VICFVT Trigger: GGTGACAAAGCAGATCACGCAGGAAGAAGACGACAG...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR GCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATGCTGGCCTGTTGGCTaGTCACCTTTCTTTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPCWPVG*SPFFLL Trigger: CAGCAAAAAGAAAGGTGAGCAGCCAACAGGCCAGCA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAAAGCACCAGCGGCATTaGCATCGCCATATGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGKHQRH*HRHMWK Trigger: TTTCCACATATGGCGATGCCAATGCCGCTGGTGCTT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAATAAGATATGTGATCTaGTGTTTCCGCCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPIRYVI*CFRRCW Trigger: CCAGCAGCGGCGGAAACACCAGATCACATATCTTAT...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAATAAGATATGTGATCTaGTGTTTCCGCCGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGIRYVI*CFRRCW Trigger: CCAGCAGCGGCGGAAACACCAGATCACATATCTTAT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGTGGCATCGCCATATGTaGAAAACTGATTGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRTQSPFGGITQVFASSRWHRHM*KTDCSC Trigger: ACAGCTACAATCAGTTTTCCACATATGGCGATGCCA...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR TCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAACATTTTATCACACCTaGCAGAGAGCAAAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGTFYHT*QRAKLP Trigger: TGGGAGTTTTGCTCTCTGTCAGGTGTGATAAAATGT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR TCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAACATTTTATCACACCTaGCAGAGAGCAAAACTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPTFYHT*QRAKLP Trigger: TGGGAGTTTTGCTCTCTGTCAGGTGTGATAAAATGT...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATGGCATCGCCATATGTaGAAAACTGATTGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPWHRHM*KTDCSC Trigger: ACAGCTACAATCAGTTTTCCACATATGGCGATGCCA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| 3UTR CAA 72 bp | GAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTaGCTAGCTCCAGGACAGAAAGGAGCTGAATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELRAPSEASHKS*LAPGQKGAEFS Trigger: AGAAAATTCAGCTCCTTTCTGTCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR TCA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGATCGTTTACCAGATTTTaGGTTCAGGAATCTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: PELRAPSEASHKSLLAPGSFTRF*VQESHD Trigger: ATCATGAGATTCCTGAACTCAAAATCTGGTAAACGA...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454659.1 |
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| CDS-3UTR CCA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATGTAATAATCAAAGCTaGGAACAAAGCAGGTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TPELRAPSEASHKSLLAPCNNQS*EQSRFV Trigger: AACGAACCTGCTTTGTTCCCAGCTTTGATTATTACA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454659.1 |
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| CDS TCA 90 bp | CAGCGACATGGCGCCTCCCGCGTTTCGGGCGCCCTTGCCGGCAGATaGGGCCTACTTGAGACCGGGGATGCCCGGAGGCCTAGTAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: QRHGASRVSGALAGR*GLLETGDARRPSRP Trigger: GGGCCTACTAGGCCTCCGGGCATCCCCGGTCTCAAGTAGGCCTCATCTGCCGGCAAGGGCGCCCGAAACGCGGGAGGCGCCATGTCGCTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 90 bp | CCTCCGGCTCGGGCTCAGCCTCATCCGGCTCGCTCTCATCGCTGCTaGCGTAAGCAACCAGCGACATGGCGCCTCCCGCGTTTCGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PPARAQPHPARSHRC*RKQPATWRLPRFGR Trigger: GCGCCCGAAACGCGGGAGGCGCCATGTCGCTGGTTGCTTACGCCAGCAGCGATGAGAGCGAGCCGGATGAGGCTGAGCCCGAGCCGGAGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 90 bp | CTGGCGCCAGCATCTGAGGGGGCGGAGGCAGCAAGGCCGGACCCTTaGGCGCAGGGAGAGAAGCGAACAAGCCCCCTAAAGCGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LAPASEGAEAARPDP*AQGEKRTSPLKRAQ Trigger: CTGGGCCCGCTTTAGGGGGCTTGTTCGCTTCTCTCCCTGCGCCCAAGGGTCCGGCCTTGCTGCCTCCGCCCCCTCAGATGCTGGCGCCAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS GCA 90 bp | CTTCCTCCGGCTCGGGCTCAGCCTCATCCGGCTCGCTCTCATCGCTaGTGGCGTAAGCAACCAGCGACATGGCGCCTCCCGCGTTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPARAQPHPARSHR*WRKQPATWRLPRFG Trigger: CCCGAAACGCGGGAGGCGCCATGTCGCTGGTTGCTTACGCCAGCAGCGATGAGAGCGAGCCGGATGAGGCTGAGCCCGAGCCGGAGGAAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 90 bp | CATCCGGCTCGCTCTCATCGCTGCTGGCGTAAGCAACCAGCGACATaGCGCCTCCCGCGTTTCGGGCGCCCTTGCCGGCAGATGAGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HPARSHRCWRKQPAT*RLPRFGRPCRQMRP Trigger: AGGCCTCATCTGCCGGCAAGGGCGCCCGAAACGCGGGAGGCGCCATGTCGCTGGTTGCTTACGCCAGCAGCGATGAGAGCGAGCCGGATG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 90 bp | AAGCCGGCTCTGGTTCCGTGCCTGGAGGCAGCTCTTCAGGGACAGTaGGGATGGGGTAAGGGTATGGCTCAACTCCAGGTGGCTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KPALVPCLEAALQGQ*GWGKGMAQLQVAQP Trigger: AGGCTGAGCCACCTGGAGTTGAGCCATACCCTTACCCCATCCCCACTGTCCCTGAAGAGCTGCCTCCAGGCACGGAACCAGAGCCGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000491853.5 ENST00000526188.5 |
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| CDS-3UTR CAA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGCGTTTCGGGCGCCCTaGCCGGCAGATGAGGCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: TPELRAPSEASHKSLLAPAFRAP*PADEAY Trigger: GTAGGCCTCATCTGCCGGCAAGGGCGCCCGAAACGC...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAAGCAAGGCCGGACCCTaGGGCGCAGGGAGAGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGSKAGP*GAGREA Trigger: CGCTTCTCTCCCTGCGCCCAAGGGTCCGGCCTTGCT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAATTGGAGGGGGCAGATaGAGGCCAGGGCCTCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGIGGGR*RPGPRG Trigger: GCCCCGAGGCCCTGGCCTCAATCTGCCCCCTCCAAT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGGCGAGGGCTGGGTCCTaGGGGAAAGAGATCCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRTQSPFGGITQVFASSRARAGS*GKEILG Trigger: GCCCAGGATCTCTTTCCCCAAGGACCCAGCCCTCGC...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS CCA 90 bp | GCTCTGGTTCCGTGCCTGGAGGCAGCTCTTCAGGGACAGTGGGGATaGGGTAAGGGTATGGCTCAACTCCAGGTGGCTCAGCCTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALVPCLEAALQGQWG*GKGMAQLQVAQPFQ Trigger: CTGAAAAGGCTGAGCCACCTGGAGTTGAGCCATACCCTTACCCCATCCCCACTGTCCCTGAAGAGCTGCCTCCAGGCACGGAACCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000491853.5 ENST00000526188.5 |
||
| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGAGCCATCCGAGGGTTaGCGGGAGAAGGCATGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGEPSEG*REKAWG Trigger: GCCCCATGCCTTCTCCCGCAAACCCTCGGATGGCTC...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGCGACGGAGTGGTGGTaGTGGTGCCCACAACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGATEWW*WCPQQG Trigger: CCCCTGTTGTGGGCACCACAACCACCACTCCGTCGC...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGCAGATGAGGCCTACTaGAGACCGGGGATGCCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TPELRAPSEASHKSLLAPADEAY*RPGMPG Trigger: TCCGGGCATCCCCGGTCTCAAGTAGGCCTCATCTGC...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGATTCCTCTTCTTTGGCTaGGGAAGCCCCAGCGGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGFLFFG*GSPSGG Trigger: TCCCCCGCTGGGGCTTCCCAAGCCAAAGAAGAGGAA...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACTCTTGGCAGCAGCCTaGATAGCAGAGGGCGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGLLAAA*IAEGDG Trigger: TCCGTCGCCCTCTGCTATCAAGGCTGCTGCCAAGAG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS-3UTR CAA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGCTCCCTCGGTTCCTCTaGCCCTGCAGCCGCTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PRTQSPFGGITQVFASSRLPRFL*PCSRLN Trigger: ATTTAAGCGGCTGCAGGGCAAGAGGAACCGAGGGAG...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS GCA 90 bp | TCCTCATCACTGTCGTCTTCTTCCTGCGTGATCTGCTTTGTCACCTaGAGGGCAGCACTCTTGGCAGCAGCCTTGATAGCAGAGGGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLSSSSCVICFVT*RAALLAAALIAEGD Trigger: GTCGCCCTCTGCTATCAAGGCTGCTGCCAAGAGTGCTGCCCTGCAGGTGACAAAGCAGATCACGCAGGAAGAAGACGACAGTGATGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
