RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPWD1 (Homo sapiens)

Ensembl gene IDs: ENSG00000113593

Ensembl transcript IDs: ENST00000261308.10, ENST00000502703.5, ENST00000503435.5, ENST00000508982.1, ENST00000510930.5, ENST00000511334.1, ENST00000511908.5, ENST00000513773.1, ENST00000514172.1, ENST00000515447.5, ENST00000535264.5, ENST00000538977.5

Found 228 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAGTTTTCCACTGTCTTAGGGCACTCAACAGGAAAAAGTTTGGTGTaGATGTCTCCCATGCTGGTGTGGATAATGGCACTGTCCGAAACT +
Preference number: 1 (lower is better)
Translates to: KFSTVLGHSTGKSLV*MSPMLVWIMALSET
Trigger: AGTTTCGGACAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAACTTTTTCCTGTTGAGTGCCCTAAGACAGTGGAAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR GCA 90 bp CGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACTGTTaGCTCATCTGTTGCAGTTCAGTAAACATGCTTAGTGATTCATCA +
Preference number: 1 (lower is better)
Translates to: RSTAIRRPNSMSGNC*LICCSSVNMLSDSS
Trigger: TGATGAATCACTAAGCATGTTTACTGAACTGCAACAGATGAGGCAACAGTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR CCA 90 bp TGCTTATTATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTaGGATCCATTAGTATTTGATCCCGCGTTAGCCATGCTGAGTGTG +
Preference number: 1 (lower is better)
Translates to: CLLSSQGVGTTVMKN*DPLVFDPALAMLSV
Trigger: CACACTCAGCATGGCTAACGCGGGATCAAATACTAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGATAATAAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR TCA 90 bp TTAGCCATGCTGAGTGTGTATGGCCTGTCATGTCGTAATGTTGAATaGAATTCATCTTCAAATTCTCCTCCCCATATGCTTTCTCCTCCC +
Preference number: 1 (lower is better)
Translates to: LAMLSVYGLSCRNVE*NSSSNSPPHMLSPP
Trigger: GGGAGGAGAAAGCATATGGGGAGGAGAATTTGAAGATGAATTTCATTCAACATTACGACATGACAGGCCATACACACTCAGCATGGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR TCA 90 bp GTGTGGATAATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTaGGTAGCTGCCATGACTTCTTCTTTAGAAGGTTTCTCATTAAAA +
Preference number: 1 (lower is better)
Translates to: VWIMALSETRLGPSA*VAAMTSSLEGFSLK
Trigger: TTTTAATGAGAAACCTTCTAAAGAAGAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATTATCCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR GCA 90 bp AATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTGAGTAGCTaGCATGACTTCTTCTTTAGAAGGTTTCTCATTAAAAACATCTCG +
Preference number: 1 (lower is better)
Translates to: NGTVRNSFRSFSLSS*HDFFFRRFLIKNIS
Trigger: CGAGATGTTTTTAATGAGAAACCTTCTAAAGAAGAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR GCA 90 bp GTCGTAATGTTGAATGAAATTCATCTTCAAATTCTCCTCCCCATATaGTTTCTCCTCCCATACCAGTACCTGTTGGATCTCCAGTCTGAA +
Preference number: 1 (lower is better)
Translates to: VVMLNEIHLQILLPI*FLLPYQYLLDLQSE
Trigger: TTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGGGAGGAGAATTTGAAGATGAATTTCATTCAACATTACGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR CCA 90 bp AAATTCTCCTCCCCATATGCTTTCTCCTCCCATACCAGTACCTGTTaGATCTCCAGTCTGAATCATAAAGCCCTTAATTATACGGTGAAA +
Preference number: 1 (lower is better)
Translates to: KFSSPYAFSSHTSTC*ISSLNHKALNYTVK
Trigger: TTTCACCGTATAATTAAGGGCTTTATGATTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGGGAGGAGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp GTGGATAATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTGAGTAGCTGCTTCGGAAGCAGCAACTaGAGAAATTGCATCCCCTGG +
Preference number: 2 (lower is better)
Translates to: VDNGTVRNSFRSFSLSSCFGSSN*RNCIPW
Trigger: CCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAA...GCAGCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATTATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CCA 90 bp CCCATATGCTTTCTCCTCCCATACCAGTACCTGTTGGATCTCCAGTCTGAATCATCTCCCATGCTGGTGTaGATAATGGCACTGTCCGAA +
Preference number: 2 (lower is better)
Translates to: PICFLLPYQYLLDLQSESSPMLV*IMALSE
Trigger: TTCGGACAGTGCCATTATCCACACCAGCATGGGAGA...TGATTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp TTTGGTGTGAATGTCTCCCATGCTGGTGTGGATAATGGCACTGTCCGAAACTCGGGGAATTTATATTCATaGGGAGGCCCAGTCCAGTAT +
Preference number: 2 (lower is better)
Translates to: FGVNVSHAGVDNGTVRNSGNLYS*GGPVQY
Trigger: ATACTGGACTGGGCCTCCTCATGAATATAAATTCCC...CGAGTTTCGGACAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp CTTAGGGCACTCAACAGGAAAAAGTTTGGTGTGAATGTCTCCCATGCTGGTGTGGCGCTCATACATGGATaGACTGGGGAGATTATCAAG +
Preference number: 2 (lower is better)
Translates to: LRALNRKKFGVNVSHAGVALIHG*TGEIIK
Trigger: CTTGATAATCTCCCCAGTGCATCCATGTATGAGCGC...CACACCAGCATGGGAGACATTCACACCAAACTTTTTCCTGTTGAGTGCCCTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510930.5
3UTR-3UTR CCA 90 bp ACCTTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAGAAATTGCATCCCCTaGGCAATAGATCCACTCACA +
Preference number: 2 (lower is better)
Translates to: TFSNSRSTAIRRPNSMSGRNCIP*AIDPLT
Trigger: TGTGAGTGGATCTATTGCCCAGGGGATGCAATTTCT...ACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp ATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGAGATCCTCTGGGAAAAAGTTTGGTGTaGATGTCTCCCATGCTGGTG +
Preference number: 2 (lower is better)
Translates to: ILIGLICFGIDFDVGDPLGKSLV*MSPMLV
Trigger: CACCAGCATGGGAGACATTCACACCAAACTTTTTCC...CAGAGGATCTCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp ATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGAGATCCTCTGGGATCCATTAGTATTTaGTCCCGCGTTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: ILIGLICFGIDFDVGDPLGSISI*SRVSHA
Trigger: AGCATGGCTAACGCGGGATCAAATACTAATGGATCC...CAGAGGATCTCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp GTGGATAATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTGAGTAGCTGCATCTCGATCAGAATCTaGACTTTTCGTATCTTCTGG +
Preference number: 2 (lower is better)
Translates to: VDNGTVRNSFRSFSLSSCISIRI*TFRIFW
Trigger: CCAGAAGATACGAAAAGTGCAGATTCTGATCGAGAT...GCAGCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATTATCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CCA 90 bp CCCATATGCTTTCTCCTCCCATACCAGTACCTGTTGGATCTCCAGTCTGAATCAAAAACATACGCTGGTTaGATAAGCCTTACACTTGGC +
Preference number: 2 (lower is better)
Translates to: PICFLLPYQYLLDLQSESKTYAG*ISLTLG
Trigger: GCCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTT...TGATTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CCA 90 bp GTGAACACAGAAGTTTTCCACTGTCTTAGGGCACTCAACAGGAAAAAGTTTGGTCAGCACGATGCTTTTTaGCTATCCCCTGGAACAAAG +
Preference number: 2 (lower is better)
Translates to: VNTEVFHCLRALNRKKFGQHDAF*LSPGTK
Trigger: CTTTGTTCCAGGGGATAGCCAAAAAGCATCGTGCTG...ACCAAACTTTTTCCTGTTGAGTGCCCTAAGACAGTGGAAAACTTCTGTGTTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR CAA 90 bp GGTGTGGATAATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTaGAGTAGCTGCCATGACTTCTTCTTTAGAAGGTTTCTCATTAAA +
Preference number: 2 (lower is better)
Translates to: GVDNGTVRNSFRSFS*SSCHDFFFRRFLIK
Trigger: TTTAATGAGAAACCTTCTAAAGAAGAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATTATCCACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACCAAGTTTCAGCATGTTaGTCATGTCAAAGTTCACTA +
Preference number: 2 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNQVSAC*SCQSSL
Trigger: TAGTGAACTTTGACATGATCAACATGCTGAAACTTG...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp CCCATATGCTTTCTCCTCCCATACCAGTACCTGTTGGATCTCCAGTCTGAATCACTCGGCCATCATAAATaGAAATTTTTCCTGTACTCT +
Preference number: 2 (lower is better)
Translates to: PICFLLPYQYLLDLQSESLGHHK*KFFLYS
Trigger: AGAGTACAGGAAAAATTTTCATTTATGATGGCCGAG...TGATTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp ATTTTTGGGGAATTTATATTCATGAGGAGGCCCAGTCCAGTATTCAATCATCCCGGGTTTAGCCGTATCTaGGTAAGAGGTGATGTATGG +
Preference number: 2 (lower is better)
Translates to: IFGEFIFMRRPSPVFNHPGFSRI*VRGDVW
Trigger: CCATACATCACCTCTTACTCAGATACGGCTAAACCC...GGGATGATTGAATACTGGACTGGGCCTCCTCATGAATATAAATTCCCCAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp GATGCTGACATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGATCCCTCAGAGCTAACTaGAATACTCTCAATAACTCC +
Preference number: 2 (lower is better)
Translates to: DADILIGLICFGIDFDVGSLRAN*NTLNNS
Trigger: GGAGTTATTGAGAGTATTGCAGTTAGCTCTGAGGGA...TCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGATGTCAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp GATGCTGACATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGAATGTCTGGTAACTGTTaGCTCATCTGTTGCAGTTCA +
Preference number: 2 (lower is better)
Translates to: DADILIGLICFGIDFDVGMSGNC*LICCSS
Trigger: TGAACTGCAACAGATGAGGCAACAGTTACCAGACAT...TCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGATGTCAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp ATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTCTTAGGGCATTCGGAAGCAGCAACTaGAGAAATTGCATCCCCTGG +
Preference number: 2 (lower is better)
Translates to: IIITISAVNTEVFHCLRAFGSSN*RNCIPW
Trigger: CCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAA...TGCCCTAAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp TTATTATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTACACAGAACAGAACAATaGTCCCTCAGAGCTAACTGC +
Preference number: 2 (lower is better)
Translates to: LLSSQGVGTTVMKNWDPLHRTEQ*SLRANC
Trigger: GCAGTTAGCTCTGAGGGAGCATTGTTCTGTTCTGTG...TAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGATAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp ACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACCTCTATGCATGTAACTaGGCTCATACATGGATGCAC +
