RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP6R2 (Homo sapiens)

Ensembl gene IDs: ENSG00000100239

Ensembl transcript IDs: ENST00000216061.9, ENST00000359139.7, ENST00000395741.7, ENST00000395744.7, ENST00000401672.7, ENST00000427222.2, ENST00000470046.1, ENST00000612753.5

Found 330 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AAAAGATTGCATCACCAGGTAGTTTTCTCGATTAAGGAGGCAGCCTaGCCAGGGTGGGCCGTGGCCGGGCGGCAGCAGCATCACACTGGG +
Preference number: 1 (lower is better)
Translates to: KRLHHQVVFSIKEAA*PGWAVAGRQQHHTG
Trigger: CCCAGTGTGATGCTGCTGCCGCCCGGCCACGGCCCACCCTGGTCAGGCTGCCTCCTTAATCGAGAAAACTACCTGGTGATGCAATCTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359139.7
3UTR CCA 90 bp GGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTaGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTC +
Preference number: 1 (lower is better)
Translates to: GLEGLVFLRQSNLAA*FSASSKGYWVAARV
Trigger: GACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR GCA 90 bp CAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATaGATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCT +
Preference number: 1 (lower is better)
Translates to: QCQLQGLLGSCKGQL*IPVSQVFPTQALDS
Trigger: AGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR GCA 90 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTaGAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACC +
Preference number: 1 (lower is better)
Translates to: SCSLVQCQLQGLLGS*KGQLCIPVSQVFPT
Trigger: GGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR GCA 90 bp GGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTaGCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGC +
Preference number: 1 (lower is better)
Translates to: GPCVFKAVKSCSLVQ*QLQGLLGSCKGQLC
Trigger: GCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR CCA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCGCTGTGCTCTGGGCTTaGGGGCGGCTGAGGTGCCCC +
Preference number: 2 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVAVLWA*GRLRCP
Trigger: GGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR TCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCGGGCTTGGGGGCGGCTaGGGTGCCCCTCTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAAGLGGG*GAPLSS
Trigger: GGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCC...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR TCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAGGGCACGAGTGACCTaGGAGGCCCACTCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSRARVT*EAHSGR
Trigger: TCTGCCTGAGTGGGCCTCTCAGGTCACTCGTGCCCT...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR TCA 90 bp CCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTGCGGGCTTGGGGGCGGCTaGGGTGCCCCTCTGTCCTCC +
Preference number: 2 (lower is better)
Translates to: PRGPCVFKAVKSCSLVQCGLGGG*GAPLSS
Trigger: GGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCC...GCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR GCA 90 bp TGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGTGGGGGCGGCTGAGGTaGCCCTCTGTCCTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: CQLQGLLGSCKGQLCIPVWGRLR*PSVLQQ
Trigger: CTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCA...CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR CCA 90 bp TTTATTGGGAGTTGGGGGTTTGGGGTGCCCTGTCAGGTGATCAGAACATTAAAAGACCAGGGTGGGCCGTaGCCGGGCGGCAGCAGCATC +
Preference number: 2 (lower is better)
Translates to: FIGSWGFGVPCQVIRTLKDQGGP*PGGSSI
Trigger: GATGCTGCTGCCGCCCGGCCACGGCCCACCCTGGTC...TTTTAATGTTCTGATCACCTGACAGGGCACCCCAAACCCCCAACTCCCAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359139.7
3UTR-3UTR GCA 90 bp TGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGCCGACCTTATTGCTGTaGTCTGGGCTTGGGGGCGGC +
Preference number: 2 (lower is better)
Translates to: CQLQGLLGSCKGQLCIPVPTLLL*SGLGGG
Trigger: GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGG...CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR GCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCCCCACCCCGGCTCCTaGAGGCCGACCTTATTGCTG +
Preference number: 2 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQAPHPGS*RPTLLL
Trigger: CAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTGGGG...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR CCA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAGAAGAGACGCAAGCTaGGCCGTCCAACTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVRRDAS*AVQLVS
Trigger: TGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCT...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR TCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTAGGGCACGAGTGACCTaGGAGGCCCACTCAGGCAGA +
Preference number: 2 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCIRARVT*EAHSGR
Trigger: TCTGCCTGAGTGGGCCTCTCAGGTCACTCGTGCCCT...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR CCA 90 bp CAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCCCATCAGGTCCTGGTaGCATCTCAGGGTCCTGCCC +
Preference number: 2 (lower is better)
Translates to: QLCIPVSQVFPTQALDSAPIRSW*HLRVLP
Trigger: GGGCAGGACCCTGAGATGCCACCAGGACCTGATGGG...GGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR GCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCATGGGGGCGGCTGAGGTaGCCCTCTGTCCTCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPWGRLR*PSVLQQ
Trigger: CTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCA...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR CCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTTGGCCCATCAGGTCCTaGTGGCATCTCAGGGTCCTG +
Preference number: 2 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCIWPIRS*WHLRVL
Trigger: CAGGACCCTGAGATGCCACCAGGACCTGATGGGCCA...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR GCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCACCAACTGGTTTCAACTaGCAGCTTTACCAATGCAGC +
Preference number: 2 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSPTGFN*QLYQCS
Trigger: GCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGG...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR CAA 90 bp GCAGTCAAATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATaGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTT +
Preference number: 2 (lower is better)
Translates to: AVKSCSLVQCQLQGL*GSCKGQLCIPVSQV
Trigger: AACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATTTGACTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR CCA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGAGAAGAGACGCAAGCTaGGCCGTCCAACTGGTTTCA +
Preference number: 2 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQRRDAS*AVQLVS
Trigger: TGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCT...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR CCA 90 bp CCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTGCAGCTCCAAGGGCTATTaGGTAGCTGCAAGGGTCAAT +
Preference number: 2 (lower is better)
Translates to: PRGPCVFKAVKSCSLVQCSSKGY*VAARVN
Trigger: ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCT...GCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR CCA 72 bp CTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTaGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAG +
Preference number: 3 (lower is better)
Translates to: LLQADLIAVLWA*GRLRCPSVLQQ
Trigger: CTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR TCA 72 bp CATCACCAGGTAGTTTTCTCGATTAAGGAGGCAGCCTaGCCAGGGTGGGCCGTGGCCGGGCGGCAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: HHQVVFSIKEAA*PGWAVAGRQQH
Trigger: ATGCTGCTGCCGCCCGGCCACGGCCCACCCTGGTCAGGCTGCCTCCTTAATCGAGAAAACTACCTGGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359139.7
3UTR-3UTR CAA 90 bp GCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTTGCTGTGCTCTGGGCTaGGGGGCGGCTGAGGTGCCC +
Preference number: 3 (lower is better)
Translates to: ARPRGPCVFKAVKSCSLVCCALG*GAAEVP
Trigger: GGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCA...AACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR-3UTR CAA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCCAGCTCCAAGGGCTATaGGGTAGCTGCAAGGGTCAA +
Preference number: 3 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVQLQGL*GSCKGQ
Trigger: TTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTG...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR TCA 72 bp AATAATCTTCTGGACCCTTCTAGGACGACATGGCCGTaGCCGGTAGTGCTAGAAACCAGTCTTCGAGCCCCT +
Preference number: 3 (lower is better)
Translates to: NNLLDPSRTTWP*PVVLETSLRAP
Trigger: AGGGGCTCGAAGACTGGTTTCTAGCACTACCGGTCACGGCCATGTCGTCCTAGAAGGGTCCAGAAGATTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR GCA 72 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATaGATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCC +
Preference number: 3 (lower is better)
Translates to: LQGLLGSCKGQL*IPVSQVFPTQA
Trigger: GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR GCA 72 bp CTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTaGAAGGGTCAATTATGCATTCCTGTGAGTCAGGTT +
Preference number: 3 (lower is better)
Translates to: LVQCQLQGLLGS*KGQLCIPVSQV
Trigger: AACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR GCA 72 bp GTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTaGCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: VFKAVKSCSLVQ*QLQGLLGSCKG
Trigger: ACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR CCA 72 bp GGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTaGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCT +
Preference number: 3 (lower is better)
Translates to: GLVFLRQSNLAA*FSASSKGYWVA
Trigger: AGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR TCA 72 bp TATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTaGGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTG +
Preference number: 3 (lower is better)
Translates to: YWVAARVNYAFL*VRFFQPRPLTL
Trigger: CAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CACCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCCTTCGGAGGCCCGTGTaGAGGCCCGAGCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: HPGSCRPTLLLCSGLGGGLRRPV*RPERRP
Trigger: TGGCCTCCGCTCGGGCCTCCACACGGGCCTCCGAAG...GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCCATGGCGCCTGCTTCTaGGTCACCCTCCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGHGACF*VTLHRG
Trigger: CCCCCTGTGGAGGGTGACTCAGAAGCAGGCGCCATG...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000359139.7
CDS-3UTR GCA 90 bp CCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTGTCTCTTTACCTGCCCTaGGGGCCGGGCGTCGCGGCA +