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| CDS CCA 90 bp | AGTCCGCCTGCTCCGTACTCTAGGGCTAGCCCCGGCAGAAACTCATaGCTACGGCTGATTTCCACCGAACAAGGCGTACCTCTTCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SPPAPYSRASPGRNS*LRLISTEQGVPLHL Trigger: TAAGTGAAGAGGTACGCCTTGTTCGGTGGAAATCAGCCGTAGCCATGAGTTTCTGCCGGGGCTAGCCCTAGAGTACGGAGCAGGCGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAGCTCTTTCCTCTTCTTaGGCTTGGGAAGCCCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGALSSS*AWEAPA Trigger: CGCTGGGGCTTCCCAAGCCAAAGAAGAGGAAAGAGC...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACTCCCTCGGTTCCTCTaGCCCTGCAGCCGCTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGLPRFL*PCSRLN Trigger: ATTTAAGCGGCTGCAGGGCAAGAGGAACCGAGGGAG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS TCA 90 bp | AGTTTTCGGGGGCTACTTCCTCATCACTGTCGTCTTCTTCCTGCGTaGTCTGCTTTGTCACCTGCAGGGCAGCACTCTTGGCAGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFRGLLPHHCRLLPA*SALSPAGQHSWQQP Trigger: AGGCTGCTGCCAAGAGTGCTGCCCTGCAGGTGACAAAGCAGATCACGCAGGAAGAAGACGACAGTGATGAGGAAGTAGCCCCCGAAAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
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| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGACGAGTGGCCCAGATGTaGCTGCAGACCCTGATAATA | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGRVAQM*LQTLII Trigger: TATTATCAGGGTCTGCAGCAACATCTGGGCCACTCG...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454659.1 |
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| CDS CCA 90 bp | GGCTTAGTATCAGGGGAGCCATCCGAGGGTTTGCGGGAGAAGGCATaGGGCAGGAGCAACCTGTTAGTCTCTTTCACAGTCAGGTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLVSGEPSEGLREKA*GRSNLLVSFTVRFL Trigger: TAAAAACCTGACTGTGAAAGAGACTAACAGGTTGCTCCTGCCCCATGCCTTCTCCCGCAAACCCTCGGATGGCTCCCCTGATACTAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
||
| CDS CCA 90 bp | TGGTGCTGGGCTCAAGTCCAGGGTTTTCCCACATTTCCCCTCCGGTaGCAGGCTCATAAATGTCCACATTTGCTGTTCTCAGCTACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WCWAQVQGFPTFPLR*QAHKCPHLLFSATR Trigger: CCTAGTAGCTGAGAACAGCAAATGTGGACATTTATGAGCCTGCCACCGGAGGGGAAATGTGGGAAAACCCTGGACTTGAGCCCAGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS-3UTR CAA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGCAAGAGAGGAAGTCTaGGTCTTAGAAGCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPELRAPSEASHKSLLAPAREEV*VLEASL Trigger: CAGACTGGCTTCTAAGACCAAGACTTCCTCTCTTGC...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS CCA 90 bp | GGCCCAGATGTTGCTGCAGACCCTGATAATAAGCACCAGCGGCATTaGCATCGCCATATGTGGAAAACTGATTGTAGCTGTAGTCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GPDVAADPDNKHQRH*HRHMWKTDCSCSRP Trigger: GGGACGACTACAGCTACAATCAGTTTTCCACATATGGCGATGCCAATGCCGCTGGTGCTTATTATCAGGGTCTGCAGCAACATCTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454659.1 |
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| CDS-3UTR CAA 90 bp | CCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGTTGATCTCCACAAAGTaGATTTCTTCTCTCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PRTQSPFGGITQVFASSRLISTK*ISSLPR Trigger: CCGAGGGAGAGAAGAAATCAACTTTGTGGAGATCAA...CCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGCATCACACAAGTCTTaGCTAGCTCCAGGACAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TPELRAPSEASHKSLLAPASHKS*LAPGQK Trigger: TTTCTGTCCTGGAGCTAGCAAAGACTTGTGTGATGC...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATTGATCTCCACAAAGTaGATTTCTTCTCTCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TPELRAPSEASHKSLLAPLISTK*ISSLPR Trigger: CCGAGGGAGAGAAGAAATCAACTTTGTGGAGATCAA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR CAA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAAGCTGGTCATCACCTTaGATCTCCACAAAGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: TPELRAPSEASHKSLLAPSWSSP*ISTKLI Trigger: AATCAACTTTGTGGAGATCAAAGGTGATGACCAGCT...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGAAGCTGGTCATCACCTTaGATCTCCACAAAGTTGATT | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGSWSSP*ISTKLI Trigger: AATCAACTTTGTGGAGATCAAAGGTGATGACCAGCT...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