Preference number: 2 (lower is better)
Translates to: TSRSESALFVSSGSRLVNLYACN*AHTWMH
Trigger: GTGCATCCATGTATGAGCGCAGTTACATGCATAGAG...GTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
3UTR-3UTR CCA 90 bp ATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGAGATCCTCTGCATACATGGATGCACTaGGGAGATTATCAAGATAGA +
Preference number: 2 (lower is better)
Translates to: ILIGLICFGIDFDVGDPLHTWMH*GDYQDR
Trigger: TCTATCTTGATAATCTCCCCAGTGCATCCATGTATG...CAGAGGATCTCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
3UTR-3UTR CCA 90 bp ATTTTTGGGGAATTTATATTCATGAGGAGGCCCAGTCCAGTATTCAATCATCCCAACTGCGCTCATACATaGATGCACTGGGGAGATTAT +
Preference number: 2 (lower is better)
Translates to: IFGEFIFMRRPSPVFNHPNCAHT*MHWGDY
Trigger: ATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTT...GGGATGATTGAATACTGGACTGGGCCTCCTCATGAATATAAATTCCCCAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510930.5
3UTR-3UTR TCA 90 bp GATGCTGACATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGATATCTGAGTAAGAGGTaGTGTATGGAGTTTGTCAAA +
Preference number: 2 (lower is better)
Translates to: DADILIGLICFGIDFDVGYLSKR*CMEFVK
Trigger: TTTGACAAACTCCATACATCACCTCTTACTCAGATA...TCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGATGTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp TTATTATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTATTTCTTCCCATCTGGTaGAAAACATACGCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: LLSSQGVGTTVMKNWDPLFLPIW*KTYAGW
Trigger: CCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAA...TAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGATAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp CTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTAGGATCCATTAGTATTTaGTCCCGCGTTAGCCATGCT +
Preference number: 2 (lower is better)
Translates to: LCTTSIPLVTRPNTVCLLGSISI*SRVSHA
Trigger: AGCATGGCTAACGCGGGATCAAATACTAATGGATCC...TAATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp ATGCCCATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTCTTATTCTCCTCCCCATATaGTTTCTCCTCCCATACCAG +
Preference number: 2 (lower is better)
Translates to: MPIIITISAVNTEVFHCLILLPI*FLLPYQ
Trigger: CTGGTATGGGAGGAGAAAGCATATGGGGAGGAGAAT...AAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAATGGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp TGTATGCCCATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTGGGAATTTATATTCATaGGGAGGCCCAGTCCAGTAT +
Preference number: 2 (lower is better)
Translates to: CMPIIITISAVNTEVFHCGNLYS*GGPVQY
Trigger: ATACTGGACTGGGCCTCCTCATGAATATAAATTCCC...ACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAATGGGCATACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp CCTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTTCCCTCAGAGCTAACTaGAATACTCTCAATAACTCC +
Preference number: 2 (lower is better)
Translates to: PLYNFHSFSHSSKYCMLISLRAN*NTLNNS
Trigger: GGAGTTATTGAGAGTATTGCAGTTAGCTCTGAGGGA...AATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR GCA 90 bp ATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTAGTATTCGTCCAAATACTGTATaGTTATTATCAAGCCAAGGC +
Preference number: 2 (lower is better)
Translates to: IKPRRWYYRYEKLGSISIRPNTV*LLSSQG
Trigger: GCCTTGGCTTGATAATAAGCATACAGTATTTGGACG...AATACTAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CCA 90 bp CTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTAGTCAAAAATATGAAGTaGCTGGTTATCTCCTCGGCC +
Preference number: 2 (lower is better)
Translates to: LCTTSIPLVTRPNTVCLLVKNMK*LVISSA
Trigger: GGCCGAGGAGATAACCAGCCACTTCATATTTTTGAC...TAATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR TCA 90 bp ATTTTTGGGGAATTTATATTCATGAGGAGGCCCAGTCCAGTATTCAATCATCCCTATCTGAGTAAGAGGTaGTGTATGGAGTTTGTCAAA +
Preference number: 2 (lower is better)
Translates to: IFGEFIFMRRPSPVFNHPYLSKR*CMEFVK
Trigger: TTTGACAAACTCCATACATCACCTCTTACTCAGATA...GGGATGATTGAATACTGGACTGGGCCTCCTCATGAATATAAATTCCCCAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CCA 90 bp ATGCCCATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTCTTTTTTTGGCTATCCCCTaGAACAAAGCCAATTGCATC +
Preference number: 2 (lower is better)
Translates to: MPIIITISAVNTEVFHCLFLAIP*NKANCI
Trigger: GATGCAATTGGCTTTGTTCCAGGGGATAGCCAAAAA...AAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAATGGGCAT
39% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CCA 90 bp CTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTAGTGAAAAACATACGCTaGTTGGATAAGCCTTACACT +
Preference number: 2 (lower is better)
Translates to: LCTTSIPLVTRPNTVCLLVKNIR*LDKPYT
Trigger: AGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCAC...TAATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CCA 90 bp AACATGCTTAGTGATTCATCAAAGACTCTCATGAGTTTTCCAGTTACAAATCTGTTGGTGCATACCACATaGGTGATAACATCTCTATGC +
Preference number: 2 (lower is better)
Translates to: NMLSDSSKTLMSFPVTNLLVHTT*VITSLC
Trigger: GCATAGAGATGTTATCACCCATGTGGTATGCACCAA...CAGATTTGTAACTGGAAAACTCATGAGAGTCTTTGATGAATCACTAAGCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
3UTR-3UTR TCA 90 bp CTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTACAAGTTTCAGCATGTTaGTCATGTCAAAGTTCACTA +
Preference number: 2 (lower is better)
Translates to: LCTTSIPLVTRPNTVCLLQVSAC*SCQSSL
Trigger: TAGTGAACTTTGACATGATCAACATGCTGAAACTTG...TAATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp TTTGGTGTGAATGTCTCCCATGCTGGTGTGGATAATGGCACTGTCCGAAACTCGCTGTTGCCTCATCTGTaGCAGTTCAGTAAACATGCT +
Preference number: 3 (lower is better)
Translates to: FGVNVSHAGVDNGTVRNSLLPHL*QFSKHA
Trigger: AGCATGTTTACTGAACTGCAACAGATGAGGCAACAG...CGAGTTTCGGACAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp ACCTTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTTCAATCATCCCAGATTaGTCAGAAGACACTACTGCT +
Preference number: 3 (lower is better)
Translates to: TFSNSRSTAIRRPNSMSGSIIPD*SEDTTA
Trigger: AGCAGTAGTGTCTTCTGACAAATCTGGGATGATTGA...ACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR TCA 72 bp ACTGTCTTAGGGCACTCAACAGGAAAAAGTTTGGTGTaGATGTCTCCCATGCTGGTGTGGATAATGGCACTG +
Preference number: 3 (lower is better)
Translates to: TVLGHSTGKSLV*MSPMLVWIMAL
Trigger: CAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAACTTTTTCCTGTTGAGTGCCCTAAGACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR TCA 72 bp ATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTaGGTAGCTGCCATGACTTCTTCTTTAGAAGGTTTC +
Preference number: 3 (lower is better)
Translates to: MALSETRLGPSA*VAAMTSSLEGF
Trigger: GAAACCTTCTAAAGAAGAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR GCA 72 bp GCCATTCGTCGGCCAAATTCCATGTCTGGTAACTGTTaGCTCATCTGTTGCAGTTCAGTAAACATGCTTAGT +
Preference number: 3 (lower is better)
Translates to: AIRRPNSMSGNC*LICCSSVNMLS
Trigger: ACTAAGCATGTTTACTGAACTGCAACAGATGAGGCAACAGTTACCAGACATGGAATTTGGCCGACGAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp GGTGTGGATAATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTGAGTAGCCTGGAACAAAGCCAATaGCATCACTCTAATATTTTC +
Preference number: 3 (lower is better)
Translates to: GVDNGTVRNSFRSFSLSSLEQSQ*HHSNIF
Trigger: GAAAATATTAGAGTGATGCAATTGGCTTTGTTCCAG...GCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATTATCCACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp CTTAGGGCACTCAACAGGAAAAAGTTTGGTGTGAATGTCTCCCATGCTGGTGTGCTGGAACAAAGCCAATaGCATCACTCTAATATTTTC +
Preference number: 3 (lower is better)
Translates to: LRALNRKKFGVNVSHAGVLEQSQ*HHSNIF
Trigger: GAAAATATTAGAGTGATGCAATTGGCTTTGTTCCAG...CACACCAGCATGGGAGACATTCACACCAAACTTTTTCCTGTTGAGTGCCCTAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp CCCATATGCTTTCTCCTCCCATACCAGTACCTGTTGGATCTCCAGTCTGAATCAATGTACAGACTATTGTaGGGTCAGCTTGAATATTCT +
Preference number: 3 (lower is better)
Translates to: PICFLLPYQYLLDLQSESMYRLL*GQLEYS
Trigger: AGAATATTCAAGCTGACCCAACAATAGTCTGTACAT...TGATTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp AAGTTTGGTGTGAATGTCTCCCATGCTGGTGTGGATAATGGCACTGTCCGAAACATGATGTACAGACTATaGTTGGGTCAGCTTGAATAT +
Preference number: 3 (lower is better)
Translates to: KFGVNVSHAGVDNGTVRNMMYRL*LGQLEY
Trigger: ATATTCAAGCTGACCCAACAATAGTCTGTACATCAT...GTTTCGGACAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR GCA 72 bp TCAGAAGCTTTCATTTCTATAGTAGTTGCAGCACGATaGTTTTTGGCTATCCCCTGGAACAAAGCCAATTGC +
Preference number: 3 (lower is better)
Translates to: SEAFISIVVAAR*FLAIPWNKANC
Trigger: GCAATTGGCTTTGTTCCAGGGGATAGCCAAAAAGCATCGTGCTGCAACTACTATAGAAATGAAAGCTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR CCA 72 bp TCCCCATATGCTTTCTCCTCCCATACCAGTACCTGTTaGATCTCCAGTCTGAATCATAAAGCCCTTAATTAT +
Preference number: 3 (lower is better)
Translates to: SPYAFSSHTSTC*ISSLNHKALNY
Trigger: ATAATTAAGGGCTTTATGATTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp CCTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTTTTAGGTCCTTCAGCTaGAGTAGCTGCCATGACTTC +
Preference number: 3 (lower is better)
Translates to: PLYNFHSFSHSSKYCMLIFRSFS*SSCHDF
Trigger: GAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAAA...AATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp ATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTAGTATTGGATTGACTTTGACGTaGGAGATCCTCTGTACAACT +
Preference number: 3 (lower is better)
Translates to: IKPRRWYYRYEKLGSISIGLTLT*EILCTT
Trigger: AGTTGTACAGAGGATCTCCAACGTCAAAGTCAATCC...AATACTAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR GCA 72 bp TTGAATGAAATTCATCTTCAAATTCTCCTCCCCATATaGTTTCTCCTCCCATACCAGTACCTGTTGGATCTC +