Preference number: 4 (lower is better)
Translates to: PRLLQADLIAVLWAWGRLSLYLP*GPGVAA
Trigger: TGCCGCGACGCCCGGCCCGCAGGGCAGGTAAAGAGA...CAGCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCCCAGGCACCCTGTGCTaGGCACAGGGACATCCCTGC +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGPGTLC*AQGHPC
Trigger: GCAGGGATGTCCCTGTGCCCAGCACAGGGTGCCTGG...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCGTTTGTGTGCAGCAGTaGTGCCATGAGGCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGVCVQQ*CHEAGA
Trigger: GGCGCCCGCCTCATGGCAGCACTGCTGCACACAAAC...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCCGGTTCCCGTTCTCATaGGGAGGCTCCACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGRFPFS*GGSTLL
Trigger: GAGCAGGGTGGAGCCTCCGCATGAGAACGGGAACCG...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CACCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTGTTGTCAGGGAGGCTaGCGGCCGGCTGGGGAGTCT +
Preference number: 4 (lower is better)
Translates to: HPGSCRPTLLLCSGLGGGCCQGG*RPAGES
Trigger: AGACTCCCCAGCCGGCCGCCAGCCTCCCTGACAACA...GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCCCCATCAGGTCCTGGTaGCATCTCAGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGPIRSW*HLRVLP
Trigger: GGGCAGGACCCTGAGATGCCACCAGGACCTGATGGG...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCTCAGCCGAGGCTCGATaGCGTGTAGTACGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGSAEAR*RVVRCC
Trigger: GCAGCAGCGTACTACACGGCATCGAGCCTCGGCTGA...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCTGTTCCCACGTCTCATaGCACCCGCTGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGCSHVS*HPLPAC
Trigger: ACACGCAGGCAGCGGGTGGCATGAGACGTGGGAACA...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTGGGCCTTGGCTCCGGCTaGCCTCAGCATGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: PRLLQADLIAVLWAWGRLGLGSG*PQHGCI
Trigger: AATGCAGCCATGCTGAGGGCAGCCGGAGCCAAGGCC...CAGCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp TGCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGGACCGCCACGGCCAGTaGAGAAGAGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CCALGLGAAEVPLCPPAGDRHGQ*RRDCWG
Trigger: ACCCCAGCAGTCTCTTCTGCACTGGCCGTGGCGGTC...CCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CACCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCGGGCACAGCCACGGCTaGGGCAGCAGTCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: HPGSCRPTLLLCSGLGGGGHSHG*GSSHFL
Trigger: AAGGAAGTGACTGCTGCCCCAGCCGTGGCTGTGCCC...GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTGTGTTCCCACGTCTCATaGCACCCGCTGCCTGCGTGT +
Preference number: 4 (lower is better)
Translates to: PRLLQADLIAVLWAWGRLCSHVS*HPLPAC
Trigger: ACACGCAGGCAGCGGGTGGCATGAGACGTGGGAACA...CAGCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TGCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGTGTGAGGAGCGGGTCTaGCTCCAGAGCCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: CCALGLGAAEVPLCPPAGCEERV*LQSLLQ
Trigger: CTGCAAGAGGCTCTGGAGCCAGACCCGCTCCTCACA...CCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCGGGTTGAGCAGGAGCTaGTGGAAGTCCTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGGLSRS*WKSFSR
Trigger: TCGGCTGAAGGACTTCCACCAGCTCCTGCTCAACCC...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR CAA 72 bp GCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTaGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: APAGRPYCCALG*GAAEVPLCPPA
Trigger: TGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp TGCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGTATAATCTCTTTACCTaGCCTGCGGGCCGGGCGTCG +
Preference number: 4 (lower is better)
Translates to: CCALGLGAAEVPLCPPAGYNLFT*PAGRAS
Trigger: CGACGCCCGGCCCGCAGGGCAGGTAAAGAGATTATA...CCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CACCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTTGAGCAGGAGCTGGTaGAAGTCCTTCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: HPGSCRPTLLLCSGLGGGLSRSW*KSFSRG
Trigger: GCCTCGGCTGAAGGACTTCCACCAGCTCCTGCTCAA...GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp TGCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGGCTGCTGACAGCGTATaGCCTTTCCAGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: CCALGLGAAEVPLCPPAGAADSV*PFQSLR
Trigger: TCTCAGGGACTGGAAAGGTCATACGCTGTCAGCAGC...CCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CACCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTGCAGCCTGGTTCAGTaGCAGCTCCAAGGGCTATTG +
Preference number: 4 (lower is better)
Translates to: HPGSCRPTLLLCSGLGGGCSLVQ*QLQGLL
Trigger: CAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCA...GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTGTCATCCTGGCTCGGGTaGATCAACTCCACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: PRLLQADLIAVLWAWGRLSSWLG*INSTSL
Trigger: GAGGCTTGTGGAGTTGATCCACCCGAGCCAGGATGA...CAGCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCTGCCTATCTTCATCCTaGCTCGGGTGGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGCLSSS*LGWINS
Trigger: GGAGTTGATCCACCCGAGCCAGGATGAAGATAGGCA...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTAGGCTGGCGGCCGGCTaGGGAGTCTCCAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: SCSLVQCQLQGLLGSCKGRLAAG*GVSRLR
Trigger: CCGGAGCCTGGAGACTCCCCAGCCGGCCGCCAGCCT...ACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCACAGTGCAGGACGTCCTaGCGGAGCCCGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSQCRTS*RSPAGS
Trigger: GGAGCCAGCCGGGCTCCGGCAGGACGTCCTGCACTG...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCCCACTCAGGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCATGAGGCGGGCGCCATaGAGACGGGCATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: AHSGRRDASWAVQLVSTAMRRAP*RRAFPR
Trigger: CCTGGGGAATGCCCGTCTGCATGGCGCCCGCCTCAT...GGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCCTGAGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCAAGGCAGTCAAATCTTaGAGCCTGGTTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGKAVKS*SLVQCQ
Trigger: CTGGCACTGAACCAGGCTGCAAGATTTGACTGCCTT...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTGACCAGGCAGCACTTCTaGAACAGGTGGGTCACCATT +
Preference number: 4 (lower is better)
Translates to: PRLLQADLIAVLWAWGRLTRQHF*NRWVTI
Trigger: AATGGTGACCCACCTGTTCCAGAAGTGCTGCCTGGT...CAGCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCGAGCAGCAGAAAGGTTaGAAGTCAGTGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGEQQKG*KSVNLA
Trigger: GGCCAAGTTCACTGACTTCCAACCTTTCTGCTGCTC...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGAGGCCAGGGCGCTGGTaGAGGCAAAGCCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARRPGRW*RQSPGG
Trigger: GCCGCCCGGGCTTTGCCTCCACCAGCGCCCTGGCCT...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TGCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGAGAAGAGACGCAAGCTaGGCCGTCCAACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: CCALGLGAAEVPLCPPAGRRDAS*AVQLVS
Trigger: TGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCT...CCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGGGGCTTGGGGGCGGCTaGGGTGCCCCTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: IPVSQVFPTQALDSALSLGLGGG*GAPLSS
Trigger: GGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCC...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCCCACTCAGGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCCCTCTTGCAGCTGACTaGCCTGGTCTCTGCCCAGCC +
Preference number: 4 (lower is better)
Translates to: AHSGRRDASWAVQLVSTAPLAAD*PGLCPA
Trigger: GGCTGGGCAGAGACCAGGGCAGTCAGCTGCAAGAGG...GGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCCTGAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGGCTGGCGGCCGGCTaGGGAGTCTCCAGGCTCCGG +
Preference number: 4 (lower is better)
Translates to: KRRKLGRPTGFNCQLYQCRLAAG*GVSRLR
Trigger: CCGGAGCCTGGAGACTCCCCAGCCGGCCGCCAGCCT...GCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCCCACTCAGGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAAGAGACTGCTGGGGTaGGTATGGCGGGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: AHSGRRDASWAVQLVSTAKRLLG*VWRGQP
Trigger: AGGCTGGCCCCGCCATACCCACCCCAGCAGTCTCTT...GGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCCTGAGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp ACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATGGGCTTGGGGGCGGCTaGGGTGCCCCTCTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGTSLPGLEGLVFLRQSNGLGGG*GAPLSS
Trigger: GGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCC...ATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAGCGGAGGCTCCACCCTaGTCTCGGATCCGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSAEAPP*SRIRWL
Trigger: AAGCCAGCGGATCCGAGAGCAGGGTGGAGCCTCCGC...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATGCGGAGGCTCCACCCTaGTCTCGGATCCGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: AAWFSASSKGYWVAARVNAEAPP*SRIRWL
Trigger: AAGCCAGCGGATCCGAGAGCAGGGTGGAGCCTCCGC...ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGTGGGGGCGGCTGAGGTaGCCCTCTGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARWGRLR*PSVLQQ
Trigger: CTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCA...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCACTGCTGGGGTGGGTATaGCGGGGCCAGCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSLLGWV*RGQPCS
Trigger: TGAGCAAGGCTGGCCCCGCCATACCCACCCCAGCAG...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCCGGAGGCCAGGGCGCTaGTGGAGGCAAAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: PGLEGLVFLRQSNLAAWFRRPGR*WRQSPG
Trigger: GCCCGGGCTTTGCCTCCACCAGCGCCCTGGCCTCCG...GAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CACCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCAGTCTGAGAAGCATTTaGCTGCCTATCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: HPGSCRPTLLLCSGLGGGSLRSI*LPIFIL
Trigger: CAGGATGAAGATAGGCAGTCAAATGCTTCTCAGACT...GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCACACCTGAGTCCCACTaGCGAGGCAGCTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: GRRDASWAVQLVSTASFTTPESH*RGSSPS
Trigger: GGACGGAGAGCTGCCTCGTCAGTGGGACTCAGGTGT...GGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGCCACATGGCGCCTTCTaGGTCACCCTCCACAGGGGG +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARPHGAF*VTLHRG
Trigger: CCCCCTGTGGAGGGTGACTCAGAAGGCGCCATGTGG...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612753.5
CDS-3UTR TCA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCAATTATGCATTCCTGTaGGTCAGGTTTTTCCAACCC +
Preference number: 4 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGNYAFL*VRFFQP