||
| CDS TCA 90 bp | GAACAAAGCAGGTTCGTTTACCAGATTTTGAGTTCAGGAATCTCATaGTTCCCCTTAGAGGCGAGTGGCCCAGATGTTGCTGCAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: EQSRFVYQILSSGIS*FPLEASGPDVAADP Trigger: AGGGTCTGCAGCAACATCTGGGCCACTCGCCTCTAAGGGGAATCATGAGATTCCTGAACTCAAAATCTGGTAAACGAACCTGCTTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454659.1 |
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| CDS-3UTR CAA 90 bp | CCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCAGGATGCTCACCTTTCTTTTaGCTGAATGACTTCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PELRAPSEASHKSLLAPGCSPFF*LNDFMV Trigger: AACCATGAAGTCATTCAGCAAAAAGAAAGGTGAGCA...TCCTGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS-3UTR CAA 90 bp | ACCCCAGAACTCAGAGCCCCTTCGGAGGCATCACACAAGTCTTTGCTAGCTCCATGCTCACCTTTCTTTTaGCTGAATGACTTCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TPELRAPSEASHKSLLAPCSPFF*LNDFMV Trigger: AACCATGAAGTCATTCAGCAAAAAGAAAGGTGAGCA...TGGAGCTAGCAAAGACTTGTGTGATGCCTCCGAAGGGGCTCTGAGTTCTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000454659.1 |
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| CDS CCA 90 bp | TCTTCTGTCAATGACTTAGTCATCCATTGCTGGGCCCCACTGAGCTaGTCATCACCTTTGATCTCCACAAAGTTGATTTCTTCTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVNDLVIHCWAPLS*SSPLISTKLISSLP Trigger: AGGGAGAGAAGAAATCAACTTTGTGGAGATCAAAGGTGATGACCAGCTCAGTGGGGCCCAGCAATGGATGACTAAGTCATTGACAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000459707.1 ENST00000526188.5 |
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| CDS TCA 90 bp | CAGTTGGTAGAGCATGCTCTCCTAAGTGGTTTTTCCAGTAAACAGTaGTGGATCTATGCTGATCTAACCACAGTCCTTTGCTCTGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLVEHALLSGFSSKQ*WIYADLTTVLCSVL Trigger: CAGGACAGAGCAAAGGACTGTGGTTAGATCAGCATAGATCCATCACTGTTTACTGGAAAAACCACTTAGGAGAGCATGCTCTACCAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS TCA 90 bp | TCCGCCCGTAACTGCACTGAACCCGTAACCAAACTTCGATGCAAATaGTTTACTGTCAAAGTCTATATTGGTCTGGGCTTTCATTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SARNCTEPVTKLRCK*FTVKVYIGLGFHSA Trigger: CGCAGAATGAAAGCCCAGACCAATATAGACTTTGACAGTAAATCATTTGCATCGAAGTTTGGTTACGGGTTCAGTGCAGTTACGGGCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS GCA 90 bp | CAAATGATTTACTGTCAAAGTCTATATTGGTCTGGGCTTTCATTCTaGGGTTTTTCTGTCCTCTGCCAGAGTTGTCTCAGACTAGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QMIYCQSLYWSGLSF*GFSVLCQSCLRLEA Trigger: AGCTTCTAGTCTGAGACAACTCTGGCAGAGGACAGAAAAACCGCAGAATGAAAGCCCAGACCAATATAGACTTTGACAGTAAATCATTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CCA 90 bp | CCAAACTTCGATGCAAATGATTTACTGTCAAAGTCTATATTGGTCTaGGCTTTCATTCTGCGGTTTTTCTGTCCTCTGCCAGAGTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PNFDANDLLSKSILV*AFILRFFCPLPELS Trigger: AGACAACTCTGGCAGAGGACAGAAAAACCGCAGAATGAAAGCCCAGACCAATATAGACTTTGACAGTAAATCATTTGCATCGAAGTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CCA 90 bp | CGTAACCAAACTTCGATGCAAATGATTTACTGTCAAAGTCTATATTaGTCTGGGCTTTCATTCTGCGGTTTTTCTGTCCTCTGCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RNQTSMQMIYCQSLY*SGLSFCGFSVLCQS Trigger: ACTCTGGCAGAGGACAGAAAAACCGCAGAATGAAAGCCCAGACCAATATAGACTTTGACAGTAAATCATTTGCATCGAAGTTTGGTTACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CAA 90 bp | GCGCCTCCCGCGTTTCGGGCGCCCTTGCCGGCAGATGAGGCCTACTaGAGACCGGGGATGCCCGGAGGCCTAGTAGGCCCCGCCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: APPAFRAPLPADEAY*RPGMPGGLVGPATW Trigger: CCAGGTGGCGGGGCCTACTAGGCCTCCGGGCATCCCCGGTCTCAAGTAGGCCTCATCTGCCGGCAAGGGCGCCCGAAACGCGGGAGGCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS TCA 72 bp | GGCGCCTCCCGCGTTTCGGGCGCCCTTGCCGGCAGATaGGGCCTACTTGAGACCGGGGATGCCCGGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GASRVSGALAGR*GLLETGDARRP Trigger: AGGCCTCCGGGCATCCCCGGTCTCAAGTAGGCCTCATCTGCCGGCAAGGGCGCCCGAAACGCGGGAGGCGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 72 bp | CGCTCTCATCGCTGCTGGCGTAAGCAACCAGCGACATaGCGCCTCCCGCGTTTCGGGCGCCCTTGCCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSHRCWRKQPAT*RLPRFGRPCRQ Trigger: CTGCCGGCAAGGGCGCCCGAAACGCGGGAGGCGCCATGTCGCTGGTTGCTTACGCCAGCAGCGATGAGAGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CAA 72 bp | GCGTTTCGGGCGCCCTTGCCGGCAGATGAGGCCTACTaGAGACCGGGGATGCCCGGAGGCCTAGTAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: AFRAPLPADEAY*RPGMPGGLVGP Trigger: GGGGCCTACTAGGCCTCCGGGCATCCCCGGTCTCAAGTAGGCCTCATCTGCCGGCAAGGGCGCCCGAAACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CAA 72 bp | CCGGCGCCGCGATCTTCACGGGCTCTTTCCTCTTCTTaGGCTTGGGAAGCCCCAGCGGGGGACCGGCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: PAPRSSRALSSS*AWEAPAGDRHR Trigger: GCGGTGCCGGTCCCCCGCTGGGGCTTCCCAAGCCAAAGAAGAGGAAAGAGCCCGTGAAGATCGCGGCGCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS GCA 72 bp | GCTCGGGCTCAGCCTCATCCGGCTCGCTCTCATCGCTaGTGGCGTAAGCAACCAGCGACATGGCGCCTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: ARAQPHPARSHR*WRKQPATWRLP Trigger: CGGGAGGCGCCATGTCGCTGGTTGCTTACGCCAGCAGCGATGAGAGCGAGCCGGATGAGGCTGAGCCCGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 72 bp | CGGGCTCAGCCTCATCCGGCTCGCTCTCATCGCTGCTaGCGTAAGCAACCAGCGACATGGCGCCTCCCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: RAQPHPARSHRC*RKQPATWRLPR Trigger: ACGCGGGAGGCGCCATGTCGCTGGTTGCTTACGCCAGCAGCGATGAGAGCGAGCCGGATGAGGCTGAGCCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CAA 72 bp | ACCAGCGACATGGCGCCTCCCGCGTTTCGGGCGCCCTaGCCGGCAGATGAGGCCTACTTGAGACCGGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TSDMAPPAFRAP*PADEAYLRPGM Trigger: CATCCCCGGTCTCAAGTAGGCCTCATCTGCCGGCAAGGGCGCCCGAAACGCGGGAGGCGCCATGTCGCTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 72 bp | GCATCTGAGGGGGCGGAGGCAGCAAGGCCGGACCCTTaGGCGCAGGGAGAGAAGCGAACAAGCCCCCTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASEGAEAARPDP*AQGEKRTSPLK Trigger: CTTTAGGGGGCTTGTTCGCTTCTCTCCCTGCGCCCAAGGGTCCGGCCTTGCTGCCTCCGCCCCCTCAGATGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS GCA 72 bp | TGGCTGCATCGTCCTGGAAAGCCGGCTCTGGTTCCGTaGCTGGAGGCAGCTCTTCAGGGACAGTGGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: WLHRPGKPALVP*LEAALQGQWGW Trigger: CCATCCCCACTGTCCCTGAAGAGCTGCCTCCAGGCACGGAACCAGAGCCGGCTTTCCAGGACGATGCAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000491853.5 ENST00000526188.5 |
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| CDS CCA 72 bp | CCGCGATCTTCACGGGCTCTTTCCTCTTCTTTGGCTTaGGAAGCCCCAGCGGGGGACCGGCACCGCCAATTG | + |
|
Preference number: 6 (lower is better) Translates to: PRSSRALSSSLA*EAPAGDRHRQL Trigger: CAATTGGCGGTGCCGGTCCCCCGCTGGGGCTTCCCAAGCCAAAGAAGAGGAAAGAGCCCGTGAAGATCGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 72 bp | GGGGGCATTGGCTGCATCGTCCTGGAAAGCCGGCTCTaGTTCCGTGCCTGGAGGCAGCTCTTCAGGGACAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGIGCIVLESRL*FRAWRQLFRDS Trigger: ACTGTCCCTGAAGAGCTGCCTCCAGGCACGGAACCAGAGCCGGCTTTCCAGGACGATGCAGCCAATGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000491853.5 ENST00000526188.5 |
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| CDS CAA 72 bp | GCCGCGATCTTCACGGGCTCTTTCCTCTTCTTTGGCTaGGGAAGCCCCAGCGGGGGACCGGCACCGCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: AAIFTGSFLFFG*GSPSGGPAPPI Trigger: AATTGGCGGTGCCGGTCCCCCGCTGGGGCTTCCCAAGCCAAAGAAGAGGAAAGAGCCCGTGAAGATCGCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CAA 90 bp | TATGCAACTCCGGCGCCGCGATCTTCACGGGCTCTTTCCTCTTCTTaGGCTTGGGAAGCCCCAGCGGGGGACCGGCACCGCCAATTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: YATPAPRSSRALSSS*AWEAPAGDRHRQLE Trigger: CTCCAATTGGCGGTGCCGGTCCCCCGCTGGGGCTTCCCAAGCCAAAGAAGAGGAAAGAGCCCGTGAAGATCGCGGCGCCGGAGTTGCATA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000271526.9 |