Preference number: 3 (lower is better)
Translates to: LNEIHLQILLPI*FLLPYQYLLDL
Trigger: GAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGGGAGGAGAATTTGAAGATGAATTTCATTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR GCA 72 bp ACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATaGTTATTATCAAGCCAAGGCGTTGGTACTACCGTT +
Preference number: 3 (lower is better)
Translates to: TSIPLVTRPNTV*LLSSQGVGTTV
Trigger: AACGGTAGTACCAACGCCTTGGCTTGATAATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR CCA 72 bp CTCTATGCATGTAACTGCGCTCATACATGGATGCACTaGGGAGATTATCAAGATAGACTCTTTCAAACTCTA +
Preference number: 3 (lower is better)
Translates to: LYACNCAHTWMH*GDYQDRLFQTL
Trigger: TAGAGTTTGAAAGAGTCTATCTTGATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTTACATGCATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510930.5
3UTR-3UTR CAA 90 bp CTATTTTCTTCCCATCTGGTGAAAAACATACGCTGGTTGGATAAGCCTTACACTCATCAAACACCTTCATaGCTTTATCATCACCCACAG +
Preference number: 3 (lower is better)
Translates to: LFSSHLVKNIRWLDKPYTHQTPS*LYHHPQ
Trigger: CTGTGGGTGATGATAAAGCAATGAAGGTGTTTGATG...AGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp AACATGCTTAGTGATTCATCAAAGACTCTCATGAGTTTTCCAGTTACAAATCTGCAGCAACTGAAGAAATaGCATCCCCTGGGCAATAGA +
Preference number: 3 (lower is better)
Translates to: NMLSDSSKTLMSFPVTNLQQLKK*HPLGNR
Trigger: TCTATTGCCCAGGGGATGCAATTTCTTCAGTTGCTG...CAGATTTGTAACTGGAAAACTCATGAGAGTCTTTGATGAATCACTAAGCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR TCA 72 bp CACACTGTCCAGGAAAATAGCCAAGTTTCAGCATGTTaGTCATGTCAAAGTTCACTACATCAAACACCTTCA +
Preference number: 3 (lower is better)
Translates to: HTVQENSQVSAC*SCQSSLHQTPS
Trigger: TGAAGGTGTTTGATGTAGTGAACTTTGACATGATCAACATGCTGAAACTTGGCTATTTTCCTGGACAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
3UTR GCA 72 bp AACATCTCTATGCATGTAACTGCGCTCATACATGGATaGACTGGGGAGATTATCAAGATAGACTCTTTCAAA +
Preference number: 3 (lower is better)
Translates to: NISMHVTALIHG*TGEIIKIDSFK
Trigger: TTTGAAAGAGTCTATCTTGATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTTACATGCATAGAGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
3UTR TCA 72 bp ATCAGAACCAATAGTAGCTATTTTCTTCCCATCTGGTaGAAAACATACGCTGGTTGGATAAGCCTTACACTT +
Preference number: 3 (lower is better)
Translates to: IRTNSSYFLPIW*KTYAGWISLTL
Trigger: AAGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAAATAGCTACTATTGGTTCTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR-3UTR CAA 90 bp AACATGCTTAGTGATTCATCAAAGACTCTCATGAGTTTTCCAGTTACAAATCTGAAAAACATACGCTGGTaGGATAAGCCTTACACTTGG +
Preference number: 3 (lower is better)
Translates to: NMLSDSSKTLMSFPVTNLKNIRW*DKPYTW
Trigger: CCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTTT...CAGATTTGTAACTGGAAAACTCATGAGAGTCTTTGATGAATCACTAAGCATGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR GCA 72 bp AGAAGGTTTCTCATTAAAAACATCTCGATCAGAATCTaGACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAA +
Preference number: 3 (lower is better)
Translates to: RRFLIKNISIRI*TFRIFWFSFGK
Trigger: TTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAAACCTTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR GCA 90 bp GGTGTGGATAATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTGAGTAGCCACCGCCACTGCTACTaGCAGCTCTCTTTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: GVDNGTVRNSFRSFSLSSHRHCY*QLSFAE
Trigger: CTCAGCGAAAGAGAGCTGGCAGTAGCAGTGGCGGTG...GCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATTATCCACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp CTGTACTCTTTTCGGAAGCAGCAACTGAAGAAATTGCATCCCCTGGGCAATAGACACCGCCACTGCTACTaGCAGCTCTCTTTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: LYSFRKQQLKKLHPLGNRHRHCY*QLSFAE
Trigger: CTCAGCGAAAGAGAGCTGGCAGTAGCAGTGGCGGTG...TCTATTGCCCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAAAAGAGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp CTGTACTCTTTTCGGAAGCAGCAACTGAAGAAATTGCATCCCCTGGGCAATAGATCCTCATCGTTCTCCTaGGACACCGCCACTGCTACT +
Preference number: 4 (lower is better)
Translates to: LYSFRKQQLKKLHPLGNRSSSFS*DTATAT
Trigger: AGTAGCAGTGGCGGTGTCCCAGGAGAACGATGAGGA...TCTATTGCCCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAAAAGAGTACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACCTGCTTTCCTCTTCTTaGCCAGTGTTGCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNLLSSS*PVLPPQ
Trigger: CTGTGGAGGCAACACTGGCCAAGAAGAGGAAAGCAG...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR TCA 90 bp ACCTTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTCTTCTACGTCTCTGCTaGAAATCGCTACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: TFSNSRSTAIRRPNSMSGLLRLC*KSLPLS
Trigger: GGAAAGTGGTAGCGATTTTCAGCAGAGACGTAGAAG...ACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp TTTGGTGTGAATGTCTCCCATGCTGGTGTGGATAATGGCACTGTCCGAAACTCGCACAGAACAGAACAATaGTCCCTCAGAGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: FGVNVSHAGVDNGTVRNSHRTEQ*SLRANC
Trigger: GCAGTTAGCTCTGAGGGAGCATTGTTCTGTTCTGTG...CGAGTTTCGGACAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACGTAGTTGCAGCACGATaGTTTTTGGCTATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNVVAAR*FLAIPW
Trigger: CCAGGGGATAGCCAAAAAGCATCGTGCTGCAACTAC...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp GGTGTGGATAATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTGAGTAGCCAGCACGATGCTTTTTaGCTATCCCCTGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: GVDNGTVRNSFRSFSLSSQHDAF*LSPGTK
Trigger: CTTTGTTCCAGGGGATAGCCAAAAAGCATCGTGCTG...GCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATTATCCACACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp CTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACTGTTGCCTCATCTGTTTCTCCCATGCTGGTGTaGATAATGGCACTGTCCGAA +
Preference number: 4 (lower is better)
Translates to: LQPFVGQIPCLVTVASSVSPMLV*IMALSE
Trigger: TTCGGACAGTGCCATTATCCACACCAGCATGGGAGA...AACAGATGAGGCAACAGTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CCCATATGCTTTCTCCTCCCATACCAGTACCTGTTGGATCTCCAGTCTGAATCATTAGGTCCTTCAGCTTaGGTAGCTGCCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: PICFLLPYQYLLDLQSESLGPSA*VAAMTS
Trigger: AGAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAA...TGATTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CCCATATGCTTTCTCCTCCCATACCAGTACCTGTTGGATCTCCAGTCTGAATCAGGATCCATTAGTATTTaGTCCCGCGTTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PICFLLPYQYLLDLQSESGSISI*SRVSHA
Trigger: AGCATGGCTAACGCGGGATCAAATACTAATGGATCC...TGATTCAGACTGGAGATCCAACAGGTACTGGTATGGGAGGAGAAAGCATATGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACATTCTCCTCCCCATATaGTTTCTCCTCCCATACCAG +
Preference number: 4 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNILLPI*FLLPYQ
Trigger: CTGGTATGGGAGGAGAAAGCATATGGGGAGGAGAAT...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp AAGTTTGGTGTGAATGTCTCCCATGCTGGTGTGGATAATGGCACTGTCCGAAACAGAAATTGCATCCCCTaGGCAATAGATCCACTCACA +
Preference number: 4 (lower is better)
Translates to: KFGVNVSHAGVDNGTVRNRNCIP*AIDPLT
Trigger: TGTGAGTGGATCTATTGCCCAGGGGATGCAATTTCT...GTTTCGGACAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp CTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACTGTTGCCTCATCTGTTGTCAAAAATATGAAGTaGCTGGTTATCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LQPFVGQIPCLVTVASSVVKNMK*LVISSA
Trigger: GGCCGAGGAGATAACCAGCCACTTCATATTTTTGAC...AACAGATGAGGCAACAGTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CTGTACTCTTTTCGGAAGCAGCAACTGAAGAAATTGCATCCCCTGGGCAATAGAGGGAATTTATATTCATaGGGAGGCCCAGTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: LYSFRKQQLKKLHPLGNRGNLYS*GGPVQY
Trigger: ATACTGGACTGGGCCTCCTCATGAATATAAATTCCC...TCTATTGCCCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAAAAGAGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCCACCGCCACTGCTACTaGCAGCTCTCTTTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLHRHCY*QLSFAE
Trigger: CTCAGCGAAAGAGAGCTGGCAGTAGCAGTGGCGGTG...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR GCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCCTGGGACACCGCCACTaGTACTGCCAGCTCTCTTTC +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLLGHRH*YCQLSF
Trigger: GAAAGAGAGCTGGCAGTAGCAGTGGCGGTGTCCCAG...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR GCA 90 bp GATGCTGACATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGAGCGCTCATACATGGATaGACTGGGGAGATTATCAAG +
Preference number: 4 (lower is better)
Translates to: DADILIGLICFGIDFDVGALIHG*TGEIIK
Trigger: CTTGATAATCTCCCCAGTGCATCCATGTATGAGCGC...TCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGATGTCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR CCA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACAAAACATACGCTGGTTaGATAAGCCTTACACTTGGC +
Preference number: 4 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNKTYAG*ISLTLG
Trigger: GCCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTT...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp AAGTTTGGTGTGAATGTCTCCCATGCTGGTGTGGATAATGGCACTGTCCGAAACTTTTTGGCTATCCCCTaGAACAAAGCCAATTGCATC +
Preference number: 4 (lower is better)
Translates to: KFGVNVSHAGVDNGTVRNFLAIP*NKANCI
Trigger: GATGCAATTGGCTTTGTTCCAGGGGATAGCCAAAAA...GTTTCGGACAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACTTTTTGGCTATCCCCTaGAACAAAGCCAATTGCATC +
