RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRAG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000275342

Ensembl transcript IDs: ENST00000615670.5, ENST00000622241.1

Found 603 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATaGGTGCTTCCAAGGCGAGACAGGAAAGGGTTAGGCAGGGAAGGG +
Preference number: 1 (lower is better)
Translates to: YIQVSQSSVPFPRET*VLPRRDRKGLGREG
Trigger: CCCTTCCCTGCCTAACCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
3UTR CCA 90 bp TACAGAAGAAAACAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTaGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTA +
Preference number: 1 (lower is better)
Translates to: YRRKQGGLSAERRRV*TGNSILSLSYLYMV
Trigger: TACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTGTTTTCTTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
3UTR-3UTR GCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGCCAGGGAGACATGGGTaGTTCCAAGGCGAGACAGGA +
Preference number: 2 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWPGRHG*FQGETG
Trigger: TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGG...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
3UTR-3UTR CCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTTTTCCCAGGGAGACATaGGTGCTTCCAAGGCGAGAC +
Preference number: 2 (lower is better)
Translates to: QGGLSAERRRVWTGNSILFPRET*VLPRRD
Trigger: GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAA...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
3UTR-3UTR CCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGAGAGGAGACGAGTGTaGACGGGCAACAGCATCCTT +
Preference number: 2 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTERRRV*TGNSIL
Trigger: AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTC...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
3UTR CCA 72 bp AAACAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTaGACGGGCAACAGCATCCTTAGTCTTTCATATTTA +
Preference number: 3 (lower is better)
Translates to: KQGGLSAERRRV*TGNSILSLSYL
Trigger: TAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGGCTGCTGGGGGCCACTaGGGGACACGTCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWAAGGH*GTRPQW
Trigger: CCACTGAGGACGTGTCCCCCAGTGGCCCCCAGCAGC...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGTCTCTCTCCCGCAGCTaGGCGCGCACCTCGAACGGG +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWSLSRS*ARTSNG
Trigger: CCCGTTCGAGGTGCGCGCCCAGCTGCGGGAGAGAGA...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGCCGCTTCTCCTGCTCTaGGGGCCCGGAACACTTCCC +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWPLLLL*GPGTLP
Trigger: GGGAAGTGTTCCGGGCCCGCAGAGCAGGAGAAGCGG...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGTGGCAGCCTCCGAGGTaGGGGACAGTTTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWWQPPR*GTVSWG
Trigger: GCCCCAAGAAACTGTCCCTCACCTCGGAGGCTGCCA...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGGTGCATACCTGGCCTTaGCCCTGGGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWVHTWP*PWAAAA
Trigger: TGCAGCTGCTGCCCAGGGCCAAGGCCAGGTATGCAC...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGCTTCTGCTGCAGGTTTaGGGTGCCGCCCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWLLLQV*GAARLL
Trigger: CAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAG...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGAGCGACGGTGCAGGCTaGGGCTTGGCTCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWSDGAG*GLAHRS
Trigger: GCTTCTGTGAGCCAAGCCCCAGCCTGCACCGTCGCT...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGACAGGTCCCGGTGGATaGTCCCGTGCTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWTGPGG*SRAPSG
Trigger: ACCTGAAGGAGCACGGGATCATCCACCGGGACCTGT...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGGTTCAGCTTGGGGCTTaGTGTTCCGGGCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWVQLGA*CSGLGG
Trigger: TCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAAC...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGTCACAGCATAGGTGCTaGCGGGGTCCTCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWSQHRC*RGPQSR
Trigger: CCTGCTCTGAGGACCCCGGCAGCACCTATGCTGTGA...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGATGGTGGCTGACACCTaGGGAGTTGGGTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWMVADT*GVGSGL
Trigger: CAGCCCAGACCCAACTCCCCAGGTGTCAGCCACCAT...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTCCTCTGTTCCGAGGCTaGCGAGGCGGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILPLFRG*RGGRLG
Trigger: CCCCAGCCTGCCGCCTCGTCAGCCTCGGAACAGAGG...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGCGCGTCGGGGGAGCTaGGCATGCTGGACGGCACCG +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQARRGS*ACWTAP
Trigger: CGGTGCCGTCCAGCATGCTCAGCTCCCCCGACGCGC...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGGTGGGGTGGAGACGGTaGCAGGTCGTGGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWVGWRR*QVVEFE
Trigger: TTCAAACTCCACGACCTGGCACCGTCTCCACCCCAC...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGGGCCGGCCACCAGCTaGTGGTCGCTCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDGPATS*WSLRRQ
Trigger: CTGCCTGCGGAGCGACCACCAGCTGGTGGCCGGCCC...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGGACGAAGGGGCTACTaGCGCCGCTGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQGRRGY*RRCRCR
Trigger: GCGGCAGCGGCAGCGGCGCCAGTAGCCCCTTCGTCC...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGCTCCGCCTGGTGGCTaGCCGCCGAGTCCCGCACGA +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDAPPGG*PPSPAR
Trigger: TCGTGCGGGACTCGGCGGCCAGCCACCAGGCGGAGC...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGGCCCGCCAGCCCTGCTaGCGGAAGCCAGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWARQPC*RKPVAT
Trigger: AGTGGCCACTGGCTTCCGGCAGCAGGGCTGGCGGGC...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGGTTGCCCGCCAGCCCTaGTGCCGGAAGCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWVARQP*CRKPVA
Trigger: GGCCACTGGCTTCCGGCAGCAGGGCTGGCGGGCAAC...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGGTTGCCCGCCAGCCCTaGTGCCGGAAGCCAGTGGCC +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRVARQP*CRKPVA
Trigger: GGCCACTGGCTTCCGGCAGCAGGGCTGGCGGGCAAC...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGCAGCCGCCTCTGTTaGCCGCCAGCCCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARRSRLC*PPALLP
Trigger: CGGCAGCAGGGCTGGCGGGCAACAGAGGCGGCTGCG...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGTTTTCACAGCATAGGTaGTGCCGGGGTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWFSQHR*CRGPQS
Trigger: GCTCTGAGGACCCCGGCAGCACCTATGCTGTGAAAA...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGGCTCCACGCCCCGCCTaGGATCCACCGCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRAPRPA*DPPPSP
Trigger: CGGAGAAGGCGGTGGATCGCAGGCGGGGCGTGGAGC...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAGCTCCGCCTGGTGGCTaGCCGCCGAGTCCCGCACGA +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARAPPGG*PPSPAR
Trigger: TCGTGCGGGACTCGGCGGCCAGCCACCAGGCGGAGC...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTTCTCTCTCCCGCAGCTaGGCGCGCACCTCGAACGGG +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILSLSRS*ARTSNG
Trigger: CCCGTTCGAGGTGCGCGCCCAGCTGCGGGAGAGAGA...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGTTTCCCAGGGAGACATaGGTGCTTCCAAGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWFPRET*VLPRRD
Trigger: GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAA...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGGAGAGGAGACGAGTGTaGACGGGCAACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWERRRV*TGNSIL
Trigger: AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTC...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGGGGCTTGGAGTAAGGTaGGCTGTTCACACCTTCATC +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWGLGVR*AVHTFI
Trigger: GATGAAGGTGTGAACAGCTCACCTTACTCCAAGCCC...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGGCCCAGGGCCCTGGTaGCAGCCAGATGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDGPGPW*QPDVVP
Trigger: TGGGACCACATCTGGCTGTCACCAGGGCCCTGGGCC...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGACCTCTGTTCCGAGGCTaGCGAGGCGGCAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGPLFRG*RGGRLG
Trigger: CCCCAGCCTGCCGCCTCGTCAGCCTCGGAACAGAGG...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGCGCGTCGGGGGAGCTaGGCATGCTGGACGGCACCG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGARRGS*ACWTAP
Trigger: CGGTGCCGTCCAGCATGCTCAGCTCCCCCGACGCGC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTGGCCGGCTGCGGGGCTaGGAGTGCCACCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIGRLRG*ECHQQA
Trigger: CGCCTGCTGGTGGCACTCTCAGCCCCGCAGCCGGCC...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGGGGCCCCGCTTCTCCTaGTCTGCGGGCCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRGPRFS*SAGPEH
Trigger: GTGTTCCGGGCCCGCAGAGCAGGAGAAGCGGGGCCC...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGCCCGCCAGCCCTGCTaGCGGAAGCCAGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLARQPC*RKPVAT
Trigger: AGTGGCCACTGGCTTCCGGCAGCAGGGCTGGCGGGC...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACGCAGCCGCCTCTGTTaGCCGCCAGCCCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELERSRLC*PPALLP
Trigger: CGGCAGCAGGGCTGGCGGGCAACAGAGGCGGCTGCG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGGCGCCTCCTCCGAGGTaGCCGGCTGCTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEAPPPR*PAAAPA
Trigger: AGCTGGTGCAGCAGCCGGGCACCTCGGAGGAGGCGC...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTTCCAGTTGTGCAGCGTaGCGCACAGCGCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILSSCAA*RTAPPP
Trigger: CGGAGGAGGCGCTGTGCGGCACGCTGCACAACTGGA...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAGGGCCGGCCACCAGCTaGTGGTCGCTCCGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELEGPATS*WSLRRQ
Trigger: CTGCCTGCGGAGCGACCACCAGCTGGTGGCCGGCCC...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGGCTAGGGGTCACCCCTaGGCAGCCAGGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRARGHP*AARVLL
Trigger: CAGCAGGACCCTGGCTGCCCAGGGGTGACCCCTAGC...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGCTGCTGGGGGCCACTaGGGGACACGTCCTCAGTGG +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDAAGGH*GTRPQW
Trigger: CCACTGAGGACGTGTCCCCCAGTGGCCCCCAGCAGC...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAGGGGCCCCTTTGCACTaGAGGCCAGGGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGGAPLH*RPGLPQ
Trigger: CTGCGGGAGCCCTGGCCTCCAGTGCAAAGGGGCCCC...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAGGCCCAGGGCCCTGGTaGCAGCCAGATGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARGPGPW*QPDVVP
Trigger: TGGGACCACATCTGGCTGTCACCAGGGCCCTGGGCC...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGCTCCCAGCACGTGGGTaGGCAGTCCCTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRLPARG*AVPATM
Trigger: CATGGTGGCAGGGACTGCTCACCCACGTGCTGGGAG...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGCTGCAGGCCGGGTaGGTAGAGGGACAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMELLQAG*VEGQRG
Trigger: CCCGCGCTGTCCCTCTACTCACCCGGCCTGCAGCAG...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGCCTGCCCCGGGAACCTaGAGTCTGGGAGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWPAPGT*SLGGSL
Trigger: AAGGCTGCCTCCCAGACTGCAGGTTCCCGGGGCAGG...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGCCCTGCCACCATGCCTaGCCCGGGAACCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRPCHHA*PGNLQS
Trigger: AGACTGCAGGTTCCCGGGGCAGGCATGGTGGCAGGG...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGTGGGTGAGCAGTCCCTaGCACCATGCCTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLWVSSP*HHACPG
Trigger: CCCGGGGCAGGCATGGTGGCAGGGACTGCTCACCCA...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACCCGCTTCTCCTGCTCTaGGGGCCCGGAACACTTCCC +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDPLLLL*GPGTLP
Trigger: GGGAAGTGTTCCGGGCCCGCAGAGCAGGAGAAGCGG...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAAGGGCCCCGCTTCTCCTaGTCTGCGGGCCCGGAACAC +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEGPRFS*SAGPEH
Trigger: GTGTTCCGGGCCCGCAGAGCAGGAGAAGCGGGGCCC...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTCTGGAGCTCAGCCCCTaGCCAGCCGAAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILLELSP*PAEVSS
Trigger: AGAGGAGACTTCGGCTGGGCAGGGGCTGAGCTCCAG...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGACGACTCCAGGTGCCTaGCTGGAACCTGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWTTPGA*LEPGPP
Trigger: AGGCGGCCCAGGTTCCAGGCAGGCACCTGGAGTCGT...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGGCTGCAGGTTTGGGGTaGCGCCCGGCTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWAAGLG*RPASAW
Trigger: CCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGC...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGCCCCACAGCAGGCACTaGAGCACGCGCTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEPHSRH*STRLAS
Trigger: CGAGGCCAAGCGCGTGCTGCAGTGCCTGCTGTGGGG...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACCCCACAGCAGGCACTaGAGCACGCGCTTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARPHSRH*STRLAS
Trigger: CGAGGCCAAGCGCGTGCTGCAGTGCCTGCTGTGGGG...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGAAGGGGCAGCGACGGTaGAGGCTGGGGCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQKGQRR*RLGLGS
Trigger: TGAGCCAAGCCCCAGCCTGCACCGTCGCTGCCCCTT...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAGGCAGTTCTCAGGCCTaGGAGGCAGGCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGGSSQA*EAGAVE
Trigger: CTCCACCGCGCCTGCCTCCCAGGCCTGAGAACTGCC...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGTGGCGGAAGCTCTCCTaGGTGGAGGGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQWRKLS*VEGRSW
Trigger: CCAAGACCGGCCCTCCACCCAGGAGAGCTTCCGCCA...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGCTGGGGAGTTGGGTCTaGGCTGTCCCGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRLGSWV*AVPAPA
Trigger: GGCTGGGGCCGGGACAGCCCAGACCCAACTCCCCAG...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGCTCACAGGCCCTCGTaGCCACTGCACCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLAHRPS*PLHPHC
Trigger: GCAGTGGGGGTGCAGTGGCCACGAGGGCCTGTGAGC...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTCCTACCTCGGAGTTCTaGCTCACAGGCCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILPTSEF*LTGPRG
Trigger: GCCACGAGGGCCTGTGAGCCAGAACTCCGAGGTAGG...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCCTTGGGATGGAGGCTaGGGCCCAATGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQPWDGG*GPMLLP
Trigger: CGGCAGCAGCATTGGGCCCCAGCCTCCATCCCAAGG...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGGGGCCCCTTTGCACTaGAGGCCAGGGCTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGGAPLH*RPGLPQ
Trigger: CTGCGGGAGCCCTGGCCTCCAGTGCAAAGGGGCCCC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTGGGTCTGGTGCATCTTaGGCCGACAGGGTGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILGSGAS*ADRVLV
Trigger: AACCAGCACCCTGTCGGCTCAAGATGCACCAGACCC...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR TCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACTGGCAGCCTCCGAGGTaGGGGACAGTTTCTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDWQPPR*GTVSWG
Trigger: GCCCCAAGAAACTGTCCCTCACCTCGGAGGCTGCCA...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACCCTCCAGCAGACGGTaGCACCGGGGACCCTACAGG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEPSSRR*HRGPYR
Trigger: CCTGTAGGGTCCCCGGTGTCACCGTCTGCTGGAGGG...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTCTGCTGCAGGCCGGGTaGGTAGAGGGACAGCGCGGG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHILLQAG*VEGQRG
Trigger: CCCGCGCTGTCCCTCTACTCACCCGGCCTGCAGCAG...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGACAGTCCCTGCCACCATaGCTGCCCCGGGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGQSLPP*LPREPA
Trigger: TGCAGGTTCCCGGGGCAGGCATGGTGGCAGGGACTG...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGTGGGTGAGCAGTCCCTaGCACCATGCCTGCCCCGGG +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRWVSSP*HHACPG
Trigger: CCCGGGGCAGGCATGGTGGCAGGGACTGCTCACCCA...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGCCACTGCACCCCCACTaGAGAGTCAGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRPLHPH*RVRAAQ
Trigger: CTGAGCAGCCCTGACTCTGCAGTGGGGGTGCAGTGG...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCGGAGGGGGCCCCTTTaGACTGGAGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLRRGPL*TGGQGS
Trigger: GGAGCCCTGGCCTCCAGTGCAAAGGGGCCCCCTCCG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGCTCCACGCCCCGCCTaGGATCCACCGCCTTCTCCG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLAPRPA*DPPPSP
Trigger: CGGAGAAGGCGGTGGATCGCAGGCGGGGCGTGGAGC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGCCGGCCACCAGCTGGTaGTCGCTCCGCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRPATSW*SLRRQK
Trigger: CTTCTGCCTGCGGAGCGACCACCAGCTGGTGGCCGG...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGGCAGTTCTCAGGCCTaGGAGGCAGGCGCGGTGGAG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGGSSQA*EAGAVE
Trigger: CTCCACCGCGCCTGCCTCCCAGGCCTGAGAACTGCC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGATGGCGGAAGCTCTCCTaGGTGGAGGGCCGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARWRKLS*VEGRSW
Trigger: CCAAGACCGGCCCTCCACCCAGGAGAGCTTCCGCCA...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCTGGGGAGTTGGGTCTaGGCTGTCCCGGCCCCAGCC +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLLGSWV*AVPAPA
Trigger: GGCTGGGGCCGGGACAGCCCAGACCCAACTCCCCAG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACCAGAGGAGCCATCTGTaGGGTGGAGACGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDQRSHL*GGDGAR
Trigger: CCTGGCACCGTCTCCACCCCACAGATGGCTCCTCTG...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGAGGAGAAGACAGGATaGTGGCGGTTCCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDEEKTG*WRFPGL
Trigger: GAGCCCCGGGAACCGCCACCATCCTGTCTTCTCCTC...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCTGGACACGCTCAGCTaGGAGGATGAGGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRLDTLS*EDEAEG
Trigger: CCCCTCCGCCTCATCCTCCCAGCTGAGCGTGTCCAG...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCGGTGGAGGCTTGACTaGACACGCTCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQRWRLD*TRSAGR
Trigger: CCTCCCAGCTGAGCGTGTCCAGTCAAGCCTCCACCG...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGGCTGGGTGCTCCCGGTaGAGGCTTGACTGGACACGC +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEAGCSR*RLDWTR