Trigger: GGGTTGGAAAAACCTGACTCACAGGAATGCATAATT...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCCCACTCAGGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCTCCTCCATGCACTGCTaGCTGCACAGGAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: AHSGRRDASWAVQLVSTASSMHC*LHRKSS
Trigger: GCTGGACTTCCTGTGCAGGCAGCAGTGCATGGAGGA...GGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCCTGAGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCCAGTGCAGGACGTCCTaGCGGAGCCCGGCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PGLEGLVFLRQSNLAAWFQCRTS*RSPAGS
Trigger: GGAGCCAGCCGGGCTCCGGCAGGACGTCCTGCACTG...GAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTGTGTGCAGCAGTGCTaGCATGAGGCGGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: AAWFSASSKGYWVAARVNCVQQC*HEAGAM
Trigger: CATGGCGCCCGCCTCATGGCAGCACTGCTGCACACA...ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATGGCCTTGGCTCCGGCTaGCCTCAGCATGGCTGCATT +
Preference number: 4 (lower is better)
Translates to: AAWFSASSKGYWVAARVNGLGSG*PQHGCI
Trigger: AATGCAGCCATGCTGAGGGCAGCCGGAGCCAAGGCC...ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCCCACTCAGGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCTGCTCTCGGATCCGCTaGCTTCTGTCCTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: AHSGRRDASWAVQLVSTACSRIR*LLSSPH
Trigger: GTGAGGAGAGGACAGAAGCCAGCGGATCCGAGAGCA...GGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCCTGAGTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCCTCCAAACCTGGGTCTaGCCATCACCCGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GRRDASWAVQLVSTASFTLQTWV*PSPGQH
Trigger: GTGCTGCCCGGGTGATGGCCAGACCCAGGTTTGGAG...GGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAGGGCACAGCCACGGCTaGGGCAGCAGTCACTTCCTT +
Preference number: 4 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSGHSHG*GSSHFL
Trigger: AAGGAAGTGACTGCTGCCCCAGCCGTGGCTGTGCCC...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTGACCAGGGTGGGCCGTaGCCGGGCGGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCIDQGGP*PGGSSI
Trigger: GATGCTGCTGCCGCCCGGCCACGGCCCACCCTGGTC...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAAGGCCAGGGCGCTGGTaGAGGCAAAGCCCGGGCGGC +
Preference number: 4 (lower is better)
Translates to: TSLPGLEGLVFLRQSNLARPGRW*RQSPGG
Trigger: GCCGCCCGGGCTTTGCCTCCACCAGCGCCCTGGCCT...TGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCGGAGGCCAGGGCGCTaGTGGAGGCAAAGCCCGGGC +
Preference number: 4 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCIRRPGR*WRQSPG
Trigger: GCCCGGGCTTTGCCTCCACCAGCGCCCTGGCCTCCG...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGCTTCGGAGGCCCGTGTaGAGGCCCGAGCGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CQLQGLLGSCKGQLCIPVLRRPV*RPERRP
Trigger: TGGCCTCCGCTCGGGCCTCCACACGGGCCTCCGAAG...CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTGCTGTGCTCTGGGCTTaGGGGCGGCTGAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: ARPRGPCVFKAVKSCSLVAVLWA*GRLRCP
Trigger: GGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC...AACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GCCCACTCAGGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAAGGTGAGTAACACCTaGGTCCCACTGACGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AHSGRRDASWAVQLVSTAKVSNT*VPLTRQ
Trigger: CTGCCTCGTCAGTGGGACTCAGGTGTTACTCACCTT...GGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCCTGAGTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCGCAGCAGTGCTGCCATaGGGCGGGCGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: PGLEGLVFLRQSNLAAWFAAVLP*GGRHAD
Trigger: GTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGC...GAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp TGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGGGCCGGTGGGGCACCTaGCCCAGGTGCATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: CQLQGLLGSCKGQLCIPVGRWGT*PRCISV
Trigger: CACAGAGATGCACCTGGGGCAGGTGCCCCACCGGCC...CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCCCCCACCCCGGCTCCTaGAGGCCGACCTTATTGCTG +
Preference number: 4 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAAPHPGS*RPTLLL
Trigger: CAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTGGGG...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCGGGTTGAGCAGGAGCTaGTGGAAGTCCTTCAGCCGA +
Preference number: 4 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVGLSRS*WKSFSR
Trigger: TCGGCTGAAGGACTTCCACCAGCTCCTGCTCAACCC...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGTCGCCATCCTCGCTGTaGGAGCCCCCAGAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARSPSSL*EPPEEL
Trigger: TAGCTCCTCTGGGGGCTCCCACAGCGAGGATGGCGA...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCCTGCTGGGGTGGGTATaGCGGGGCCAGCCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KRRKLGRPTGFNCQLYQCLLGWV*RGQPCS
Trigger: TGAGCAAGGCTGGCCCCGCCATACCCACCCCAGCAG...GCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTGACCAGGGTGGGCCGTaGCCGGGCGGCAGCAGCATC +
Preference number: 4 (lower is better)
Translates to: SWAVQLVSTASFTNAAFIDQGGP*PGGSSI
Trigger: GATGCTGCTGCCGCCCGGCCACGGCCCACCCTGGTC...AATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGCCACCTGCATACCTGTaGTCTCCCCCTGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARPPAYL*SPPARH
Trigger: GTGCCTGGCAGGGGGAGACCACAGGTATGCAGGTGG...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCTGGGAGTTGGGGGTTTaGGGTGCCCTGTCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVWELGV*GALSGD
Trigger: ATCACCTGACAGGGCACCCCAAACCCCCAACTCCCA...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTGCGACTCCAGCGCTGTaGGGAGCGGGTCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCIATPAL*GAGLAP
Trigger: TGGAGCCAGACCCGCTCCTCACAGCGCTGGAGTCGC...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp ACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCGACTCCAGCGCTGTaGGGAGCGGGTCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TSLPGLEGLVFLRQSNLAATPAL*GAGLAP
Trigger: TGGAGCCAGACCCGCTCCTCACAGCGCTGGAGTCGC...TGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCATCTTCTTGGGCGGGTTaGGCAGGAGCTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSSSWAG*AGAGGS
Trigger: ACTTCCACCAGCTCCTGCTCAACCCGCCCAAGAAGA...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCATCAGAGAAGGCCTGCTaGAGGGACAGCTCGTTAGGG +
Preference number: 4 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSSEKAC*RDSSLG
Trigger: CCCTAACGAGCTGTCCCTTCAGCAGGCCTTCTCTGA...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612753.5
CDS-3UTR TCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCAGGGCACGAGTGACCTaGGAGGCCCACTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAARARVT*EAHSGR
Trigger: TCTGCCTGAGTGGGCCTCTCAGGTCACTCGTGCCCT...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCCCCTTGACTCTGCCCTaGGCTTGCAGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVPLTLP*ACSWIQ
Trigger: TTGTATCCAGCTGCAAGCTCAGGGCAGAGTCAAGGG...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCACCATGCACTGCTGCCTaGACAGGAAGTCCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSPCTAA*TGSPAA
Trigger: AGCTGCTGGACTTCCTGTGCAGGCAGCAGTGCATGG...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGTCTCTTTACCTGCCCTaGGGGCCGGGCGTCGCGGCA +
Preference number: 4 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQSLYLP*GPGVAA
Trigger: TGCCGCGACGCCCGGCCCGCAGGGCAGGTAAAGAGA...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAACCGACCTTATTGCTGTaGTCTGGGCTTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKPTLLL*SGLGGG
Trigger: GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGG...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCCCGACCTTATTGCTGTaGTCTGGGCTTGGGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAAPTLLL*SGLGGG
Trigger: GCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGG...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAGCCGGCAGAGCTCCTaGTTGATGCTGGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVSRQSS*LMLGVF
Trigger: AAACACACCCAGCATCAACCAGGAGCTCTGCCGGCT...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTACACTGCCGTCCACATaGCGCCTTCTGAGTCACCCT +
Preference number: 4 (lower is better)
Translates to: SCSLVQCQLQGLLGSCKGTLPST*RLLSHP
Trigger: AGGGTGACTCAGAAGGCGCCATGTGGACGGCAGTGT...ACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612753.5
CDS-3UTR CCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTCGCCATCCTCGCTGTaGGAGCCCCCAGAGGAGCTA +
Preference number: 4 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAASPSSL*EPPEEL
Trigger: TAGCTCCTCTGGGGGCTCCCACAGCGAGGATGGCGA...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCAGCAGTCACTTCCTTTaGCGCGGGGCAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAASSHFL*RGAGRA
Trigger: AGCCCTGCCTGCCCCGCGCCAAAGGAAGTGACTGCT...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGGGTGGCCACCATGGCTaGGGCTGCTGTGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: IPVSQVFPTQALDSALSLGGHHG*GCCDCH
Trigger: ATGGCAGTCACAGCAGCCCCAGCCATGGTGGCCACC...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp TGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGCACCGAGGCGGTCGCTaGTCTGCGGCACATCACAAG +
Preference number: 4 (lower is better)
Translates to: CQLQGLLGSCKGQLCIPVHRGGR*SAAHHK
Trigger: CTTGTGATGTGCCGCAGATCAGCGACCGCCTCGGTG...CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTAGAGCCTCTTGCAGCTaGCTGCCCTGGTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARPRGPCVFKAVKSCSLVRASCS*LPWSLP
Trigger: GGGCAGAGACCAGGGCAGTCAGCTGCAAGAGGCTCT...AACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATGCAGCAGTGCTGCCATaGGGCGGGCGCCATGCAGAC +
Preference number: 4 (lower is better)
Translates to: KLGRPTGFNCQLYQCSIYAAVLP*GGRHAD
Trigger: GTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGC...ATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTACTTCCAGAACATCGTaGCGGCCGCAGAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: SCSLVQCQLQGLLGSCKGTSRTS*RPQSFC
Trigger: ACAGAAGCTCTGCGGCCGTCACGATGTTCTGGAAGT...ACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGGGCACGAGTGACCTaGGAGGCCCACTCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: PGLEGLVFLRQSNLAAWFRARVT*EAHSGR
Trigger: TCTGCCTGAGTGGGCCTCTCAGGTCACTCGTGCCCT...GAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCATCCTGCAGCGTCACATaGTCCTTGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSSCSVT*SLSSSL
Trigger: CAAGCTGCTGGACAAGGAGCATGTGACGCTGCAGGA...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCCCACTCAGGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCATGTTCTTCAGAAGCTaGTCCACACAGTCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: AHSGRRDASWAVQLVSTAMFFRS*STQSCD