Preference number: 4 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNFLAIP*NKANCI
Trigger: GATGCAATTGGCTTTGTTCCAGGGGATAGCCAAAAA...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp AGCATGTTGATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCACACCGCCACTGCTACTaGCAGCTCTCTTTCGCTGAG +
Preference number: 4 (lower is better)
Translates to: SMLIMSKFTTSNTFIALSHRHCY*QLSFAE
Trigger: CTCAGCGAAAGAGAGCTGGCAGTAGCAGTGGCGGTG...TGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATCAACATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR GCA 90 bp ACCTTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTATCAAACACCTTCATTaGTTTATCATCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: TFSNSRSTAIRRPNSMSGIKHLH*FIITHR
Trigger: TCTGTGGGTGATGATAAAGCAATGAAGGTGTTTGAT...ACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp CTTAGGGCACTCAACAGGAAAAAGTTTGGTGTGAATGTCTCCCATGCTGGTGTGCATTTCTATAGTAGTTaGAGCACGATGCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LRALNRKKFGVNVSHAGVHFYSS*STMLFG
Trigger: GCCAAAAAGCATCGTGCTGCAACTACTATAGAAATG...CACACCAGCATGGGAGACATTCACACCAAACTTTTTCCTGTTGAGTGCCCTAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACCGTCCAAATACTGTATaGTTATTATCAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNRPNTV*LLSSQG
Trigger: GCCTTGGCTTGATAATAAGCATACAGTATTTGGACG...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCTCCTCATCGTTCTCCTaGGACACCGCCACTGCTACT +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLSSSFS*DTATAT
Trigger: AGTAGCAGTGGCGGTGTCCCAGGAGAACGATGAGGA...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR CCA 90 bp TCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACATATATCCTCATCGTTCTCCTaGGACACCGCCACTGCTACT +
Preference number: 4 (lower is better)
Translates to: SIRICTFRIFWFSFGKHISSSFS*DTATAT
Trigger: AGTAGCAGTGGCGGTGTCCCAGGAGAACGATGAGGA...TATATGTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACATCAAGCCAAGGCGTTaGTACTACCGTTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNIKPRR*YYRYEK
Trigger: TTTTTCATAACGGTAGTACCAACGCCTTGGCTTGAT...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR CAA 72 bp AATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTaGAGTAGCTGCCATGACTTCTTCTTTAGAAGGTTT +
Preference number: 4 (lower is better)
Translates to: NGTVRNSFRSFS*SSCHDFFFRRF
Trigger: AAACCTTCTAAAGAAGAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CTGTACTCTTTTCGGAAGCAGCAACTGAAGAAATTGCATCCCCTGGGCAATAGAGTTGGATCTCCAGTCTaGATCATAAAGCCCTTAATT +
Preference number: 4 (lower is better)
Translates to: LYSFRKQQLKKLHPLGNRVGSPV*IIKPLI
Trigger: AATTAAGGGCTTTATGATTCAGACTGGAGATCCAAC...TCTATTGCCCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAAAAGAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp ATAGATCCACTCACACTGTCCAGGAAAATAGCCAAGTTTCAGCATGTTGATCATGCGCTCATACATGGATaGACTGGGGAGATTATCAAG +
Preference number: 4 (lower is better)
Translates to: IDPLTLSRKIAKFQHVDHALIHG*TGEIIK
Trigger: CTTGATAATCTCCCCAGTGCATCCATGTATGAGCGC...ATGATCAACATGCTGAAACTTGGCTATTTTCCTGGACAGTGTGAGTGGATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000515447.5
CDS-3UTR CCA 90 bp AAAATAGCCAAGTTTCAGCATGTTGATCATGTCAAAGTTCACTACATCAAACACTCCTCATCGTTCTCCTaGGACACCGCCACTGCTACT +
Preference number: 4 (lower is better)
Translates to: KIAKFQHVDHVKVHYIKHSSSFS*DTATAT
Trigger: AGTAGCAGTGGCGGTGTCCCAGGAGAACGATGAGGA...GTGTTTGATGTAGTGAACTTTGACATGATCAACATGCTGAAACTTGGCTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR CCA 90 bp ACTGGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCAGACTTTCCTCTTCTTaGCCAGTGTTGCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: TGSNNKICSQVHIARVAFRLSSS*PVLPPQ
Trigger: CTGTGGAGGCAACACTGGCCAAGAAGAGGAAAGTCT...GAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR CCA 90 bp CTATTTTCTTCCCATCTGGTGAAAAACATACGCTGGTTGGATAAGCCTTACACTCAGCACGATGCTTTTTaGCTATCCCCTGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: LFSSHLVKNIRWLDKPYTQHDAF*LSPGTK
Trigger: CTTTGTTCCAGGGGATAGCCAAAAAGCATCGTGCTG...AGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR CAA 72 bp GCTTTCATTTCTATAGTAGTTGCAGCACGATGCTTTTaGGCTATCCCCTGGAACAAAGCCAATTGCATCACT +
Preference number: 4 (lower is better)
Translates to: AFISIVVAARCF*AIPWNKANCIT
Trigger: AGTGATGCAATTGGCTTTGTTCCAGGGGATAGCCAAAAAGCATCGTGCTGCAACTACTATAGAAATGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp GAACTTGACATGTCCATCATGACTGGCAGTAATAATAAAATCTGTTTTGGTGCATTCGGAAGCAGCAACTaGAGAAATTGCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: ELDMSIMTGSNNKICFGAFGSSN*RNCIPW
Trigger: CCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAA...TGCACCAAAACAGATTTTATTATTACTGCCAGTCATGATGGACATGTCAAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR TCA 90 bp TGTATGCCCATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTTTCGGAAGCAGCAACTaGAGAAATTGCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: CMPIIITISAVNTEVFHCFGSSN*RNCIPW
Trigger: CCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAA...ACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAATGGGCATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CACATTTTTGGGGAATTTATATTCATGAGGAGGCCCAGTCCAGTATTCAATCATGGGTTTAGCCGTATCTaGGTAAGAGGTGATGTATGG +
Preference number: 4 (lower is better)
Translates to: HIFGEFIFMRRPSPVFNHGFSRI*VRGDVW
Trigger: CCATACATCACCTCTTACTCAGATACGGCTAAACCC...ATGATTGAATACTGGACTGGGCCTCCTCATGAATATAAATTCCCCAAAAATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp TTATTATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTATTAGGTCCTTCAGCTTaGGTAGCTGCCATGACTTCT +
Preference number: 4 (lower is better)
Translates to: LLSSQGVGTTVMKNWDPLLGPSA*VAAMTS
Trigger: AGAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAA...TAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGATAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp TCCAGGAAAATAGCCAAGTTTCAGCATGTTGATCATGTCAAAGTTCACTACATCGGAAAAAGTTTGGTGTaGATGTCTCCCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: SRKIAKFQHVDHVKVHYIGKSLV*MSPMLV
Trigger: CACCAGCATGGGAGACATTCACACCAAACTTTTTCC...GATGTAGTGAACTTTGACATGATCAACATGCTGAAACTTGGCTATTTTCCTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp ACTGGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCGCGCTCATACATGGATaGACTGGGGAGATTATCAAG +
Preference number: 4 (lower is better)
Translates to: TGSNNKICSQVHIARVAFALIHG*TGEIIK
Trigger: CTTGATAATCTCCCCAGTGCATCCATGTATGAGCGC...GAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR GCA 90 bp AAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTCACAGAACAGAACAATaGTCCCTCAGAGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: KNISIRICTFRIFWFSFGHRTEQ*SLRANC
Trigger: GCAGTTAGCTCTGAGGGAGCATTGTTCTGTTCTGTG...ACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp GTGAACACAGAAGTTTTCCACTGTCTTAGGGCACTCAACAGGAAAAAGTTTGGTATGTCTGGTAACTGTTaGCTCATCTGTTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: VNTEVFHCLRALNRKKFGMSGNC*LICCSS
Trigger: TGAACTGCAACAGATGAGGCAACAGTTACCAGACAT...ACCAAACTTTTTCCTGTTGAGTGCCCTAAGACAGTGGAAAACTTCTGTGTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp ATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATCACCCACAGTAGTTGCAGCACGATaGTTTTTGGCTATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: IMSKFTTSNTFIALSSPTVVAAR*FLAIPW
Trigger: CCAGGGGATAGCCAAAAAGCATCGTGCTGCAACTAC...TGTGGGTGATGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp TCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTGTAGTTGCAGCACGATaGTTTTTGGCTATCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SLKTSRSESALFVSSGSRVVAAR*FLAIPG
Trigger: ACCGGGGATAGCCAAAAAGCATCGTGCTGCAACTAC...ACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000514172.1
CDS-3UTR CCA 90 bp ATAGATCCACTCACACTGTCCAGGAAAATAGCCAAGTTTCAGCATGTTGATCATAACTGCGCTCATACATaGATGCACTGGGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: IDPLTLSRKIAKFQHVDHNCAHT*MHWGDY
Trigger: ATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTT...ATGATCAACATGCTGAAACTTGGCTATTTTCCTGGACAGTGTGAGTGGATCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000515447.5
CDS-3UTR CCA 90 bp ATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTCTTAGGGCAGTTCTTTCCTCTTCTTaGCCAGTGTTGCCTCCACAG +
Preference number: 4 (lower is better)
Translates to: IIITISAVNTEVFHCLRAVLSSS*PVLPPQ
Trigger: CTGTGGAGGCAACACTGGCCAAGAAGAGGAAAGAAC...TGCCCTAAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511908.5
CDS-3UTR TCA 90 bp CTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCTTCCTTCTACGTCTCTGCTaGAAATCGCTACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: LNNSQVTTKMFNKFNSLFLLRLC*KSLPLS
Trigger: GGAAAGTGGTAGCGATTTTCAGCAGAGACGTAGAAG...GAAGAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000515447.5
CDS-3UTR TCA 90 bp TGTATGCCCATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTGGGTTTAGCCGTATCTaGGTAAGAGGTGATGTATGG +
Preference number: 4 (lower is better)
Translates to: CMPIIITISAVNTEVFHCGFSRI*VRGDVW
Trigger: CCATACATCACCTCTTACTCAGATACGGCTAAACCC...ACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAATGGGCATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CTGGTGAAAAACATACGCTGGTTGGATAAGCCTTACACTTGGCAAATTCATATATTTCTTCCCATCTGGTaGAAAACATACGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LVKNIRWLDKPYTWQIHIFLPIW*KTYAGW