Trigger: GCGTGTCCAGTCAAGCCTCCACCGGGAGCACCCAGC...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAGCGACGGTGCAGGCTaGGGCTTGGCTCACAGAAGC +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRSDGAG*GLAHRS
Trigger: GCTTCTGTGAGCCAAGCCCCAGCCTGCACCGTCGCT...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGGACTGTGATGGTGGCTaGCACCTGGGGAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGDCDGG*HLGSWV
Trigger: GACCCAACTCCCCAGGTGTCAGCCACCATCACAGTC...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCCCTCCAGCAGACGGTaGCACCGGGGACCCTACAGG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLPSSRR*HRGPYR
Trigger: CCTGTAGGGTCCCCGGTGTCACCGTCTGCTGGAGGG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGTCCTCTATCCGGCACTaGCGACTCCAGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGESSIRH*RLQVPA
Trigger: GGCAGGCACCTGGAGTCGTCAGTGCCGGATAGAGGA...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGGCAGGTCCTAGAGTCTaGGGCCAGGCTGTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRAGPRV*GQAVRG
Trigger: TCCACGGACAGCCTGGCCTCAGACTCTAGGACCTGC...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACTGTTGGTGGGCGAGTaGGCCAGCTCAGACGAGGGA +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARLLVGE*ASSDEG
Trigger: TCCCTCGTCTGAGCTGGCTCACTCGCCCACCAACAG...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGACTCCCGGTGGAGGCTTaGCTGGACACGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGLPVEA*LDTLSW
Trigger: CCAGCTGAGCGTGTCCAGTCAAGCCTCCACCGGGAG...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAAAGGAGACCGTGCAGCTaGAGCTGGGTGCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMERRPCS*SWVLPV
Trigger: CACCGGGAGCACCCAGCTTCAGCTGCACGGTCTCCT...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCGATGCGGATACGCTTaGTGGGGTCGGCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQRCGYA*WGRPPV
Trigger: TACTGGAGGCCGACCCCATCAAGCGTATCCGCATCG...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGTCGGGAGGGGGAGCTTaGCAGGGGCTCGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRSGGGA*QGLVSR
Trigger: TCTGGAGACGAGCCCCTGGCAAGCTCCCCCTCCCGA...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAGTACACCTCGGAAGCTaGCCAGGTAGACGACGGGGG +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGVHLGS*PGRRRG
Trigger: CCCCCGTCGTCTACCTGGGCAGCTTCCGAGGTGTAC...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCCAGGGTCCTGCTaGTTCTCTGGGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARQPGSC*FSGAGS
Trigger: GGAACCTGCCCCAGAGAAGCAGCAGGACCCTGGCTG...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGGGGCAGCCAGGGTCCTaGTGCTTCTCTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRGQPGS*CFSGAG
Trigger: ACCTGCCCCAGAGAAGCAGCAGGACCCTGGCTGCCC...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCGGAGGGGGCCCCTTTaGACTGGAGGCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVRRGPL*TGGQGS
Trigger: GGAGCCCTGGCCTCCAGTGCAAAGGGGCCCCCTCCG...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTGGTGCTCCAGCCCGTTaGAGAGTTGCAGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILGAPAR*RVAEAG
Trigger: TCCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACC...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGCCGTGCTCCTTCAGGTaGTCCAGCCCGTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGPCSFR*SSPLQS
Trigger: ACTCTGCAACGGGCTGGAGCACCTGAAGGAGCACGG...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACCCGTGCTCCTTCAGGTaGTCCAGCCCGTTGCAGAGT +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDPCSFR*SSPLQS
Trigger: ACTCTGCAACGGGCTGGAGCACCTGAAGGAGCACGG...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAGCTGCAGGTTTGGGGTaGCGCCCGGCTTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELEAAGLG*RPASAW
Trigger: CCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGC...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGAAGGGGCAGCGACGGTaGAGGCTGGGGCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRKGQRR*RLGLGS
Trigger: TGAGCCAAGCCCCAGCCTGCACCGTCGCTGCCCCTT...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGAGCCGACAGGGTGCTaGTTCATCTTGCGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLEPTGC*FILRPA
Trigger: AGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTC...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCCGGCCACCAGCTGGTaGTCGCTCCGCAGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLPATSW*SLRRQK
Trigger: CTTCTGCCTGCGGAGCGACCACCAGCTGGTGGCCGG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAATCTGGGAGGCAGCCTTaGCAACAGGGCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELESGRQP*QQGSQG
Trigger: GCCCTGGGAGCCCTGTTGCCAAGGCTGCCTCCCAGA...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGAGGATGGGTGGGCAGTaGGGCCCTGGCTACAGCACT +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRRMGGQ*GPGYST
Trigger: AGTGCTGTAGCCAGGGCCCCACTGCCCACCCATCCT...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTGCTAGGGGTCACCCCTaGGCAGCCAGGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIARGHP*AARVLL
Trigger: CAGCAGGACCCTGGCTGCCCAGGGGTGACCCCTAGC...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGATGGTGGCTGACACCTaGGGAGTTGGGTCTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQMVADT*GVGSGL
Trigger: CAGCCCAGACCCAACTCCCCAGGTGTCAGCCACCAT...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACTCCAGGTGCCTGCCTaGAACCTGGGCCGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELELQVPA*NLGRLC
Trigger: ACAGAGGCGGCCCAGGTTCCAGGCAGGCACCTGGAG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGACAGAGGAGCCATCTGTaGGGTGGAGACGGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGQRSHL*GGDGAR
Trigger: CCTGGCACCGTCTCCACCCCACAGATGGCTCCTCTG...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGCTGGGTGCTCCCGGTaGAGGCTTGACTGGACACGC +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGAGCSR*RLDWTR
Trigger: GCGTGTCCAGTCAAGCCTCCACCGGGAGCACCCAGC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGAGGTCCTCACATTTaGCTACAAGGCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILRGPHI*LQGGPG
Trigger: CCCTGGCCCGCCTTGTAGCCAAATGTGAGGACCTCT...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAGGCACAGGTCCCGGTaGATGATCCCGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRRHRSR*MIPCSF
Trigger: GAAGGAGCACGGGATCATCCACCGGGACCTGTGCCT...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGGAGGGCGAGCACCTTTaGTCACTGTCATCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGEGEHL*SLSSSE
Trigger: CTCGGAGGATGACAGTGATCAAAGGTGCTCGCCCTC...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTTTCTATCTTGGCCTGTaGCTTGGAAGGCACCGGAGC +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILFYLGL*LGRHRS
Trigger: GCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAA...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGCTGTTGGTGGGCGAGTaGGCCAGCTCAGACGAGGGA +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRLLVGE*ASSDEG
Trigger: TCCCTCGTCTGAGCTGGCTCACTCGCCCACCAACAG...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGGTCCTCAGTGGAGCCTaGAGGAAACGGAACGGGAGC +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRVLSGA*RKRNGS
Trigger: GCTCCCGTTCCGTTTCCTTCAGGCTCCACTGAGGAC...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTCTCCCGGTGGAGGCTTaGCTGGACACGCTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHILPVEA*LDTLSW
Trigger: CCAGCTGAGCGTGTCCAGTCAAGCCTCCACCGGGAG...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTTGGTGTTACAAGTCAGCTTaGAGAGCGACCAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: DRKGLGREGAATVQAGAWCYKSA*RATSYS
Trigger: AGAATAACTGGTCGCTCTTCAAGCTGACTTGTAACA...CCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAAAGTCGGAGGCGGTCTaGTGTGGCACCTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELEKSEAV*CGTSRV
Trigger: CACCCGAGAGGTGCCACATCAGACCGCCTCCGACTT...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGACAGGTCCCGGTGGATaGTCCCGTGCTCCTTCAGGT +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLTGPGG*SRAPSG
Trigger: ACCTGAAGGAGCACGGGATCATCCACCGGGACCTGT...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGGGTGCTGGTTCATCTTaGGCCCGGCTCTCTGGTGCA +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRGAGSS*ARLSGA
Trigger: TGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACC...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR GCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGCCTCTCCTTGGGCTTaGTCTCGCTGGCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLASPWA*SRWHCE
Trigger: CTCACAGTGCCAGCGAGAGCAAGCCCAAGGAGAGGC...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCACGACTCCAGGTGCCTaGCTGGAACCTGGGCCGCCT +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLTTPGA*LEPGPP
Trigger: AGGCGGCCCAGGTTCCAGGCAGGCACCTGGAGTCGT...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGGTGCTCCAGCCCGTTaGAGAGTTGCAGAAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQGAPAR*RVAEAG
Trigger: TCCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACC...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGTGGCTCTTCTTCTGCTaGAGGTTTGGGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLWLFFC*RFGVPP
Trigger: GGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCA...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCCAGGGAGACATGGGTaGTTCCAAGGCGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQPGRHG*FQGETG
Trigger: TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGG...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTGACCATGGTGTAAGCTaGGGGACAGCGAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILDHGVS*GTARIA
Trigger: GGCAATTCTCGCTGTCCCCCAGCTTACACCATGGTC...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGTGTGCAGGCCGACCATaGTGTAAGCTGGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRCAGRP*CKLGDS
Trigger: GCTGTCCCCCAGCTTACACCATGGTCGGCCTGCACA...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGGGAAGCTCTCCTGGGTaGAGGGCCGGTCTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRGSSPG*RAGLGK
Trigger: CTTACCAAGACCGGCCCTCCACCCAGGAGAGCTTCC...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGGGCAGCAGTCCAGGATaGAGCAGTACTCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWGSSPG*SSTLHP
Trigger: AGGGTGGAGAGTACTGCTCCATCCTGGACTGCTGCC...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCCTGCTCCCAGCACGTaGGTGAGCAGTCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLPAPST*VSSPCH
Trigger: GTGGCAGGGACTGCTCACCCACGTGCTGGGAGCAGG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGTTACCTGTGCATACCTaGCCTTGGCCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGLPVHT*PWPWAA
Trigger: TGCTGCCCAGGGCCAAGGCCAGGTATGCACAGGTAA...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACCTACCTCGGAGTTCTaGCTCACAGGCCCTCGTGGC +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELEPTSEF*LTGPRG
Trigger: GCCACGAGGGCCTGTGAGCCAGAACTCCGAGGTAGG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGCTGGGGACACCTGGATaGGTCACTGATAGCGACACC +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWLGTPG*VTDSDT
Trigger: GGTGTCGCTATCAGTGACCCATCCAGGTGTCCCCAG...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGGACGGTGCCAGGTCGTaGAGTTTGAATGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWDGARS*SLNGPW
Trigger: CCACGGACCATTCAAACTCCACGACCTGGCACCGTC...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGAGCCATCTGTGGGGTaGAGACGGTGCCAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGEPSVG*RRCQVV
Trigger: CACGACCTGGCACCGTCTCCACCCCACAGATGGCTC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGGAGCCATCTGTGGGGTaGAGACGGTGCCAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLREPSVG*RRCQVV
Trigger: CACGACCTGGCACCGTCTCCACCCCACAGATGGCTC...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGGCTTCTTCCCGCTGTTaGTGGGCGAGTGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRASSRC*WASEPA
Trigger: AGCTGGCTCACTCGCCCACCAACAGCGGGAAGAAGC...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGATTGCTGTTCCGGGCTTaGGGGAGCCTTGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGLLFRA*GSLGSR
Trigger: TCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAA...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGGGCTTAGGTTCAGCTTaGGGCTTGCTGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGGLGSA*GLLFRA
Trigger: AGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCC...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGGCTTAGGTTCAGCTTaGGGCTTGCTGTTCCGGGCT +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQGLGSA*GLLFRA
Trigger: AGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCC...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGACGGTGGAGGCTTGACTaGACACGCTCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGRWRLD*TRSAGR
Trigger: CCTCCCAGCTGAGCGTGTCCAGTCAAGCCTCCACCG...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGAGAGGTCCTCACATTTaGCTACAAGGCGGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGRGPHI*LQGGPG
Trigger: CCCTGGCCCGCCTTGTAGCCAAATGTGAGGACCTCT...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGTGGCCGCAGTCCTGCTaGATGTTAAAGTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRWPQSC*MLKCTG
Trigger: GCCCGTGCACTTTAACATCCAGCAGGACTGCGGCCA...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACTGGCCGCAGTCCTGCTaGATGTTAAAGTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDWPQSC*MLKCTG
Trigger: GCCCGTGCACTTTAACATCCAGCAGGACTGCGGCCA...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACCGAGGCGACGAAGTaGCCGCAGTCCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGTEATK*PQSCWM
Trigger: CATCCAGCAGGACTGCGGCCACTTCGTCGCCTCGGT...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACTTCTGCTGCAGGTTTaGGGTGCCGCCCGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELELLLQV*GAARLL
Trigger: CAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAGCACCTCGAACGGGTTaGGTTGGTGCAGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARAPRTG*VGAAAR
Trigger: ACGAGCTGCTGCACCAACCCAACCCGTTCGAGGTGC...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACTGCAGCACGCGCTTaGCCTCGCCGATGCGGATAC +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRTAARA*PRRCGY
Trigger: GTATCCGCATCGGCGAGGCCAAGCGCGTGCTGCAGT...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGGTGCAGGCTGGGGCTTaGCTCACAGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEVQAGA*LTEAAG
Trigger: TCCTGCAGCTTCTGTGAGCCAAGCCCCAGCCTGCAC...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGTTCTATCTTGGCCTGTaGCTTGGAAGGCACCGGAGC +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRFYLGL*LGRHRS
Trigger: GCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAA...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGCTCTCGCTGGCACTGTaGGCATGGCTTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRLSLAL*AWLSLE
Trigger: CTCCAGGGAAAGCCATGCTCACAGTGCCAGCGAGAG...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACTCTCGCTGGCACTGTaGGCATGGCTTTCCCTGGAG +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELELSLAL*AWLSLE
Trigger: CTCCAGGGAAAGCCATGCTCACAGTGCCAGCGAGAG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCTCCTCTATCCGGCACTaGCGACTCCAGGTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLSSIRH*RLQVPA
Trigger: GGCAGGCACCTGGAGTCGTCAGTGCCGGATAGAGGA...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTAAGTCGGAGGCGGTCTaGTGTGGCACCTCTCGGGTG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIKSEAV*CGTSRV
Trigger: CACCCGAGAGGTGCCACATCAGACCGCCTCCGACTT...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATGGCCGGCTGCGGGGCTaGGAGTGCCACCAGCAGGCG +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYGRLRG*ECHQQA
Trigger: CGCCTGCTGGTGGCACTCTCAGCCCCGCAGCCGGCC...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACCGCCCGGCTCTCTGGTaGAGTTTTGTGGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDRPALW*SFVGFR
Trigger: TCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCG...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR GCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGAGGCAGAGGGTCTGGTaGATCTTGAGCCGACAGGGT +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLRQRVW*ILSRQG
Trigger: ACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCT...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGTACACCTCGGAAGCTaGCCAGGTAGACGACGGGGG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLVHLGS*PGRRRG
Trigger: CCCCCGTCGTCTACCTGGGCAGCTTCCGAGGTGTAC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTGAGGGTTTTTCTTTGTaGACAGCCTTCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILEGFSL*TAFSSG
Trigger: CCCGGAGGAGAAGGCTGTGCACAAAGAAAAACCCTC...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCCGGAACACTTCCCCTaGTCCCAGCACGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLPEHFP*SQHVGE
Trigger: CTCACCCACGTGCTGGGAGCAGGGGAAGTGTTCCGG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGCTGCAGAGTCAGGGCTaGTCAGGTAGATCGTCCGAT +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWLQSQG*SGRSSD
Trigger: ATCGGACGATCTACCTGAGCAGCCCTGACTCTGCAG...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTCTGGAGCTCAGCCCCTaGCCAGCCGAAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHILELSP*PAEVSS
Trigger: AGAGGAGACTTCGGCTGGGCAGGGGCTGAGCTCCAG...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTGCAGCTGAAGCTGGGTaGTCCCGGTGGAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIAAEAG*SRWRLD
Trigger: GTCAAGCCTCCACCGGGAGCACCCAGCTTCAGCTGC...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACGGGCACGGACGGGCTaGAGTAGGAGACTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMERARTG*SRRLFW
Trigger: CCAAAACAGTCTCCTACTGCAGCCCGTCCGTGCCCG...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGATGCTGGATGTTAAAGTaGACGGGCACGGACGGGCTG +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARCWMLK*TGTDGL
Trigger: CAGCCCGTCCGTGCCCGTGCACTTTAACATCCAGCA...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAAGTGGCCGCAGTCCTaGTGGATGTTAAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILKWPQS*WMLKCT
Trigger: CGTGCACTTTAACATCCAGCAGGACTGCGGCCACTT...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAGCCCGTTGCAGAGTTaGAGAAGCAGGAAGCACACG +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRSPLQS*RSRKHT
Trigger: CGTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCT...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGCCTGGCTCTTCTTCTaGTGCAGGTTTGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGAWLFF*CRFGVP
Trigger: CGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCTCCAGTTGTGCAGCGTaGCGCACAGCGCCTCCTCCG +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVSSCAA*RTAPPP
Trigger: CGGAGGAGGCGCTGTGCGGCACGCTGCACAACTGGA...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTTTGGCTCACAGAAGCTaGAGGAGCTTCAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILLAHRS*RSFSDC