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| CDS CCA 72 bp | CCGTGCCTGGAGGCAGCTCTTCAGGGACAGTGGGGATaGGGTAAGGGTATGGCTCAACTCCAGGTGGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PCLEAALQGQWG*GKGMAQLQVAQ Trigger: CTGAGCCACCTGGAGTTGAGCCATACCCTTACCCCATCCCCACTGTCCCTGAAGAGCTGCCTCCAGGCACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000491853.5 ENST00000526188.5 |
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| CDS CCA 72 bp | TGCATCGTCCTGGAAAGCCGGCTCTGGTTCCGTGCCTaGAGGCAGCTCTTCAGGGACAGTGGGGATGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: CIVLESRLWFRA*RQLFRDSGDGV Trigger: TACCCCATCCCCACTGTCCCTGAAGAGCTGCCTCCAGGCACGGAACCAGAGCCGGCTTTCCAGGACGATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000491853.5 ENST00000526188.5 |
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| CDS CCA 72 bp | CTGGTTCCGTGCCTGGAGGCAGCTCTTCAGGGACAGTaGGGATGGGGTAAGGGTATGGCTCAACTCCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVPCLEAALQGQ*GWGKGMAQLQV Trigger: CACCTGGAGTTGAGCCATACCCTTACCCCATCCCCACTGTCCCTGAAGAGCTGCCTCCAGGCACGGAACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000491853.5 ENST00000526188.5 |
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| CDS CAA 72 bp | CTGGAGGGCTTAGTATCAGGGGAGCCATCCGAGGGTTaGCGGGAGAAGGCATGGGGCAGGAGCAACCTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LEGLVSGEPSEG*REKAWGRSNLL Trigger: TAACAGGTTGCTCCTGCCCCATGCCTTCTCCCGCAAACCCTCGGATGGCTCCCCTGATACTAAGCCCTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
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| CDS CAA 90 bp | GAAGCCAGTCTGGAGGGCTTAGTATCAGGGGAGCCATCCGAGGGTTaGCGGGAGAAGGCATGGGGCAGGAGCAACCTGTTAGTCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: EASLEGLVSGEPSEG*REKAWGRSNLLVSF Trigger: GAAAGAGACTAACAGGTTGCTCCTGCCCCATGCCTTCTCCCGCAAACCCTCGGATGGCTCCCCTGATACTAAGCCCTCCAGACTGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
||
| CDS CCA 72 bp | GCTCCGTACTCTAGGGCTAGCCCCGGCAGAAACTCATaGCTACGGCTGATTTCCACCGAACAAGGCGTACCT | + |
|
Preference number: 6 (lower is better) Translates to: APYSRASPGRNS*LRLISTEQGVP Trigger: AGGTACGCCTTGTTCGGTGGAAATCAGCCGTAGCCATGAGTTTCTGCCGGGGCTAGCCCTAGAGTACGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000271526.9 |
||
| CDS CCA 72 bp | TCAGGGGAGCCATCCGAGGGTTTGCGGGAGAAGGCATaGGGCAGGAGCAACCTGTTAGTCTCTTTCACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGEPSEGLREKA*GRSNLLVSFTV Trigger: GACTGTGAAAGAGACTAACAGGTTGCTCCTGCCCCATGCCTTCTCCCGCAAACCCTCGGATGGCTCCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
||
| CDS CAA 90 bp | GGAGTGGTGGTTGTGGTGCCCACAACAGGGGCAAGAGAGGAAGTCTaGGTCTTAGAAGCCAGTCTGGAGGGCTTAGTATCAGGGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GVVVVVPTTGAREEV*VLEASLEGLVSGEP Trigger: TGGCTCCCCTGATACTAAGCCCTCCAGACTGGCTTCTAAGACCAAGACTTCCTCTCTTGCCCCTGTTGTGGGCACCACAACCACCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
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| CDS GCA 72 bp | TCGGGGGCTACTTCCTCATCACTGTCGTCTTCTTCCTaGGTGATCTGCTTTGTCACCTGCAGGGCAGCACTC | + |
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Preference number: 6 (lower is better) Translates to: SGATSSSLSSSS*VICFVTCRAAL Trigger: GAGTGCTGCCCTGCAGGTGACAAAGCAGATCACGCAGGAAGAAGACGACAGTGATGAGGAAGTAGCCCCCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
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| CDS GCA 72 bp | CTGTCGTCTTCTTCCTGCGTGATCTGCTTTGTCACCTaGAGGGCAGCACTCTTGGCAGCAGCCTTGATAGCA | + |
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Preference number: 6 (lower is better) Translates to: LSSSSCVICFVT*RAALLAAALIA Trigger: TGCTATCAAGGCTGCTGCCAAGAGTGCTGCCCTGCAGGTGACAAAGCAGATCACGCAGGAAGAAGACGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
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| CDS GCA 72 bp | CAGTCAAGCCAGATGTCTAGCCTGTCTCCCACCTACTaGTTATCAAGCTCGCTCCCATCAATCACCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: QSSQMSSLSPTY*LSSSLPSITSG Trigger: GCCAGAGGTGATTGATGGGAGCGAGCTTGATAAGCAGTAGGTGGGAGACAGGCTAGACATCTGGCTTGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CAA 72 bp | GTTGTGGTGCCCACAACAGGGGCAAGAGAGGAAGTCTaGGTCTTAGAAGCCAGTCTGGAGGGCTTAGTATCA | + |