Trigger: GTCGCAGGACTGTGTGGAGCAGCTTCTGAAGAACAT...GGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCCTGAGTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCTCAGCCGAGGCTCGATaGCGTGTAGTACGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KRRKLGRPTGFNCQLYQCSAEAR*RVVRCC
Trigger: GCAGCAGCGTACTACACGGCATCGAGCCTCGGCTGA...GCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCATGAGGCGGGCGCCATaGAGACGGGCATTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQAMRRAP*RRAFPR
Trigger: CCTGGGGAATGCCCGTCTGCATGGCGCCCGCCTCAT...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATGGCCGGTGGGGCACCTaGCCCAGGTGCATCTCTGTG +
Preference number: 4 (lower is better)
Translates to: KLGRPTGFNCQLYQCSIYGRWGT*PRCISV
Trigger: CACAGAGATGCACCTGGGGCAGGTGCCCCACCGGCC...ATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAACAGTGCAGAAGAGACTaGTGGGGTGGGTATGGCGGG +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKQCRRD*WGGYGG
Trigger: CCCGCCATACCCACCCCAGCAGTCTCTTCTGCACTG...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAAGCAGGCCGACCTTATTaGTGTGCTCTGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKAGRPY*CALGLG
Trigger: CCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGC...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTCTGCCGGAGCCCGGCTaGCTCCACACAGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: SWAVQLVSTASFTNAAFILPEPG*LHTADQ
Trigger: CTGGTCAGCTGTGTGGAGCCAGCCGGGCTCCGGCAG...AATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGCGGCTGCCCTCAGCATaGCTGCATTCTGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: IPVSQVFPTQALDSALSLRLPSA*LHSVST
Trigger: GGTGGACACAGAATGCAGCCATGCTGAGGGCAGCCG...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCCCATCAGGTCCTGGTaGCATCTCAGGGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: ARPRGPCVFKAVKSCSLVPIRSW*HLRVLP
Trigger: GGGCAGGACCCTGAGATGCCACCAGGACCTGATGGG...AACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGCCACCTGCATACCTGTaGTCTCCCCCTGCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: CQLQGLLGSCKGQLCIPVPPAYL*SPPARH
Trigger: GTGCCTGGCAGGGGGAGACCACAGGTATGCAGGTGG...CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTGCCACCGAGGCGGTCGCTaGTCTGCGGCACATCACAAG +
Preference number: 4 (lower is better)
Translates to: PRGPCVFKAVKSCSLVQCHRGGR*SAAHHK
Trigger: CTTGTGATGTGCCGCAGATCAGCGACCGCCTCGGTG...GCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTACACCTGAGTCCCACTaGCGAGGCAGCTCTCCGTCC +
Preference number: 4 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCITPESH*RGSSPS
Trigger: GGACGGAGAGCTGCCTCGTCAGTGGGACTCAGGTGT...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGTCTTCTTGGGCGGGTTaGGCAGGAGCTGGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: IPVSQVFPTQALDSALSLSSWAG*AGAGGS
Trigger: ACTTCCACCAGCTCCTGCTCAACCCGCCCAAGAAGA...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAAGTAAGTCCATCGTGTTaGGCCGGCAGAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKVSPSC*AGRAPG
Trigger: ACCAGGAGCTCTGCCGGCTCAACACGATGGACTTAC...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCGTAAGTCCATCGTGTTaGGCCGGCAGAGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KRRKLGRPTGFNCQLYQCVSPSC*AGRAPG
Trigger: ACCAGGAGCTCTGCCGGCTCAACACGATGGACTTAC...GCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGACTTCCAGAACATCGTaGCGGCCGCAGAGCTTCTGT +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARTSRTS*RPQSFC
Trigger: ACAGAAGCTCTGCGGCCGTCACGATGTTCTGGAAGT...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGTCACCAGCTCCTCCATaGACTGCTGCCTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: PARPRGPCVFKAVKSCSLSPAPP*TAACTG
Trigger: TCCTGTGCAGGCAGCAGTGCATGGAGGAGCTGGTGA...CAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp TTTATTGGGAGTTGGGGGTTTGGGGTGCCCTGTCAGGTGATCAGAACATTAAAATGGGGGCGGCTGAGGTaGCCCTCTGTCCTCCAGCAG +
Preference number: 4 (lower is better)
Translates to: FIGSWGFGVPCQVIRTLKWGRLR*PSVLQQ
Trigger: CTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCA...TTTTAATGTTCTGATCACCTGACAGGGCACCCCAAACCCCCAACTCCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTTCCCCACCCCGGCTCCTaGAGGCCGACCTTATTGCTG +
Preference number: 4 (lower is better)
Translates to: AGPSNWFQLPALPMQHLFPHPGS*RPTLLL
Trigger: CAGCAATAAGGTCGGCCTGCAGGAGCCGGGGTGGGG...AAATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TTTATTGGGAGTTGGGGGTTTGGGGTGCCCTGTCAGGTGATCAGAACATTAAAACTGCCGGAGCCCGGCTaGCTCCACACAGCTGACCAG +
Preference number: 4 (lower is better)
Translates to: FIGSWGFGVPCQVIRTLKLPEPG*LHTADQ
Trigger: CTGGTCAGCTGTGTGGAGCCAGCCGGGCTCCGGCAG...TTTTAATGTTCTGATCACCTGACAGGGCACCCCAAACCCCCAACTCCCAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTCCTCACGGGCAGCGTaGGAGAGAATAGCGGCTATG +
Preference number: 4 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAASSRAA*ERIAAM
Trigger: CATAGCCGCTATTCTCTCCCACGCTGCCCGTGAGGA...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCCTCACGGGCAGCGTaGGAGAGAATAGCGGCTATG +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKSSRAA*ERIAAM
Trigger: CATAGCCGCTATTCTCTCCCACGCTGCCCGTGAGGA...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTTCATCATCAAAGGGCTaGATGCGGTCACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SCSLVQCQLQGLLGSCKGSSSKG*MRSLQQ
Trigger: CTGCTGCAGTGACCGCATCCAGCCCTTTGATGATGA...ACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTCCAAACCTGGGTCTaGCCATCACCCGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQALQTWV*PSPGQH
Trigger: GTGCTGCCCGGGTGATGGCCAGACCCAGGTTTGGAG...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCGGCTGCCCTCAGCATaGCTGCATTCTGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: TGTSLPGLEGLVFLRQSNRLPSA*LHSVST
Trigger: GGTGGACACAGAATGCAGCCATGCTGAGGGCAGCCG...ATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCAGCAGTCACTTCCTTTaGCGCGGGGCAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QLCIPVSQVFPTQALDSASSHFL*RGAGRA
Trigger: AGCCCTGCCTGCCCCGCGCCAAAGGAAGTGACTGCT...GGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAGCTGTGCTCTGGGCTTaGGGGCGGCTGAGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPAVLWA*GRLRCP
Trigger: GGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTTGGCCCATCAGGTCCTaGTGGCATCTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ARPRGPCVFKAVKSCSLVWPIRS*WHLRVL
Trigger: CAGGACCCTGAGATGCCACCAGGACCTGATGGGCCA...AACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATCCAGGCACCCTGTGCTaGGCACAGGGACATCCCTGC +
Preference number: 4 (lower is better)
Translates to: KLGRPTGFNCQLYQCSIYPGTLC*AQGHPC
Trigger: GCAGGGATGTCCCTGTGCCCAGCACAGGGTGCCTGG...ATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGAGCAGCTTCTGGTTCTaGGCCTTACACTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARSSFWF*ALHSCK
Trigger: CTTGCAGGAGTGTAAGGCTCAGAACCAGAAGCTGCT...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGTGGCGAGCAGAGGATTaGGAGGCGGCTCATGGTCCA +
Preference number: 4 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQWRAED*EAAHGP
Trigger: TGGACCATGAGCCGCCTCTCAATCCTCTGCTCGCCA...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCCAGGTCCATAAGCGCTaGGGTGCCGATGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: KRRKLGRPTGFNCQLYQCQVHKR*GADVLQ
Trigger: TTGAAGCACATCGGCACCTCAGCGCTTATGGACCTG...GCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTAGTACGCTGCTGCTaGCAGCGTATGACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARVVRCC*QRMTFP
Trigger: TGGAAAGGTCATACGCTGTCAGCAGCAGCGTACTAC...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAAAGGCGGTCGCTGATCTaGGGCACATCACAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKRRSLI*GTSQVR
Trigger: TCTGACTTGTGATGTGCCGCAGATCAGCGACCGCCT...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGGCTGAGGTGCCGATGTaGTTCAACACCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: IPVSQVFPTQALDSALSLAEVPM*FNTRLM
Trigger: CATCAGCCTGGTGTTGAAGCACATCGGCACCTCAGC...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAAGCTGAGGTGCCGATGTaGTTCAACACCAGGCTGATG +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKAEVPM*FNTRLM
Trigger: CATCAGCCTGGTGTTGAAGCACATCGGCACCTCAGC...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATATGTTCTTCAGAAGCTaGTCCACACAGTCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: AAWFSASSKGYWVAARVNMFFRS*STQSCD
Trigger: GTCGCAGGACTGTGTGGAGCAGCTTCTGAAGAACAT...ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTTGTTTGTGTGCAGCAGTaGTGCCATGAGGCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: AGPSNWFQLPALPMQHLFVCVQQ*CHEAGA
Trigger: GGCGCCCGCCTCATGGCAGCACTGCTGCACACAAAC...AAATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCGGCCTCAAACAGAGCTaGGCTGGGACTGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQAGLKQS*AGTVLV
Trigger: GACGAGGACAGTCCCAGCGCAGCTCTGTTTGAGGCC...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCGGCCTCAAACAGAGCTaGGCTGGGACTGTCCTCGTC +
Preference number: 4 (lower is better)
Translates to: QLCIPVSQVFPTQALDSAGLKQS*AGTVLV
Trigger: GACGAGGACAGTCCCAGCGCAGCTCTGTTTGAGGCC...GGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp ACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCAGGCCGACCTTATTaGTGTGCTCTGGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TSLPGLEGLVFLRQSNLAAGRPY*CALGLG
Trigger: CCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGC...TGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTAAGGCAGTCAAATCTTaGAGCCTGGTTCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SCSLVQCQLQGLLGSCKGKAVKS*SLVQCQ
Trigger: CTGGCACTGAACCAGGCTGCAAGATTTGACTGCCTT...ACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCATGTGAGGAGCGGGTCTaGCTCCAGAGCCTCTTGCAG +
Preference number: 4 (lower is better)
Translates to: TSLPGLEGLVFLRQSNLACEERV*LQSLLQ
Trigger: CTGCAAGAGGCTCTGGAGCCAGACCCGCTCCTCACA...TGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGACCAGGCAGCACTTCTaGAACAGGTGGGTCACCATT +
Preference number: 4 (lower is better)
Translates to: NLAAWFSASSKGYWVAARTRQHF*NRWVTI
Trigger: AATGGTGACCCACCTGTTCCAGAAGTGCTGCCTGGT...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTTGGTGGCCACCATGGCTaGGGCTGCTGTGACTGCCAT +
Preference number: 4 (lower is better)
Translates to: AGPSNWFQLPALPMQHLFGGHHG*GCCDCH
Trigger: ATGGCAGTCACAGCAGCCCCAGCCATGGTGGCCACC...AAATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCTGGCCCATCAGGTCCTaGTGGCATCTCAGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQAWPIRS*WHLRVL
Trigger: CAGGACCCTGAGATGCCACCAGGACCTGATGGGCCA...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATTGGGAGTTGGGGGTTTaGGGTGCCCTGTCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: TGTSLPGLEGLVFLRQSNWELGV*GALSGD