Trigger: ACAGTCGCTGAAGCTCCTGCAGCTTCTGTGAGCCAA...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGCTTCGGCACTCAGGTTaGCCTCTGTCCACACATCAG +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRLRHSG*PLSTHQ
Trigger: CTGATGTGTGGACAGAGGCCAACCTGAGTGCCGAAG...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGGGAAGCTCACCGGGTaGAAGGCAATGTTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLGKLTG*KAMFLS
Trigger: CGAGAGGAACATTGCCTTCCACCCGGTGAGCTTCCC...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTAGGATGGGTGGGCAGTaGGGCCCTGGCTACAGCACT +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIRMGGQ*GPGYST
Trigger: AGTGCTGTAGCCAGGGCCCCACTGCCCACCCATCCT...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGCCAGATGCTGCTTTCTaGGCCCAGGCATTACCTGTG +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWPDAAF*AQALPV
Trigger: CACAGGTAATGCCTGGGCCCAGAAAGCAGCATCTGG...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGATGGTCCTCTTCCGGGTaGGCCGCCATGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGWSSSG*AAMTVM
Trigger: CATCACAGTCATGGCGGCCCACCCGGAAGAGGACCA...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAATGGTCCTCTTCCGGGTaGGCCGCCATGACTGTGATG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEWSSSG*AAMTVM
Trigger: CATCACAGTCATGGCGGCCCACCCGGAAGAGGACCA...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGTGGGCTTGCTCTCGCTaGCACTGTGAGCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQWACSR*HCEHGF
Trigger: AAAGCCATGCTCACAGTGCCAGCGAGAGCAAGCCCA...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGGACGGTGCCAGGTCGTaGAGTTTGAATGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEDGARS*SLNGPW
Trigger: CCACGGACCATTCAAACTCCACGACCTGGCACCGTC...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGGACACCCCTGAAGGATaGGCTGAGGCTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGDTPEG*AEAFCR
Trigger: TCTGCAGAAAGCCTCAGCCCATCCTTCAGGGGTGTC...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGGCTTCTTCCCGCTGTTaGTGGGCGAGTGAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRASSRC*WASEPA
Trigger: AGCTGGCTCACTCGCCCACCAACAGCGGGAAGAAGC...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGAGGAGAAGACAGGATaGTGGCGGTTCCCGGGGCTC +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLEEKTG*WRFPGL
Trigger: GAGCCCCGGGAACCGCCACCATCCTGTCTTCTCCTC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGGCTGCCGGAAGCCAGTaGCCACTGCCTTTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEAAGSQ*PLPLKA
Trigger: AGCTTTCAAAGGCAGTGGCCACTGGCTTCCGGCAGC...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCACCGAGGCGACGAAGTaGCCGCAGTCCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLTEATK*PQSCWM
Trigger: CATCCAGCAGGACTGCGGCCACTTCGTCGCCTCGGT...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCACTGCAGCACGCGCTTaGCCTCGCCGATGCGGATAC +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLTAARA*PRRCGY
Trigger: GTATCCGCATCGGCGAGGCCAAGCGCGTGCTGCAGT...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGGAGAGGAGACGAGTGTaGACGGGCAACAGCATCCTT +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGERRRV*TGNSIL
Trigger: AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTC...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAGAGGGCGAGCACCTTTaGTCACTGTCATCCTCCGAG +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELEEGEHL*SLSSSE
Trigger: CTCGGAGGATGACAGTGATCAAAGGTGCTCGCCCTC...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGGGCAGGTTCCTTCATaGGGGAGCAGTAATCACTCT +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQGQVPS*GSSNHS
Trigger: AGAGTGATTACTGCTCCCTCATGAAGGAACCTGCCC...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACCAGGTCGTGGAGTTTaGATGGTCCGTGGGGCCATT +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELEPGRGV*MVRGAI
Trigger: AATGGCCCCACGGACCATTCAAACTCCACGACCTGG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTCTTGAGCCGACAGGGTaGTGGTTCATCTTGCGCCCG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHILEPTG*WFILRP
Trigger: CGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAG...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR GCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGACGTCTCCAGATGACCTaGGAGACTTCGGCACTCAGG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGRLQMT*ETSALR
Trigger: CCTGAGTGCCGAAGTCTCGCAGGTCATCTGGAGACG...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCAGCCAGGGTCCTGCTaGTTCTCTGGGGCAGGTTCC +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVQPGSC*FSGAGS
Trigger: GGAACCTGCCCCAGAGAAGCAGCAGGACCCTGGCTG...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAGTGGGGTGGAGACGGTaGCAGGTCGTGGAGTTTGAA +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELEVGWRR*QVVEFE
Trigger: TTCAAACTCCACGACCTGGCACCGTCTCCACCCCAC...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTCAAAAGAGGCGGATTTaGTCATCCCGGTCCCAACTT +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILQKRRI*SSRSQL
Trigger: AAGTTGGGACCGGGATGAGCAAATCCGCCTCTTTTG...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGTTCAGCTTGGGGCTTaGTGTTCCGGGCTTGGGGGA +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLVQLGA*CSGLGG
Trigger: TCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAAC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTTGGGCTCAGGGGCTTTaGAGATTTTCACAGCATAGG +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILWAQGL*RFSQHR
Trigger: CCTATGCTGTGAAAATCTGCAAAGCCCCTGAGCCCA...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCGGGCACGGACGGGCTaGAGTAGGAGACTGTTTTGG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLRARTG*SRRLFW
Trigger: CCAAAACAGTCTCCTACTGCAGCCCGTCCGTGCCCG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGTGCCGCCCGGCTTCTaGTTGGCCTTCAAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLVPPGF*LAFKKL
Trigger: CAACTTTTTGAAGGCCAAGCAGAAGCCGGGCGGCAC...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTGCCTGGCTCTTCTTCTaGTGCAGGTTTGGGGTGCCG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIAWLFF*CRFGVP
Trigger: CGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGC...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCATGTCGATCCAGTTGTaGAGCGTGCCGCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLMSIQL*SVPHSA
Trigger: GGCGCTGTGCGGCACGCTGCACAACTGGATCGACAT...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGTTGGCTCACAGAAGCTaGAGGAGCTTCAGCGACTGT +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWLAHRS*RSFSDC
Trigger: ACAGTCGCTGAAGCTCCTGCAGCTTCTGTGAGCCAA...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACCAGGGAGACATGGGTaGTTCCAAGGCGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEPGRHG*FQGETG
Trigger: TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGG...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATCAGAGCGGCTTCCTCTaGGCTGCGCTCCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYQSGFL*AALPRP
Trigger: GGGCCGGGGGAGCGCAGCCCAGAGGAAGCCGCTCTG...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGGAGCTCATCATGGTaGGCTTCACGGCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRRSSSW*ASRQLW
Trigger: CCACAATTGCCGTGAAGCCCACCATGATGAGCTCCG...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGGGGAAGCTCACCGGGTaGAAGGCAATGTTCCTCTCG +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRGKLTG*KAMFLS
Trigger: CGAGAGGAACATTGCCTTCCACCCGGTGAGCTTCCC...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTCCTGCTCCCAGCACGTaGGTGAGCAGTCCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTPAPST*VSSPCH
Trigger: GTGGCAGGGACTGCTCACCCACGTGCTGGGAGCAGG...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACAGGACGAAGGGGCTACTaGCGCCGCTGCCGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITGRRGY*RRCRCR
Trigger: GCGGCAGCGGCAGCGGCGCCAGTAGCCCCTTCGTCC...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAATCTTGGCCTGTGACTTaGAAGGCACCGGAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELESWPVT*KAPELP
Trigger: AGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGA...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTTGGCGGGCCTCTCCTTaGGCTTGCTCTCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTWRASP*ACSRWH
Trigger: GTGCCAGCGAGAGCAAGCCCAAGGAGAGGCCCGCCA...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAGACACCCCTGAAGGATaGGCTGAGGCTTTCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARDTPEG*AEAFCR
Trigger: TCTGCAGAAAGCCTCAGCCCATCCTTCAGGGGTGTC...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGACGTTGGTTTCCGAGTaGCTTAGGTTCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRTLVSE*LRFSLG
Trigger: CCCCAAGCTGAACCTAAGCCACTCGGAAACCAACGT...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTCTGGACACGCTCAGCTaGGAGGATGAGGCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTLDTLS*EDEAEG
Trigger: CCCCTCCGCCTCATCCTCCCAGCTGAGCGTGTCCAG...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGATGGAGCTCCTTTTTCTaGCCGCCCATGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGWSSFF*PPMKRS
Trigger: GGACCTCTTCATGGGCGGCCAGAAAAAGGAGCTCCA...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTTGGCACAGTAATAAATaGCATCCCCCGAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: QGGLSAERRRVWTGNSILWHSNK*HPPSHS
Trigger: GCTGTGACTCGGGGGATGCCATTTATTACTGTGCCA...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTGCACCTCGAACGGGTTaGGTTGGTGCAGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIAPRTG*VGAAAR
Trigger: ACGAGCTGCTGCACCAACCCAACCCGTTCGAGGTGC...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTCCAGGTCGTGGAGTTTaGATGGTCCGTGGGGCCATT +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIPGRGV*MVRGAI
Trigger: AATGGCCCCACGGACCATTCAAACTCCACGACCTGG...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGTCCTCAGTGGAGCCTaGAGGAAACGGAACGGGAGC +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVVLSGA*RKRNGS
Trigger: GCTCCCGTTCCGTTTCCTTCAGGCTCCACTGAGGAC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGTTTTCTGGCCGCCCATaGAGAGGTCCTCACATTTGG +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEFSGRP*RGPHIW
Trigger: CCAAATGTGAGGACCTCTTCATGGGCGGCCAGAAAA...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGTGTTCGCAGAAGGTCTaGGCGCGGTGCGTGCCCGGC +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMCSQKV*ARCVPG
Trigger: GCCGGGCACGCACCGCGCGCAGACCTTCTGCGAACA...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR GCA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCCGGGTTTCCAGATGTaGTCCACAAAGTCACTGCAC +
Preference number: 4 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRPGFQM*STKSLH
Trigger: GTGCAGTGACTTTGTGGAGCACATCTGGAAACCCGG...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGCCAACTTTGCTGTTCTaGCCAGAGGAGCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEPTLLF*PEEPSV
Trigger: CACAGATGGCTCCTCTGGGCAGAACAGCAAAGTTGG...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCAAAAGAGGCGGATTTaGTCATCCCGGTCCCAACTT +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQQKRRI*SSRSQL
Trigger: AAGTTGGGACCGGGATGAGCAAATCCGCCTCTTTTG...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCTGGCTCTTCTTCTGCTaGAGGTTTGGGGTGCCGCCC +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVWLFFC*RFGVPP
Trigger: GGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCA...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGGGAACTCATCGAACTTaGGGTACTGGGAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGGTHRT*GTGKQT
Trigger: TGTCTGCTTCCCAGTACCGCAAGTTCGATGAGTTCC...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATGCGCCTCCTCCGAGGTaGCCGGCTGCTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYAPPPR*PAAAPA
Trigger: AGCTGGTGCAGCAGCCGGGCACCTCGGAGGAGGCGC...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGGGCCAGTGTCCAGGCTaGATTCAGTTCACAGAACTG +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEGQCPG*IQFTEL
Trigger: CAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCC...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAGCTTCACGGCAATTGTaGGCTTGGAGTAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARASRQL*AWSKVS
Trigger: GCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGC...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACGGAGCTCATCATGGTaGGCTTCACGGCAATTGTGG +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELERSSSW*ASRQLW
Trigger: CCACAATTGCCGTGAAGCCCACCATGATGAGCTCCG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGCCTCGGAGCTCATCATaGTGGGCTTCACGGCAATTG +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRPRSSS*WASRQL
Trigger: CAATTGCCGTGAAGCCCACCATGATGAGCTCCGAGG...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGGACCATGGTGTAAGCTaGGGGACAGCGAGAATTGCC +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRDHGVS*GTARIA
Trigger: GGCAATTCTCGCTGTCCCCCAGCTTACACCATGGTC...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATTCTGGGAGGCAGCCTTaGCAACAGGGCTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYSGRQP*QQGSQG
Trigger: GCCCTGGGAGCCCTGTTGCCAAGGCTGCCTCCCAGA...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCTGCCTTCTTCCTCTTaGTGCTCTCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQLPSSS*CSQHRW
Trigger: CCATCTATGCTGAGAGCACCAAGAGGAAGAAGGCAG...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTTACCTGTGCATACCTaGCCTTGGCCCTGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHILPVHT*PWPWAA
Trigger: TGCTGCCCAGGGCCAAGGCCAGGTATGCACAGGTAA...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGACCAGATGCTGCTTTCTaGGCCCAGGCATTACCTGTG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGPDAAF*AQALPV
Trigger: CACAGGTAATGCCTGGGCCCAGAAAGCAGCATCTGG...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTCTGGGGACACCTGGATaGGTCACTGATAGCGACACC +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHILGTPG*VTDSDT
Trigger: GGTGTCGCTATCAGTGACCCATCCAGGTGTCCCCAG...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATCTCCAGGTGCCTGCCTaGAACCTGGGCCGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYLQVPA*NLGRLC
Trigger: ACAGAGGCGGCCCAGGTTCCAGGCAGGCACCTGGAG...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGTGGTGAAGCTGACGTaGACACCCCTGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLVVKLT*TPLKDG
Trigger: CCCATCCTTCAGGGGTGTCCACGTCAGCTTCACCAC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGGAGGCGGTCTGATGTaGCACCTCTCGGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVGGGLM*HLSGDD
Trigger: GTCATCACCCGAGAGGTGCCACATCAGACCGCCTCC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGCTCCCAGCACGTGGGTaGGCAGTCCCTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMLPARG*AVPATM
Trigger: CATGGTGGCAGGGACTGCTCACCCACGTGCTGGGAG...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAATTTTCTGGCCGCCCATaGAGAGGTCCTCACATTTGG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEFSGRP*RGPHIW
Trigger: CCAAATGTGAGGACCTCTTCATGGGCGGCCAGAAAA...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGAGGGTTTTTCTTTGTaGACAGCCTTCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGEGFSL*TAFSSG
Trigger: CCCGGAGGAGAAGGCTGTGCACAAAGAAAAACCCTC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGCCCTGGGCAGCAGCTaGATGTTCTATCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVALGSS*MFYLGL
Trigger: CAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGGAACTCATCGAACTTaGGGTACTGGGAAGCAGACA +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLGTHRT*GTGKQT
Trigger: TGTCTGCTTCCCAGTACCGCAAGTTCGATGAGTTCC...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGGCCAGTGTCCAGGCTaGATTCAGTTCACAGAACTG +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGGQCPG*IQFTEL
Trigger: CAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTTCAGGCAGAGGGTCTaGTGCATCTTGAGCCGACAG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIFRQRV*CILSRQ
Trigger: CTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAA...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGGCAATTGTGGGCTTaGAGTAAGGTGAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARRQLWA*SKVSCS
Trigger: TGAACAGCTCACCTTACTCCAAGCCCACAATTGCCG...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACAGCTCACAGGCCCTCGTaGCCACTGCACCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITAHRPS*PLHPHC
Trigger: GCAGTGGGGGTGCAGTGGCCACGAGGGCCTGTGAGC...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCTACTCTTGGACAACTTaGGGGGAATGGCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLYSWTT*GEWRAS
Trigger: AGAGGCCCGCCATTCCCCCCAAGTTGTCCAAGAGTA...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGTGCCTGCCTGGAACCTaGGCCGCCTCTGTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMCLPGT*AASVPR
Trigger: CCTCGGAACAGAGGCGGCCCAGGTTCCAGGCAGGCA...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGTGGTGAAGCTGACGTaGACACCCCTGAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVVVKLT*TPLKDG
Trigger: CCCATCCTTCAGGGGTGTCCACGTCAGCTTCACCAC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTTCTTCCCGCTGTTGGTaGGCGAGTGAGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTSSRCW*ASEPAQ
Trigger: CTGAGCTGGCTCACTCGCCCACCAACAGCGGGAAGA...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGGGACACGTCCTCAGTaGAGCCTGAAGGAAACGGAA +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLGTRPQ*SLKETE
Trigger: TTCCGTTTCCTTCAGGCTCCACTGAGGACGTGTCCC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGTTTCCGAGTaGCTTAGGTTCAGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRTLVSE*LRFSLG
Trigger: CCCCAAGCTGAACCTAAGCCACTCGGAAACCAACGT...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGATTCGTCGTGGACGTTaGTTTCCGAGTGGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEIRRGR*FPSGLG
Trigger: ACCTAAGCCACTCGGAAACCAACGTCCACGACGAAT...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGCTGCCGGAAGCCAGTaGCCACTGCCTTTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVAAGSQ*PLPLKA
Trigger: AGCTTTCAAAGGCAGTGGCCACTGGCTTCCGGCAGC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAGTAGGAGACTGTTTTaGGCTCAGGGGCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGESRRLF*AQGLCR
Trigger: TCTGCAAAGCCCCTGAGCCCAAAACAGTCTCCTACT...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAATCGAACTTGCGGTACTaGGAAGCAGACACGATCTCG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMESNLRY*EADTIS
Trigger: CGAGATCGTGTCTGCTTCCCAGTACCGCAAGTTCGA...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTGCAGGCTGGGGCTTaGCTCACAGAAGCTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTVQAGA*LTEAAG
Trigger: TCCTGCAGCTTCTGTGAGCCAAGCCCCAGCCTGCAC...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTTTCCCAGGGAGACATaGGTGCTTCCAAGGCGAGAC +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIFPRET*VLPRRD