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Preference number: 6 (lower is better) Translates to: VVVPTTGAREEV*VLEASLEGLVS Trigger: TGATACTAAGCCCTCCAGACTGGCTTCTAAGACCAAGACTTCCTCTCTTGCCCCTGTTGTGGGCACCACAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000473387.1 ENST00000491853.5 |
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| CDS GCA 72 bp | GTGATCTGGTGTTTCCGCCGCTGCTGGCCTGTTGGCTaGTCACCTTTCTTTTTGCTGAATGACTTCATGGTT | + |
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Preference number: 6 (lower is better) Translates to: VIWCFRRCWPVG*SPFFLLNDFMV Trigger: AACCATGAAGTCATTCAGCAAAAAGAAAGGTGAGCAGCCAACAGGCCAGCAGCGGCGGAAACACCAGATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000526188.5 |
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| CDS CCA 72 bp | GCTCAAGTCCAGGGTTTTCCCACATTTCCCCTCCGGTaGCAGGCTCATAAATGTCCACATTTGCTGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AQVQGFPTFPLR*QAHKCPHLLFS Trigger: TGAGAACAGCAAATGTGGACATTTATGAGCCTGCCACCGGAGGGGAAATGTGGGAAAACCCTGGACTTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CAA 72 bp | CCACTGAGCTGGTCATCACCTTTGATCTCCACAAAGTaGATTTCTTCTCTCCCTCGGTTCCTCTTGCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLSWSSPLISTK*ISSLPRFLLPC Trigger: GCAGGGCAAGAGGAACCGAGGGAGAGAAGAAATCAACTTTGTGGAGATCAAAGGTGATGACCAGCTCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000459707.1 ENST00000526188.5 |
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| CDS CAA 72 bp | ATCCATTGCTGGGCCCCACTGAGCTGGTCATCACCTTaGATCTCCACAAAGTTGATTTCTTCTCTCCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: IHCWAPLSWSSP*ISTKLISSLPR Trigger: CCGAGGGAGAGAAGAAATCAACTTTGTGGAGATCAAAGGTGATGACCAGCTCAGTGGGGCCCAGCAATGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000459707.1 ENST00000526188.5 |
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| CDS GCA 72 bp | AAGTTGATTTCTTCTCTCCCTCGGTTCCTCTTGCCCTaGAGCCGCTTAAATGCTTCGTCATCGATGAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: KLISSLPRFLLP*SRLNASSSMKE Trigger: CTCCTTCATCGATGACGAAGCATTTAAGCGGCTGCAGGGCAAGAGGAACCGAGGGAGAGAAGAAATCAACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000459707.1 |
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| CDS CCA 72 bp | GATAATAAGCACCAGCGGCATTGGCATCGCCATATGTaGAAAACTGATTGTAGCTGTAGTCGTCCCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: DNKHQRHWHRHM*KTDCSCSRPQA Trigger: AGCCTGGGGACGACTACAGCTACAATCAGTTTTCCACATATGGCGATGCCAATGCCGCTGGTGCTTATTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000491853.5 ENST00000526188.5 |
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| CDS CCA 72 bp | ATATGTGATCTGGTGTTTCCGCCGCTGCTGGCCTGTTaGCTGCTCACCTTTCTTCTGCAAGAGAAGAAAACA | + |
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Preference number: 6 (lower is better) Translates to: ICDLVFPPLLAC*LLTFLLQEKKT Trigger: TGTTTTCTTCTCTTGCAGAAGAAAGGTGAGCAGCCAACAGGCCAGCAGCGGCGGAAACACCAGATCACATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CAA 90 bp | TTGGTCTGGGCTTTCATTCTGCGGTTTTTCTGTCCTCTGCCAGAGTaGTCTCAGACTAGAAGCTTCCTAATCATCTCCACCCAACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LVWAFILRFFCPLPE*SQTRSFLIISTQLP Trigger: TGGGAGTTGGGTGGAGATGATTAGGAAGCTTCTAGTCTGAGACAACTCTGGCAGAGGACAGAAAAACCGCAGAATGAAAGCCCAGACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CCA 72 bp | GTTGCTGCAGACCCTGATAATAAGCACCAGCGGCATTaGCATCGCCATATGTGGAAAACTGATTGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: VAADPDNKHQRH*HRHMWKTDCSC Trigger: ACAGCTACAATCAGTTTTCCACATATGGCGATGCCAATGCCGCTGGTGCTTATTATCAGGGTCTGCAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454659.1 |