Trigger: ATCACCTGACAGGGCACCCCAAACCCCCAACTCCCA...ATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCCGGTTTTTCTTGCAATaGGATTGCCAATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVRFFLQ*DCQWSC
Trigger: GCAAGACCATTGGCAATCTCATTGCAAGAAAAACCG...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCGTAGTACGCTGCTGCTaGCAGCGTATGACCTTTCCA +
Preference number: 4 (lower is better)
Translates to: KRRKLGRPTGFNCQLYQCVVRCC*QRMTFP
Trigger: TGGAAAGGTCATACGCTGTCAGCAGCAGCGTACTAC...GCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGTCACCAGCTCCTCCATaGACTGCTGCCTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQSPAPP*TAACTG
Trigger: TCCTGTGCAGGCAGCAGTGCATGGAGGAGCTGGTGA...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCCTGGGTGTGTTTGTGTaGAGCAGTGCTGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: PGLEGLVFLRQSNLAAWFLGVFV*SSAAMR
Trigger: CCTCATGGCAGCACTGCTGCACACAAACACACCCAG...GAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCTGCCCTCAGCATGGCTaGATTCTGTGTCCACCGGAG +
Preference number: 4 (lower is better)
Translates to: QLCIPVSQVFPTQALDSACPQHG*ILCPPE
Trigger: CTCCGGTGGACACAGAATGCAGCCATGCTGAGGGCA...GGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTTGCCCTCAGCATGGCTaGATTCTGTGTCCACCGGAG +
Preference number: 4 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCICPQHG*ILCPPE
Trigger: CTCCGGTGGACACAGAATGCAGCCATGCTGAGGGCA...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCGCCAGCCTTGCTCAGTaGTGTGGTGATGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: QLCIPVSQVFPTQALDSAASLAQ*CGDGHS
Trigger: ACTGTGGCCATCACCACAGCACTGAGCAAGGCTGGC...GGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp ACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCAGCCTTGCTCAGTaGTGTGGTGATGGCCACAGT +
Preference number: 4 (lower is better)
Translates to: TSLPGLEGLVFLRQSNLAASLAQ*CGDGHS
Trigger: ACTGTGGCCATCACCACAGCACTGAGCAAGGCTGGC...TGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTTCAGTGCAGAAGAGACTaGTGGGGTGGGTATGGCGGG +
Preference number: 4 (lower is better)
Translates to: AGPSNWFQLPALPMQHLFQCRRD*WGGYGG
Trigger: CCCGCCATACCCACCCCAGCAGTCTCTTCTGCACTG...AAATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCCAACTGGTTTCAACTaGCAGCTTTACCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: SCSLVQCQLQGLLGSCKGPTGFN*QLYQCS
Trigger: GCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGG...ACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTTCATCCTGGCTCGGGTaGATCAACTCCACAAGCCTC +
Preference number: 4 (lower is better)
Translates to: ARPRGPCVFKAVKSCSLVSSWLG*INSTSL
Trigger: GAGGCTTGTGGAGTTGATCCACCCGAGCCAGGATGA...AACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCTTGAGCAGGAGCTGGTaGAAGTCCTTCAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: QLCIPVSQVFPTQALDSALSRSW*KSFSRG
Trigger: GCCTCGGCTGAAGGACTTCCACCAGCTCCTGCTCAA...GGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCCCTCCAGCACACCAATaGTGGTCAGGATCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAAPPAHQ*WSGSLS
Trigger: AGAAAGCGATCCTGACCACCATTGGTGTGCTGGAGG...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTAGCCGGCAGAGCTCCTaGTTGATGCTGGGTGTGTTT +
Preference number: 4 (lower is better)
Translates to: ARPRGPCVFKAVKSCSLVSRQSS*LMLGVF
Trigger: AAACACACCCAGCATCAACCAGGAGCTCTGCCGGCT...AACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTTGCTCTCGGATCCGCTaGCTTCTGTCCTCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCICSRIR*LLSSPH
Trigger: GTGAGGAGAGGACAGAAGCCAGCGGATCCGAGAGCA...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCTCATCATCAAAGGGCTaGATGCGGTCACTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: KRRKLGRPTGFNCQLYQCSSSKG*MRSLQQ
Trigger: CTGCTGCAGTGACCGCATCCAGCCCTTTGATGATGA...GCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
3UTR CAA 72 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATaGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SCSLVQCQLQGL*GSCKGQLCIPV
Trigger: CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCAGGTCCATAAGCGCTaGGGTGCCGATGTGCTTCAA +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQAQVHKR*GADVLQ
Trigger: TTGAAGCACATCGGCACCTCAGCGCTTATGGACCTG...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp TCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTAGTCTGAGAAGCATTTaGCTGCCTATCTTCATCCTG +
Preference number: 4 (lower is better)
Translates to: SCSLVQCQLQGLLGSCKGSLRSI*LPIFIL
Trigger: CAGGATGAAGATAGGCAGTCAAATGCTTCTCAGACT...ACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAAGAGCCTCTTGCAGCTaGCTGCCCTGGTCTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPRASCS*LPWSLP
Trigger: GGGCAGAGACCAGGGCAGTCAGCTGCAAGAGGCTCT...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTGCAAGGTGAGTAACACCTaGGTCCCACTGACGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRGPCVFKAVKSCSLVQCKVSNT*VPLTRQ
Trigger: CTGCCTCGTCAGTGGGACTCAGGTGTTACTCACCTT...GCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTGACCTTTCCAGTCCCTaGGAAAAGGAGTCCACCAAG +
Preference number: 4 (lower is better)
Translates to: ARPRGPCVFKAVKSCSLVDLSSP*EKESTK
Trigger: CTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTC...AACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCCCTTGACTCTGCCCTaGGCTTGCAGCTGGATACAA +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQAPLTLP*ACSWIQ
Trigger: TTGTATCCAGCTGCAAGCTCAGGGCAGAGTCAAGGG...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTTAGGACGACATGGCCGTaGCCGGTAGTGCTAGAAACC +
Preference number: 4 (lower is better)
Translates to: AGPSNWFQLPALPMQHLFRTTWP*PVVLET
Trigger: GGTTTCTAGCACTACCGGTCACGGCCATGTCGTCCT...AAATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACAGGACGACATGGCCGTaGCCGGTAGTGCTAGAAACC +
Preference number: 4 (lower is better)
Translates to: KGQLCIPVSQVFPTQALDRTTWP*PVVLET
Trigger: GGTTTCTAGCACTACCGGTCACGGCCATGTCGTCCT...GTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCTCCTGCAGCGTCACATaGTCCTTGTCCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQASCSVT*SLSSSL
Trigger: CAAGCTGCTGGACAAGGAGCATGTGACGCTGCAGGA...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCATGTGTGCAGCAGTGCTaGCATGAGGCGGGCGCCATG +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPCVQQC*HEAGAM
Trigger: CATGGCGCCCGCCTCATGGCAGCACTGCTGCACACA...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTGGGTGTGTTTGTGTaGAGCAGTGCTGCCATGAGG +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQALGVFV*SSAAMR
Trigger: CCTCATGGCAGCACTGCTGCACACAAACACACCCAG...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCACGGTTCCCGTTCTCATaGGGAGGCTCCACCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPRFPFS*GGSTLL
Trigger: GAGCAGGGTGGAGCCTCCGCATGAGAACGGGAACCG...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAGACCGCCACGGCCAGTaGAGAAGAGACTGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPDRHGQ*RRDCWG
Trigger: ACCCCAGCAGTCTCTTCTGCACTGGCCGTGGCGGTC...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTGTCAACATGGGACGTaGTGTTCAAGTCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: AAWFSASSKGYWVAARVNCQHGT*CSSQTS
Trigger: GGAAGTTTGACTTGAACACCACGTCCCATGTTGACA...ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGCCTCCAGCACACCAATaGTGGTCAGGATCGCTTTCT +
Preference number: 4 (lower is better)
Translates to: CQLQGLLGSCKGQLCIPVPPAHQ*WSGSLS
Trigger: AGAAAGCGATCCTGACCACCATTGGTGTGCTGGAGG...CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAGCACTCGCTGCCTTCTaGTCGCCATCCTCGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPALAAF*SPSSLW
Trigger: CCACAGCGAGGATGGCGACCAGAAGGCAGCGAGTGC...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAAAGAGACTGCTGGGGTaGGTATGGCGGGGCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPKRLLG*VWRGQP
Trigger: AGGCTGGCCCCGCCATACCCACCCCAGCAGTCTCTT...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAAAGCTCCAAGGGCTATTaGGTAGCTGCAAGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKSSKGY*VAARVN
Trigger: ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCT...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTAGCAGCTTCTGGTTCTaGGCCTTACACTCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCISSFWF*ALHSCK
Trigger: CTTGCAGGAGTGTAAGGCTCAGAACCAGAAGCTGCT...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTGCGACCTTTCCAGTCCCTaGGAAAAGGAGTCCACCAAG +
Preference number: 4 (lower is better)
Translates to: PRGPCVFKAVKSCSLVQCDLSSP*EKESTK
Trigger: CTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTC...GCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTAGGCGGTCGCTGATCTaGGGCACATCACAAGTCAGA +
Preference number: 4 (lower is better)
Translates to: SWAVQLVSTASFTNAAFIRRSLI*GTSQVR
Trigger: TCTGACTTGTGATGTGCCGCAGATCAGCGACCGCCT...AATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCTGCAAGGGTCAATTATaGATTCCTGTGAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: GRRDASWAVQLVSTASFTCKGQL*IPVSQV
Trigger: AACCTGACTCACAGGAATGCATAATTGACCCTTGCA...GGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp GCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTTTGCAGCCTGGTTCAGTaGCAGCTCCAAGGGCTATTG +
Preference number: 4 (lower is better)
Translates to: AGPSNWFQLPALPMQHLFCSLVQ*QLQGLL
Trigger: CAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCA...AAATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCAGCAGCTTGTCAACATaGGACGTGGTGTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAASSLST*DVVFKS
Trigger: TGACTTGAACACCACGTCCCATGTTGACAAGCTGCT...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCTGGGCCGTCCAACTaGTTTCAACTGCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: TSLPGLEGLVFLRQSNLAAGPSN*FQLPAL
Trigger: TAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC...TGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGATGTCACAGAGAGTCTaGGAAGCATTTGACTGCCTA +
Preference number: 4 (lower is better)
Translates to: IPVSQVFPTQALDSALSLMSQRV*EAFDCL
Trigger: TAGGCAGTCAAATGCTTCTCAGACTCTCTGTGACAT...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCATCCTCCATGCACTGCTaGCTGCACAGGAAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPSSMHC*LHRKSS
Trigger: GCTGGACTTCCTGTGCAGGCAGCAGTGCATGGAGGA...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATAGCAGCTTGTCAACATaGGACGTGGTGTTCAAGTCA +
Preference number: 4 (lower is better)
Translates to: TGTSLPGLEGLVFLRQSNSSLST*DVVFKS
Trigger: TGACTTGAACACCACGTCCCATGTTGACAAGCTGCT...ATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGCTCACAGGCTGTGTTTaGATATTTGAAGCGGACCTT +
Preference number: 4 (lower is better)
Translates to: PARPRGPCVFKAVKSCSLLTGCV*IFEADL