Trigger: GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAA...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTGGGCTTGGAGTAAGGTaGGCTGTTCACACCTTCATC +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIGLGVR*AVHTFI
Trigger: GATGAAGGTGTGAACAGCTCACCTTACTCCAAGCCC...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGGGCAGGTTCCTTCATaGGGGAGCAGTAATCACTCT +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLGQVPS*GSSNHS
Trigger: AGAGTGATTACTGCTCCCTCATGAAGGAACCTGCCC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATAGGAGACCGTGCAGCTaGAGCTGGGTGCTCCCGGTG +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYRRPCS*SWVLPV
Trigger: CACCGGGAGCACCCAGCTTCAGCTGCACGGTCTCCT...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACATCGGGAGGGGGAGCTTaGCAGGGGCTCGTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITSGGGA*QGLVSR
Trigger: TCTGGAGACGAGCCCCTGGCAAGCTCCCCCTCCCGA...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATCCTGCCCCGGGAACCTaGAGTCTGGGAGGCAGCCTT +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYPAPGT*SLGGSL
Trigger: AAGGCTGCCTCCCAGACTGCAGGTTCCCGGGGCAGG...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACACCCTGCCACCATGCCTaGCCCGGGAACCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITPCHHA*PGNLQS
Trigger: AGACTGCAGGTTCCCGGGGCAGGCATGGTGGCAGGG...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATCAGTCCCTGCCACCATaGCTGCCCCGGGAACCTGCA +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYQSLPP*LPREPA
Trigger: TGCAGGTTCCCGGGGCAGGCATGGTGGCAGGGACTG...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATGGGCAGCCAGGGTCCTaGTGCTTCTCTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYGQPGS*CFSGAG
Trigger: ACCTGCCCCAGAGAAGCAGCAGGACCCTGGCTGCCC...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCCTTCTTCCTCTTGGTaGTCTCAGCATAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLPSSSW*SQHRWV
Trigger: AACCCATCTATGCTGAGAGCACCAAGAGGAAGAAGG...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGACCTTCTTCCTCTTGGTaGTCTCAGCATAGATGGGTT +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGPSSSW*SQHRWV
Trigger: AACCCATCTATGCTGAGAGCACCAAGAGGAAGAAGG...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGCCACTGCACCCCCACTaGAGAGTCAGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMPLHPH*RVRAAQ
Trigger: CTGAGCAGCCCTGACTCTGCAGTGGGGGTGCAGTGG...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCCAACTTTGCTGTTCTaGCCAGAGGAGCCATCTGTG +
Preference number: 4 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLPTLLF*PEEPSV
Trigger: CACAGATGGCTCCTCTGGGCAGAACAGCAAAGTTGG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGCAGCTGAAGCTGGGTaGTCCCGGTGGAGGCTTGAC +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMAAEAG*SRWRLD
Trigger: GTCAAGCCTCCACCGGGAGCACCCAGCTTCAGCTGC...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATTCACAGCATAGGTGCTaGCGGGGTCCTCAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYSQHRC*RGPQSR
Trigger: CCTGCTCTGAGGACCCCGGCAGCACCTATGCTGTGA...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGTGGGCTCAGGGGCTTTaGAGATTTTCACAGCATAGG +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRWAQGL*RFSQHR
Trigger: CCTATGCTGTGAAAATCTGCAAAGCCCCTGAGCCCA...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTAAGTGGCCGCAGTCCTaGTGGATGTTAAAGTGCACG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIKWPQS*WMLKCT
Trigger: CGTGCACTTTAACATCCAGCAGGACTGCGGCCACTT...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGTGCCGCCCGGCTTCTaGTTGGCCTTCAAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVVPPGF*LAFKKL
Trigger: CAACTTTTTGAAGGCCAAGCAGAAGCCGGGCGGCAC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCTGTGGGATTCAGAGGTaGGTCACAGAGCGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVCGIQR*VTERLP
Trigger: AGGAAGCCGCTCTGTGACCCACCTCTGAATCCCACA...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAATCTGGTGCAGTTTTGTaGGATTCAGAGGTGGGTCAC +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELESGAVL*DSEVGH
Trigger: GTGACCCACCTCTGAATCCCACAAAACTGCACCAGA...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTGCTTCACGGCAATTGTaGGCTTGGAGTAAGGTGAGC +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHIASRQL*AWSKVS
Trigger: GCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGC...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCCTCGGAGCTCATCATaGTGGGCTTCACGGCAATTG +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVPRSSS*WASRQL
Trigger: CAATTGCCGTGAAGCCCACCATGATGAGCTCCGAGG...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACTGCATGTTCTATCTTaGCCTGTGACTTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IPVICTISQGDMGASKARLHVLS*PVTWKA
Trigger: TGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAG...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATTGGCGGGCCTCTCCTTaGGCTTGCTCTCGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYWRASP*ACSRWH
Trigger: GTGCCAGCGAGAGCAAGCCCAAGGAGAGGCCCGCCA...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCTACTCTTGGACAACTTaGGGGGAATGGCGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVYSWTT*GEWRAS
Trigger: AGAGGCCCGCCATTCCCCCCAAGTTGTCCAAGAGTA...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACACCTTGGGATGGAGGCTaGGGCCCAATGCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITPWDGG*GPMLLP
Trigger: CGGCAGCAGCATTGGGCCCCAGCCTCCATCCCAAGG...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACATGCCTGCCTGGAACCTaGGCCGCCTCTGTTCCGAGG +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITCLPGT*AASVPR
Trigger: CCTCGGAACAGAGGCGGCCCAGGTTCCAGGCAGGCA...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAGTTTGAATGGTCCGTaGGGCCATTTTTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGSLNGP*GHFWSL
Trigger: GAGAGACCAAAAATGGCCCCACGGACCATTCAAACT...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGAGTTTGAATGGTCCGTaGGGCCATTTTTGGTCTCTC +
Preference number: 4 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLSLNGP*GHFWSL
Trigger: GAGAGACCAAAAATGGCCCCACGGACCATTCAAACT...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAAGTCGTGGAGTTTGAATaGTCCGTGGGGCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEVVEFE*SVGPFL
Trigger: CAAAAATGGCCCCACGGACCATTCAAACTCCACGAC...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCTTTCTGCAGAGCCCTaGCTCACTTTTTCCAAATCA +
Preference number: 4 (lower is better)
Translates to: PVICTISQGDMGASKARQLSAEP*LTFSKS
Trigger: TGATTTGGAAAAAGTGAGCCAGGGCTCTGCAGAAAG...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGATGGCACAGTAATAAATaGCATCCCCCGAGTCACAGC +
Preference number: 4 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGWHSNK*HPPSHS
Trigger: GCTGTGACTCGGGGGATGCCATTTATTACTGTGCCA...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGGGTCCTCAGAGCAGGTaGCACAGTAATAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEGPQSR*HSNKWH
Trigger: ATGCCATTTATTACTGTGCCACCTGCTCTGAGGACC...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAGGCACAGGTCCCGGTaGATGATCCCGTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYRHRSR*MIPCSF
Trigger: GAAGGAGCACGGGATCATCCACCGGGACCTGTGCCT...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTCGAACTTGCGGTACTaGGAAGCAGACACGATCTCG +
Preference number: 4 (lower is better)
Translates to: VQRGDECGRATASLVFHISNLRY*EADTIS
Trigger: CGAGATCGTGTCTGCTTCCCAGTACCGCAAGTTCGA...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGACTGTGATGGTGGCTaGCACCTGGGGAGTTGGGTC +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMDCDGG*HLGSWV
Trigger: GACCCAACTCCCCAGGTGTCAGCCACCATCACAGTC...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATGCAGGTCCTAGAGTCTaGGGCCAGGCTGTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYAGPRV*GQAVRG
Trigger: TCCACGGACAGCCTGGCCTCAGACTCTAGGACCTGC...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATCCGGAACACTTCCCCTaGTCCCAGCACGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYPEHFP*SQHVGE
Trigger: CTCACCCACGTGCTGGGAGCAGGGGAAGTGTTCCGG...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGCCTCTCCTTGGGCTTaGTCTCGCTGGCACTGTGAG +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMASPWA*SRWHCE
Trigger: CTCACAGTGCCAGCGAGAGCAAGCCCAAGGAGAGGC...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGATGTCGATCCAGTTGTaGAGCGTGCCGCACAGCGCC +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMMSIQL*SVPHSA
Trigger: GGCGCTGTGCGGCACGCTGCACAACTGGATCGACAT...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACTGTCCTCAGGACGTTaGATGGAACTGGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: PGCIQFTELSSGRCMELELSSGR*MELEMC
Trigger: ACACATTTCCAGTTCCATGCAACGTCCTGAGGACAG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAAGGCAGCCAGTTTCTaGCGGAAGCTCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYKAASF*RKLSWV
Trigger: CACCCAGGAGAGCTTCCGCCAGAAACTGGCTGCCTT...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATGTGCATACCTGGCCTTaGCCCTGGGCAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYVHTWP*PWAAAA
Trigger: TGCAGCTGCTGCCCAGGGCCAAGGCCAGGTATGCAC...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGAGCAGGACCTTGGGATaGAGGCTGGGGCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMSRTLG*RLGPNA
Trigger: AGCATTGGGCCCCAGCCTCCATCCCAAGGTCCTGCT...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAATCCCACTTCTGTCCTTaGGGAACTCAAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMESHFCP*GTQRQK
Trigger: CTTTTGCCTTTGAGTTCCCCAAGGACAGAAGTGGGA...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGCTTTCTGCAGAGCCCTaGCTCACTTTTTCCAAATCA +
Preference number: 4 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGELSAEP*LTFSKS
Trigger: TGATTTGGAAAAAGTGAGCCAGGGCTCTGCAGAAAG...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGTTATTCTCATTGAAGTaGAGCTCCTTTTTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWLFSLK*SSFFWP
Trigger: CGGCCAGAAAAAGGAGCTCCACTTCAATGAGAATAA...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAAGGTCCTCAGAGCAGGTaGCACAGTAATAAATGGCAT +
Preference number: 4 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEGPQSR*HSNKWH
Trigger: ATGCCATTTATTACTGTGCCACCTGCTCTGAGGACC...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGAGGCGGTCTGATGTaGCACCTCTCGGGTGATGAC +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMGGGLM*HLSGDD
Trigger: GTCATCACCCGAGAGGTGCCACATCAGACCGCCTCC...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATCGATGCGGATACGCTTaGTGGGGTCGGCCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYRCGYA*WGRPPV
Trigger: TACTGGAGGCCGACCCCATCAAGCGTATCCGCATCG...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACATGTGCAGGCCGACCATaGTGTAAGCTGGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITCAGRP*CKLGDS
Trigger: GCTGTCCCCCAGCTTACACCATGGTCGGCCTGCACA...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATGGAAGCTCTCCTGGGTaGAGGGCCGGTCTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYGSSPG*RAGLGK
Trigger: CTTACCAAGACCGGCCCTCCACCCAGGAGAGCTTCC...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATCGGGAACCTGCAGTCTaGGAGGCAGCCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYREPAV*EAALAT
Trigger: TGTTGCCAAGGCTGCCTCCCAGACTGCAGGTTCCCG...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACACGGGAACCTGCAGTCTaGGAGGCAGCCTTGGCAACA +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITREPAV*EAALAT
Trigger: TGTTGCCAAGGCTGCCTCCCAGACTGCAGGTTCCCG...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACAAGCAGGACCTTGGGATaGAGGCTGGGGCCCAATGCT +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITSRTLG*RLGPNA
Trigger: AGCATTGGGCCCCAGCCTCCATCCCAAGGTCCTGCT...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATTCTTCCCGCTGTTGGTaGGCGAGTGAGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYSSRCW*ASEPAQ
Trigger: CTGAGCTGGCTCACTCGCCCACCAACAGCGGGAAGA...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATGGGACACGTCCTCAGTaGAGCCTGAAGGAAACGGAA +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYGTRPQ*SLKETE
Trigger: TTCCGTTTCCTTCAGGCTCCACTGAGGACGTGTCCC...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACATTGCTGTTCCGGGCTTaGGGGAGCCTTGGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITLLFRA*GSLGSR
Trigger: TCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAA...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR TCA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGTGTTACAAGTCAGCTTaGAGAGCGACCAGTTATTCT +
Preference number: 4 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRCYKSA*RATSYS
Trigger: AGAATAACTGGTCGCTCTTCAAGCTGACTTGTAACA...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGCTCCACAAAGTCACTaGACGCAGACATTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTAPQSH*TQTFSG
Trigger: GCCTGAAAATGTCTGCGTGCAGTGACTTTGTGGAGC...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACAGCCCTGGGCAGCAGCTaGATGTTCTATCTTGGCCTG +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITALGSS*MFYLGL
Trigger: CAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGC...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTGTCCTCAGGACGTTaGATGGAACTGGAAATGTGT +
Preference number: 4 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVLSSGR*MELEMC
Trigger: ACACATTTCCAGTTCCATGCAACGTCCTGAGGACAG...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGCTTCGGCACTCAGGTTaGCCTCTGTCCACACATCAG +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMLRHSG*PLSTHQ
Trigger: CTGATGTGTGGACAGAGGCCAACCTGAGTGCCGAAG...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACAAAGGCAGCCAGTTTCTaGCGGAAGCTCTCCTGGGTG +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITKAASF*RKLSWV
Trigger: CACCCAGGAGAGCTTCCGCCAGAAACTGGCTGCCTT...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACATCTTGGCCTGTGACTTaGAAGGCACCGGAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITSWPVT*KAPELP
Trigger: AGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGA...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATGCTCCACAAAGTCACTaGACGCAGACATTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYAPQSH*TQTFSG
Trigger: GCCTGAAAATGTCTGCGTGCAGTGACTTTGTGGAGC...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACACTGCAGAGTCAGGGCTaGTCAGGTAGATCGTCCGAT +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITLQSQG*SGRSSD
Trigger: ATCGGACGATCTACCTGAGCAGCCCTGACTCTGCAG...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATTTTTCACAGCATAGGTaGTGCCGGGGTCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYFSQHR*CRGPQS
Trigger: GCTCTGAGGACCCCGGCAGCACCTATGCTGTGAAAA...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR GCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATAGCCCGTTGCAGAGTTaGAGAAGCAGGAAGCACACG +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYSPLQS*RSRKHT
Trigger: CGTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCT...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATTTGCGCCCGGCTCTCTaGTGCAGTTTTGTGGGATTC +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYLRPAL*CSFVGF
Trigger: GAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAA...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACATGGGCTTGCTCTCGCTaGCACTGTGAGCATGGCTTT +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITWACSR*HCEHGF
Trigger: AAAGCCATGCTCACAGTGCCAGCGAGAGCAAGCCCA...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATGTCGTGGAGTTTGAATaGTCCGTGGGGCCATTTTTG +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYVVEFE*SVGPFL
Trigger: CAAAAATGGCCCCACGGACCATTCAAACTCCACGAC...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTTCCCACTTCTGTCCTTaGGGAACTCAAAGGCAAAAG +
Preference number: 4 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTSHFCP*GTQRQK
Trigger: CTTTTGCCTTTGAGTTCCCCAAGGACAGAAGTGGGA...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATATTCGTCGTGGACGTTaGTTTCCGAGTGGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYIRRGR*FPSGLG
Trigger: ACCTAAGCCACTCGGAAACCAACGTCCACGACGAAT...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACATGGAGCTCCTTTTTCTaGCCGCCCATGAAGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITWSSFF*PPMKRS
Trigger: GGACCTCTTCATGGGCGGCCAGAAAAAGGAGCTCCA...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGCTGCCTTCTTCCTCTTaGTGCTCTCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: YILHPGIPVICTISQGDMLPSSS*CSQHRW
Trigger: CCATCTATGCTGAGAGCACCAAGAGGAAGAAGGCAG...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACACGGCAATTGTGGGCTTaGAGTAAGGTGAGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITRQLWA*SKVSCS
Trigger: TGAACAGCTCACCTTACTCCAAGCCCACAATTGCCG...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTTTATTCTCATTGAAGTaGAGCTCCTTTTTCTGGCCG +
Preference number: 4 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTLFSLK*SSFFWP
Trigger: CGGCCAGAAAAAGGAGCTCCACTTCAATGAGAATAA...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACAAGTAGGAGACTGTTTTaGGCTCAGGGGCTTTGCAGA +
Preference number: 4 (lower is better)
Translates to: FTELSSGRCMELEMCIITSRRLF*AQGLCR
Trigger: TCTGCAAAGCCCCTGAGCCCAAAACAGTCTCCTACT...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CCA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATCTGCATGTTCTATCTTaGCCTGTGACTTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: DECGRATASLVFHIYIWYLHVLS*PVTWKA
Trigger: TGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAG...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
3UTR CAA 72 bp AGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTaGCATGGAACTGGAAATGTGTATAATTACAGAAGA +
Preference number: 4 (lower is better)
Translates to: RLHSVHRTVLRT*HGTGNVYNYRR
Trigger: TCTTCTGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp TTGTGCAGCGTGCCGCACAGCGCCTCCTCCGAGGTGCCCGGCTGCTaGACCAGCTCGCGCCGAGGCCCCCACAGCAGGCACTGCAGCACG +
Preference number: 5 (lower is better)
Translates to: LCSVPHSASSEVPGC*TSSRRGPHSRHCST
Trigger: CGTGCTGCAGTGCCTGCTGTGGGGGCCTCGGCGCGAGCTGGTGCAGCAGCCGGGCACCTCGGAGGAGGCGCTGTGCGGCACGCTGCACAA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CAGTTGTGCAGCGTGCCGCACAGCGCCTCCTCCGAGGTGCCCGGCTaGTGCACCAGCTCGCGCCGAGGCCCCCACAGCAGGCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: QLCSVPHSASSEVPG*CTSSRRGPHSRHCS
Trigger: GCTGCAGTGCCTGCTGTGGGGGCCTCGGCGCGAGCTGGTGCAGCAGCCGGGCACCTCGGAGGAGGCGCTGTGCGGCACGCTGCACAACTG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CCCGGCTGCTGCACCAGCTCGCGCCGAGGCCCCCACAGCAGGCACTaGAGCACGCGCTTGGCCTCGCCGATGCGGATACGCTTGATGGGG +
Preference number: 5 (lower is better)
Translates to: PGCCTSSRRGPHSRH*STRLASPMRIRLMG
Trigger: CCCCATCAAGCGTATCCGCATCGGCGAGGCCAAGCGCGTGCTGCAGTGCCTGCTGTGGGGGCCTCGGCGCGAGCTGGTGCAGCAGCCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GACACGCTCAGCTGGGAGGATGAGGCGGAGGGGGCCCCTTTGCACTaGAGGCCAGGGCTCCCGCAGCCGCCTCTGTTGCCCGCCAGCCCT +