Trigger: CCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAA...TATATGAATTTGCCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp GATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATCACCCACCTCTATGCATGTAACTaGGCTCATACATGGATGCAC +
Preference number: 4 (lower is better)
Translates to: DHVKVHYIKHLHCFIITHLYACN*AHTWMH
Trigger: GTGCATCCATGTATGAGCGCAGTTACATGCATAGAG...GTGGGTGATGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000515447.5
CDS-3UTR GCA 90 bp GGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCAATCACAGAACAGAACAATaGTCCCTCAGAGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: GSNNKICSQVHIARVAFNHRTEQ*SLRANC
Trigger: GCAGTTAGCTCTGAGGGAGCATTGTTCTGTTCTGTG...ATTGAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR GCA 90 bp CTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCTTCCACAGAACAGAACAATaGTCCCTCAGAGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: LNNSQVTTKMFNKFNSLFHRTEQ*SLRANC
Trigger: GCAGTTAGCTCTGAGGGAGCATTGTTCTGTTCTGTG...GAAGAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000515447.5
CDS-3UTR GCA 90 bp ATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTAGTATTATGTCTGGTAACTGTTaGCTCATCTGTTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: IKPRRWYYRYEKLGSISIMSGNC*LICCSS
Trigger: TGAACTGCAACAGATGAGGCAACAGTTACCAGACAT...AATACTAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp CAGCATGTTGATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATTCTCCTCCCCATATaGTTTCTCCTCCCATACCAG +
Preference number: 4 (lower is better)
Translates to: QHVDHVKVHYIKHLHCFIILLPI*FLLPYQ
Trigger: CTGGTATGGGAGGAGAAAGCATATGGGGAGGAGAAT...GATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATCAACATGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp TTTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCCCAACTTCATGTGGCTaGTTTCCTCTTCTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: FLIKNISIRICTFRIFWFPTSCG*FPLLGQ
Trigger: CTGGCCAAGAAGAGGAAAGCAGCCACATGAAGTTGG...GAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR CCA 90 bp TTATTATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTAAGAAATTGCATCCCCTaGGCAATAGATCCACTCACA +
Preference number: 4 (lower is better)
Translates to: LLSSQGVGTTVMKNWDPLRNCIP*AIDPLT
Trigger: TGTGAGTGGATCTATTGCCCAGGGGATGCAATTTCT...TAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGATAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp AACATGCTTAGTGATTCATCAAAGACTCTCATGAGTTTTCCAGTTACAAATCTGTCTCCCATGCTGGTGTaGATAATGGCACTGTCCGAA +
Preference number: 4 (lower is better)
Translates to: NMLSDSSKTLMSFPVTNLSPMLV*IMALSE
Trigger: TTCGGACAGTGCCATTATCCACACCAGCATGGGAGA...CAGATTTGTAACTGGAAAACTCATGAGAGTCTTTGATGAATCACTAAGCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp CTATTTTCTTCCCATCTGGTGAAAAACATACGCTGGTTGGATAAGCCTTACACTCATACCAGTACCTGTTaGATCTCCAGTCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: LFSSHLVKNIRWLDKPYTHTSTC*ISSLNH
Trigger: ATGATTCAGACTGGAGATCCAACAGGTACTGGTATG...AGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp TTTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCCAGCACGATGCTTTTTaGCTATCCCCGGTTTGTCTC +
Preference number: 4 (lower is better)
Translates to: FLIKNISIRICTFRIFWFQHDAF*LSPVCL
Trigger: GAGACAAACCGGGGATAGCCAAAAAGCATCGTGCTG...GAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000514172.1
CDS-3UTR CCA 90 bp ATAGATCCACTCACACTGTCCAGGAAAATAGCCAAGTTTCAGCATGTTGATCATAATTCCAACTTCATGTaGCTGCTTTCCTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: IDPLTLSRKIAKFQHVDHNSNFM*LLSSSW
Trigger: CCAAGAAGAGGAAAGCAGCCACATGAAGTTGGAATT...ATGATCAACATGCTGAAACTTGGCTATTTTCCTGGACAGTGTGAGTGGATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR TCA 90 bp AAAATAGCCAAGTTTCAGCATGTTGATCATGTCAAAGTTCACTACATCAAACACCTTCTACGTCTCTGCTaGAAATCGCTACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: KIAKFQHVDHVKVHYIKHLLRLC*KSLPLS
Trigger: GGAAAGTGGTAGCGATTTTCAGCAGAGACGTAGAAG...GTGTTTGATGTAGTGAACTTTGACATGATCAACATGCTGAAACTTGGCTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR TCA 90 bp AGCATGTTGATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCACTTCTACGTCTCTGCTaGAAATCGCTACCACTTTCC +
Preference number: 4 (lower is better)
Translates to: SMLIMSKFTTSNTFIALSLLRLC*KSLPLS
Trigger: GGAAAGTGGTAGCGATTTTCAGCAGAGACGTAGAAG...TGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATCAACATGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR TCA 90 bp GAACTTGACATGTCCATCATGACTGGCAGTAATAATAAAATCTGTTTTGGTGCAGGGAATTTATATTCATaGGGAGGCCCAGTCCAGTAT +
Preference number: 4 (lower is better)
Translates to: ELDMSIMTGSNNKICFGAGNLYS*GGPVQY
Trigger: ATACTGGACTGGGCCTCCTCATGAATATAAATTCCC...TGCACCAAAACAGATTTTATTATTACTGCCAGTCATGATGGACATGTCAAGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR TCA 90 bp TCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACATATATTTCTTCCCATCTGGTaGAAAACATACGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SIRICTFRIFWFSFGKHIFLPIW*KTYAGW
Trigger: CCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAA...TATATGTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR TCA 90 bp AAAATAGCCAAGTTTCAGCATGTTGATCATGTCAAAGTTCACTACATCAAACACGGAAAAAGTTTGGTGTaGATGTCTCCCATGCTGGTG +
Preference number: 4 (lower is better)
Translates to: KIAKFQHVDHVKVHYIKHGKSLV*MSPMLV
Trigger: CACCAGCATGGGAGACATTCACACCAAACTTTTTCC...GTGTTTGATGTAGTGAACTTTGACATGATCAACATGCTGAAACTTGGCTATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CTATTTTCTTCCCATCTGGTGAAAAACATACGCTGGTTGGATAAGCCTTACACTGTTGGATCTCCAGTCTaGATCATAAAGCCCTTAATT +
Preference number: 4 (lower is better)
Translates to: LFSSHLVKNIRWLDKPYTVGSPV*IIKPLI
Trigger: AATTAAGGGCTTTATGATTCAGACTGGAGATCCAAC...AGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp AACATGCTTAGTGATTCATCAAAGACTCTCATGAGTTTTCCAGTTACAAATCTGGGATCCATTAGTATTTaGTCCCGCGTTAGCCATGCT +
Preference number: 4 (lower is better)
Translates to: NMLSDSSKTLMSFPVTNLGSISI*SRVSHA
Trigger: AGCATGGCTAACGCGGGATCAAATACTAATGGATCC...CAGATTTGTAACTGGAAAACTCATGAGAGTCTTTGATGAATCACTAAGCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp GGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCAATCTCTATGCATGTAACTaGGCTCATACATGGATGCAC +
Preference number: 4 (lower is better)
Translates to: GSNNKICSQVHIARVAFNLYACN*AHTWMH
Trigger: GTGCATCCATGTATGAGCGCAGTTACATGCATAGAG...ATTGAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR GCA 90 bp TCCAGGAAAATAGCCAAGTTTCAGCATGTTGATCATGTCAAAGTTCACTACATCTCCCTCAGAGCTAACTaGAATACTCTCAATAACTCC +
Preference number: 4 (lower is better)
Translates to: SRKIAKFQHVDHVKVHYISLRAN*NTLNNS
Trigger: GGAGTTATTGAGAGTATTGCAGTTAGCTCTGAGGGA...GATGTAGTGAACTTTGACATGATCAACATGCTGAAACTTGGCTATTTTCCTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR GCA 90 bp TCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTAGTATTTTGTTGCCTCATCTGTTaGAGTTCAGTAAACATGCTT +
Preference number: 4 (lower is better)
Translates to: SSQGVGTTVMKNWDPLVFCCLIC*SSVNML
Trigger: AAGCATGTTTACTGAACTGCAACAGATGAGGCAACA...AAATACTAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp ACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACTGTTGCCTCATCTGTTaGAGTTCAGTAAACATGCTT +
Preference number: 4 (lower is better)
Translates to: TSRSESALFVSSGSRLVNCCLIC*SSVNML
Trigger: AAGCATGTTTACTGAACTGCAACAGATGAGGCAACA...GTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR GCA 90 bp ATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTAGTATTATCTCGATCAGAATCTaGACTTTTCGTATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: IKPRRWYYRYEKLGSISIISIRI*TFRIFW
Trigger: CCAGAAGATACGAAAAGTGCAGATTCTGATCGAGAT...AATACTAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp ATTTTTGGGGAATTTATATTCATGAGGAGGCCCAGTCCAGTATTCAATCATCCCCATACATGGATGCACTaGGGAGATTATCAAGATAGA +
Preference number: 4 (lower is better)
Translates to: IFGEFIFMRRPSPVFNHPHTWMH*GDYQDR
Trigger: TCTATCTTGATAATCTCCCCAGTGCATCCATGTATG...GGGATGATTGAATACTGGACTGGGCCTCCTCATGAATATAAATTCCCCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR CCA 90 bp ATAGATCCACTCACACTGTCCAGGAAAATAGCCAAGTTTCAGCATGTTGATCATCATACATGGATGCACTaGGGAGATTATCAAGATAGA +
Preference number: 4 (lower is better)
Translates to: IDPLTLSRKIAKFQHVDHHTWMH*GDYQDR
Trigger: TCTATCTTGATAATCTCCCCAGTGCATCCATGTATG...ATGATCAACATGCTGAAACTTGGCTATTTTCCTGGACAGTGTGAGTGGATCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000515447.5
CDS-3UTR CCA 90 bp CTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCTTCAACTGCGCTCATACATaGATGCACTGGGGAGATTAT +
Preference number: 4 (lower is better)
Translates to: LNNSQVTTKMFNKFNSLFNCAHT*MHWGDY
Trigger: ATAATCTCCCCAGTGCATCCATGTATGAGCGCAGTT...GAAGAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000515447.5
CDS-3UTR CCA 90 bp ATTTTTGGGGAATTTATATTCATGAGGAGGCCCAGTCCAGTATTCAATCATCCCGTGAAAAACATACGCTaGTTGGATAAGCCTTACACT +
Preference number: 4 (lower is better)
Translates to: IFGEFIFMRRPSPVFNHPVKNIR*LDKPYT
Trigger: AGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCAC...GGGATGATTGAATACTGGACTGGGCCTCCTCATGAATATAAATTCCCCAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp ATAGATCCACTCACACTGTCCAGGAAAATAGCCAAGTTTCAGCATGTTGATCATTATCTGAGTAAGAGGTaGTGTATGGAGTTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: IDPLTLSRKIAKFQHVDHYLSKR*CMEFVK