Trigger: AAGGTCCGCTTCAAATATCCAAACACAGCCTGTGAG...CAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACACTGCCGTCCACATaGCGCCTGCTTCTGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPTLPST*RLLLSH
Trigger: GTGACTCAGAAGCAGGCGCCATGTGGACGGCAGTGT...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359139.7
CDS-3UTR CCA 90 bp AAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACAGAAGAGACGCAAGCTaGGCCGTCCAACTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: KGQLCIPVSQVFPTQALDRRDAS*AVQLVS
Trigger: TGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCT...GTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGAGCTCCAAGGGCTATTaGGTAGCTGCAAGGGTCAAT +
Preference number: 4 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQSSKGY*VAARVN
Trigger: ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCT...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCTCAAATCTTGCAGCCTaGTTCAGTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQASNLAA*FSASSK
Trigger: CTTGGAGCTGGCACTGAACCAGGCTGCAAGATTTGA...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAGCTGCTGACAGCGTATaGCCTTTCCAGTCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPAADSV*PFQSLR
Trigger: TCTCAGGGACTGGAAAGGTCATACGCTGTCAGCAGC...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGAATTATGCATTCCTGTaGGTCAGGTTTTTCCAACCC +
Preference number: 4 (lower is better)
Translates to: IPVSQVFPTQALDSALSLNYAFL*VRFFQP
Trigger: GGGTTGGAAAAACCTGACTCACAGGAATGCATAATT...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCTCATCCATTAACTCCTaGAGCGTCACATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQASSINS*SVTCSL
Trigger: CAAGGAGCATGTGACGCTGCAGGAGTTAATGGATGA...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGCCAACTGGTTTCAACTaGCAGCTTTACCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQPTGFN*QLYQCS
Trigger: GCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGG...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp ACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATGGGCTATTGGGTAGCTaGAAGGGTCAATTATGCATT +
Preference number: 4 (lower is better)
Translates to: TGTSLPGLEGLVFLRQSNGLLGS*KGQLCI
Trigger: AATGCATAATTGACCCTTGCAGCTACCCAATAGCCC...ATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TTTATTGGGAGTTGGGGGTTTGGGGTGCCCTGTCAGGTGATCAGAACATTAAAATGCCTATCTTCATCCTaGCTCGGGTGGATCAACTCC +
Preference number: 4 (lower is better)
Translates to: FIGSWGFGVPCQVIRTLKCLSSS*LGWINS
Trigger: GGAGTTGATCCACCCGAGCCAGGATGAAGATAGGCA...TTTTAATGTTCTGATCACCTGACAGGGCACCCCAAACCCCCAACTCCCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCACTTCTGGAACAGGTaGGTCACCATTGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCIHFWNR*VTIVLS
Trigger: TGACAACACAATGGTGACCCACCTGTTCCAGAAGTG...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATGAGCAGCAGAAAGGTTaGAAGTCAGTGAACTTGGCC +
Preference number: 4 (lower is better)
Translates to: KLGRPTGFNCQLYQCSIYEQQKG*KSVNLA
Trigger: GGCCAAGTTCACTGACTTCCAACCTTTCTGCTGCTC...ATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TTTATTGGGAGTTGGGGGTTTGGGGTGCCCTGTCAGGTGATCAGAACATTAAAAGCTGGGCCGTCCAACTaGTTTCAACTGCCAGCTTTA +
Preference number: 4 (lower is better)
Translates to: FIGSWGFGVPCQVIRTLKAGPSN*FQLPAL
Trigger: TAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC...TTTTAATGTTCTGATCACCTGACAGGGCACCCCAAACCCCCAACTCCCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCGGTTTTTCTTGCAATaGGATTGCCAATGGTCTTGC +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQARFFLQ*DCQWSC
Trigger: GCAAGACCATTGGCAATCTCATTGCAAGAAAAACCG...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR TCA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCATGTCACAGAGAGTCTaGGAAGCATTTGACTGCCTA +
Preference number: 4 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQAMSQRV*EAFDCL
Trigger: TAGGCAGTCAAATGCTTCTCAGACTCTCTGTGACAT...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp AAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCATCCATTAACTCCTaGAGCGTCACATGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: KGQLCIPVSQVFPTQALDSSINS*SVTCSL
Trigger: CAAGGAGCATGTGACGCTGCAGGAGTTAATGGATGA...GTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp ACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATTGCAAGGGTCAATTATaGATTCCTGTGAGTCAGGTT +
Preference number: 4 (lower is better)
Translates to: TGTSLPGLEGLVFLRQSNCKGQL*IPVSQV
Trigger: AACCTGACTCACAGGAATGCATAATTGACCCTTGCA...ATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTGCGGGCTATTGGGTAGCTaGAAGGGTCAATTATGCATT +
Preference number: 4 (lower is better)
Translates to: PRGPCVFKAVKSCSLVQCGLLGS*KGQLCI
Trigger: AATGCATAATTGACCCTTGCAGCTACCCAATAGCCC...GCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGTGTCAACATGGGACGTaGTGTTCAAGTCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQCQHGT*CSSQTS
Trigger: GGAAGTTTGACTTGAACACCACGTCCCATGTTGACA...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp AAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATCACTTCTGGAACAGGTaGGTCACCATTGTGTTGTCA +
Preference number: 4 (lower is better)
Translates to: KLGRPTGFNCQLYQCSIYHFWNR*VTIVLS
Trigger: TGACAACACAATGGTGACCCACCTGTTCCAGAAGTG...ATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp TTTATTGGGAGTTGGGGGTTTGGGGTGCCCTGTCAGGTGATCAGAACATTAAAATCAAATCTTGCAGCCTaGTTCAGTGCCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: FIGSWGFGVPCQVIRTLKSNLAA*FSASSK
Trigger: CTTGGAGCTGGCACTGAACCAGGCTGCAAGATTTGA...TTTTAATGTTCTGATCACCTGACAGGGCACCCCAAACCCCCAACTCCCAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAACGTAAAATAATCTTCTaGACCCTTCTAGGACGACAT +
Preference number: 4 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKRKIIF*TLLGRH
Trigger: ATGTCGTCCTAGAAGGGTCCAGAAGATTATTTTACG...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGCTGTTCGGTTTTTCTTaGAATGAGATTGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQLFGFS*NEIANG
Trigger: ACCATTGGCAATCTCATTGCAAGAAAAACCGAACAG...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp ACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCACGTAAAATAATCTTCTaGACCCTTCTAGGACGACAT +
Preference number: 4 (lower is better)
Translates to: TSLPGLEGLVFLRQSNLARKIIF*TLLGRH
Trigger: ATGTCGTCCTAGAAGGGTCCAGAAGATTATTTTACG...TGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp CCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCATGCATAGTTCCACTTaGAAGTGCAAAAAGTTATTC +
Preference number: 4 (lower is better)
Translates to: PGLEGLVFLRQSNLAAWFMHSST*KCKKLF
Trigger: GAATAACTTTTTGCACTTCCAAGTGGAACTATGCAT...GAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR GCA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCACTGTTCGGTTTTTCTTaGAATGAGATTGCCAATGGT +
Preference number: 4 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPLFGFS*NEIANG
Trigger: ACCATTGGCAATCTCATTGCAAGAAAAACCGAACAG...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CCA 90 bp GCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTTATGCATAGTTCCACTTaGAAGTGCAAAAAGTTATTC +
Preference number: 4 (lower is better)
Translates to: AGPSNWFQLPALPMQHLFMHSST*KCKKLF
Trigger: GAATAACTTTTTGCACTTCCAAGTGGAACTATGCAT...AAATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS CCA 90 bp TGGTGGAGGCAAAGCCCGGGCGGCCTCGGGCGGGCCGCACACACATaGGCCCGGCCGAGGGCGCAGCGCCTACGGACACCGGCACGGCCG +
Preference number: 5 (lower is better)
Translates to: WWRQSPGGLGRAAHT*ARPRAQRLRTPARP
Trigger: CGGCCGTGCCGGTGTCCGTAGGCGCTGCGCCCTCGGCCGGGCCCATGTGTGTGCGGCCCGCCCGAGGCCGCCCGGGCTTTGCCTCCACCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS CCA 90 bp CTGCCCTGCGGGCCGGGCGTCGCGGCAGCTCTTCGGAGGCCCGTGTaGAGGCCCGAGCGGAGGCCAGGGCGCTGGTGGAGGCAAAGCCCG +
Preference number: 5 (lower is better)
Translates to: LPCGPGVAAALRRPV*RPERRPGRWWRQSP
Trigger: CGGGCTTTGCCTCCACCAGCGCCCTGGCCTCCGCTCGGGCCTCCACACGGGCCTCCGAAGAGCTGCCGCGACGCCCGGCCCGCAGGGCAG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS CCA 90 bp CTTCGGAGGCCCGTGTGGAGGCCCGAGCGGAGGCCAGGGCGCTGGTaGAGGCAAAGCCCGGGCGGCCTCGGGCGGGCCGCACACACATGG +
Preference number: 5 (lower is better)
Translates to: LRRPVWRPERRPGRW*RQSPGGLGRAAHTW
Trigger: CCATGTGTGTGCGGCCCGCCCGAGGCCGCCCGGGCTTTGCCTCCACCAGCGCCCTGGCCTCCGCTCGGGCCTCCACACGGGCCTCCGAAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS CCA 90 bp GCTCTTCGGAGGCCCGTGTGGAGGCCCGAGCGGAGGCCAGGGCGCTaGTGGAGGCAAAGCCCGGGCGGCCTCGGGCGGGCCGCACACACA +
Preference number: 5 (lower is better)
Translates to: ALRRPVWRPERRPGR*WRQSPGGLGRAAHT
Trigger: TGTGTGTGCGGCCCGCCCGAGGCCGCCCGGGCTTTGCCTCCACCAGCGCCCTGGCCTCCGCTCGGGCCTCCACACGGGCCTCCGAAGAGC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS GCA 90 bp GAGGGAGGGGCACTCAGGTCAGGCGGGGGCGCGAGGAAGCTCACCTaGAGGCTGGGCCGTGACGACGGTGCAGGCAGGGCTCTAAGTGGC +
Preference number: 5 (lower is better)
Translates to: EGGALRSGGGARKLT*RLGRDDGAGRALSG
Trigger: GCCACTTAGAGCCCTGCCTGCACCGTCGTCACGGCCCAGCCTGCAGGTGAGCTTCCTCGCGCCCCCGCCTGACCTGAGTGCCCCTCCCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470046.1
CDS-3UTR CAA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCGCATCTGTCCGTCCTTaGTCACTGTCCCCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGASVRP*SLSPGW
Trigger: CCACCCTGGGGACAGTGACAAAGGACGGACAGATGC...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000359139.7
CDS-3UTR CAA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCCGGCAGAGCTCCTGGTaGATGCTGGGTGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGRQSSW*MLGVFV
Trigger: CACAAACACACCCAGCATCAACCAGGAGCTCTGCCG...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS GCA 90 bp CCGGCAGAGCTCCTGGTTGATGCTGGGTGTGTTTGTGTGCAGCAGTaGTGCCATGAGGCGGGCGCCATGCAGACGGGCATTCCCCAGGGG +
Preference number: 5 (lower is better)
Translates to: PAELLVDAGCVCVQQ*CHEAGAMQTGIPQG
Trigger: CCCCTGGGGAATGCCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS GCA 90 bp GAGTCTCCAGGCTCCGGTTCCCGTTCTCATGCGGAGGCTCCACCCTaGTCTCGGATCCGCTGGCTTCTGTCCTCTCCTCACGGGCAGCGT +
Preference number: 5 (lower is better)
Translates to: ESPGSGSRSHAEAPP*SRIRWLLSSPHGQR
Trigger: ACGCTGCCCGTGAGGAGAGGACAGAAGCCAGCGGATCCGAGAGCAGGGTGGAGCCTCCGCATGAGAACGGGAACCGGAGCCTGGAGACTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000612753.5
CDS CCA 90 bp AACAGGTGGGTCACCATTGTGTTGTCAGGGAGGCTGGCGGCCGGCTaGGGAGTCTCCAGGCTCCGGTTCCCGTTCTCATGCGGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: NRWVTIVLSGRLAAG*GVSRLRFPFSCGGS
Trigger: GGAGCCTCCGCATGAGAACGGGAACCGGAGCCTGGAGACTCCCCAGCCGGCCGCCAGCCTCCCTGACAACACAATGGTGACCCACCTGTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000612753.5
CDS GCA 90 bp CTGGGTGTGTTTGTGTGCAGCAGTGCTGCCATGAGGCGGGCGCCATaGAGACGGGCATTCCCCAGGGGCTCCTCCAGCACACCAATGGTG +