Preference number: 5 (lower is better)
Translates to: DTLSWEDEAEGAPLH*RPGLPQPPLLPASP
Trigger: AGGGCTGGCGGGCAACAGAGGCGGCTGCGGGAGCCCTGGCCTCCAGTGCAAAGGGGCCCCCTCCGCCTCATCCTCCCAGCTGAGCGTGTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GGAAGCACACGCGCCGCTCGTACGCCTCGGGCTCCGCCTGGTGGCTaGCCGCCGAGTCCCGCACGAAGTCGGAGGCGGTCTGATGTGGCA +
Preference number: 5 (lower is better)
Translates to: GSTRAARTPRAPPGG*PPSPARSRRRSDVA
Trigger: TGCCACATCAGACCGCCTCCGACTTCGTGCGGGACTCGGCGGCCAGCCACCAGGCGGAGCCCGAGGCGTACGAGCGGCGCGTGTGCTTCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 90 bp GTGTGGGCAGGGCAGGCACAGGGTCCTTGGGCGCGTCGGGGGAGCTaGGCATGCTGGACGGCACCGAGGCGACGAAGTGGCCGCAGTCCT +
Preference number: 5 (lower is better)
Translates to: VWAGQAQGPWARRGS*ACWTAPRRRSGRSP
Trigger: AGGACTGCGGCCACTTCGTCGCCTCGGTGCCGTCCAGCATGCTCAGCTCCCCCGACGCGCCCAAGGACCCTGTGCCTGCCCTGCCCACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CTCGGGCCCCGCTTCTCCTGCTCTGCGGGCCCGGAACACTTCCCCTaGTCCCAGCACGTGGGTGAGCAGTCCCTGCCACCATGCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LGPRFSCSAGPEHFP*SQHVGEQSLPPCLP
Trigger: GGGCAGGCATGGTGGCAGGGACTGCTCACCCACGTGCTGGGAGCAGGGGAAGTGTTCCGGGCCCGCAGAGCAGGAGAAGCGGGGCCCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp GACTGGACACGCTCAGCTGGGAGGATGAGGCGGAGGGGGCCCCTTTaGACTGGAGGCCAGGGCTCCCGCAGCCGCCTCTGTTGCCCGCCA +
Preference number: 5 (lower is better)
Translates to: DWTRSAGRMRRRGPL*TGGQGSRSRLCCPP
Trigger: TGGCGGGCAACAGAGGCGGCTGCGGGAGCCCTGGCCTCCAGTGCAAAGGGGCCCCCTCCGCCTCATCCTCCCAGCTGAGCGTGTCCAGTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 90 bp GGTGCTCCCGGTGGAGGCTTGACTGGACACGCTCAGCTGGGAGGATaGGGCGGAGGGGGCCCCTTTGCACTGGAGGCCAGGGCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: GAPGGGLTGHAQLGG*GGGGPFALEARAPA
Trigger: TGCGGGAGCCCTGGCCTCCAGTGCAAAGGGGCCCCCTCCGCCTCATCCTCCCAGCTGAGCGTGTCCAGTCAAGCCTCCACCGGGAGCACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 90 bp GCCTGGTGGCTGGCCGCCGAGTCCCGCACGAAGTCGGAGGCGGTCTaGTGTGGCACCTCTCGGGTGATGACCACCACGCAGTCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: AWWLAAESRTKSEAV*CGTSRVMTTTQSCS
Trigger: GGAGCAGGACTGCGTGGTGGTCATCACCCGAGAGGTGCCACATCAGACCGCCTCCGACTTCGTGCGGGACTCGGCGGCCAGCCACCAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp TCCCCTGCTCCCAGCACGTGGGTGAGCAGTCCCTGCCACCATGCCTaGCCCGGGAACCTGCAGTCTGGGAGGCAGCCTTGGCAACAGGGC +
Preference number: 5 (lower is better)
Translates to: SPAPSTWVSSPCHHA*PGNLQSGRQPWQQG
Trigger: GCCCTGTTGCCAAGGCTGCCTCCCAGACTGCAGGTTCCCGGGGCAGGCATGGTGGCAGGGACTGCTCACCCACGTGCTGGGAGCAGGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp TCTCCTGCTCTGCGGGCCCGGAACACTTCCCCTGCTCCCAGCACGTaGGTGAGCAGTCCCTGCCACCATGCCTGCCCCGGGAACCTGCAG +
Preference number: 5 (lower is better)
Translates to: SPALRARNTSPAPST*VSSPCHHACPGNLQ
Trigger: CTGCAGGTTCCCGGGGCAGGCATGGTGGCAGGGACTGCTCACCCACGTGCTGGGAGCAGGGGAAGTGTTCCGGGCCCGCAGAGCAGGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GTGGCTGGCCGCCGAGTCCCGCACGAAGTCGGAGGCGGTCTGATGTaGCACCTCTCGGGTGATGACCACCACGCAGTCCTGCTCCTGGGC +
Preference number: 5 (lower is better)
Translates to: VAGRRVPHEVGGGLM*HLSGDDHHAVLLLG
Trigger: GCCCAGGAGCAGGACTGCGTGGTGGTCATCACCCGAGAGGTGCCACATCAGACCGCCTCCGACTTCGTGCGGGACTCGGCGGCCAGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp GAGGCCAGGGCTCCCGCAGCCGCCTCTGTTGCCCGCCAGCCCTGCTaGCGGAAGCCAGTGGCCACTGCCTTTGAAAGCTTTCTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: EARAPAAASVARQPC*RKPVATAFESFLQR
Trigger: CCTCTGGAGAAAGCTTTCAAAGGCAGTGGCCACTGGCTTCCGGCAGCAGGGCTGGCGGGCAACAGAGGCGGCTGCGGGAGCCCTGGCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CTGGAGGCCAGGGCTCCCGCAGCCGCCTCTGTTGCCCGCCAGCCCTaGTGCCGGAAGCCAGTGGCCACTGCCTTTGAAAGCTTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: LEARAPAAASVARQP*CRKPVATAFESFLQ
Trigger: CTGGAGAAAGCTTTCAAAGGCAGTGGCCACTGGCTTCCGGCAGCAGGGCTGGCGGGCAACAGAGGCGGCTGCGGGAGCCCTGGCCTCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GTGAGCTGTTCACACCTTCATCTTCCAGGCGGCAGTTCTCAGGCCTaGGAGGCAGGCGCGGTGGAGGGGGCAGGCTGCCCGCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: VSCSHLHLPGGSSQA*EAGAVEGAGCPLWA
Trigger: AGCCCAGAGCGGGCAGCCTGCCCCCTCCACCGCGCCTGCCTCCCAGGCCTGAGAACTGCCGCCTGGAAGATGAAGGTGTGAACAGCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp CTTCCTCTATCCGGCACTGACGACTCCAGGTGCCTGCCTGGAACCTaGGCCGCCTCTGTTCCGAGGCTGACGAGGCGGCAGGCTGGGGAC +
Preference number: 5 (lower is better)
Translates to: LPLSGTDDSRCLPGT*AASVPRLTRRQAGD
Trigger: GTCCCCAGCCTGCCGCCTCGTCAGCCTCGGAACAGAGGCGGCCCAGGTTCCAGGCAGGCACCTGGAGTCGTCAGTGCCGGATAGAGGAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GGAGACCGTGCAGCTGAAGCTGGGTGCTCCCGGTGGAGGCTTGACTaGACACGCTCAGCTGGGAGGATGAGGCGGAGGGGGCCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: GDRAAEAGCSRWRLD*TRSAGRMRRRGPLC
Trigger: GCAAAGGGGCCCCCTCCGCCTCATCCTCCCAGCTGAGCGTGTCCAGTCAAGCCTCCACCGGGAGCACCCAGCTTCAGCTGCACGGTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GCGTCGGGGGAGCTGAGCATGCTGGACGGCACCGAGGCGACGAAGTaGCCGCAGTCCTGCTGGATGTTAAAGTGCACGGGCACGGACGGG +
Preference number: 5 (lower is better)
Translates to: ASGELSMLDGTEATK*PQSCWMLKCTGTDG
Trigger: CCCGTCCGTGCCCGTGCACTTTAACATCCAGCAGGACTGCGGCCACTTCGTCGCCTCGGTGCCGTCCAGCATGCTCAGCTCCCCCGACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp TTGCGGTACTGGGAAGCAGACACGATCTCGGGGGCCAGCCGGGCCTaGCTCTTCTTCTGCTGCAGGTTTGGGGTGCCGCCCGGCTTCTGC +
Preference number: 5 (lower is better)
Translates to: LRYWEADTISGASRA*LFFCCRFGVPPGFC
Trigger: GCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGCTGGCCCCCGAGATCGTGTCTGCTTCCCAGTACCGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 90 bp GAGCAGTACTCTCCACCCTCGCTGTCCCCGGAGGGCGAGCACCTTTaGTCACTGTCATCCTCCGAGGGCAGGGATTCCCGCAGGGGCCCA +
Preference number: 5 (lower is better)
Translates to: EQYSPPSLSPEGEHL*SLSSSEGRDSRRGP
Trigger: TGGGCCCCTGCGGGAATCCCTGCCCTCGGAGGATGACAGTGATCAAAGGTGCTCGCCCTCCGGGGACAGCGAGGGTGGAGAGTACTGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CACCTGGGGAGTTGGGTCTGGGCTGTCCCGGCCCCAGCCAGATGCTaGTTTCTGGGCCCAGGCATTACCTGTGCATACCTGGCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: HLGSWVWAVPAPARC*FLGPGITCAYLALA
Trigger: GGCCAAGGCCAGGTATGCACAGGTAATGCCTGGGCCCAGAAAGCAGCATCTGGCTGGGGCCGGGACAGCCCAGACCCAACTCCCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 90 bp AGCCAGCTCAGACGAGGGACCTCCATCGCTGCAGGTCCTAGAGTCTaGGGCCAGGCTGTCCGTGGAGCCGGTGGTGAAGCTGACGTGGAC +
Preference number: 5 (lower is better)
Translates to: SQLRRGTSIAAGPRV*GQAVRGAGGEADVD
Trigger: GTCCACGTCAGCTTCACCACCGGCTCCACGGACAGCCTGGCCTCAGACTCTAGGACCTGCAGCGATGGAGGTCCCTCGTCTGAGCTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp TGGATGATCCCGTGCTCCTTCAGGTGCTCCAGCCCGTTGCAGAGTTaGAGAAGCAGGAAGCACACGCGCCGCTCGTACGCCTCGGGCTCC +
Preference number: 5 (lower is better)
Translates to: WMIPCSFRCSSPLQS*RSRKHTRRSYASGS
Trigger: GGAGCCCGAGGCGTACGAGCGGCGCGTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACCTGAAGGAGCACGGGATCATCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp GAAGCAGACACGATCTCGGGGGCCAGCCGGGCCTGGCTCTTCTTCTaGTGCAGGTTTGGGGTGCCGCCCGGCTTCTGCTTGGCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: EADTISGASRAWLFF*CRFGVPPGFCLAFK
Trigger: TTTGAAGGCCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGCTGGCCCCCGAGATCGTGTCTGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp TCATCATCATCAGGGCCCGCTTCATGTCGATCCAGTTGTGCAGCGTaGCGCACAGCGCCTCCTCCGAGGTGCCCGGCTGCTGCACCAGCT +
Preference number: 5 (lower is better)
Translates to: SSSSGPASCRSSCAA*RTAPPPRCPAAAPA
Trigger: AGCTGGTGCAGCAGCCGGGCACCTCGGAGGAGGCGCTGTGCGGCACGCTGCACAACTGGATCGACATGAAGCGGGCCCTGATGATGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GAGTCTGAGGCCAGGCTGTCCGTGGAGCCGGTGGTGAAGCTGACGTaGACACCCCTGAAGGATGGGCTGAGGCTTTCTGCAGAGCCCTGG +
Preference number: 5 (lower is better)
Translates to: ESEARLSVEPVVKLT*TPLKDGLRLSAEPW
Trigger: CCAGGGCTCTGCAGAAAGCCTCAGCCCATCCTTCAGGGGTGTCCACGTCAGCTTCACCACCGGCTCCACGGACAGCCTGGCCTCAGACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp GGCCGGCCACCAGCTGGTGGTCGCTCCGCAGGCAGAAGCAGTTCTTaGAGGACCCGGGTTTCCAGATGTGCTCCACAAAGTCACTGCACG +
Preference number: 5 (lower is better)
Translates to: GRPPAGGRSAGRSSS*RTRVSRCAPQSHCT
Trigger: CGTGCAGTGACTTTGTGGAGCACATCTGGAAACCCGGGTCCTGCAAGAACTGCTTCTGCCTGCGGAGCGACCACCAGCTGGTGGCCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CTCGGAGTTCTGGCTCACAGGCCCTCGTGGCCACTGCACCCCCACTaGAGAGTCAGGGCTGCTCAGGTAGATCGTCCGATGGTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: LGVLAHRPSWPLHPH*RVRAAQVDRPMVLF
Trigger: GAAGAGGACCATCGGACGATCTACCTGAGCAGCCCTGACTCTGCAGTGGGGGTGCAGTGGCCACGAGGGCCTGTGAGCCAGAACTCCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp GCAAACTTCATCATCATCAGGGCCCGCTTCATGTCGATCCAGTTGTaGAGCGTGCCGCACAGCGCCTCCTCCGAGGTGCCCGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ANFIIIRARFMSIQL*SVPHSASSEVPGCC
Trigger: GCAGCAGCCGGGCACCTCGGAGGAGGCGCTGTGCGGCACGCTGCACAACTGGATCGACATGAAGCGGGCCCTGATGATGATGAAGTTTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CCAGGTACTGGCAGCAAAGCCAGTCCTCCAGCTCCACGCCCCGCCTaGGATCCACCGCCTTCTCCGCAAACTTCATCATCATCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: PGTGSKASPPAPRPA*DPPPSPQTSSSSGP
Trigger: GGGCCCTGATGATGATGAAGTTTGCGGAGAAGGCGGTGGATCGCAGGCGGGGCGTGGAGCTGGAGGACTGGCTTTGCTGCCAGTACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGCAGGCACAGGGTCCTaGGGCGCGTCGGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PVICTISQGDMGASKARQAGTGS*GASGEL
Trigger: CAGCTCCCCCGACGCGCCCAAGGACCCTGTGCCTGC...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp CAGGGTGCTGGTTCATCTTGCGCCCGGCTCTCTGGTGCAGTTTTGTaGGATTCAGAGGTGGGTCACAGAGCGGCTTCCTCTGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: QGAGSSCARLSGAVL*DSEVGHRAASSGLR
Trigger: GCGCAGCCCAGAGGAAGCCGCTCTGTGACCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 90 bp CCGGTCCCAACTTTGCTGTTCTGCCCAGAGGAGCCATCTGTGGGGTaGAGACGGTGCCAGGTCGTGGAGTTTGAATGGTCCGTGGGGCCA +
Preference number: 5 (lower is better)
Translates to: PVPTLLFCPEEPSVG*RRCQVVEFEWSVGP
Trigger: TGGCCCCACGGACCATTCAAACTCCACGACCTGGCACCGTCTCCACCCCACAGATGGCTCCTCTGGGCAGAACAGCAAAGTTGGGACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp CTTAGGTTCAGCTTGGGGCTTGCTGTTCCGGGCTTGGGGGAGCCTTaGGTCCAGAAGAAGCCATCCGGTGAAGAGGCTGCCCGGCTCACT +
Preference number: 5 (lower is better)
Translates to: LRFSLGLAVPGLGEP*VQKKPSGEEAARLT
Trigger: AGTGAGCCGGGCAGCCTCTTCACCGGATGGCTTCTTCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GATCTCGGGGGCCAGCCGGGCCTGGCTCTTCTTCTGCTGCAGGTTTaGGGTGCCGCCCGGCTTCTGCTTGGCCTTCAAAAAGTTGCTGAT +
Preference number: 5 (lower is better)
Translates to: DLGGQPGLALLLLQV*GAARLLLGLQKVAD
Trigger: ATCAGCAACTTTTTGAAGGCCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGCTGGCCCCCGAGATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAGCAGGCACAGGGTCCTaGGGCGCGTCGGGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: IPVICTISQGDMGASKARAGTGS*GASGEL
Trigger: CAGCTCCCCCGACGCGCCCAAGGACCCTGTGCCTGC...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CTCGGGGTTCAGGCAGAGGGTCTGGTGCATCTTGAGCCGACAGGGTaGTGGTTCATCTTGCGCCCGGCTCTCTGGTGCAGTTTTGTGGGA +
Preference number: 5 (lower is better)
Translates to: LGVQAEGLVHLEPTG*WFILRPALWCSFVG
Trigger: TCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS GCA 90 bp CACGCAGACATTTTCAGGCTCTCGGGGTTCAGGCAGAGGGTCTGGTaGATCTTGAGCCGACAGGGTGCTGGTTCATCTTGCGCCCGGCTC +
Preference number: 5 (lower is better)
Translates to: HADIFRLSGFRQRVW*ILSRQGAGSSCARL
Trigger: GAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAGAGCCTGAAAATGTCTGCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 90 bp CTGCACGCAGACATTTTCAGGCTCTCGGGGTTCAGGCAGAGGGTCTaGTGCATCTTGAGCCGACAGGGTGCTGGTTCATCTTGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: LHADIFRLSGFRQRV*CILSRQGAGSSCAR
Trigger: CCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAGAGCCTGAAAATGTCTGCGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 90 bp TCTGCTAGGGGTCACCCCTGGGCAGCCAGGGTCCTGCTGCTTCTCTaGGGCAGGTTCCTTCATGAGGGAGCAGTAATCACTCTCGAGGTG +
Preference number: 5 (lower is better)
Translates to: SARGHPWAARVLLLL*GRFLHEGAVITLEV
Trigger: CACCTCGAGAGTGATTACTGCTCCCTCATGAAGGAACCTGCCCCAGAGAAGCAGCAGGACCCTGGCTGCCCAGGGGTGACCCCTAGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp CTGAAGGAAACGGAACGGGAGCAAAGAGCTTCTTCCCGCTGTTGGTaGGCGAGTGAGCCAGCTCAGACGAGGGACCTCCATCGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LKETEREQRASSRCW*ASEPAQTRDLHRCR
Trigger: CCTGCAGCGATGGAGGTCCCTCGTCTGAGCTGGCTCACTCGCCCACCAACAGCGGGAAGAAGCTCTTTGCTCCCGTTCCGTTTCCTTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp AGCCTGAAGGAAACGGAACGGGAGCAAAGAGCTTCTTCCCGCTGTTaGTGGGCGAGTGAGCCAGCTCAGACGAGGGACCTCCATCGCTGC +
Preference number: 5 (lower is better)
Translates to: SLKETEREQRASSRC*WASEPAQTRDLHRC
Trigger: GCAGCGATGGAGGTCCCTCGTCTGAGCTGGCTCACTCGCCCACCAACAGCGGGAAGAAGCTCTTTGCTCCCGTTCCGTTTCCTTCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp AGACAGGAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTaGGGCTTGGCTCACAGAAGCTGCAGGAGCTTCAGCGACTGTAAG +
Preference number: 5 (lower is better)
Translates to: RQERVRQGRGSDGAG*GLAHRSCRSFSDCK
Trigger: CTTACAGTCGCTGAAGCTCCTGCAGCTTCTGTGAGCCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTCCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACCGCCCGGCCGGAGCATaGTTCGCAGAAGGTCTGCGC +
Preference number: 5 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDRPAGA*FAEGLR
Trigger: GCGCAGACCTTCTGCGAACAATGCTCCGGCCGGGCG...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CAA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGCCGCGGGGCTCAAGGTaGTGCAGGCCGACCATGGTG +
Preference number: 5 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGPRGSR*CRPTMV
Trigger: CACCATGGTCGGCCTGCACAACCTTGAGCCCCGCGG...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTCTTGCTGTTCCGGGCTaGGGGGAGCCTTGGGTCCAG +
Preference number: 5 (lower is better)
Translates to: QGGLSAERRRVWTGNSILLAVPG*GEPWVQ
Trigger: CTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAAG...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 90 bp ACATTTTCAGGCTCTCGGGGTTCAGGCAGAGGGTCTGGTGCATCTTaGGCCGACAGGGTGCTGGTTCATCTTGCGCCCGGCTCTCTGGTG +
Preference number: 5 (lower is better)
Translates to: TFSGSRGSGRGSGAS*ADRVLVHLAPGSLV
Trigger: CACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAGAGCCTGAAAATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS TCA 90 bp CTGGCCTTGGCCCTGGGCAGCAGCTGCATGTTCTATCTTGGCCTGTaGCTTGGAAGGCACCGGAGCTGCCTTCTTCCTCTTGGTGCTCTC +
Preference number: 5 (lower is better)
Translates to: LALALGSSCMFYLGL*LGRHRSCLLPLGAL
Trigger: GAGAGCACCAAGAGGAAGAAGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGCCAAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CTTGAGCCGACAGGGTGCTGGTTCATCTTGCGCCCGGCTCTCTGGTaGAGTTTTGTGGGATTCAGAGGTGGGTCACAGAGCGGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LEPTGCWFILRPALW*SFVGFRGGSQSGFL
Trigger: GAGGAAGCCGCTCTGTGACCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 90 bp GGGGTTCAGGCAGAGGGTCTGGTGCATCTTGAGCCGACAGGGTGCTaGTTCATCTTGCGCCCGGCTCTCTGGTGCAGTTTTGTGGGATTC +
Preference number: 5 (lower is better)
Translates to: GVQAEGLVHLEPTGC*FILRPALWCSFVGF
Trigger: GAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 90 bp GGTTTTTCTTTGTGCACAGCCTTCTCCTCCGGGAAGCTCACCGGGTaGAAGGCAATGTTCCTCTCGCCGCGGGGCTCAAGGTTGTGCAGG +
Preference number: 5 (lower is better)
Translates to: GFSLCTAFSSGKLTG*KAMFLSPRGSRLCR
Trigger: CCTGCACAACCTTGAGCCCCGCGGCGAGAGGAACATTGCCTTCCACCCGGTGAGCTTCCCGGAGGAGAAGGCTGTGCACAAAGAAAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp TCATCCCGGTCCCAACTTTGCTGTTCTGCCCAGAGGAGCCATCTGTaGGGTGGAGACGGTGCCAGGTCGTGGAGTTTGAATGGTCCGTGG +
Preference number: 5 (lower is better)
Translates to: SSRSQLCCSAQRSHL*GGDGARSWSLNGPW
Trigger: CCACGGACCATTCAAACTCCACGACCTGGCACCGTCTCCACCCCACAGATGGCTCCTCTGGGCAGAACAGCAAAGTTGGGACCGGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCTGACACCTGGGGAGTaGGGTCTGGGCTGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRLTPGE*GLGCPG
Trigger: GCCGGGACAGCCCAGACCCAACTCCCCAGGTGTCAG...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 90 bp TGTTGCCCGCCAGCCCTGCTGCCGGAAGCCAGTGGCCACTGCCTTTaGAAGCTTTCTCCAGAGGATCGGAAGAGGAGAAGACAGGATGGT +
Preference number: 5 (lower is better)
Translates to: CCPPALLPEASGHCL*KLSPEDRKRRRQDG
Trigger: ACCATCCTGTCTTCTCCTCTTCCGATCCTCTGGAGAAAGCTTTCAAAGGCAGTGGCCACTGGCTTCCGGCAGCAGGGCTGGCGGGCAACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CAGAGGGTCTGGTGCATCTTGAGCCGACAGGGTGCTGGTTCATCTTaGGCCCGGCTCTCTGGTGCAGTTTTGTGGGATTCAGAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: QRVWCILSRQGAGSS*ARLSGAVLWDSEVG
Trigger: ACCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 90 bp CATCTTGAGCCGACAGGGTGCTGGTTCATCTTGCGCCCGGCTCTCTaGTGCAGTTTTGTGGGATTCAGAGGTGGGTCACAGAGCGGCTTC +
Preference number: 5 (lower is better)
Translates to: HLEPTGCWFILRPAL*CSFVGFRGGSQSGF
Trigger: GAAGCCGCTCTGTGACCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 90 bp CAGCCAGATGCTGCTTTCTGGGCCCAGGCATTACCTGTGCATACCTaGCCTTGGCCCTGGGCAGCAGCTGCATGTTCTATCTTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: QPDAAFWAQALPVHT*PWPWAAAACSILAC
Trigger: ACAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGCCAAGGCCAGGTATGCACAGGTAATGCCTGGGCCCAGAAAGCAGCATCTGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GAGATTCGTCGTGGACGTTGGTTTCCGAGTGGCTTAGGTTCAGCTTaGGGCTTGCTGTTCCGGGCTTGGGGGAGCCTTGGGTCCAGAAGA +
Preference number: 5 (lower is better)
Translates to: EIRRGRWFPSGLGSA*GLLFRAWGSLGSRR
Trigger: TCTTCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCACTCGGAAACCAACGTCCACGACGAATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAGTCTGGGAGGCAGCCTaGGCAACAGGGCTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGVWEAA*ATGLPG
Trigger: CCCTGGGAGCCCTGTTGCCAAGGCTGCCTCCCAGAC...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGGGCTTGGGGGAGCCTaGGGTCCAGAAGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDGLGGA*GPEEAI
Trigger: GATGGCTTCTTCTGGACCCAAGGCTCCCCCAAGCCC...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp AGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAGGTTCAGCTTGGGGCTaGCTGTTCCGGGCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: SHLYHFPGRHGCFQGETGGSAWG*LFRAWG
Trigger: CCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACC...TCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAGCTCCCGGTGGAGGCTaGACTGGACACGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: IPVICTISQGDMGASKARAPGGG*TGHAQL