Trigger: TTTGACAAACTCCATACATCACCTCTTACTCAGATA...ATGATCAACATGCTGAAACTTGGCTATTTTCCTGGACAGTGTGAGTGGATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp TTTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTTTCTTCCCATCTGGTaGAAAACATACGCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: FLIKNISIRICTFRIFWFFLPIW*KTYAGW
Trigger: CCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAA...GAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR GCA 90 bp AGCATGTTGATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCACTCTATGCATGTAACTaGGCTCATACATGGATGCAC +
Preference number: 4 (lower is better)
Translates to: SMLIMSKFTTSNTFIALSLYACN*AHTWMH
Trigger: GTGCATCCATGTATGAGCGCAGTTACATGCATAGAG...TGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATCAACATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000515447.5
CDS-3UTR GCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCTCCCTCAGAGCTAACTaGAATACTCTCAATAACTCC +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLSLRAN*NTLNNS
Trigger: GGAGTTATTGAGAGTATTGCAGTTAGCTCTGAGGGA...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR GCA 90 bp ATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTCTTAGGGCATCCCTCAGAGCTAACTaGAATACTCTCAATAACTCC +
Preference number: 4 (lower is better)
Translates to: IIITISAVNTEVFHCLRASLRAN*NTLNNS
Trigger: GGAGTTATTGAGAGTATTGCAGTTAGCTCTGAGGGA...TGCCCTAAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp ATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATCACCCACATCCCTCAGAGCTAACTaGAATACTCTCAATAACTCC +
Preference number: 4 (lower is better)
Translates to: IMSKFTTSNTFIALSSPTSLRAN*NTLNNS
Trigger: GGAGTTATTGAGAGTATTGCAGTTAGCTCTGAGGGA...TGTGGGTGATGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR GCA 90 bp TTATTATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTACATTTCTATAGTAGTTaGAGCACGATGCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: LLSSQGVGTTVMKNWDPLHFYSS*STMLFG
Trigger: GCCAAAAAGCATCGTGCTGCAACTACTATAGAAATG...TAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGATAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp AAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTCATTTCTATAGTAGTTaGAGCACGATGCTTTTTGGC +
Preference number: 4 (lower is better)
Translates to: KNISIRICTFRIFWFSFGHFYSS*STMLFG
Trigger: GCCAAAAAGCATCGTGCTGCAACTACTATAGAAATG...ACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR GCA 90 bp CTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGATCTCGATCAGAATCTaGACTTTTCGTATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: LIKNISIRICTFRIFWFSISIRI*TFRIFW
Trigger: CCAGAAGATACGAAAAGTGCAGATTCTGATCGAGAT...CGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CCA 90 bp GGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCAATTTGGTGCATACCACATaGGTGATAACATCTCTATGC +
Preference number: 4 (lower is better)
Translates to: GSNNKICSQVHIARVAFNLVHTT*VITSLC
Trigger: GCATAGAGATGTTATCACCCATGTGGTATGCACCAA...ATTGAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR CCA 90 bp CTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTATTGGTGCATACCACATaGGTGATAACATCTCTATGC +
Preference number: 4 (lower is better)
Translates to: LCTTSIPLVTRPNTVCLLLVHTT*VITSLC
Trigger: GCATAGAGATGTTATCACCCATGTGGTATGCACCAA...TAATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR CCA 90 bp ATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATCACCCACATTGGTGCATACCACATaGGTGATAACATCTCTATGC +
Preference number: 4 (lower is better)
Translates to: IMSKFTTSNTFIALSSPTLVHTT*VITSLC
Trigger: GCATAGAGATGTTATCACCCATGTGGTATGCACCAA...TGTGGGTGATGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000515447.5
CDS-3UTR CCA 90 bp AACATGCTTAGTGATTCATCAAAGACTCTCATGAGTTTTCCAGTTACAAATCTGGTCAAAAATATGAAGTaGCTGGTTATCTCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NMLSDSSKTLMSFPVTNLVKNMK*LVISSA
Trigger: GGCCGAGGAGATAACCAGCCACTTCATATTTTTGAC...CAGATTTGTAACTGGAAAACTCATGAGAGTCTTTGATGAATCACTAAGCATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp TGTATGCCCATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTAAAACATACGCTGGTTaGATAAGCCTTACACTTGGC +
Preference number: 4 (lower is better)
Translates to: CMPIIITISAVNTEVFHCKTYAG*ISLTLG
Trigger: GCCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTT...ACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAATGGGCATACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCCATACCAGTACCTGTTaGATCTCCAGTCTGAATCAT +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLHTSTC*ISSLNH
Trigger: ATGATTCAGACTGGAGATCCAACAGGTACTGGTATG...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
3UTR CAA 72 bp AACAAAGCCAATTGCATCACTCTAATATTTTCTTGTTaGCCTAAAATCCGCACACACCGGTTTGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: NKANCITLIFSC*PKIRTHRFVST
Trigger: TGTAGAGACAAACCGGTGTGTGCGGATTTTAGGCAAACAAGAAAATATTAGAGTGATGCAATTGGCTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGCTCGGCCATCATAAATaGAAATTTTTCCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: LIKNISIRICTFRIFWFSLGHHK*KFFLYS
Trigger: AGAGTACAGGAAAAATTTTCATTTATGATGGCCGAG...CGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp CCTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTCTCGGCCATCATAAATaGAAATTTTTCCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: PLYNFHSFSHSSKYCMLILGHHK*KFFLYS
Trigger: AGAGTACAGGAAAAATTTTCATTTATGATGGCCGAG...AATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp TCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACATATATGTTGCCTCATCTGTTaGAGTTCAGTAAACATGCTT +
Preference number: 4 (lower is better)
Translates to: SIRICTFRIFWFSFGKHICCLIC*SSVNML
Trigger: AAGCATGTTTACTGAACTGCAACAGATGAGGCAACA...TATATGTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR GCA 90 bp TTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTATGTCTGGTAACTGTTaGCTCATCTGTTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FSLKTSRSESALFVSSGSMSGNC*LICCSS
Trigger: TGAACTGCAACAGATGAGGCAACAGTTACCAGACAT...AGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR GCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCATCTCGATCAGAATCTaGACTTTTCGTATCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLISIRI*TFRIFW
Trigger: CCAGAAGATACGAAAAGTGCAGATTCTGATCGAGAT...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp CTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCTTCCGTCCAAATACTGTATaGTTATTATCAAGCCAAGGC +
Preference number: 4 (lower is better)
Translates to: LNNSQVTTKMFNKFNSLFRPNTV*LLSSQG
Trigger: GCCTTGGCTTGATAATAAGCATACAGTATTTGGACG...GAAGAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR CCA 90 bp GGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCAATCATACATGGATGCACTaGGGAGATTATCAAGATAGA +
Preference number: 4 (lower is better)
Translates to: GSNNKICSQVHIARVAFNHTWMH*GDYQDR
Trigger: TCTATCTTGATAATCTCCCCAGTGCATCCATGTATG...ATTGAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR CCA 90 bp TTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTAAAACATACGCTGGTTaGATAAGCCTTACACTTGGC +
Preference number: 4 (lower is better)
Translates to: FSLKTSRSESALFVSSGSKTYAG*ISLTLG
Trigger: GCCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTT...AGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CCA 90 bp CTGGTGAAAAACATACGCTGGTTGGATAAGCCTTACACTTGGCAAATTCATATATGTACAGACTATTGTTaGGTCAGCTTGAATATTCTG +
Preference number: 4 (lower is better)
Translates to: LVKNIRWLDKPYTWQIHICTDYC*VSLNIL
Trigger: CAGAATATTCAAGCTGACCCAACAATAGTCTGTACA...TATATGAATTTGCCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCATCAAGCCAAGGCGTTaGTACTACCGTTATGAAAAA +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLIKPRR*YYRYEK
Trigger: TTTTTCATAACGGTAGTACCAACGCCTTGGCTTGAT...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR TCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCCAAGTTTCAGCATGTTaGTCATGTCAAAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLQVSAC*SCQSSL
Trigger: TAGTGAACTTTGACATGATCAACATGCTGAAACTTG...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR TCA 90 bp CTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTATATCTGAGTAAGAGGTaGTGTATGGAGTTTGTCAAA +
Preference number: 4 (lower is better)
Translates to: LCTTSIPLVTRPNTVCLLYLSKR*CMEFVK
Trigger: TTTGACAAACTCCATACATCACCTCTTACTCAGATA...TAATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR GCA 90 bp CTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCTTCATCAAACACCTTCATTaGTTTATCATCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: LNNSQVTTKMFNKFNSLFIKHLH*FIITHR
Trigger: TCTGTGGGTGATGATAAAGCAATGAAGGTGTTTGAT...GAAGAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000515447.5
CDS-3UTR GCA 90 bp TGGATGCACTGGGGAGATTATCAAGATAGACTCTTTCAAACTCTAAGACTAAATATCAAACACCTTCATTaGTTTATCATCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: WMHWGDYQDRLFQTLRLNIKHLH*FIITHR
Trigger: TCTGTGGGTGATGATAAAGCAATGAAGGTGTTTGAT...ATTTAGTCTTAGAGTTTGAAAGAGTCTATCTTGATAATCTCCCCAGTGCATCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR GCA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCATCAAACACCTTCATTaGTTTATCATCACCCACAGA +
Preference number: 4 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLIKHLH*FIITHR
Trigger: TCTGTGGGTGATGATAAAGCAATGAAGGTGTTTGAT...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000503435.5
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR CCA 90 bp TTTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCGTGAAAAACATACGCTaGTTGGATAAGCCTTACACT +