Preference number: 5 (lower is better)
Translates to: LGVFVCSSAAMRRAP*RRAFPRGSSSTPMV
Trigger: CACCATTGGTGTGCTGGAGGAGCCCCTGGGGAATGCCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCACACAAACACACCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS GCA 90 bp GCAGAGCTCCTGGTTGATGCTGGGTGTGTTTGTGTGCAGCAGTGCTaGCATGAGGCGGGCGCCATGCAGACGGGCATTCCCCAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: AELLVDAGCVCVQQC*HEAGAMQTGIPQGL
Trigger: GAGCCCCTGGGGAATGCCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CCCCGGCTCCTGCAGGCCGACCTTATTGCTGTGCTCTGGGCTTGGGGGCGGCTGAACGGGGCATTGATGTaGTCGTCCTGGTCGGCAAAC +
Preference number: 5 (lower is better)
Translates to: PRLLQADLIAVLWAWGRLNGALM*SSWSAN
Trigger: GTTTGCCGACCAGGACGACAACATCAATGCCCCGTT...CAGCCGCCCCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCAGGAGCCGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS GCA 90 bp GTGTTGAGCCGGCAGAGCTCCTGGTTGATGCTGGGTGTGTTTGTGTaGAGCAGTGCTGCCATGAGGCGGGCGCCATGCAGACGGGCATTC +
Preference number: 5 (lower is better)
Translates to: VLSRQSSWLMLGVFV*SSAAMRRAPCRRAF
Trigger: GAATGCCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGCCGGCTCAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS TCA 90 bp CGTACAGGAGGCTCAGCAGGCTCTCGTCCCCACCGAGGCGGTCGCTaGTCTGCGGCACATCACAAGTCAGAAGCTCACAGGCTGTGTTTG +
Preference number: 5 (lower is better)
Translates to: RTGGSAGSRPHRGGR*SAAHHKSEAHRLCL
Trigger: CAAACACAGCCTGTGAGCTTCTGACTTGTGATGTGCCGCAGATCAGCGACCGCCTCGGTGGGGACGAGAGCCTGCTGAGCCTCCTGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGCAGCAGTCACTTCCTTaGGCGCGGGGCAGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: NLAAWFSASSKGYWVAARQQSLP*ARGRQG
Trigger: GCCCTGCCTGCCCCGCGCCAAAGGAAGTGACTGCTG...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGTGCTGTGCTCTGGGCTaGGGGGCGGCTGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: IPVSQVFPTQALDSALSLCCALG*GAAEVP
Trigger: GGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCA...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GCCCACTCAGGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCTGCAGGCCGACCTTATaGCTGTGCTCTGGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: AHSGRRDASWAVQLVSTACRPTL*LCSGLG
Trigger: CCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCA...GGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCCTGAGTGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS CCA 90 bp GTGGTCAGGATCGCTTTCTTCTTGGGCGGGTTGAGCAGGAGCTGGTaGAAGTCCTTCAGCCGAGGCTCGATGCCGTGTAGTACGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VVRIAFFLGGLSRSW*KSFSRGSMPCSTLL
Trigger: CAGCAGCGTACTACACGGCATCGAGCCTCGGCTGAAGGACTTCCACCAGCTCCTGCTCAACCCGCCCAAGAAGAAAGCGATCCTGACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GGCAGAAGAGACGCAAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCTGGCTCCAGAGCCTCTaGCAGCTGACTGCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: GRRDASWAVQLVSTASFTWLQSL*QLTALV
Trigger: GACCAGGGCAGTCAGCTGCAAGAGGCTCTGGAGCCA...GGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTTGCGTCTCTTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCTGCAGGCCGACCTTATaGCTGTGCTCTGGGCTTGGG +
Preference number: 5 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVCRPTL*LCSGLG
Trigger: CCCAAGCCCAGAGCACAGCAATAAGGTCGGCCTGCA...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS GCA 90 bp AGGAGGCTCAGCAGGCTCTCGTCCCCACCGAGGCGGTCGCTGATCTaGGGCACATCACAAGTCAGAAGCTCACAGGCTGTGTTTGGATAT +
Preference number: 5 (lower is better)
Translates to: RRLSRLSSPPRRSLI*GTSQVRSSQAVFGY
Trigger: ATATCCAAACACAGCCTGTGAGCTTCTGACTTGTGATGTGCCGCAGATCAGCGACCGCCTCGGTGGGGACGAGAGCCTGCTGAGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GCTGTGCTCTGGGCTTGGGGGCGGCTGAGGTGCCCCTCTGTCCTCCAGCAGGGCTTTCTTGCAATGAGATaGCCAATGGTCTTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: AVLWAWGRLRCPSVLQQGFLAMR*PMVLLK
Trigger: TTTCAGCAAGACCATTGGCAATCTCATTGCAAGAAA...GCCCTGCTGGAGGACAGAGGGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp TGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGGGCTTTCTCAGGGCCTaGGCTCCGGCTGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: CQLQGLLGSCKGQLCIPVGFLRA*APAALS
Trigger: GCTGAGGGCAGCCGGAGCCAAGGCCCTGAGAAAGCC...CACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS TCA 90 bp CCGTGTAGTACGCTGCTGCTGACAGCGTATGACCTTTCCAGTCCCTaGGAAAAGGAGTCCACCAAGCCCTCTGTCCCAACCCGCCTGGTT +
Preference number: 5 (lower is better)
Translates to: PCSTLLLTAYDLSSP*EKESTKPSVPTRLV
Trigger: AACCAGGCGGGTTGGGACAGAGGGCTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCATACGCTGTCAGCAGCAGCGTACTACACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAGGATCGCTTTCTTCTaGGGCGGGTTGAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GTGTSLPGLEGLVFLRQSRIAFF*GGLSRS
Trigger: GCTCCTGCTCAACCCGCCCAAGAAGAAAGCGATCCT...TGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATTCTGCACCACCGCGTaGGCGATCCGTGTGAGGTGG +
Preference number: 5 (lower is better)
Translates to: HRDIPARPRGPCVFKAVKFCTTA*AIRVRW
Trigger: CCACCTCACACGGATCGCCAACGCGGTGGTGCAGAA...TTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCCTGTCAAACGGGGCATaGATGTTGTCGTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVLSNGA*MLSSWS
Trigger: CGACCAGGACGACAACATCAATGCCCCGTTTGACAG...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGGCTTTCTCAGGGCCTaGGCTCCGGCTGCCCTCAGC +
Preference number: 5 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQGFLRA*APAALS
Trigger: GCTGAGGGCAGCCGGAGCCAAGGCCCTGAGAAAGCC...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGCAGCAGTCACTTCCTTaGGCGCGGGGCAGGCAGGGC +
Preference number: 5 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQQQSLP*ARGRQG
Trigger: GCCCTGCCTGCCCCGCGCCAAAGGAAGTGACTGCTG...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTTGCTGTGCTCTGGGCTaGGGGGCGGCTGAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: SWAVQLVSTASFTNAAFICCALG*GAAEVP
Trigger: GGGCACCTCAGCCGCCCCCAAGCCCAGAGCACAGCA...AATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS TCA 90 bp GGAAGTCCTTCAGCCGAGGCTCGATGCCGTGTAGTACGCTGCTGCTaGCAGCGTATGACCTTTCCAGTCCCTGAGAAAAGGAGTCCACCA +
Preference number: 5 (lower is better)
Translates to: GSPSAEARCRVVRCC*QRMTFPVPEKRSPP
Trigger: TGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCATACGCTGTCAGCAGCAGCGTACTACACGGCATCGAGCCTCGGCTGAAGGACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS CCA 90 bp CTGCTCTCGGATCCGCTGGCTTCTGTCCTCTCCTCACGGGCAGCGTaGGAGAGAATAGCGGCTATGCATAGTTCCACTTGGAAGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LLSDPLASVLSSRAA*ERIAAMHSSTWKCK
Trigger: TTTGCACTTCCAAGTGGAACTATGCATAGCCGCTATTCTCTCCCACGCTGCCCGTGAGGAGAGGACAGAAGCCAGCGGATCCGAGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000612753.5
CDS CCA 90 bp AACAAGTCCAGCAGTAAGTCCATCGTGTTGAGCCGGCAGAGCTCCTaGTTGATGCTGGGTGTGTTTGTGTGCAGCAGTGCTGCCATGAGG +
Preference number: 5 (lower is better)
Translates to: NKSSSKSIVLSRQSS*LMLGVFVCSSAAMR
Trigger: CCTCATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGCCGGCTCAACACGATGGACTTACTGCTGGACTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCTGGCGAGCAGAGGATaGAGAGGCGGCTCATGGTCC +
Preference number: 5 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCILASRG*RGGSWS
Trigger: GGACCATGAGCCGCCTCTCAATCCTCTGCTCGCCAG...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp TCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCAGGATCGCTTTCTTCTaGGGCGGGTTGAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: SLPGLEGLVFLRQSNLAARIAFF*GGLSRS
Trigger: GCTCCTGCTCAACCCGCCCAAGAAGAAAGCGATCCT...GGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp ATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCCTTGACTCTGCCCTGAGCTTGCGGCAGAGCTCCTGGTaGATGCTGGGTGTGTTTGTG +
Preference number: 5 (lower is better)
Translates to: IPVSQVFPTQALDSALSLRQSSW*MLGVFV
Trigger: CACAAACACACCCAGCATCAACCAGGAGCTCTGCCG...CAAGCTCAGGGCAGAGTCAAGGGCCTGGGTTGGAAAAACCTGACTCACAGGAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATGCTGTGTTTGGATATTaGAAGCGGACCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AAWFSASSKGYWVAARVNAVFGY*KRTFSS
Trigger: GGAGGAGAAGGTCCGCTTCAAATATCCAAACACAGC...ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATTGGCTCCAGAGCCTCTaGCAGCTGACTGCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: KLGRPTGFNCQLYQCSIYWLQSL*QLTALV
Trigger: GACCAGGGCAGTCAGCTGCAAGAGGCTCTGGAGCCA...ATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AATCTTGCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGGAGCAGCAGAAAGGTaGGAAGTCAGTGAACTTGGC +
Preference number: 5 (lower is better)
Translates to: NLAAWFSASSKGYWVAARGAAER*EVSELG
Trigger: GCCAAGTTCACTGACTTCCAACCTTTCTGCTGCTCC...CCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGCAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGACGTCACGGCTTTTATaGGGAGTTGGGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PARPRGPCVFKAVKSCSLTSRLL*GVGGLG
Trigger: CCCCAAACCCCCAACTCCCAATAAAAGCCGTGACGT...CAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCACAGGTGGGTCACCATaGTGTTGTCAGGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQATGGSP*CCQGGW
Trigger: CCAGCCTCCCTGACAACACAATGGTGACCCACCTGT...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCAGTGCACAGGTGGGTCACCATaGTGTTGTCAGGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PRGPCVFKAVKSCSLVQCTGGSP*CCQGGW
Trigger: CCAGCCTCCCTGACAACACAATGGTGACCCACCTGT...GCACTGAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp ACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTGTCAAACGGGGCATaGATGTTGTCGTCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: TGTSLPGLEGLVFLRQSNLSNGA*MLSSWS
Trigger: CGACCAGGACGACAACATCAATGCCCCGTTTGACAG...ATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp ACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCAGCTCCAAGGGCTATaGGGTAGCTGCAAGGGTCAA +
Preference number: 5 (lower is better)
Translates to: TGTSLPGLEGLVFLRQSNQLQGL*GSCKGQ
Trigger: TTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTG...ATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCACGTCACGGCTTTTATaGGGAGTTGGGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: PGLEGLVFLRQSNLAAWFTSRLL*GVGGLG
Trigger: CCCCAAACCCCCAACTCCCAATAAAAGCCGTGACGT...GAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GGGCACAGGGACATCCCTGCCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCACCAGGCTGATGAACTaGTCCTTCTTCTTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: GHRDIPARPRGPCVFKAVTRLMN*SFFFKN