Trigger: CAGCTGAGCGTGTCCAGTCAAGCCTCCACCGGGAGC...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGGCTCCCGGTGGAGGCTaGACTGGACACGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLAPGGG*TGHAQL
Trigger: CAGCTGAGCGTGTCCAGTCAAGCCTCCACCGGGAGC...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCCGATGCGGATACGCTaGATGGGGTCGGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: PVICTISQGDMGASKARQPMRIR*MGSASS
Trigger: ACTGGAGGCCGACCCCATCAAGCGTATCCGCATCGG...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGCACTGCAGCACGCGCTaGGCCTCGCCGATGCGGATA +
Preference number: 5 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEHCSTR*ASPMRI
Trigger: TATCCGCATCGGCGAGGCCAAGCGCGTGCTGCAGTG...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp CTCCGCAGGCAGAAGCAGTTCTTGCAGGACCCGGGTTTCCAGATGTaGTCCACAAAGTCACTGCACGCAGACATTTTCAGGCTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: LRRQKQFLQDPGFQM*STKSLHADIFRLSG
Trigger: CCCCGAGAGCCTGAAAATGTCTGCGTGCAGTGACTTTGTGGAGCACATCTGGAAACCCGGGTCCTGCAAGAACTGCTTCTGCCTGCGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp CTTGGCCCTGGGCAGCAGCTGCATGTTCTATCTTGGCCTGTGACTTaGAAGGCACCGGAGCTGCCTTCTTCCTCTTGGTGCTCTCAGCAT +
Preference number: 5 (lower is better)
Translates to: LGPGQQLHVLSWPVT*KAPELPSSSWCSQH
Trigger: ATGCTGAGAGCACCAAGAGGAAGAAGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGCCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GATGCTGCTTTCTGGGCCCAGGCATTACCTGTGCATACCTGGCCTTaGCCCTGGGCAGCAGCTGCATGTTCTATCTTGGCCTGTGACTTG +
Preference number: 5 (lower is better)
Translates to: DAAFWAQALPVHTWP*PWAAAACSILACDL
Trigger: CAAGTCACAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGCCAAGGCCAGGTATGCACAGGTAATGCCTGGGCCCAGAAAGCAGCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAGGGTGCTGGTTCATCTaGCGCCCGGCTCTCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PGCIQFTELSSGRCMELEGCWFI*RPALWC
Trigger: GCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCC...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CAA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGAGGGTCTGGTGCATCTaGAGCCGACAGGGTGCTGGT +
Preference number: 5 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGRVWCI*SRQGAG
Trigger: ACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCT...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CAA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGGCCAGGTCGTGGAGTTaGAATGGTCCGTGGGGCCAT +
Preference number: 5 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRARSWS*NGPWGH
Trigger: ATGGCCCCACGGACCATTCAAACTCCACGACCTGGC...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGTGGCTTAGGTTCAGCTaGGGGCTTGCTGTTCCGGGC +
Preference number: 5 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGWLRFS*GLAVPG
Trigger: GCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCA...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACGCACCTCGAACGGGTaGGGTTGGTGCAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: QCPGCIQFTELSSGRCMERTSNG*GWCSSS
Trigger: CGAGCTGCTGCACCAACCCAACCCGTTCGAGGTGCG...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGCACTGCAGCACGCGCTaGGCCTCGCCGATGCGGATA +
Preference number: 5 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRHCSTR*ASPMRI
Trigger: TATCCGCATCGGCGAGGCCAAGCGCGTGCTGCAGTG...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp AGGCCTCGGAGCTCATCATGGTGGGCTTCACGGCAATTGTGGGCTTaGAGTAAGGTGAGCTGTTCACACCTTCATCTTCCAGGCGGCAGT +
Preference number: 5 (lower is better)
Translates to: RPRSSSWWASRQLWA*SKVSCSHLHLPGGS
Trigger: ACTGCCGCCTGGAAGATGAAGGTGTGAACAGCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCACCATGATGAGCTCCGAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GGTTGGCCTCTGTCCACACATCAGAGGCCTCGGAGCTCATCATGGTaGGCTTCACGGCAATTGTGGGCTTGGAGTAAGGTGAGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: GWPLSTHQRPRSSSW*ASRQLWAWSKVSCS
Trigger: TGAACAGCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCACCATGATGAGCTCCGAGGCCTCTGATGTGTGGACAGAGGCCAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACGGAGGGCGAGCACCTTaGATCACTGTCATCCTCCGA +
Preference number: 5 (lower is better)
Translates to: SQSSVPFPRETWVLPRRDGGRAP*ITVILR
Trigger: TCGGAGGATGACAGTGATCAAAGGTGCTCGCCCTCC...GTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTGACACCTGGGGAGTaGGGTCTGGGCTGTCCCGGC +
Preference number: 5 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVLTPGE*GLGCPG
Trigger: GCCGGGACAGCCCAGACCCAACTCCCCAGGTGTCAG...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGACTGATAGCGACACCGTaGGTCCGGCAGGAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGLIATP*VRQEGA
Trigger: CGCTCCTTCCTGCCGGACCAACGGTGTCGCTATCAG...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAAAGGGATCCCGGTCCCAACTTaGCTGTTCTGCCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: SVPFPRETWVLPRRDRKGIPVPT*LFCPEE
Trigger: CTCCTCTGGGCAGAACAGCAAAGTTGGGACCGGGAT...CCCTTTCCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAAGGGCTTGGGGGAGCCTaGGGTCCAGAAGAAGCCATC +
Preference number: 5 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEGLGGA*GPEEAI
Trigger: GATGGCTTCTTCTGGACCCAAGGCTCCCCCAAGCCC...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCGCACCTCGAACGGGTaGGGTTGGTGCAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLRTSNG*GWCSSS
Trigger: CGAGCTGCTGCACCAACCCAACCCGTTCGAGGTGCG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 90 bp GCTCATCATGGTGGGCTTCACGGCAATTGTGGGCTTGGAGTAAGGTaGGCTGTTCACACCTTCATCTTCCAGGCGGCAGTTCTCAGGCCT +
Preference number: 5 (lower is better)
Translates to: AHHGGLHGNCGLGVR*AVHTFIFQAAVLRP
Trigger: AGGCCTGAGAACTGCCGCCTGGAAGATGAAGGTGTGAACAGCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCACCATGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp AGTTCTTGCAGGACCCGGGTTTCCAGATGTGCTCCACAAAGTCACTaGACGCAGACATTTTCAGGCTCTCGGGGTTCAGGCAGAGGGTCT +
Preference number: 5 (lower is better)
Translates to: SSCRTRVSRCAPQSH*TQTFSGSRGSGRGS
Trigger: AGACCCTCTGCCTGAACCCCGAGAGCCTGAAAATGTCTGCGTGCAGTGACTTTGTGGAGCACATCTGGAAACCCGGGTCCTGCAAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp CATCAGAGGCCTCGGAGCTCATCATGGTGGGCTTCACGGCAATTGTaGGCTTGGAGTAAGGTGAGCTGTTCACACCTTCATCTTCCAGGC +
Preference number: 5 (lower is better)
Translates to: HQRPRSSSWWASRQL*AWSKVSCSHLHLPG
Trigger: GCCTGGAAGATGAAGGTGTGAACAGCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCACCATGATGAGCTCCGAGGCCTCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp TGGTCCCAGCAAAGGCAGCCAGTTTCTGGCGGAAGCTCTCCTGGGTaGAGGGCCGGTCTTGGTAAGGAAATGAGGGTTTTTCTTTGTGCA +
Preference number: 5 (lower is better)
Translates to: WSQQRQPVSGGSSPG*RAGLGKEMRVFLCA
Trigger: TGCACAAAGAAAAACCCTCATTTCCTTACCAAGACCGGCCCTCCACCCAGGAGAGCTTCCGCCAGAAACTGGCTGCCTTTGCTGGGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp GAGGCGGAGGAGGAGGTGAGAATGTCTCAATCCCACTTCTGTCCTTaGGGAACTCAAAGGCAAAAGAGGCGGATTTGCTCATCCCGGTCC +
Preference number: 5 (lower is better)
Translates to: EAEEEVRMSQSHFCP*GTQRQKRRICSSRS
Trigger: GGACCGGGATGAGCAAATCCGCCTCTTTTGCCTTTGAGTTCCCCAAGGACAGAAGTGGGATTGAGACATTCTCACCTCCTCCTCCGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGACTTCGGCACTCAGGTaGGCCTCTGTCCACACATCA +
Preference number: 5 (lower is better)
Translates to: PVICTISQGDMGASKARQTSALR*ASVHTS
Trigger: TGATGTGTGGACAGAGGCCAACCTGAGTGCCGAAGT...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGACTTCGGCACTCAGGTaGGCCTCTGTCCACACATCA +
Preference number: 5 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRTSALR*ASVHTS
Trigger: TGATGTGTGGACAGAGGCCAACCTGAGTGCCGAAGT...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGGGAGGGCGAGCACCTTaGATCACTGTCATCCTCCGA +
Preference number: 5 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRGGRAP*ITVILR
Trigger: TCGGAGGATGACAGTGATCAAAGGTGCTCGCCCTCC...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGGTTCAGCTTGGGGCTaGCTGTTCCGGGCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVGSAWG*LFRAWG
Trigger: CCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGTCCTTGCTGCTGATGTaGCTCAGGAGACCGTGCAGC +
Preference number: 5 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGESLLLM*LRRPCS
Trigger: GCTGCACGGTCTCCTGAGCAACATCAGCAGCAAGGA...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGAAGAGGTCCTCACATTaGGCTACAAGGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: LRPVSRLHSVHRTVLRTLKRSSH*ATRRAR
Trigger: CCTGGCCCGCCTTGTAGCCAAATGTGAGGACCTCTT...CAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGAAGAGGTCCTCACATTaGGCTACAAGGCGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEKRSSH*ATRRAR
Trigger: CCTGGCCCGCCTTGTAGCCAAATGTGAGGACCTCTT...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp ATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGCCCGTTGCAGAGTaGCAGAAGCAGGAAGCACAC +
Preference number: 5 (lower is better)
Translates to: IPVICTISQGDMGASKARQPVAE*QKQEAH
Trigger: GTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCTG...TCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAAAGGTGCTCCAGCCCGTaGCAGAGTTGCAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: QCPGCIQFTELSSGRCMERCSSP*QSCRSR
Trigger: CCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACCT...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTTTGGCCTTCAAAAAGTaGCTGATGATGAGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: QGGLSAERRRVWTGNSILLAFKK*LMMSRG
Trigger: GCCCCGGCTCATCATCAGCAACTTTTTGAAGGCCAA...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCCCGATGCGGATACGCTaGATGGGGTCGGCCTCCAGT +
Preference number: 5 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLPMRIR*MGSASS
Trigger: ACTGGAGGCCGACCCCATCAAGCGTATCCGCATCGG...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 90 bp TCCCACTTCTGTCCTTGGGGAACTCAAAGGCAAAAGAGGCGGATTTaGTCATCCCGGTCCCAACTTTGCTGTTCTGCCCAGAGGAGCCAT +
Preference number: 5 (lower is better)
Translates to: SHFCPWGTQRQKRRI*SSRSQLCCSAQRSH
Trigger: ATGGCTCCTCTGGGCAGAACAGCAAAGTTGGGACCGGGATGAGCAAATCCGCCTCTTTTGCCTTTGAGTTCCCCAAGGACAGAAGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGTGGGCTTCACGGCAATaGTGGGCTTGGAGTAAGGTG +
Preference number: 5 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEWASRQ*WAWSKV
Trigger: CACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCA...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTGGGGGACAGCGAGAATaGCCATCAGGGGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: VQRGDECGRATASLVFHIGGQRE*PSGEVE
Trigger: CTCTACCTCCCCTGATGGCAATTCTCGCTGTCCCCC...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATTGGCTACAGCACTCCTaGGGGAAGCTCGGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYWLQHS*GKLGPR
Trigger: GCGGGGCCCGAGCTTCCCCAAGGAGTGCTGTAGCCA...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGCCAGGTCGTGGAGTTaGAATGGTCCGTGGGGCCAT +
Preference number: 5 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLARSWS*NGPWGH
Trigger: ATGGCCCCACGGACCATTCAAACTCCACGACCTGGC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGGATTCGTCGTGGACGTaGGTTTCCGAGTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: QVSQSSVPFPRETWVLPRDSSWT*VSEWLR
Trigger: CCTAAGCCACTCGGAAACCAACGTCCACGACGAATC...CCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGTTGGCCTTCAAAAAGTaGCTGATGATGAGCCGGGGC +
Preference number: 5 (lower is better)
Translates to: QSSVPFPRETWVLPRRDRLAFKK*LMMSRG
Trigger: GCCCCGGCTCATCATCAGCAACTTTTTGAAGGCCAA...CCTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAACCGCCCGGCTTCTGCTaGGCCTTCAAAAAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PGCIQFTELSSGRCMELEPPGFC*AFKKLL
Trigger: CAGCAACTTTTTGAAGGCCAAGCAGAAGCCGGGCGG...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGTGGAACTCATCGAACTaGCGGTACTGGGAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: PVICTISQGDMGASKARQWNSSN*RYWEAD
Trigger: GTCTGCTTCCCAGTACCGCAAGTTCGATGAGTTCCA...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGTGGGCTTCACGGCAATaGTGGGCTTGGAGTAAGGTG +
Preference number: 5 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRWASRQ*WAWSKV
Trigger: CACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCA...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGGGGGACAGCGAGAATaGCCATCAGGGGAGGTAGAG +
Preference number: 5 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVGGQRE*PSGEVE
Trigger: CTCTACCTCCCCTGATGGCAATTCTCGCTGTCCCCC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGTCTGGGAGGCAGCCTaGGCAACAGGGCTCCCAGGG +
Preference number: 5 (lower is better)
Translates to: YILHPGIPVICTISQGDMVWEAA*ATGLPG
Trigger: CCCTGGGAGCCCTGTTGCCAAGGCTGCCTCCCAGAC...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGGCTGCATGTTCTATCTaGGCCTGTGACTTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEAACSI*ACDLEG
Trigger: GCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGC...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAAGCAAAAGAGGCGGATTaGCTCATCCCGGTCCCAACT +
Preference number: 5 (lower is better)
Translates to: QCPGCIQFTELSSGRCMEAKEAD*LIPVPT
Trigger: AGTTGGGACCGGGATGAGCAAATCCGCCTCTTTTGC...TTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCTGGCTTAGGTTCAGCTaGGGGCTTGCTGTTCCGGGC +
Preference number: 5 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVWLRFS*GLAVPG
Trigger: GCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCA...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGGAGTCACAGCAGGGCTaGTTACAAGTCAGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWESQQG*LQVSLK
Trigger: CTTCAAGCTGACTTGTAACAAGCCCTGCTGTGACTC...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGACAGGAGTCACAGCAGGGCTaGTTACAAGTCAGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PVICTISQGDMGASKARQESQQG*LQVSLK
Trigger: CTTCAAGCTGACTTGTAACAAGCCCTGCTGTGACTC...CTGTCTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTCAGCCCGTTGCAGAGTaGCAGAAGCAGGAAGCACAC +
Preference number: 5 (lower is better)
Translates to: VQRGDECGRATASLVFHIQPVAE*QKQEAH
Trigger: GTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCTG...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp TTGAAGAGCGACCAGTTATTCTCATTGAAGTGGAGCTCCTTTTTCTaGCCGCCCATGAAGAGGTCCTCACATTTGGCTACAAGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: LKSDQLFSLKWSSFF*PPMKRSSHLATRRA
Trigger: GGCCCGCCTTGTAGCCAAATGTGAGGACCTCTTCATGGGCGGCCAGAAAAAGGAGCTCCACTTCAATGAGAATAACTGGTCGCTCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCAGGCAGAAGCAGTTCTaGCAGGACCCGGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVRQKQF*QDPGFQ
Trigger: CTGGAAACCCGGGTCCTGCAAGAACTGCTTCTGCCT...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACACCGCGGGGCTCAAGGTaGTGCAGGCCGACCATGGTG +
Preference number: 5 (lower is better)
Translates to: FTELSSGRCMELEMCIITPRGSR*CRPTMV
Trigger: CACCATGGTCGGCCTGCACAACCTTGAGCCCCGCGG...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACATGGCTACAGCACTCCTaGGGGAAGCTCGGGCCCCGC +
Preference number: 5 (lower is better)
Translates to: FTELSSGRCMELEMCIITWLQHS*GKLGPR
Trigger: GCGGGGCCCGAGCTTCCCCAAGGAGTGCTGTAGCCA...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGATGGAACTCATCGAACTaGCGGTACTGGGAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: SRLHSVHRTVLRTLHGTGWNSSN*RYWEAD
Trigger: GTCTGCTTCCCAGTACCGCAAGTTCGATGAGTTCCA...TCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCTTCATGTCGATCCAGTaGTGCAGCGTGCCGCACAGC +
Preference number: 5 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVFMSIQ*CSVPHS
Trigger: GCTGTGCGGCACGCTGCACAACTGGATCGACATGAA...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGGTGCTTCCAAGGCGAGATCCTAAACAAGGTATaGAGGCCAGTGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: YPSHLYHFPGRHGCFQGEILNKV*RPVSRL
Trigger: CAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT...CTCGCCTTGGAAGCACCCATGTCTCCCTGGGAAATGGTACAGATGACTGGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTATCCCGGTCCCAACTTaGCTGTTCTGCCCAGAGGAG +
Preference number: 5 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTIPVPT*LFCPEE
Trigger: CTCCTCTGGGCAGAACAGCAAAGTTGGGACCGGGAT...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCGCTGCATGTTCTATCTaGGCCTGTGACTTGGAAGGC +
Preference number: 5 (lower is better)
Translates to: LNKVLRPVSRLHSVHRTVAACSI*ACDLEG
Trigger: GCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGC...GACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATAATTACACTGATAGCGACACCGTaGGTCCGGCAGGAAGGAGCG +
Preference number: 5 (lower is better)
Translates to: FTELSSGRCMELEMCIITLIATP*VRQEGA
Trigger: CGCTCCTTCCTGCCGGACCAACGGTGTCGCTATCAG...TGTAATTATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGCAAAAGAGGCGGATTaGCTCATCCCGGTCCCAACT +
Preference number: 5 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTAKEAD*LIPVPT
Trigger: AGTTGGGACCGGGATGAGCAAATCCGCCTCTTTTGC...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp AAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGATCCCACTTCTGTCCTaGGGGAACTCAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: KVLRPVSRLHSVHRTVLRIPLLS*GNSKAK
Trigger: TTTTGCCTTTGAGTTCCCCAAGGACAGAAGTGGGAT...CCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CAGGGAGGACTTAGTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAAATCAGAGCTGCTCTaGTTCATTTTTAGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: QGGLSAERRRVWTGNSILKSELL*FIFRRC
Trigger: GCACCTTCTAAAAATGAACAAGAGCAGCTCTGATTT...AAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCACTAAGTCCTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATTCCTTGCTGCTGATGTaGCTCAGGAGACCGTGCAGC +
Preference number: 5 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYSLLLM*LRRPCS
Trigger: GCTGCACGGTCTCCTGAGCAACATCAGCAGCAAGGA...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGAGGTGCTCCAGCCCGTaGCAGAGTTGCAGAAGCAGG +
Preference number: 5 (lower is better)
Translates to: YILHPGIPVICTISQGDMRCSSP*QSCRSR
Trigger: CCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACCT...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTATCCTAAACAAGGTATaGAGGCCAGTGTCCAGGCTG +
Preference number: 5 (lower is better)
Translates to: VQRGDECGRATASLVFHIILNKV*RPVSRL
Trigger: CAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp GCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAAATCAGAGCTGCTCTaGTTCATTTTTAGAAGGTGC +
Preference number: 5 (lower is better)
Translates to: ASVQAAFSSQNCPQDVAWKSELL*FIFRRC
Trigger: GCACCTTCTAAAAATGAACAAGAGCAGCTCTGATTT...CCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGTTCATGTCGATCCAGTaGTGCAGCGTGCCGCACAGC +
Preference number: 5 (lower is better)
Translates to: YILHPGIPVICTISQGDMFMSIQ*CSVPHS
Trigger: GCTGTGCGGCACGCTGCACAACTGGATCGACATGAA...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGATTCGTCGTGGACGTaGGTTTCCGAGTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: YILHPGIPVICTISQGDMDSSWT*VSEWLR
