Pregenerated sensors for PRAL (Homo sapiens)
Ensembl gene IDs: ENSG00000279296Ensembl transcript IDs: ENST00000624952.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGAAAATTCTGATTAAGCCTCTGGGCCCTACAGCCTGGAGAACCTaGAGAATCCTACACCCACAGAACCCGGCTTTGTCCCCAAAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LKILIKPLGPTAWRT*RILHPQNPALSPKN Trigger: ATTCTTTGGGGACAAAGCCGGGTTCTGTGGGTGTAGGATTCTCCAGGTTCTCCAGGCTGTAGGGCCCAGAGGCTTAATCAGAATTTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS TCA 90 bp | GTCCTGTGCAGCAACGTGGATGGAGCTGGAAGCCATTATCCTAAATaGACTCACTCAGAAACAGAAAACCAAATACCACATGTTCTCACT | + |
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Preference number: 5 (lower is better) Translates to: VLCSNVDGAGSHYPK*THSETENQIPHVLT Trigger: AGTGAGAACATGTGGTATTTGGTTTTCTGTTTCTGAGTGAGTTCATTTAGGATAATGGCTTCCAGCTCCATCCACGTTGCTGCACAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS TCA 90 bp | TATACAAAATATGGTAGCATTTTTATACACCAACGACATCCAAGCTaGGAGCCAAATCAAGAATGCAATCCTATTCACAATTGCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: YTKYGSIFIHQRHPS*EPNQECNPIHNCHK Trigger: TTTGTGGCAATTGTGAATAGGATTGCATTCTTGATTTGGCTCTCAGCTTGGATGTCGTTGGTGTATAAAAATGCTACCATATTTTGTATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS CAA 72 bp | TCCCAGCTACTTGGGAGGCCTAGGCGTGAGAATCGCTaGAACCTGGAAGGTGGTGGTTGCAGTGAGCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: SQLLGRPRRENR*NLEGGGCSEPR Trigger: TCTCGGCTCACTGCAACCACCACCTTCCAGGTTCAAGCGATTCTCACGCCTAGGCCTCCCAAGTAGCTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS CCA 72 bp | CTGATTAAGCCTCTGGGCCCTACAGCCTGGAGAACCTaGAGAATCCTACACCCACAGAACCCGGCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LIKPLGPTAWRT*RILHPQNPALS Trigger: GGACAAAGCCGGGTTCTGTGGGTGTAGGATTCTCCAGGTTCTCCAGGCTGTAGGGCCCAGAGGCTTAATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS CCA 72 bp | AGTACACATGGATACAAAGAAGGGAACCGCAGACACTaGGGCCTACCTGAGGTCGGAGCATGGAAGGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: STHGYKEGNRRH*GLPEVGAWKEG Trigger: ACCCTCCTTCCATGCTCCGACCTCAGGTAGGCCCCAGTGTCTGCGGTTCCCTTCTTTGTATCCATGTGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS CCA 72 bp | CTGAAAATTCTGATTAAGCCTCTGGGCCCTACAGCCTaGAGAACCTGGAGAATCCTACACCCACAGAACCCG | + |
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Preference number: 6 (lower is better) Translates to: LKILIKPLGPTA*RTWRILHPQNP Trigger: CGGGTTCTGTGGGTGTAGGATTCTCCAGGTTCTCCAGGCTGTAGGGCCCAGAGGCTTAATCAGAATTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS CCA 72 bp | AAACTTTGTCGCAAGCCTCCTATACTTCTGGCTCAGTaGGCTCCTGACCTTTTCTATGCCATTACACTCCAG | + |
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Preference number: 6 (lower is better) Translates to: KLCRKPPILLAQ*APDLFYAITLQ Trigger: CTGGAGTGTAATGGCATAGAAAAGGTCAGGAGCCCACTGAGCCAGAAGTATAGGAGGCTTGCGACAAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS GCA 72 bp | CTATGCCATTACACTCCAGTCTTTGGGCAGGGCTCATaGTCTGTAACAAGGGACAGCAATATCCAGAGATAT | + |
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Preference number: 6 (lower is better) Translates to: LCHYTPVFGQGS*SVTRDSNIQRY Trigger: ATATCTCTGGATATTGCTGTCCCTTGTTACAGAGCATGAGCCCTGCCCAAAGACTGGAGTGTAATGGCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS TCA 72 bp | CACTGGCATTCCTGCCTACTTGCTGTGGTGGTCTTGTaGAAGGTGATGGGTTTTATTCGTTGGGCTTTAAAA | + |
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Preference number: 6 (lower is better) Translates to: HWHSCLLAVVVL*KVMGFIRWALK Trigger: TTTTAAAGCCCAACGAATAAAACCCATCACCTTTCACAAGACCACCACAGCAAGTAGGCAGGAATGCCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS GCA 72 bp | AAGATTTCACTTTTAACACTGGCATTCCTGCCTACTTaGTGTGGTGGTCTTGTGAAAGGTGATGGGTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: KISLLTLAFLPT*CGGLVKGDGFY Trigger: ATAAAACCCATCACCTTTCACAAGACCACCACAGCAAGTAGGCAGGAATGCCAGTGTTAAAAGTGAAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS CAA 72 bp | ACGTTTGGATTATTTTCCCTCTTTCGAACAAAGACATaGGTTTGCCCAAGGACTACAAATAAACCAACGGGA | + |
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Preference number: 6 (lower is better) Translates to: TFGLFSLFRTKT*VCPRTTNKPTG Trigger: TCCCGTTGGTTTATTTGTAGTCCTTGGGCAAACCAATGTCTTTGTTCGAAAGAGGGAAAATAATCCAAACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS CCA 72 bp | CATCTAATCTTTGACAAAGTTGACAAAAATACGCAATaGGGAAAGAATTCCCCATTCAGTAAGTGGTACTGG | + |
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Preference number: 6 (lower is better) Translates to: HLIFDKVDKNTQ*GKNSPFSKWYW Trigger: CCAGTACCACTTACTGAATGGGGAATTCTTTCCCCATTGCGTATTTTTGTCAACTTTGTCAAAGATTAGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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| CDS TCA 72 bp | TATGGTAGCATTTTTATACACCAACGACATCCAAGCTaGGAGCCAAATCAAGAATGCAATCCTATTCACAAT | + |
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Preference number: 6 (lower is better) Translates to: YGSIFIHQRHPS*EPNQECNPIHN Trigger: ATTGTGAATAGGATTGCATTCTTGATTTGGCTCTCAGCTTGGATGTCGTTGGTGTATAAAAATGCTACCATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000624952.1 |
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