Preference number: 4 (lower is better)
Translates to: FLIKNISIRICTFRIFWFVKNIR*LDKPYT
Trigger: AGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCAC...GAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CCA 90 bp CAGCATGTTGATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCTGTACAGACTATTGTTaGGTCAGCTTGAATATTCTG +
Preference number: 4 (lower is better)
Translates to: QHVDHVKVHYIKHLHCFICTDYC*VSLNIL
Trigger: CAGAATATTCAAGCTGACCCAACAATAGTCTGTACA...GATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATCAACATGCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CCA 90 bp TCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTGTACAGACTATTGTTaGGTCAGCTTGAATATTCTG +
Preference number: 4 (lower is better)
Translates to: SLKTSRSESALFVSSGSRCTDYC*VSLNIL
Trigger: CAGAATATTCAAGCTGACCCAACAATAGTCTGTACA...ACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
3UTR CAA 72 bp CTATTTTCTTCCCATCTGGTGAAAAACATACGCTGGTaGGATAAGCCTTACACTTGGCAAATTCATATAAAT +
Preference number: 4 (lower is better)
Translates to: LFSSHLVKNIRW*DKPYTWQIHIN
Trigger: ATTTATATGAATTTGCCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAGATGGGAAGAAAATAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS CCA 90 bp GGTAAAGGTCCAACCCAGCGCTCTTCGTTCTCCTCATCGTTCTCCTaGGACACCGCCACTGCTACTGCCAGCTCTCTTTCGCTGAGTTCT +
Preference number: 5 (lower is better)
Translates to: GKGPTQRSSFSSSFS*DTATATASSLSLSS
Trigger: AGAACTCAGCGAAAGAGAGCTGGCAGTAGCAGTGGCGGTGTCCCAGGAGAACGATGAGGAGAACGAAGAGCGCTGGGTTGGACCTTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261308.10
ENST00000503435.5
ENST00000508982.1
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
ENST00000535264.5
ENST00000538977.5
CDS-3UTR CAA 90 bp ACCTTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTCATCAAACACCTTCATaGCTTTATCATCACCCACAG +
Preference number: 5 (lower is better)
Translates to: TFSNSRSTAIRRPNSMSGHQTPS*LYHHPQ
Trigger: CTGTGGGTGATGATAAAGCAATGAAGGTGTTTGATG...ACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp CTGTACTCTTTTCGGAAGCAGCAACTGAAGAAATTGCATCCCCTGGGCAATAGACAGCAACTGAAGAAATaGCATCCCCTGGGCAATAGA +
Preference number: 5 (lower is better)
Translates to: LYSFRKQQLKKLHPLGNRQQLKK*HPLGNR
Trigger: TCTATTGCCCAGGGGATGCAATTTCTTCAGTTGCTG...TCTATTGCCCAGGGGATGCAATTTCTTCAGTTGCTGCTTCCGAAAAGAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp GGTGTGGATAATGGCACTGTCCGAAACTCGTTTAGGTCCTTCAGCTTGAGTAGCAAAAACATACGCTGGTaGGATAAGCCTTACACTTGG +
Preference number: 5 (lower is better)
Translates to: GVDNGTVRNSFRSFSLSSKNIRW*DKPYTW
Trigger: CCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTTT...GCTACTCAAGCTGAAGGACCTAAACGAGTTTCGGACAGTGCCATTATCCACACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACGGATTGACTTTGACGTaGGAGATCCTCTGTACAACT +
Preference number: 5 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNGLTLT*EILCTT
Trigger: AGTTGTACAGAGGATCTCCAACGTCAAAGTCAATCC...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp GTGAACACAGAAGTTTTCCACTGTCTTAGGGCACTCAACAGGAAAAAGTTTGGTGCAGCACGATGCTTTTaGGCTATCCCCTGGAACAAA +
Preference number: 5 (lower is better)
Translates to: VNTEVFHCLRALNRKKFGAARCF*AIPWNK
Trigger: TTTGTTCCAGGGGATAGCCAAAAAGCATCGTGCTGC...ACCAAACTTTTTCCTGTTGAGTGCCCTAAGACAGTGGAAAACTTCTGTGTTCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp ACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACGCAGCACGATGCTTTTaGGCTATCCCCGGTTTGTCT +
Preference number: 5 (lower is better)
Translates to: TSRSESALFVSSGSRLVNAARCF*AIPGLS
Trigger: AGACAAACCGGGGATAGCCAAAAAGCATCGTGCTGC...GTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514172.1
CDS-3UTR CAA 90 bp ACTGGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCTCTTCTTGGCCAGTGTaGCCTCCACAGGTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: TGSNNKICSQVHIARVAFSSWPV*PPQVKV
Trigger: GACCTTTACCTGTGGAGGCAACACTGGCCAAGAAGA...GAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR CAA 90 bp CTGGTGAAAAACATACGCTGGTTGGATAAGCCTTACACTTGGCAAATTCATATATCTTCTTGGCCAGTGTaGCCTCCACAGGTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: LVKNIRWLDKPYTWQIHISSWPV*PPQVKV
Trigger: GACCTTTACCTGTGGAGGCAACACTGGCCAAGAAGA...TATATGAATTTGCCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTTTCACCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp GATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATCACCCACTCTTCTTGGCCAGTGTaGCCTCCACAGGTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: DHVKVHYIKHLHCFIITHSSWPV*PPQVKV
Trigger: GACCTTTACCTGTGGAGGCAACACTGGCCAAGAAGA...GTGGGTGATGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR CAA 90 bp GATGCTGACATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGAGTTTTGGGATTGACTTaGACGTTGGAGATCCTCTGT +
Preference number: 5 (lower is better)
Translates to: DADILIGLICFGIDFDVGVLGLT*TLEILC
Trigger: ACAGAGGATCTCCAACGTCAAAGTCAATCCCAAAAC...TCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGATGTCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp ATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATCACCCACATCTTCTTGGCCAGTGTaGCCTCCACAGGTAAAGGTC +
Preference number: 5 (lower is better)
Translates to: IMSKFTTSNTFIALSSPTSSWPV*PPQVKV
Trigger: GACCTTTACCTGTGGAGGCAACACTGGCCAAGAAGA...TGTGGGTGATGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR CAA 90 bp TTCTCCAACTCACGTTCTACAGCCATTCGTCGGCCAAATTCCATGTCTGGTAACATGATGTACAGACTATaGTTGGGTCAGCTTGAATAT +
Preference number: 5 (lower is better)
Translates to: FSNSRSTAIRRPNSMSGNMMYRL*LGQLEY
Trigger: ATATTCAAGCTGACCCAACAATAGTCTGTACATCAT...GTTACCAGACATGGAATTTGGCCGACGAATGGCTGTAGAACGTGAGTTGGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp ATCAAGCCAAGGCGTTGGTACTACCGTTATGAAAAACTGGGATCCATTAGTATTTTTAGGTCCTTCAGCTaGAGTAGCTGCCATGACTTC +
Preference number: 5 (lower is better)
Translates to: IKPRRWYYRYEKLGSISIFRSFS*SSCHDF
Trigger: GAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAAA...AATACTAATGGATCCCAGTTTTTCATAACGGTAGTACCAACGCCTTGGCTTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp ACTCTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCAAGACTTTCCTCTTCTaGGCCAGTGTTGCCTCCACA +
Preference number: 5 (lower is better)
Translates to: TLNNSQVTTKMFNKFNSLKTFLF*ASVAST
Trigger: TGTGGAGGCAACACTGGCCAAGAAGAGGAAAGTCTT...GAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503435.5
ENST00000515447.5
CDS-3UTR CAA 90 bp ACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACCTGTTGCCTCATCTGTaGCAGTTCAGTAAACATGCT +
Preference number: 5 (lower is better)
Translates to: TSRSESALFVSSGSRLVNLLPHL*QFSKHA
Trigger: AGCATGTTTACTGAACTGCAACAGATGAGGCAACAG...GTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CAA 90 bp ATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTCTTAGGGCAGCAGCACGATGCTTTTaGGCTATCCCCTGGAACAAA +
Preference number: 5 (lower is better)
Translates to: IIITISAVNTEVFHCLRAAARCF*AIPWNK
Trigger: TTTGTTCCAGGGGATAGCCAAAAAGCATCGTGCTGC...TGCCCTAAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp CACATTTTTGGGGAATTTATATTCATGAGGAGGCCCAGTCCAGTATTCAATCATCTGTTGCCTCATCTGTaGCAGTTCAGTAAACATGCT +
Preference number: 5 (lower is better)
Translates to: HIFGEFIFMRRPSPVFNHLLPHL*QFSKHA
Trigger: AGCATGTTTACTGAACTGCAACAGATGAGGCAACAG...ATGATTGAATACTGGACTGGGCCTCCTCATGAATATAAATTCCCCAAAAATGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp GATGCTGACATCCTCATAGGGCTTATCTGTTTTGGGATTGACTTTGACGTTGGACTAATATTTTCTTGTTaGCCTAAAATCCGCACACAC +
Preference number: 5 (lower is better)
Translates to: DADILIGLICFGIDFDVGLIFSC*PKIRTH
Trigger: GTGTGTGCGGATTTTAGGCAAACAAGAAAATATTAG...TCCAACGTCAAAGTCAATCCCAAAACAGATAAGCCCTATGAGGATGTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp CTCTGTACAACTTCCATTCCTTTAGTCACTCGTCCAAATACTGTATGCTTATTATTTAGGTCCTTCAGCTaGAGTAGCTGCCATGACTTC +
Preference number: 5 (lower is better)
Translates to: LCTTSIPLVTRPNTVCLLFRSFS*SSCHDF
Trigger: GAAGTCATGGCAGCTACTCAAGCTGAAGGACCTAAA...TAATAAGCATACAGTATTTGGACGAGTGACTAAAGGAATGGAAGTTGTACAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp AAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTGGATTGACTTTGACGTaGGAGATCCTCTGTACAACT +
Preference number: 5 (lower is better)
Translates to: KNISIRICTFRIFWFSFGGLTLT*EILCTT
Trigger: AGTTGTACAGAGGATCTCCAACGTCAAAGTCAATCC...ACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp ACTGGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCATTACCTTCCATTGTTaGGTGCATACCACATGGGTG +
Preference number: 5 (lower is better)
Translates to: TGSNNKICSQVHIARVAFITFHC*VHTTWV
Trigger: CACCCATGTGGTATGCACCAAACAATGGAAGGTAAT...GAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR CAA 90 bp AAAATAGCCAAGTTTCAGCATGTTGATCATGTCAAAGTTCACTACATCAAACACCAGCAACTGAAGAAATaGCATCCCCTGGGCAATAGA +
Preference number: 5 (lower is better)
Translates to: KIAKFQHVDHVKVHYIKHQQLKK*HPLGNR
Trigger: TCTATTGCCCAGGGGATGCAATTTCTTCAGTTGCTG...GTGTTTGATGTAGTGAACTTTGACATGATCAACATGCTGAAACTTGGCTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp AAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTTCAATCATCCCAGATTaGTCAGAAGACACTACTGCT +
Preference number: 5 (lower is better)
Translates to: KNISIRICTFRIFWFSFGSIIPD*SEDTTA
Trigger: AGCAGTAGTGTCTTCTGACAAATCTGGGATGATTGA...ACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp CTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGAAAAACATACGCTGGTaGGATAAGCCTTACACTTGG +
Preference number: 5 (lower is better)