Trigger: CCTAAGCCACTCGGAAACCAACGTCCACGACGAATC...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CCAGGCTGCATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAATTGTTACAAGTCAGCTaGAAGAGCGACCAGTTATTC +
Preference number: 5 (lower is better)
Translates to: PGCIQFTELSSGRCMELELLQVS*KSDQLF
Trigger: GAATAACTGGTCGCTCTTCAAGCTGACTTGTAACAA...TTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATGCAGCCTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 90 bp TTGTTACAAGTCAGCTTGAAGAGCGACCAGTTATTCTCATTGAAGTaGAGCTCCTTTTTCTGGCCGCCCATGAAGAGGTCCTCACATTTG +
Preference number: 5 (lower is better)
Translates to: LLQVSLKSDQLFSLK*SSFFWPPMKRSSHL
Trigger: CAAATGTGAGGACCTCTTCATGGGCGGCCAGAAAAAGGAGCTCCACTTCAATGAGAATAACTGGTCGCTCTTCAAGCTGACTTGTAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp ATCCTAAACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTATCCCACTTCTGTCCTaGGGGAACTCAAAGGCAAAA +
Preference number: 5 (lower is better)
Translates to: ILNKVLRPVSRLHSVHRTIPLLS*GNSKAK
Trigger: TTTTGCCTTTGAGTTCCCCAAGGACAGAAGTGGGAT...AGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTTTAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp AACAAGGTATTGAGGCCAGTGTCCAGGCTGCATTCAGTTCACAGAACTGTCCTCGACCAGTTATTCTCATaGAAGTGGAGCTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: NKVLRPVSRLHSVHRTVLDQLFS*KWSSFF
Trigger: GAAAAAGGAGCTCCACTTCAATGAGAATAACTGGTC...GAGGACAGTTCTGTGAACTGAATGCAGCCTGGACACTGGCCTCAATACCTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp GTGCAGAGAGGAGACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTTGTTACAAGTCAGCTaGAAGAGCGACCAGTTATTC +
Preference number: 5 (lower is better)
Translates to: VQRGDECGRATASLVFHILLQVS*KSDQLF
Trigger: GAATAACTGGTCGCTCTTCAAGCTGACTTGTAACAA...AATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTCTCCTCTCTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp CATTCAGTTCACAGAACTGTCCTCAGGACGTTGCATGGAACTGGAAATGTGTATACTGTCCTCAGGACGTaGCATGGAACTGGAAATGTG +
Preference number: 5 (lower is better)
Translates to: HSVHRTVLRTLHGTGNVYTVLRT*HGTGNV
Trigger: CACATTTCCAGTTCCATGCAACGTCCTGAGGACAGT...ATACACATTTCCAGTTCCATGCAACGTCCTGAGGACAGTTCTGTGAACTGAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp GACGAGTGTGGACGGGCAACAGCATCCTTAGTCTTTCATATTTATATATGGTATCTCTCTGGTGCAGTTTaGTGGGATTCAGAGGTGGGT +
Preference number: 5 (lower is better)
Translates to: DECGRATASLVFHIYIWYLSGAV*WDSEVG
Trigger: ACCCACCTCTGAATCCCACAAAACTGCACCAGAGAG...ATACCATATATAAATATGAAAGACTAAGGATGCTGTTGCCCGTCCACACTCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS-3UTR CAA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGACTGTCCTCAGGACGTaGCATGGAACTGGAAATGTG +
Preference number: 5 (lower is better)
Translates to: YILHPGIPVICTISQGDMTVLRT*HGTGNV
Trigger: CACATTTCCAGTTCCATGCAACGTCCTGAGGACAGT...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS-3UTR CAA 90 bp TATATTTTACATCCAGGTATCCCAGTCATCTGTACCATTTCCCAGGGAGACATGGACCAGTTATTCTCATaGAAGTGGAGCTCCTTTTTC +
Preference number: 5 (lower is better)
Translates to: YILHPGIPVICTISQGDMDQLFS*KWSSFF
Trigger: GAAAAAGGAGCTCCACTTCAATGAGAATAACTGGTC...CATGTCTCCCTGGGAAATGGTACAGATGACTGGGATACCTGGATGTAAAATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp GGCCCCTCCGTCGGTCTCCGAGCCGCCAGCCGCCCGGCCGGAGCATaGTTCGCAGAAGGTCTGCGCGCGGTGCGTGCCCGGCCGCGGGCG +
Preference number: 6 (lower is better)
Translates to: GPSVGLRAASRPAGA*FAEGLRAVRARPRA
Trigger: CGCCCGCGGCCGGGCACGCACCGCGCGCAGACCTTCTGCGAACAATGCTCCGGCCGGGCGGCTGGCGGCTCGGAGACCGACGGAGGGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS GCA 72 bp CCAGCCGCCCGGCCGGAGCATTGTTCGCAGAAGGTCTaGGCGCGGTGCGTGCCCGGCCGCGGGCGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PAARPEHCSQKV*ARCVPGRGRVA
Trigger: AGCCACCCGCCCGCGGCCGGGCACGCACCGCGCGCAGACCTTCTGCGAACAATGCTCCGGCCGGGCGGCTGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS GCA 72 bp GTGCCGCACAGCGCCTCCTCCGAGGTGCCCGGCTGCTaGACCAGCTCGCGCCGAGGCCCCCACAGCAGGCAC +
Preference number: 6 (lower is better)
Translates to: VPHSASSEVPGC*TSSRRGPHSRH
Trigger: GTGCCTGCTGTGGGGGCCTCGGCGCGAGCTGGTGCAGCAGCCGGGCACCTCGGAGGAGGCGCTGTGCGGCAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp AGCGTGCCGCACAGCGCCTCCTCCGAGGTGCCCGGCTaGTGCACCAGCTCGCGCCGAGGCCCCCACAGCAGG +
Preference number: 6 (lower is better)
Translates to: SVPHSASSEVPG*CTSSRRGPHSR
Trigger: CCTGCTGTGGGGGCCTCGGCGCGAGCTGGTGCAGCAGCCGGGCACCTCGGAGGAGGCGCTGTGCGGCACGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CGCGCCGCTCGTACGCCTCGGGCTCCGCCTGGTGGCTaGCCGCCGAGTCCCGCACGAAGTCGGAGGCGGTCT +
Preference number: 6 (lower is better)
Translates to: RAARTPRAPPGG*PPSPARSRRRS
Trigger: AGACCGCCTCCGACTTCGTGCGGGACTCGGCGGCCAGCCACCAGGCGGAGCCCGAGGCGTACGAGCGGCGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CACACGCGCCGCTCGTACGCCTCGGGCTCCGCCTGGTaGCTGGCCGCCGAGTCCCGCACGAAGTCGGAGGCG +
Preference number: 6 (lower is better)
Translates to: HTRRSYASGSAW*LAAESRTKSEA
Trigger: CGCCTCCGACTTCGTGCGGGACTCGGCGGCCAGCCACCAGGCGGAGCCCGAGGCGTACGAGCGGCGCGTGTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp GTCGGTCTCCGAGCCGCCAGCCGCCCGGCCGGAGCATaGTTCGCAGAAGGTCTGCGCGCGGTGCGTGCCCGG +
Preference number: 6 (lower is better)
Translates to: VGLRAASRPAGA*FAEGLRAVRAR
Trigger: CCGGGCACGCACCGCGCGCAGACCTTCTGCGAACAATGCTCCGGCCGGGCGGCTGGCGGCTCGGAGACCGAC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS GCA 72 bp TGCACTGGAGGCCAGGGCTCCCGCAGCCGCCTCTGTTaGCCGCCAGCCCTGCTGCCGGAAGCCAGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: CTGGQGSRSRLC*PPALLPEASGH
Trigger: GTGGCCACTGGCTTCCGGCAGCAGGGCTGGCGGGCAACAGAGGCGGCTGCGGGAGCCCTGGCCTCCAGTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp AAGCACACGCGCCGCTCGTACGCCTCGGGCTCCGCCTaGTGGCTGGCCGCCGAGTCCCGCACGAAGTCGGAG +
Preference number: 6 (lower is better)
Translates to: KHTRRSYASGSA*WLAAESRTKSE
Trigger: CTCCGACTTCGTGCGGGACTCGGCGGCCAGCCACCAGGCGGAGCCCGAGGCGTACGAGCGGCGCGTGTGCTT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp GGGCAGGCACAGGGTCCTTGGGCGCGTCGGGGGAGCTaGGCATGCTGGACGGCACCGAGGCGACGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: GQAQGPWARRGS*ACWTAPRRRSG
Trigger: GCCACTTCGTCGCCTCGGTGCCGTCCAGCATGCTCAGCTCCCCCGACGCGCCCAAGGACCCTGTGCCTGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CGCTCAGCTGGGAGGATGAGGCGGAGGGGGCCCCTTTaGACTGGAGGCCAGGGCTCCCGCAGCCGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: RSAGRMRRRGPL*TGGQGSRSRLC
Trigger: ACAGAGGCGGCTGCGGGAGCCCTGGCCTCCAGTGCAAAGGGGCCCCCTCCGCCTCATCCTCCCAGCTGAGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CTGCGGGCCCGGAACACTTCCCCTGCTCCCAGCACGTaGGTGAGCAGTCCCTGCCACCATGCCTGCCCCGGG +
Preference number: 6 (lower is better)
Translates to: LRARNTSPAPST*VSSPCHHACPG
Trigger: CCCGGGGCAGGCATGGTGGCAGGGACTGCTCACCCACGTGCTGGGAGCAGGGGAAGTGTTCCGGGCCCGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp CGCCGAGGCCCCCACAGCAGGCACTGCAGCACGCGCTaGGCCTCGCCGATGCGGATACGCTTGATGGGGTCG +
Preference number: 6 (lower is better)
Translates to: RRGPHSRHCSTR*ASPMRIRLMGS
Trigger: CGACCCCATCAAGCGTATCCGCATCGGCGAGGCCAAGCGCGTGCTGCAGTGCCTGCTGTGGGGGCCTCGGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp ACCAGCTCGCGCCGAGGCCCCCACAGCAGGCACTGCAGCACGCGCTaGGCCTCGCCGATGCGGATACGCTTGATGGGGTCGGCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: TSSRRGPHSRHCSTR*ASPMRIRLMGSASS
Trigger: ACTGGAGGCCGACCCCATCAAGCGTATCCGCATCGGCGAGGCCAAGCGCGTGCTGCAGTGCCTGCTGTGGGGGCCTCGGCGCGAGCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp ATCTCGGGGGCCAGCCGGGCCTGGCTCTTCTTCTGCTaGAGGTTTGGGGTGCCGCCCGGCTTCTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: ISGASRAWLFFC*RFGVPPGFCLA
Trigger: GGCCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGCTGGCCCCCGAGAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GGGTGGGCCGCCATGACTGTGATGGTGGCTGACACCTaGGGAGTTGGGTCTGGGCTGTCCCGGCCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: GWAAMTVMVADT*GVGSGLSRPQP
Trigger: TGGCTGGGGCCGGGACAGCCCAGACCCAACTCCCCAGGTGTCAGCCACCATCACAGTCATGGCGGCCCACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TCCGGCACTGACGACTCCAGGTGCCTGCCTGGAACCTaGGCCGCCTCTGTTCCGAGGCTGACGAGGCGGCAG +
Preference number: 6 (lower is better)
Translates to: SGTDDSRCLPGT*AASVPRLTRRQ
Trigger: CTGCCGCCTCGTCAGCCTCGGAACAGAGGCGGCCCAGGTTCCAGGCAGGCACCTGGAGTCGTCAGTGCCGGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TGTAAGAGGGCCCCGGGCTCCGCAGACGCCAGGTACTaGCAGCAAAGCCAGTCCTCCAGCTCCACGCCCCGC +
Preference number: 6 (lower is better)
Translates to: CKRAPGSADARY*QQSQSSSSTPR
Trigger: GCGGGGCGTGGAGCTGGAGGACTGGCTTTGCTGCCAGTACCTGGCGTCTGCGGAGCCCGGGGCCCTCTTACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp CTGGCCGCCGAGTCCCGCACGAAGTCGGAGGCGGTCTaGTGTGGCACCTCTCGGGTGATGACCACCACGCAG +
Preference number: 6 (lower is better)
Translates to: LAAESRTKSEAV*CGTSRVMTTTQ
Trigger: CTGCGTGGTGGTCATCACCCGAGAGGTGCCACATCAGACCGCCTCCGACTTCGTGCGGGACTCGGCGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp ACTTCCCCTGCTCCCAGCACGTGGGTGAGCAGTCCCTaGCACCATGCCTGCCCCGGGAACCTGCAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: TSPAPSTWVSSP*HHACPGNLQSG
Trigger: CCCAGACTGCAGGTTCCCGGGGCAGGCATGGTGGCAGGGACTGCTCACCCACGTGCTGGGAGCAGGGGAAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CGCTTCTCCTGCTCTGCGGGCCCGGAACACTTCCCCTaGTCCCAGCACGTGGGTGAGCAGTCCCTGCCACCA +
Preference number: 6 (lower is better)
Translates to: RFSCSAGPEHFP*SQHVGEQSLPP
Trigger: TGGTGGCAGGGACTGCTCACCCACGTGCTGGGAGCAGGGGAAGTGTTCCGGGCCCGCAGAGCAGGAGAAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp ACGATCTCGGGGGCCAGCCGGGCCTGGCTCTTCTTCTaGTGCAGGTTTGGGGTGCCGCCCGGCTTCTGCTTG +
Preference number: 6 (lower is better)
Translates to: TISGASRAWLFF*CRFGVPPGFCL
Trigger: CAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGCTGGCCCCCGAGATCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GCAGCTGAAGCTGGGTGCTCCCGGTGGAGGCTTGACTaGACACGCTCAGCTGGGAGGATGAGGCGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: AAEAGCSRWRLD*TRSAGRMRRRG
Trigger: CCCCCTCCGCCTCATCCTCCCAGCTGAGCGTGTCCAGTCAAGCCTCCACCGGGAGCACCCAGCTTCAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TGGGAAGCAGACACGATCTCGGGGGCCAGCCGGGCCTaGCTCTTCTTCTGCTGCAGGTTTGGGGTGCCGCCC +
Preference number: 6 (lower is better)
Translates to: WEADTISGASRA*LFFCCRFGVPP
Trigger: GGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGCTGGCCCCCGAGATCGTGTCTGCTTCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp GGAGCAGTACTCTCCACCCTCGCTGTCCCCGGAGGGCGAGCACCTTaGATCACTGTCATCCTCCGAGGGCAGGGATTCCCGCAGGGGCCC +
Preference number: 6 (lower is better)
Translates to: GAVLSTLAVPGGRAP*ITVILRGQGFPQGP
Trigger: GGGCCCCTGCGGGAATCCCTGCCCTCGGAGGATGACAGTGATCAAAGGTGCTCGCCCTCCGGGGACAGCGAGGGTGGAGAGTACTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CTGGACGGCACCGAGGCGACGAAGTGGCCGCAGTCCTaGTGGATGTTAAAGTGCACGGGCACGGACGGGCTG +
Preference number: 6 (lower is better)
Translates to: LDGTEATKWPQS*WMLKCTGTDGL
Trigger: CAGCCCGTCCGTGCCCGTGCACTTTAACATCCAGCAGGACTGCGGCCACTTCGTCGCCTCGGTGCCGTCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp AGCGACGGTGCAGGCTGGGGCTTGGCTCACAGAAGCTaGAGGAGCTTCAGCGACTGTAAGAGGGCCCCGGGC +
Preference number: 6 (lower is better)
Translates to: SDGAGWGLAHRS*RSFSDCKRAPG
Trigger: GCCCGGGGCCCTCTTACAGTCGCTGAAGCTCCTGCAGCTTCTGTGAGCCAAGCCCCAGCCTGCACCGTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CCTTGGCAACAGGGCTCCCAGGGCAGCAGTCCAGGATaGAGCAGTACTCTCCACCCTCGCTGTCCCCGGAGG +
Preference number: 6 (lower is better)
Translates to: PWQQGSQGSSPG*SSTLHPRCPRR
Trigger: CCTCCGGGGACAGCGAGGGTGGAGAGTACTGCTCCATCCTGGACTGCTGCCCTGGGAGCCCTGTTGCCAAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GACGGCACCGAGGCGACGAAGTGGCCGCAGTCCTGCTaGATGTTAAAGTGCACGGGCACGGACGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: DGTEATKWPQSC*MLKCTGTDGLQ
Trigger: CTGCAGCCCGTCCGTGCCCGTGCACTTTAACATCCAGCAGGACTGCGGCCACTTCGTCGCCTCGGTGCCGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CGCCGAGTCCCGCACGAAGTCGGAGGCGGTCTGATGTaGCACCTCTCGGGTGATGACCACCACGCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: RRVPHEVGGGLM*HLSGDDHHAVL
Trigger: CAGGACTGCGTGGTGGTCATCACCCGAGAGGTGCCACATCAGACCGCCTCCGACTTCGTGCGGGACTCGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp GCGGCAGGCTGGGGACACCTGGATGGGTCACTGATAGCGACACCGTaGGTCCGGCAGGAAGGAGCGGGGTCAGCAGGACCTTGGGATGGA +
Preference number: 6 (lower is better)
Translates to: AAGWGHLDGSLIATP*VRQEGAGSAGPWDG
Trigger: TCCATCCCAAGGTCCTGCTGACCCCGCTCCTTCCTGCCGGACCAACGGTGTCGCTATCAGTGACCCATCCAGGTGTCCCCAGCCTGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp GGCTCTCGGGGTTCAGGCAGAGGGTCTGGTGCATCTTaGGCCGACAGGGTGCTGGTTCATCTTGCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: GSRGSGRGSGAS*ADRVLVHLAPG
Trigger: GCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAGAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS TCA 72 bp TCTCCACCCTCGCTGTCCCCGGAGGGCGAGCACCTTTaGTCACTGTCATCCTCCGAGGGCAGGGATTCCCGC +
Preference number: 6 (lower is better)
Translates to: SPPSLSPEGEHL*SLSSSEGRDSR
Trigger: GCGGGAATCCCTGCCCTCGGAGGATGACAGTGATCAAAGGTGCTCGCCCTCCGGGGACAGCGAGGGTGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp CCAGCAGCAGGTTCTCCAGGCACAGGTCCCGGTGGATaGTCCCGTGCTCCTTCAGGTGCTCCAGCCCGTTGC +
Preference number: 6 (lower is better)
Translates to: PAAGSPGTGPGG*SRAPSGAPARC
Trigger: GCAACGGGCTGGAGCACCTGAAGGAGCACGGGATCATCCACCGGGACCTGTGCCTGGAGAACCTGCTGCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CTGGCTCACAGGCCCTCGTGGCCACTGCACCCCCACTaGAGAGTCAGGGCTGCTCAGGTAGATCGTCCGATG +
Preference number: 6 (lower is better)
Translates to: LAHRPSWPLHPH*RVRAAQVDRPM
Trigger: CATCGGACGATCTACCTGAGCAGCCCTGACTCTGCAGTGGGGGTGCAGTGGCCACGAGGGCCTGTGAGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CCGTGCTCCTTCAGGTGCTCCAGCCCGTTGCAGAGTTaGAGAAGCAGGAAGCACACGCGCCGCTCGTACGCC +
Preference number: 6 (lower is better)
Translates to: PCSFRCSSPLQS*RSRKHTRRSYA
Trigger: GGCGTACGAGCGGCGCGTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACCTGAAGGAGCACGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GGGGAATGGCGGGCCTCTCCTTGGGCTTGCTCTCGCTaGCACTGTGAGCATGGCTTTCCCTGGAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: GEWRASPWACSR*HCEHGFPWSSA
Trigger: GGCTGAGCTCCAGGGAAAGCCATGCTCACAGTGCCAGCGAGAGCAAGCCCAAGGAGAGGCCCGCCATTCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp CTCTCCACCCTCGCTGTCCCCGGAGGGCGAGCACCTTaGATCACTGTCATCCTCCGAGGGCAGGGATTCCCG +
Preference number: 6 (lower is better)
Translates to: LSTLAVPGGRAP*ITVILRGQGFP
Trigger: CGGGAATCCCTGCCCTCGGAGGATGACAGTGATCAAAGGTGCTCGCCCTCCGGGGACAGCGAGGGTGGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp CCCGTGCTCCTTCAGGTGCTCCAGCCCGTTGCAGAGTaGCAGAAGCAGGAAGCACACGCGCCGCTCGTACGC +
Preference number: 6 (lower is better)
Translates to: PVLLQVLQPVAE*QKQEAHAPLVR
Trigger: GCGTACGAGCGGCGCGTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACCTGAAGGAGCACGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp GGGCCAGCCGGGCCTGGCTCTTCTTCTGCTGCAGGTTaGGGGTGCCGCCCGGCTTCTGCTTGGCCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: GPAGPGSSSAAG*GCRPASAWPSK
Trigger: TTTTGAAGGCCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGCTGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp GTGGATGATCCCGTGCTCCTTCAGGTGCTCCAGCCCGTTGCAGAGTaGCAGAAGCAGGAAGCACACGCGCCGCTCGTACGCCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: VDDPVLLQVLQPVAE*QKQEAHAPLVRLGL
Trigger: GAGCCCGAGGCGTACGAGCGGCGCGTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACCTGAAGGAGCACGGGATCATCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp AGGTCCCGGTGGATGATCCCGTGCTCCTTCAGGTGCTCCAGCCCGTaGCAGAGTTGCAGAAGCAGGAAGCACACGCGCCGCTCGTACGCC +
Preference number: 6 (lower is better)
Translates to: RSRWMIPCSFRCSSP*QSCRSRKHTRRSYA
Trigger: GGCGTACGAGCGGCGCGTGTGCTTCCTGCTTCTGCAACTCTGCAACGGGCTGGAGCACCTGAAGGAGCACGGGATCATCCACCGGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp AGACGAGGGACCTCCATCGCTGCAGGTCCTAGAGTCTaGGGCCAGGCTGTCCGTGGAGCCGGTGGTGAAGCT +
Preference number: 6 (lower is better)
Translates to: RRGTSIAAGPRV*GQAVRGAGGEA
Trigger: AGCTTCACCACCGGCTCCACGGACAGCCTGGCCTCAGACTCTAGGACCTGCAGCGATGGAGGTCCCTCGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CCTCTTCTTCCTCTATCCGGCACTGACGACTCCAGGTaGCTGCCTGGAACCTGGGCCGCCTCTGTTCCGAGG +
Preference number: 6 (lower is better)
Translates to: PLLPLSGTDDSR*LPGTWAASVPR
Trigger: CCTCGGAACAGAGGCGGCCCAGGTTCCAGGCAGGCACCTGGAGTCGTCAGTGCCGGATAGAGGAAGAAGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp ATCATCATCAGGGCCCGCTTCATGTCGATCCAGTTGTaGAGCGTGCCGCACAGCGCCTCCTCCGAGGTGCCC +
Preference number: 6 (lower is better)
Translates to: IIIRARFMSIQL*SVPHSASSEVP
Trigger: GGGCACCTCGGAGGAGGCGCTGTGCGGCACGCTGCACAACTGGATCGACATGAAGCGGGCCCTGATGATGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TTGTGCACAGCCTTCTCCTCCGGGAAGCTCACCGGGTaGAAGGCAATGTTCCTCTCGCCGCGGGGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: LCTAFSSGKLTG*KAMFLSPRGSR
Trigger: CCTTGAGCCCCGCGGCGAGAGGAACATTGCCTTCCACCCGGTGAGCTTCCCGGAGGAGAAGGCTGTGCACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TTCACCTACCTCGGAGTTCTGGCTCACAGGCCCTCGTaGCCACTGCACCCCCACTGCAGAGTCAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: FTYLGVLAHRPS*PLHPHCRVRAA
Trigger: AGCAGCCCTGACTCTGCAGTGGGGGTGCAGTGGCCACGAGGGCCTGTGAGCCAGAACTCCGAGGTAGGTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CCAGCCGAAGTCTCCTCTTCACCTACCTCGGAGTTCTaGCTCACAGGCCCTCGTGGCCACTGCACCCCCACT +
Preference number: 6 (lower is better)
Translates to: PAEVSSSPTSEF*LTGPRGHCTPT
Trigger: AGTGGGGGTGCAGTGGCCACGAGGGCCTGTGAGCCAGAACTCCGAGGTAGGTGAAGAGGAGACTTCGGCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GCCAGGCTGTCCGTGGAGCCGGTGGTGAAGCTGACGTaGACACCCCTGAAGGATGGGCTGAGGCTTTCTGCA +
Preference number: 6 (lower is better)
Translates to: ARLSVEPVVKLT*TPLKDGLRLSA
Trigger: TGCAGAAAGCCTCAGCCCATCCTTCAGGGGTGTCCACGTCAGCTTCACCACCGGCTCCACGGACAGCCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp AGCTTGGGGCTTGCTGTTCCGGGCTTGGGGGAGCCTTaGGTCCAGAAGAAGCCATCCGGTGAAGAGGCTGCC +
Preference number: 6 (lower is better)
Translates to: SLGLAVPGLGEP*VQKKPSGEEAA
Trigger: GGCAGCCTCTTCACCGGATGGCTTCTTCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TCAGGAGACCGTGCAGCTGAAGCTGGGTGCTCCCGGTaGAGGCTTGACTGGACACGCTCAGCTGGGAGGATG +
Preference number: 6 (lower is better)
Translates to: SGDRAAEAGCSR*RLDWTRSAGRM
Trigger: CATCCTCCCAGCTGAGCGTGTCCAGTCAAGCCTCCACCGGGAGCACCCAGCTTCAGCTGCACGGTCTCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GAGCTGAGCATGCTGGACGGCACCGAGGCGACGAAGTaGCCGCAGTCCTGCTGGATGTTAAAGTGCACGGGC +
Preference number: 6 (lower is better)
Translates to: ELSMLDGTEATK*PQSCWMLKCTG