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| CDS GCA 72 bp | TTCCCCTCCGGTGGCAGGCTCATAAATGTCCACATTTaGTGTTCTCAGCTACTAGGTGAAGAAATGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: FPSGGRLINVHI*CSQLLGEEMFI Trigger: GATGAACATTTCTTCACCTAGTAGCTGAGAACAGCAAATGTGGACATTTATGAGCCTGCCACCGGAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS GCA 72 bp | CAGCCCTCAGCTCCACAGAAATATTCCTCCATATGCTaGCAACTCAAATTTAGGATTGAGGTGGCAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: QPSAPQKYSSIC*QLKFRIEVADS Trigger: GGAATCTGCCACCTCAATCCTAAATTTGAGTTGGCAGCATATGGAGGAATATTTCTGTGGAGCTGAGGGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491853.5 |
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| CDS CAA 72 bp | GCTTTCATTCTGCGGTTTTTCTGTCCTCTGCCAGAGTaGTCTCAGACTAGAAGCTTCCTAATCATCTCCACC | + |
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Preference number: 6 (lower is better) Translates to: AFILRFFCPLPE*SQTRSFLIIST Trigger: GGTGGAGATGATTAGGAAGCTTCTAGTCTGAGACAACTCTGGCAGAGGACAGAAAAACCGCAGAATGAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS GCA 72 bp | CATCAGCCCTCAGCTCCACAGAAATATTCCTCCATATaGTGCCAACTCAAATTTAGGATTGAGGTGGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: HQPSAPQKYSSI*CQLKFRIEVAD Trigger: ATCTGCCACCTCAATCCTAAATTTGAGTTGGCAGCATATGGAGGAATATTTCTGTGGAGCTGAGGGCTGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000491853.5 |
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| CDS CCA 72 bp | AATGACTTAGTCATCCATTGCTGGGCCCCACTGAGCTaGTCATCACCTTTGATCTCCACAAAGTTGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: NDLVIHCWAPLS*SSPLISTKLIS Trigger: AGAAATCAACTTTGTGGAGATCAAAGGTGATGACCAGCTCAGTGGGGCCCAGCAATGGATGACTAAGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000271526.9 ENST00000454659.1 ENST00000459707.1 ENST00000526188.5 |
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| CDS CAA 72 bp | GAAACAAAGACAGTCTCTCCTGCTTCAATCTATACCTaGCTCCCTCAGCTACTTCCTAAGAGAGACTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: ETKTVSPASIYT*LPQLLPKRDSH Trigger: GTGAGAGTCTCTCTTAGGAAGTAGCTGAGGGAGCAAGGTATAGATTGAAGCAGGAGAGACTGTCTTTGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000459707.1 |
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| CDS TCA 72 bp | GAGCATGCTCTCCTAAGTGGTTTTTCCAGTAAACAGTaGTGGATCTATGCTGATCTAACCACAGTCCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: EHALLSGFSSKQ*WIYADLTTVLC Trigger: GCAAAGGACTGTGGTTAGATCAGCATAGATCCATCACTGTTTACTGGAAAAACCACTTAGGAGAGCATGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS GCA 72 bp | TACTGTCAAAGTCTATATTGGTCTGGGCTTTCATTCTaGGGTTTTTCTGTCCTCTGCCAGAGTTGTCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: YCQSLYWSGLSF*GFSVLCQSCLR Trigger: TCTGAGACAACTCTGGCAGAGGACAGAAAAACCGCAGAATGAAAGCCCAGACCAATATAGACTTTGACAGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CAA 72 bp | AGCTATTACTATGTGACTATGCTTCTCGACCCACAGTaGGTAGAGCATGCTCTCCTAAGTGGTTTTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SYYYVTMLLDPQ*VEHALLSGFSS Trigger: ACTGGAAAAACCACTTAGGAGAGCATGCTCTACCAACTGTGGGTCGAGAAGCATAGTCACATAGTAATAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CCA 72 bp | CACTGTAATAATCCTGATAATAAGCACCAGCGGCATTaGCATCGCCATATGTGGAAAACTGATTGTAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: HCNNPDNKHQRH*HRHMWKTDCSC Trigger: ACAGCTACAATCAGTTTTCCACATATGGCGATGCCAATGCCGCTGGTGCTTATTATCAGGATTATTACAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000271526.9 ENST00000491853.5 |
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| CDS CCA 72 bp | GATGCAAATGATTTACTGTCAAAGTCTATATTGGTCTaGGCTTTCATTCTGCGGTTTTTCTGTCCTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: DANDLLSKSILV*AFILRFFCPLP Trigger: TGGCAGAGGACAGAAAAACCGCAGAATGAAAGCCCAGACCAATATAGACTTTGACAGTAAATCATTTGCATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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| CDS CAA 72 bp | AACTTCGATGCAAATGATTTACTGTCAAAGTCTATATaGGTCTGGGCTTTCATTCTGCGGTTTTTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: NFDANDLLSKSI*VWAFILRFFCP Trigger: AGGACAGAAAAACCGCAGAATGAAAGCCCAGACCAATATAGACTTTGACAGTAAATCATTTGCATCGAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000469071.1 |
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