Translates to: LIKNISIRICTFRIFWFSKNIRW*DKPYTW
Trigger: CCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTTT...CGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CAA 90 bp ATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTCTTAGGGCACTGTTGCCTCATCTGTaGCAGTTCAGTAAACATGCT +
Preference number: 5 (lower is better)
Translates to: IIITISAVNTEVFHCLRALLPHL*QFSKHA
Trigger: AGCATGTTTACTGAACTGCAACAGATGAGGCAACAG...TGCCCTAAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp GGCAGTAATAATAAAATCTGTTCTCAGGTCCATATAGCTAGAGTGGCTTTCAATCATCAAACACCTTCATaGCTTTATCATCACCCACAG +
Preference number: 5 (lower is better)
Translates to: GSNNKICSQVHIARVAFNHQTPS*LYHHPQ
Trigger: CTGTGGGTGATGATAAAGCAATGAAGGTGTTTGATG...ATTGAAAGCCACTCTAGCTATATGGACCTGAGAACAGATTTTATTATTACTGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503435.5
CDS-3UTR CAA 90 bp ATAGATCCACTCACACTGTCCAGGAAAATAGCCAAGTTTCAGCATGTTGATCATCTAATATTTTCTTGTTaGCCTAAAATCCGCACACAC +
Preference number: 5 (lower is better)
Translates to: IDPLTLSRKIAKFQHVDHLIFSC*PKIRTH
Trigger: GTGTGTGCGGATTTTAGGCAAACAAGAAAATATTAG...ATGATCAACATGCTGAAACTTGGCTATTTTCCTGGACAGTGTGAGTGGATCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp AACATGCTTAGTGATTCATCAAAGACTCTCATGAGTTTTCCAGTTACAAATCTGGTTTTGGGATTGACTTaGACGTTGGAGATCCTCTGT +
Preference number: 5 (lower is better)
Translates to: NMLSDSSKTLMSFPVTNLVLGLT*TLEILC
Trigger: ACAGAGGATCTCCAACGTCAAAGTCAATCCCAAAAC...CAGATTTGTAACTGGAAAACTCATGAGAGTCTTTGATGAATCACTAAGCATGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp GATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATCACCCACATAATAAAATCTGTTTaGGTGCATACCACATGGGTG +
Preference number: 5 (lower is better)
Translates to: DHVKVHYIKHLHCFIITHIIKSV*VHTTWV
Trigger: CACCCATGTGGTATGCACCAAAACAGATTTTATTAT...GTGGGTGATGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR CAA 90 bp AACATGCTTAGTGATTCATCAAAGACTCTCATGAGTTTTCCAGTTACAAATCTGCATCAAACACCTTCATaGCTTTATCATCACCCACAG +
Preference number: 5 (lower is better)
Translates to: NMLSDSSKTLMSFPVTNLHQTPS*LYHHPQ
Trigger: CTGTGGGTGATGATAAAGCAATGAAGGTGTTTGATG...CAGATTTGTAACTGGAAAACTCATGAGAGTCTTTGATGAATCACTAAGCATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp TTTCAGCATGTTGATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTCATCAAACACCTTCATaGCTTTATCATCACCCACAG +
Preference number: 5 (lower is better)
Translates to: FQHVDHVKVHYIKHLHCFHQTPS*LYHHPQ
Trigger: CTGTGGGTGATGATAAAGCAATGAAGGTGTTTGATG...AAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGATCAACATGCTGAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
CDS-3UTR CAA 90 bp TTTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCAATCATCCCAGATTaGTCAGAAGACACTACTGCT +
Preference number: 5 (lower is better)
Translates to: FLIKNISIRICTFRIFWFSIIPD*SEDTTA
Trigger: AGCAGTAGTGTCTTCTGACAAATCTGGGATGATTGA...GAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp TTTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCAAAAACATACGCTGGTaGGATAAGCCTTACACTTGG +
Preference number: 5 (lower is better)
Translates to: FLIKNISIRICTFRIFWFKNIRW*DKPYTW
Trigger: CCAAGTGTAAGGCTTATCCAACCAGCGTATGTTTTT...GAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CAA 90 bp CTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGATGATGTACAGACTATaGTTGGGTCAGCTTGAATAT +
Preference number: 5 (lower is better)
Translates to: LIKNISIRICTFRIFWFSMMYRL*LGQLEY
Trigger: ATATTCAAGCTGACCCAACAATAGTCTGTACATCAT...CGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CAA 90 bp TCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTATCTGTTTTGGGATaGACTTTGACGTTGGAGATC +
Preference number: 5 (lower is better)
Translates to: SLKTSRSESALFVSSGSRLSVLG*TLTLEI
Trigger: GATCTCCAACGTCAAAGTCAATCCCAAAACAGATAA...ACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS GCA 90 bp TTCTTCTTTAGAAGGTTTCTCATTAAAAACATCTCGATCAGAATCTaGACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACTCAAGGAG +
Preference number: 5 (lower is better)
Translates to: FFFRRFLIKNISIRI*TFRIFWFSFGKLKE
Trigger: CTCCTTGAGTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAAACCTTCTAAAGAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513773.1
CDS-3UTR CAA 90 bp ATGCCCATTATAATAACCATTTCTGCTGTGAACACAGAAGTTTTCCACTGTCTTCTGGAACAAAGCCAATaGCATCACTCTAATATTTTC +
Preference number: 5 (lower is better)
Translates to: MPIIITISAVNTEVFHCLLEQSQ*HHSNIF
Trigger: GAAAATATTAGAGTGATGCAATTGGCTTTGTTCCAG...AAGACAGTGGAAAACTTCTGTGTTCACAGCAGAAATGGTTATTATAATGGGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp ATCATGTCAAAGTTCACTACATCAAACACCTTCATTGCTTTATCATCACCCACACTGGAACAAAGCCAATaGCATCACTCTAATATTTTC +
Preference number: 5 (lower is better)
Translates to: IMSKFTTSNTFIALSSPTLEQSQ*HHSNIF
Trigger: GAAAATATTAGAGTGATGCAATTGGCTTTGTTCCAG...TGTGGGTGATGATAAAGCAATGAAGGTGTTTGATGTAGTGAACTTTGACATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510930.5
ENST00000511908.5
CDS-3UTR CAA 90 bp CTCAATAACTCCCAGGTGACTACGAAAATGTTTAACAAATTCAATTCCCTCTTCATGTACAGACTATTGTaGGGTCAGCTTGAATATTCT +
Preference number: 5 (lower is better)
Translates to: LNNSQVTTKMFNKFNSLFMYRLL*GQLEYS
Trigger: AGAATATTCAAGCTGACCCAACAATAGTCTGTACAT...GAAGAGGGAATTGAATTTGTTAAACATTTTCGTAGTCACCTGGGAGTTATTGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510930.5
CDS-3UTR CAA 90 bp TCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACATATAATGTACAGACTATTGTaGGGTCAGCTTGAATATTCT +
Preference number: 5 (lower is better)
Translates to: SIRICTFRIFWFSFGKHIMYRLL*GQLEYS
Trigger: AGAATATTCAAGCTGACCCAACAATAGTCTGTACAT...TATATGTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CAA 90 bp TCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTCGTTTGGTAAACATATAATGATGTACAGACTATaGTTGGGTCAGCTTGAATAT +
Preference number: 5 (lower is better)
Translates to: SIRICTFRIFWFSFGKHIMMYRL*LGQLEY
Trigger: ATATTCAAGCTGACCCAACAATAGTCTGTACATCAT...TATATGTTTACCAAACGAGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS-3UTR CAA 90 bp TTCTCATTAAAAACATCTCGATCAGAATCTGCACTTTTCGTATCTTCTGGTTCTATGTACAGACTATTGTaGGGTCAGCTTGAATATTCT +
Preference number: 5 (lower is better)
Translates to: FSLKTSRSESALFVSSGSMYRLL*GQLEYS
Trigger: AGAATATTCAAGCTGACCCAACAATAGTCTGTACAT...AGAACCAGAAGATACGAAAAGTGCAGATTCTGATCGAGATGTTTTTAATGAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000510930.5
ENST00000511908.5
ENST00000514172.1
CDS TCA 72 bp GGTTCCTCCGGGTCCCGGCGCCTTCTACGTCTCTGCTaGAAATCGCTACCACTTTCCGCCGCCATGTTGTTC +
Preference number: 6 (lower is better)
Translates to: GSSGSRRLLRLC*KSLPLSAAMLF
Trigger: GAACAACATGGCGGCGGAAAGTGGTAGCGATTTTCAGCAGAGACGTAGAAGGCGCCGGGACCCGGAGGAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261308.10
ENST00000503435.5
ENST00000508982.1
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
ENST00000535264.5
ENST00000538977.5
CDS CCA 72 bp CCAACCCAGCGCTCTTCGTTCTCCTCATCGTTCTCCTaGGACACCGCCACTGCTACTGCCAGCTCTCTTTCG +
Preference number: 6 (lower is better)
Translates to: PTQRSSFSSSFS*DTATATASSLS
Trigger: CGAAAGAGAGCTGGCAGTAGCAGTGGCGGTGTCCCAGGAGAACGATGAGGAGAACGAAGAGCGCTGGGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261308.10
ENST00000503435.5
ENST00000508982.1
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
ENST00000535264.5
ENST00000538977.5
CDS GCA 72 bp TTCGTTCTCCTCATCGTTCTCCTGGGACACCGCCACTaGTACTGCCAGCTCTCTTTCGCTGAGTTCTGTTTT +
Preference number: 6 (lower is better)
Translates to: FVLLIVLLGHRH*YCQLSFAEFCF
Trigger: AAAACAGAACTCAGCGAAAGAGAGCTGGCAGTAGCAGTGGCGGTGTCCCAGGAGAACGATGAGGAGAACGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000261308.10
ENST00000503435.5
ENST00000508982.1
ENST00000510930.5
ENST00000511908.5
ENST00000515447.5
ENST00000535264.5
ENST00000538977.5
CDS TCA 72 bp AGTTGTTATACATACTCAACAGGAAAAAGTTTGGTGTaGATGTCTCCCATGCTGGTGTGGATAATGGCACTG +
Preference number: 6 (lower is better)
Translates to: SCYTYSTGKSLV*MSPMLVWIMAL
Trigger: CAGTGCCATTATCCACACCAGCATGGGAGACATTCACACCAAACTTTTTCCTGTTGAGTATGTATAACAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000511334.1
CDS CAA 72 bp TTCTACACGAACCTACTCATCTGTTTTGAAGGTCCTTaGCTATTCCTAGGGTATGTTAGCCCACATTTTCTC +
Preference number: 6 (lower is better)
Translates to: FYTNLLICFEGP*LFLGYVSPHFL
Trigger: GAGAAAATGTGGGCTAACATACCCTAGGAATAGCAAAGGACCTTCAAAACAGATGAGTAGGTTCGTGTAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508982.1
CDS GCA 72 bp AGAATAATTGTTTCATTTGTGGTAGCTCTCGACTTATaGCTTCTAGTAAGGCCTAACATGCCACCTGTTTGT +
Preference number: 6 (lower is better)
Translates to: RIIVSFVVALDL*LLVRPNMPPVC
Trigger: ACAAACAGGTGGCATGTTAGGCCTTACTAGAAGGCATAAGTCGAGAGCTACCACAAATGAAACAATTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513773.1
CDS GCA 72 bp TCAGAAGCTTTCATTTCTATAGTAGTTGCAGCACGATaGTTTTTGGCTATCCCCGGTTTGTCTCTACATTTA +
Preference number: 6 (lower is better)
Translates to: SEAFISIVVAAR*FLAIPGLSLHL
Trigger: TAAATGTAGAGACAAACCGGGGATAGCCAAAAAGCATCGTGCTGCAACTACTATAGAAATGAAAGCTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514172.1
CDS CAA 90 bp CAATCTACCACACCACAAAACCTATATTCTCTGTATTACCTTCCATaGTTTGGTGCATACCACATGGGTGATAACATCTCTATGCATGTA +
Preference number: 6 (lower is better)
Translates to: QSTTPQNLYSLYYLP*FGAYHMGDNISMHV
Trigger: TACATGCATAGAGATGTTATCACCCATGTGGTATGCACCAAACAATGGAAGGTAATACAGAGAATATAGGTTTTGTGGTGTGGTAGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000502703.5
ENST00000503435.5