Trigger: GCCCGTGCACTTTAACATCCAGCAGGACTGCGGCCACTTCGTCGCCTCGGTGCCGTCCAGCATGCTCAGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GGCCAGCCGGGCCTGGCTCTTCTTCTGCTGCAGGTTTaGGGTGCCGCCCGGCTTCTGCTTGGCCTTCAAAAA +
Preference number: 6 (lower is better)
Translates to: GQPGLALLLLQV*GAARLLLGLQK
Trigger: TTTTTGAAGGCCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGCTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp AGGCTCTCGGGGTTCAGGCAGAGGGTCTGGTGCATCTaGAGCCGACAGGGTGCTGGTTCATCTTGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: RLSGFRQRVWCI*SRQGAGSSCAR
Trigger: CCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAGAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CAA 90 bp GGGCCGGCCACCAGCTGGTGGTCGCTCCGCAGGCAGAAGCAGTTCTaGCAGGACCCGGGTTTCCAGATGTGCTCCACAAAGTCACTGCAC +
Preference number: 6 (lower is better)
Translates to: GPATSWWSLRRQKQF*QDPGFQMCSTKSLH
Trigger: GTGCAGTGACTTTGTGGAGCACATCTGGAAACCCGGGTCCTGCAAGAACTGCTTCTGCCTGCGGAGCGACCACCAGCTGGTGGCCGGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp TCCGCAAACTTCATCATCATCAGGGCCCGCTTCATGTCGATCCAGTaGTGCAGCGTGCCGCACAGCGCCTCCTCCGAGGTGCCCGGCTGC +
Preference number: 6 (lower is better)
Translates to: SANFIIIRARFMSIQ*CSVPHSASSEVPGC
Trigger: GCAGCCGGGCACCTCGGAGGAGGCGCTGTGCGGCACGCTGCACAACTGGATCGACATGAAGCGGGCCCTGATGATGATGAAGTTTGCGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp GAAAGGGTTAGGCAGGGAAGGGGCAGCGACGGTGCAGGCTGGGGCTaGGCTCACAGAAGCTGCAGGAGCTTCAGCGACTGTAAGAGGGCC +
Preference number: 6 (lower is better)
Translates to: ERVRQGRGSDGAGWG*AHRSCRSFSDCKRA
Trigger: GGCCCTCTTACAGTCGCTGAAGCTCCTGCAGCTTCTGTGAGCCAAGCCCCAGCCTGCACCGTCGCTGCCCCTTCCCTGCCTAACCCTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp GGAGCAAAGAGCTTCTTCCCGCTGTTGGTGGGCGAGTaGGCCAGCTCAGACGAGGGACCTCCATCGCTGCAG +
Preference number: 6 (lower is better)
Translates to: GAKSFFPLLVGE*ASSDEGPPSLQ
Trigger: CTGCAGCGATGGAGGTCCCTCGTCTGAGCTGGCTCACTCGCCCACCAACAGCGGGAAGAAGCTCTTTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp CTGGGGGCCACTGGGGGACACGTCCTCAGTGGAGCCTaGAGGAAACGGAACGGGAGCAAAGAGCTTCTTCCC +
Preference number: 6 (lower is better)
Translates to: LGATGGHVLSGA*RKRNGSKELLP
Trigger: GGGAAGAAGCTCTTTGCTCCCGTTCCGTTTCCTTCAGGCTCCACTGAGGACGTGTCCCCCAGTGGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CAGGCAGAGGGTCTGGTGCATCTTGAGCCGACAGGGTaGTGGTTCATCTTGCGCCCGGCTCTCTGGTGCAGT +
Preference number: 6 (lower is better)
Translates to: QAEGLVHLEPTG*WFILRPALWCS
Trigger: ACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS GCA 72 bp GCCGGGCCTGGCTCTTCTTCTGCTGCAGGTTTGGGGTaGCGCCCGGCTTCTGCTTGGCCTTCAAAAAGTTGC +
Preference number: 6 (lower is better)
Translates to: AGPGSSSAAGLG*RPASAWPSKSC
Trigger: GCAACTTTTTGAAGGCCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAAGAGCCAGGCCCGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp GGCAGCAAAGCCAGTCCTCCAGCTCCACGCCCCGCCTaGGATCCACCGCCTTCTCCGCAAACTTCATCATCA +
Preference number: 6 (lower is better)
Translates to: GSKASPPAPRPA*DPPPSPQTSSS
Trigger: TGATGATGAAGTTTGCGGAGAAGGCGGTGGATCGCAGGCGGGGCGTGGAGCTGGAGGACTGGCTTTGCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TCTCGCCGCGGGGCTCAAGGTTGTGCAGGCCGACCATaGTGTAAGCTGGGGGACAGCGAGAATTGCCATCAG +
Preference number: 6 (lower is better)
Translates to: SRRGAQGCAGRP*CKLGDSENCHQ
Trigger: CTGATGGCAATTCTCGCTGTCCCCCAGCTTACACCATGGTCGGCCTGCACAACCTTGAGCCCCGCGGCGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CGTGGACGTTGGTTTCCGAGTGGCTTAGGTTCAGCTTaGGGCTTGCTGTTCCGGGCTTGGGGGAGCCTTGGG +
Preference number: 6 (lower is better)
Translates to: RGRWFPSGLGSA*GLLFRAWGSLG
Trigger: CCCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCACTCGGAAACCAACGTCCACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp CGACAGGGTGCTGGTTCATCTTGCGCCCGGCTCTCTGGTGCAGTTTaGTGGGATTCAGAGGTGGGTCACAGAGCGGCTTCCTCTGGGCTG +
Preference number: 6 (lower is better)
Translates to: RQGAGSSCARLSGAV*WDSEVGHRAASSGL
Trigger: CAGCCCAGAGGAAGCCGCTCTGTGACCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 72 bp GCCGGTGGTGAAGCTGACGTGGACACCCCTGAAGGATaGGCTGAGGCTTTCTGCAGAGCCCTGGCTCACTTT +
Preference number: 6 (lower is better)
Translates to: AGGEADVDTPEG*AEAFCRALAHF
Trigger: AAAGTGAGCCAGGGCTCTGCAGAAAGCCTCAGCCCATCCTTCAGGGGTGTCCACGTCAGCTTCACCACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp ACGGAACGGGAGCAAAGAGCTTCTTCCCGCTGTTGGTaGGCGAGTGAGCCAGCTCAGACGAGGGACCTCCAT +
Preference number: 6 (lower is better)
Translates to: TEREQRASSRCW*ASEPAQTRDLH
Trigger: ATGGAGGTCCCTCGTCTGAGCTGGCTCACTCGCCCACCAACAGCGGGAAGAAGCTCTTTGCTCCCGTTCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GAAACGGAACGGGAGCAAAGAGCTTCTTCCCGCTGTTaGTGGGCGAGTGAGCCAGCTCAGACGAGGGACCTC +
Preference number: 6 (lower is better)
Translates to: ETEREQRASSRC*WASEPAQTRDL
Trigger: GAGGTCCCTCGTCTGAGCTGGCTCACTCGCCCACCAACAGCGGGAAGAAGCTCTTTGCTCCCGTTCCGTTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp CGTCTCCAGATGACCTGCGAGACTTCGGCACTCAGGTaGGCCTCTGTCCACACATCAGAGGCCTCGGAGCTC +
Preference number: 6 (lower is better)
Translates to: RLQMTCETSALR*ASVHTSEASEL
Trigger: GAGCTCCGAGGCCTCTGATGTGTGGACAGAGGCCAACCTGAGTGCCGAAGTCTCGCAGGTCATCTGGAGACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp TGGCCTTGGCCCTGGGCAGCAGCTGCATGTTCTATCTaGGCCTGTGACTTGGAAGGCACCGGAGCTGCCTTC +
Preference number: 6 (lower is better)
Translates to: WPWPWAAAACSI*ACDLEGTGAAF
Trigger: GAAGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGCCAAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp TGGCTTAGGTTCAGCTTGGGGCTTGCTGTTCCGGGCTaGGGGGAGCCTTGGGTCCAGAAGAAGCCATCCGGT +
Preference number: 6 (lower is better)
Translates to: WLRFSLGLAVPG*GEPWVQKKPSG
Trigger: ACCGGATGGCTTCTTCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp CGTTGGTTTCCGAGTGGCTTAGGTTCAGCTTGGGGCTaGCTGTTCCGGGCTTGGGGGAGCCTTGGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: RWFPSGLGSAWG*LFRAWGSLGSR
Trigger: TCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCACTCGGAAACCAACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp TCGTGGACGTTGGTTTCCGAGTGGCTTAGGTTCAGCTaGGGGCTTGCTGTTCCGGGCTTGGGGGAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: SWTLVSEWLRFS*GLAVPGLGEPW
Trigger: CCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCACTCGGAAACCAACGTCCACGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp TTCATCATCATCAGGGCCCGCTTCATGTCGATCCAGTaGTGCAGCGTGCCGCACAGCGCCTCCTCCGAGGTG +
Preference number: 6 (lower is better)
Translates to: FIIIRARFMSIQ*CSVPHSASSEV
Trigger: CACCTCGGAGGAGGCGCTGTGCGGCACGCTGCACAACTGGATCGACATGAAGCGGGCCCTGATGATGATGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp GCAGAGGGTCTGGTGCATCTTGAGCCGACAGGGTGCTGGTTCATCTaGCGCCCGGCTCTCTGGTGCAGTTTTGTGGGATTCAGAGGTGGG +
Preference number: 6 (lower is better)
Translates to: AEGLVHLEPTGCWFI*RPALWCSFVGFRGG
Trigger: CCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CAA 90 bp GACATTTTCAGGCTCTCGGGGTTCAGGCAGAGGGTCTGGTGCATCTaGAGCCGACAGGGTGCTGGTTCATCTTGCGCCCGGCTCTCTGGT +
Preference number: 6 (lower is better)
Translates to: DIFRLSGFRQRVWCI*SRQGAGSSCARLSG
Trigger: ACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAGAGCCTGAAAATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CAA 90 bp GTTTCCGAGTGGCTTAGGTTCAGCTTGGGGCTTGCTGTTCCGGGCTaGGGGGAGCCTTGGGTCCAGAAGAAGCCATCCGGTGAAGAGGCT +
Preference number: 6 (lower is better)
Translates to: VSEWLRFSLGLAVPG*GEPWVQKKPSGEEA
Trigger: AGCCTCTTCACCGGATGGCTTCTTCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCACTCGGAAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp CGTCGTGGACGTTGGTTTCCGAGTGGCTTAGGTTCAGCTTGGGGCTaGCTGTTCCGGGCTTGGGGGAGCCTTGGGTCCAGAAGAAGCCAT +
Preference number: 6 (lower is better)
Translates to: RRGRWFPSGLGSAWG*LFRAWGSLGSRRSH
Trigger: ATGGCTTCTTCTGGACCCAAGGCTCCCCCAAGCCCGGAACAGCAAGCCCCAAGCTGAACCTAAGCCACTCGGAAACCAACGTCCACGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp CTTGGGGGAGCCTTGGGTCCAGAAGAAGCCATCCGGTaGAGAGGCTGCCCGGCTCACTATCTTTTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: LGGALGPEEAIR*RGCPAHYLFLG
Trigger: CCCCAGAAAAAGATAGTGAGCCGGGCAGCCTCTTCACCGGATGGCTTCTTCTGGACCCAAGGCTCCCCCAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CCAGCTGGTGGTCGCTCCGCAGGCAGAAGCAGTTCTTaGAGGACCCGGGTTTCCAGATGTGCTCCACAAAGT +
Preference number: 6 (lower is better)
Translates to: PAGGRSAGRSSS*RTRVSRCAPQS
Trigger: ACTTTGTGGAGCACATCTGGAAACCCGGGTCCTGCAAGAACTGCTTCTGCCTGCGGAGCGACCACCAGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CCGACAGGGTGCTGGTTCATCTTGCGCCCGGCTCTCTaGTGCAGTTTTGTGGGATTCAGAGGTGGGTCACAG +
Preference number: 6 (lower is better)
Translates to: PTGCWFILRPAL*CSFVGFRGGSQ
Trigger: CTGTGACCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 72 bp GCAGAGGGTCTGGTGCATCTTGAGCCGACAGGGTGCTaGTTCATCTTGCGCCCGGCTCTCTGGTGCAGTTTT +
Preference number: 6 (lower is better)
Translates to: AEGLVHLEPTGC*FILRPALWCSF
Trigger: AAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 72 bp GGGCTCAAGGTTGTGCAGGCCGACCATGGTGTAAGCTaGGGGACAGCGAGAATTGCCATCAGGGGAGGTAGA +
Preference number: 6 (lower is better)
Translates to: GLKVVQADHGVS*GTARIAIRGGR
Trigger: TCTACCTCCCCTGATGGCAATTCTCGCTGTCCCCCAGCTTACACCATGGTCGGCCTGCACAACCTTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TTCTGGGCCCAGGCATTACCTGTGCATACCTGGCCTTaGCCCTGGGCAGCAGCTGCATGTTCTATCTTGGCC +
Preference number: 6 (lower is better)
Translates to: FWAQALPVHTWP*PWAAAACSILA
Trigger: GGCCAAGATAGAACATGCAGCTGCTGCCCAGGGCCAAGGCCAGGTATGCACAGGTAATGCCTGGGCCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GCTGCTTTCTGGGCCCAGGCATTACCTGTGCATACCTaGCCTTGGCCCTGGGCAGCAGCTGCATGTTCTATC +
Preference number: 6 (lower is better)
Translates to: AAFWAQALPVHT*PWPWAAAACSI
Trigger: GATAGAACATGCAGCTGCTGCCCAGGGCCAAGGCCAGGTATGCACAGGTAATGCCTGGGCCCAGAAAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp GCTGGTTCATCTTGCGCCCGGCTCTCTGGTGCAGTTTaGTGGGATTCAGAGGTGGGTCACAGAGCGGCTTCC +
Preference number: 6 (lower is better)
Translates to: AGSSCARLSGAV*WDSEVGHRAAS
Trigger: GGAAGCCGCTCTGTGACCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CAA 72 bp ACCAGCTGGTGGTCGCTCCGCAGGCAGAAGCAGTTCTaGCAGGACCCGGGTTTCCAGATGTGCTCCACAAAG +
Preference number: 6 (lower is better)
Translates to: TSWWSLRRQKQF*QDPGFQMCSTK
Trigger: CTTTGTGGAGCACATCTGGAAACCCGGGTCCTGCAAGAACTGCTTCTGCCTGCGGAGCGACCACCAGCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp CCTTGGCCCTGGGCAGCAGCTGCATGTTCTATCTTGGCCTGTGACTaGGAAGGCACCGGAGCTGCCTTCTTCCTCTTGGTGCTCTCAGCA +
Preference number: 6 (lower is better)
Translates to: PWPWAAAACSILACD*EGTGAAFFLLVLSA
Trigger: TGCTGAGAGCACCAAGAGGAAGAAGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp GCCCTGGGCAGCAGCTGCATGTTCTATCTTGGCCTGTaGCTTGGAAGGCACCGGAGCTGCCTTCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: ALGSSCMFYLGL*LGRHRSCLLPL
Trigger: AAGAGGAAGAAGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGCTGCTGCCCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp CCAGCCCTGCTGCCGGAAGCCAGTGGCCACTGCCTTTaGAAGCTTTCTCCAGAGGATCGGAAGAGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: PALLPEASGHCL*KLSPEDRKRRR
Trigger: TCTTCTCCTCTTCCGATCCTCTGGAGAAAGCTTTCAAAGGCAGTGGCCACTGGCTTCCGGCAGCAGGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GGTTCATCTTGCGCCCGGCTCTCTGGTGCAGTTTTGTaGGATTCAGAGGTGGGTCACAGAGCGGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: GSSCARLSGAVL*DSEVGHRAASS
Trigger: AGAGGAAGCCGCTCTGTGACCCACCTCTGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 72 bp GGGCAGCAGCTGCATGTTCTATCTTGGCCTGTGACTTaGAAGGCACCGGAGCTGCCTTCTTCCTCTTGGTGC +
Preference number: 6 (lower is better)
Translates to: GQQLHVLSWPVT*KAPELPSSSWC
Trigger: GCACCAAGAGGAAGAAGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGCTGCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp ACTTTGCTGTTCTGCCCAGAGGAGCCATCTGTGGGGTaGAGACGGTGCCAGGTCGTGGAGTTTGAATGGTCC +
Preference number: 6 (lower is better)
Translates to: TLLFCPEEPSVG*RRCQVVEFEWS
Trigger: GGACCATTCAAACTCCACGACCTGGCACCGTCTCCACCCCACAGATGGCTCCTCTGGGCAGAACAGCAAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp CTGGTGCATCTTGAGCCGACAGGGTGCTGGTTCATCTaGCGCCCGGCTCTCTGGTGCAGTTTTGTGGGATTC +
Preference number: 6 (lower is better)
Translates to: LVHLEPTGCWFI*RPALWCSFVGF
Trigger: GAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CAA 72 bp GCAAAAGAGGCGGATTTGCTCATCCCGGTCCCAACTTaGCTGTTCTGCCCAGAGGAGCCATCTGTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: AKEADLLIPVPT*LFCPEEPSVGW
Trigger: CCACCCCACAGATGGCTCCTCTGGGCAGAACAGCAAAGTTGGGACCGGGATGAGCAAATCCGCCTCTTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp TGGTGCATCTTGAGCCGACAGGGTGCTGGTTCATCTTaGGCCCGGCTCTCTGGTGCAGTTTTGTGGGATTCA +
Preference number: 6 (lower is better)
Translates to: WCILSRQGAGSS*ARLSGAVLWDS
Trigger: TGAATCCCACAAAACTGCACCAGAGAGCCGGGCGCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS GCA 72 bp ATTTTCAGGCTCTCGGGGTTCAGGCAGAGGGTCTGGTaGATCTTGAGCCGACAGGGTGCTGGTTCATCTTGC +
Preference number: 6 (lower is better)
Translates to: IFRLSGFRQRVW*ILSRQGAGSSC
Trigger: GCAAGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAGAGCCTGAAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS GCA 72 bp TTCTTCTGCTGCAGGTTTGGGGTGCCGCCCGGCTTCTaGTTGGCCTTCAAAAAGTTGCTGATGATGAGCCGG +
Preference number: 6 (lower is better)
Translates to: FFCCRFGVPPGF*LAFKKLLMMSR
Trigger: CCGGCTCATCATCAGCAACTTTTTGAAGGCCAAGCAGAAGCCGGGCGGCACCCCAAACCTGCAGCAGAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GACATTTTCAGGCTCTCGGGGTTCAGGCAGAGGGTCTaGTGCATCTTGAGCCGACAGGGTGCTGGTTCATCT +
Preference number: 6 (lower is better)
Translates to: DIFRLSGFRQRV*CILSRQGAGSS
Trigger: AGATGAACCAGCACCCTGTCGGCTCAAGATGCACCAGACCCTCTGCCTGAACCCCGAGAGCCTGAAAATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000615670.5
CDS CCA 72 bp CTGTCCACACATCAGAGGCCTCGGAGCTCATCATGGTaGGCTTCACGGCAATTGTGGGCTTGGAGTAAGGTG +
Preference number: 6 (lower is better)
Translates to: LSTHQRPRSSSW*ASRQLWAWSKV
Trigger: CACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCACCATGATGAGCTCCGAGGCCTCTGATGTGTGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp TGCCGGGGTCCTCAGAGCAGGTGGCACAGTAATAAATaGCATCCCCCGAGTCACAGCAGGGCTTGTTACAAG +
Preference number: 6 (lower is better)
Translates to: CRGPQSRWHSNK*HPPSHSRACYK
Trigger: CTTGTAACAAGCCCTGCTGTGACTCGGGGGATGCCATTTATTACTGTGCCACCTGCTCTGAGGACCCCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp TGGGCAGCAGCTGCATGTTCTATCTTGGCCTGTGACTaGGAAGGCACCGGAGCTGCCTTCTTCCTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: WAAAACSILACD*EGTGAAFFLLV
Trigger: CACCAAGAGGAAGAAGGCAGCTCCGGTGCCTTCCAAGTCACAGGCCAAGATAGAACATGCAGCTGCTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS TCA 72 bp GGTGGGCTTCACGGCAATTGTGGGCTTGGAGTAAGGTaGGCTGTTCACACCTTCATCTTCCAGGCGGCAGTT +
Preference number: 6 (lower is better)
Translates to: GGLHGNCGLGVR*AVHTFIFQAAV
Trigger: AACTGCCGCCTGGAAGATGAAGGTGTGAACAGCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CAAAGGCAGCCAGTTTCTGGCGGAAGCTCTCCTGGGTaGAGGGCCGGTCTTGGTAAGGAAATGAGGGTTTTT +
Preference number: 6 (lower is better)
Translates to: QRQPVSGGSSPG*RAGLGKEMRVF
Trigger: AAAAACCCTCATTTCCTTACCAAGACCGGCCCTCCACCCAGGAGAGCTTCCGCCAGAAACTGGCTGCCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp ATCCCACTTCTGTCCTTGGGGAACTCAAAGGCAAAAGAGGCGGATTaGCTCATCCCGGTCCCAACTTTGCTGTTCTGCCCAGAGGAGCCA +
Preference number: 6 (lower is better)
Translates to: IPLLSLGNSKAKEAD*LIPVPTLLFCPEEP
Trigger: TGGCTCCTCTGGGCAGAACAGCAAAGTTGGGACCGGGATGAGCAAATCCGCCTCTTTTGCCTTTGAGTTCCCCAAGGACAGAAGTGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp CCTCGGAGCTCATCATGGTGGGCTTCACGGCAATTGTaGGCTTGGAGTAAGGTGAGCTGTTCACACCTTCAT +
Preference number: 6 (lower is better)
Translates to: PRSSSWWASRQL*AWSKVSCSHLH
Trigger: ATGAAGGTGTGAACAGCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCACCATGATGAGCTCCGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp CTGTCCTTGGGGAACTCAAAGGCAAAAGAGGCGGATTaGCTCATCCCGGTCCCAACTTTGCTGTTCTGCCCA +
Preference number: 6 (lower is better)
Translates to: LSLGNSKAKEAD*LIPVPTLLFCP
Trigger: TGGGCAGAACAGCAAAGTTGGGACCGGGATGAGCAAATCCGCCTCTTTTGCCTTTGAGTTCCCCAAGGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS GCA 72 bp CAGAAGCAGTTCTTGCAGGACCCGGGTTTCCAGATGTaGTCCACAAAGTCACTGCACGCAGACATTTTCAGG +
Preference number: 6 (lower is better)
Translates to: QKQFLQDPGFQM*STKSLHADIFR
Trigger: CCTGAAAATGTCTGCGTGCAGTGACTTTGTGGAGCACATCTGGAAACCCGGGTCCTGCAAGAACTGCTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp AGCTCATCATGGTGGGCTTCACGGCAATTGTGGGCTTaGAGTAAGGTGAGCTGTTCACACCTTCATCTTCCA +
Preference number: 6 (lower is better)
Translates to: SSSWWASRQLWA*SKVSCSHLHLP
Trigger: TGGAAGATGAAGGTGTGAACAGCTCACCTTACTCCAAGCCCACAATTGCCGTGAAGCCCACCATGATGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GTCAGCTTGAAGAGCGACCAGTTATTCTCATTGAAGTaGAGCTCCTTTTTCTGGCCGCCCATGAAGAGGTCC +
Preference number: 6 (lower is better)
Translates to: VSLKSDQLFSLK*SSFFWPPMKRS
Trigger: GGACCTCTTCATGGGCGGCCAGAAAAAGGAGCTCCACTTCAATGAGAATAACTGGTCGCTCTTCAAGCTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp TCCCCCGAGTCACAGCAGGGCTTGTTACAAGTCAGCTaGAAGAGCGACCAGTTATTCTCATTGAAGTGGAGC +
Preference number: 6 (lower is better)
Translates to: SPESQQGLLQVS*KSDQLFSLKWS
Trigger: GCTCCACTTCAATGAGAATAACTGGTCGCTCTTCAAGCTGACTTGTAACAAGCCCTGCTGTGACTCGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 90 bp CAGGGCTTGTTACAAGTCAGCTTGAAGAGCGACCAGTTATTCTCATaGAAGTGGAGCTCCTTTTTCTGGCCGCCCATGAAGAGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: QGLLQVSLKSDQLFS*KWSSFFWPPMKRSS
Trigger: TGAGGACCTCTTCATGGGCGGCCAGAAAAAGGAGCTCCACTTCAATGAGAATAACTGGTCGCTCTTCAAGCTGACTTGTAACAAGCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GAGGAGGTGAGAATGTCTCAATCCCACTTCTGTCCTTaGGGAACTCAAAGGCAAAAGAGGCGGATTTGCTCA +
Preference number: 6 (lower is better)
Translates to: EEVRMSQSHFCP*GTQRQKRRICS
Trigger: TGAGCAAATCCGCCTCTTTTGCCTTTGAGTTCCCCAAGGACAGAAGTGGGATTGAGACATTCTCACCTCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CCA 72 bp GACCAGTTATTCTCATTGAAGTGGAGCTCCTTTTTCTaGCCGCCCATGAAGAGGTCCTCACATTTGGCTACA +
Preference number: 6 (lower is better)
Translates to: DQLFSLKWSSFF*PPMKRSSHLAT
Trigger: TGTAGCCAAATGTGAGGACCTCTTCATGGGCGGCCAGAAAAAGGAGCTCCACTTCAATGAGAATAACTGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1
CDS CAA 72 bp TTACAAGTCAGCTTGAAGAGCGACCAGTTATTCTCATaGAAGTGGAGCTCCTTTTTCTGGCCGCCCATGAAG +
Preference number: 6 (lower is better)
Translates to: LQVSLKSDQLFS*KWSSFFWPPMK
Trigger: CTTCATGGGCGGCCAGAAAAAGGAGCTCCACTTCAATGAGAATAACTGGTCGCTCTTCAAGCTGACTTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000615670.5
ENST00000622241.1