Trigger: GTTTTTGAAGAAGAAGGACAAGTTCATCAGCCTGGT...GACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGGCAGGGATGTCCCTGTGCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCGACTCTGCCCTGAGCTaGCAGCTGGATACAAAGTGC +
Preference number: 5 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQADSALS*QLDTKC
Trigger: GCACTTTGTATCCAGCTGCAAGCTCAGGGCAGAGTC...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCAGCGTCACATGCTCCTaGTCCAGCAGCTTGTCAACA +
Preference number: 5 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQASVTCS*SSSLST
Trigger: TGTTGACAAGCTGCTGGACAAGGAGCATGTGACGCT...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AAGCTGGGCCGTCCAACTGGTTTCAACTGCCAGCTTTACCAATGCAGCATTTATGACTCTGCCCTGAGCTaGCAGCTGGATACAAAGTGC +
Preference number: 5 (lower is better)
Translates to: KLGRPTGFNCQLYQCSIYDSALS*QLDTKC
Trigger: GCACTTTGTATCCAGCTGCAAGCTCAGGGCAGAGTC...ATAAATGCTGCATTGGTAAAGCTGGCAGTTGAAACCAGTTGGACGGCCCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp AGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAACCCAGGCCGCTGTGTTTGGATATTaGAAGCGGACCTTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SCKGQLCIPVSQVFPTQAAVFGY*KRTFSS
Trigger: GGAGGAGAAGGTCCGCTTCAAATATCCAAACACAGC...GGCCTGGGTTGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GCAGCCTGGTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTTTCTTGCAATGAGATaGCCAATGGTCTTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: AAWFSASSKGYWVAARVNFLAMR*PMVLLK
Trigger: TTTCAGCAAGACCATTGGCAATCTCATTGCAAGAAA...ATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAACCAGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp TTTATTGGGAGTTGGGGGTTTGGGGTGCCCTGTCAGGTGATCAGAACATTAAAAAACGGGGCATTGATGTaGTCGTCCTGGTCGGCAAAC +
Preference number: 5 (lower is better)
Translates to: FIGSWGFGVPCQVIRTLKNGALM*SSWSAN
Trigger: GTTTGCCGACCAGGACGACAACATCAATGCCCCGTT...TTTTAATGTTCTGATCACCTGACAGGGCACCCCAAACCCCCAACTCCCAATAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp TTTATTGGGAGTTGGGGGTTTGGGGTGCCCTGTCAGGTGATCAGAACATTAAAAGGAGCAGCAGAAAGGTaGGAAGTCAGTGAACTTGGC +
Preference number: 5 (lower is better)
Translates to: FIGSWGFGVPCQVIRTLKGAAER*EVSELG
Trigger: GCCAAGTTCACTGACTTCCAACCTTTCTGCTGCTCC...TTTTAATGTTCTGATCACCTGACAGGGCACCCCAAACCCCCAACTCCCAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGTTTTTCCAAGCGTCACATGCTCCTaGTCCAGCAGCTTGTCAACA +
Preference number: 5 (lower is better)
Translates to: LLGSCKGQLCIPVSQVFPSVTCS*SSSLST
Trigger: TGTTGACAAGCTGCTGGACAAGGAGCATGTGACGCT...TGGAAAAACCTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CCAGGCCTAGAGGGCCTTGTGTTTTTAAGGCAGTCAAATCTTGCAGCCTGGTTCACCAGGCTGATGAACTaGTCCTTCTTCTTCAAAAAC +
Preference number: 5 (lower is better)
Translates to: PGLEGLVFLRQSNLAAWFTRLMN*SFFFKN
Trigger: GTTTTTGAAGAAGAAGGACAAGTTCATCAGCCTGGT...GAACCAGGCTGCAAGATTTGACTGCCTTAAAAACACAAGGCCCTCTAGGCCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp GTTCAGTGCCAGCTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTGAGTCTGAGAAGCATTaGACTGCCTATCTTCATCCT +
Preference number: 5 (lower is better)
Translates to: VQCQLQGLLGSCKGQLCIESEKH*TAYLHP
Trigger: AGGATGAAGATAGGCAGTCAAATGCTTCTCAGACTC...AATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAGCTGGCACTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS-3UTR CAA 90 bp CTCCAAGGGCTATTGGGTAGCTGCAAGGGTCAATTATGCATTCCTGTGAGTCAGGAGTCTGAGAAGCATTaGACTGCCTATCTTCATCCT +
Preference number: 5 (lower is better)
Translates to: LQGLLGSCKGQLCIPVSQESEKH*TAYLHP
Trigger: AGGATGAAGATAGGCAGTCAAATGCTTCTCAGACTC...CTGACTCACAGGAATGCATAATTGACCCTTGCAGCTACCCAATAGCCCTTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359139.7
ENST00000612753.5
CDS TCA 90 bp ATATCCGTCAGACAGAAGGTAGACTGCAACAGAATGTTGCCCATATaGTCATATAGTTCCATGAAAGCGCCCTTCTGTGGAAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: ISVRQKVDCNRMLPI*SYSSMKAPFCGNLL
Trigger: CAAGAGATTTCCACAGAAGGGCGCTTTCATGGAACTATATGATCATATGGGCAACATTCTGTTGCAGTCTACCTTCTGTCTGACGGATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216061.9
CDS CCA 72 bp GGGCCGGGCGTCGCGGCAGCTCTTCGGAGGCCCGTGTaGAGGCCCGAGCGGAGGCCAGGGCGCTGGTGGAGG +
Preference number: 6 (lower is better)
Translates to: GPGVAAALRRPV*RPERRPGRWWR
Trigger: CCTCCACCAGCGCCCTGGCCTCCGCTCGGGCCTCCACACGGGCCTCCGAAGAGCTGCCGCGACGCCCGGCCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS GCA 72 bp GCACTCAGGTCAGGCGGGGGCGCGAGGAAGCTCACCTaGAGGCTGGGCCGTGACGACGGTGCAGGCAGGGCT +
Preference number: 6 (lower is better)
Translates to: ALRSGGGARKLT*RLGRDDGAGRA
Trigger: AGCCCTGCCTGCACCGTCGTCACGGCCCAGCCTGCAGGTGAGCTTCCTCGCGCCCCCGCCTGACCTGAGTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470046.1
CDS CCA 72 bp GGACCGCCACGGCCAGTGCAGAAGAGACTGCTGGGGTaGGTATGGCGGGGCCAGCCTTGCTCAGTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: GPPRPVQKRLLG*VWRGQPCSVLW
Trigger: CCACAGCACTGAGCAAGGCTGGCCCCGCCATACCCACCCCAGCAGTCTCTTCTGCACTGGCCGTGGCGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000470046.1
ENST00000612753.5
CDS CCA 72 bp CCGGCTGTCAGCACACCCGACCCTGTGTGGCAAACATaGACTCCGGTTACGGGCACCCCCACCCTCAGTGCC +
Preference number: 6 (lower is better)
Translates to: PAVSTPDPVWQT*TPVTGTPTLSA
Trigger: GGCACTGAGGGTGGGGGTGCCCGTAACCGGAGTCCATGTTTGCCACACAGGGTCGGGTGTGCTGACAGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000470046.1
CDS GCA 72 bp GGCTCCGGTTCCCGTTCTCATGCGGAGGCTCCACCCTaGTCTCGGATCCGCTGGCTTCTGTCCTCTCCTCAC +
Preference number: 6 (lower is better)
Translates to: GSGSRSHAEAPP*SRIRWLLSSPH
Trigger: GTGAGGAGAGGACAGAAGCCAGCGGATCCGAGAGCAGGGTGGAGCCTCCGCATGAGAACGGGAACCGGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000612753.5
CDS GCA 72 bp AACATGGACTCCGGTTACGGGCACCCCCACCCTCAGTaGCACCCCGCCTCATGCCCAAGGACCAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: NMDSGYGHPHPQ*HPASCPRTSWT
Trigger: TGTCCAGCTGGTCCTTGGGCATGAGGCGGGGTGGCACTGAGGGTGGGGGTGCCCGTAACCGGAGTCCATGTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470046.1
CDS CCA 72 bp TCTCATGCGGAGGCTCCACCCTGCTCTCGGATCCGCTaGCTTCTGTCCTCTCCTCACGGGCAGCGTGGGAGA +
Preference number: 6 (lower is better)
Translates to: SHAEAPPCSRIR*LLSSPHGQRGR
Trigger: TCTCCCACGCTGCCCGTGAGGAGAGGACAGAAGCCAGCGGATCCGAGAGCAGGGTGGAGCCTCCGCATGAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000612753.5
CDS CCA 72 bp CCTCAGTGCCACCCCGCCTCATGCCCAAGGACCAGCTaGACAAAAAGGTCCAGGCGGCCTGGGAGCACCATC +
Preference number: 6 (lower is better)
Translates to: PQCHPASCPRTS*TKRSRRPGSTI
Trigger: GATGGTGCTCCCAGGCCGCCTGGACCTTTTTGTCCAGCTGGTCCTTGGGCATGAGGCGGGGTGGCACTGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000470046.1
CDS TCA 72 bp GGCTCAGCAGGCTCTCGTCCCCACCGAGGCGGTCGCTaGTCTGCGGCACATCACAAGTCAGAAGCTCACAGG +
Preference number: 6 (lower is better)
Translates to: GSAGSRPHRGGR*SAAHHKSEAHR
Trigger: CCTGTGAGCTTCTGACTTGTGATGTGCCGCAGATCAGCGACCGCCTCGGTGGGGACGAGAGCCTGCTGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS CCA 72 bp TCTCGATTAAGGAGGCAGCCTGACCAGGGTGGGCCGTaGCCGGGCGGCAGCAGCATCACACTGGGCCATTTA +
Preference number: 6 (lower is better)
Translates to: SRLRRQPDQGGP*PGGSSITLGHL
Trigger: TAAATGGCCCAGTGTGATGCTGCTGCCGCCCGGCCACGGCCCACCCTGGTCAGGCTGCCTCCTTAATCGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000470046.1
ENST00000612753.5
CDS CAA 72 bp AGGCAGCACTTCTGGAACAGGTGGGTCACCATTGTGTaGTCAGGGAGGCTGGCGGCCGGCTGGGGAGTCTCC +
Preference number: 6 (lower is better)
Translates to: RQHFWNRWVTIV*SGRLAAGWGVS
Trigger: GGAGACTCCCCAGCCGGCCGCCAGCCTCCCTGACAACACAATGGTGACCCACCTGTTCCAGAAGTGCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000612753.5
CDS GCA 72 bp AGCAGGCTCTCGTCCCCACCGAGGCGGTCGCTGATCTaGGGCACATCACAAGTCAGAAGCTCACAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: SRLSSPPRRSLI*GTSQVRSSQAV
Trigger: CACAGCCTGTGAGCTTCTGACTTGTGATGTGCCGCAGATCAGCGACCGCCTCGGTGGGGACGAGAGCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS GCA 72 bp CTGGTTGATGCTGGGTGTGTTTGTGTGCAGCAGTGCTaGCATGAGGCGGGCGCCATGCAGACGGGCATTCCC +
Preference number: 6 (lower is better)
Translates to: LVDAGCVCVQQC*HEAGAMQTGIP
Trigger: GGGAATGCCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS GCA 72 bp CGGCAGAGCTCCTGGTTGATGCTGGGTGTGTTTGTGTaGAGCAGTGCTGCCATGAGGCGGGCGCCATGCAGA +
Preference number: 6 (lower is better)
Translates to: RQSSWLMLGVFV*SSAAMRRAPCR
Trigger: TCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS GCA 72 bp CTCCTGGTTGATGCTGGGTGTGTTTGTGTGCAGCAGTaGTGCCATGAGGCGGGCGCCATGCAGACGGGCATT +
Preference number: 6 (lower is better)
Translates to: LLVDAGCVCVQQ*CHEAGAMQTGI
Trigger: AATGCCCGTCTGCATGGCGCCCGCCTCATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS CCA 72 bp AGGATCGCTTTCTTCTTGGGCGGGTTGAGCAGGAGCTaGTGGAAGTCCTTCAGCCGAGGCTCGATGCCGTGT +
Preference number: 6 (lower is better)
Translates to: RIAFFLGGLSRS*WKSFSRGSMPC
Trigger: ACACGGCATCGAGCCTCGGCTGAAGGACTTCCACCAGCTCCTGCTCAACCCGCCCAAGAAGAAAGCGATCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS CAA 90 bp AAGTCCAGCAGTAAGTCCATCGTGTTGAGCCGGCAGAGCTCCTGGTaGATGCTGGGTGTGTTTGTGTGCAGCAGTGCTGCCATGAGGCGG +
Preference number: 6 (lower is better)
Translates to: KSSSKSIVLSRQSSW*MLGVFVCSSAAMRR
Trigger: CCGCCTCATGGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGCCGGCTCAACACGATGGACTTACTGCTGGACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS CCA 72 bp GATCCGCTGGCTTCTGTCCTCTCCTCACGGGCAGCGTaGGAGAGAATAGCGGCTATGCATAGTTCCACTTGG +
Preference number: 6 (lower is better)
Translates to: DPLASVLSSRAA*ERIAAMHSSTW
Trigger: CCAAGTGGAACTATGCATAGCCGCTATTCTCTCCCACGCTGCCCGTGAGGAGAGGACAGAAGCCAGCGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000427222.2
ENST00000612753.5
CDS TCA 72 bp ACGCTGCTGCTGACAGCGTATGACCTTTCCAGTCCCTaGGAAAAGGAGTCCACCAAGCCCTCTGTCCCAACC +
Preference number: 6 (lower is better)
Translates to: TLLLTAYDLSSP*EKESTKPSVPT
Trigger: GGTTGGGACAGAGGGCTTGGTGGACTCCTTTTCTCAGGGACTGGAAAGGTCATACGCTGTCAGCAGCAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS TCA 72 bp TCAGCCGAGGCTCGATGCCGTGTAGTACGCTGCTGCTaGCAGCGTATGACCTTTCCAGTCCCTGAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SAEARCRVVRCC*QRMTFPVPEKR
Trigger: CCTTTTCTCAGGGACTGGAAAGGTCATACGCTGTCAGCAGCAGCGTACTACACGGCATCGAGCCTCGGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS GCA 72 bp TCCGTCCGGTCTCCATCAAACATGTTCTTCAGAAGCTaGTCCACACAGTCCTGCGACTCCAGCGCTGTGAGG +
Preference number: 6 (lower is better)
Translates to: SVRSPSNMFFRS*STQSCDSSAVR
Trigger: CCTCACAGCGCTGGAGTCGCAGGACTGTGTGGAGCAGCTTCTGAAGAACATGTTTGATGGAGACCGGACGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395744.7
ENST00000612753.5
CDS CAA 72 bp AGTAAGTCCATCGTGTTGAGCCGGCAGAGCTCCTGGTaGATGCTGGGTGTGTTTGTGTGCAGCAGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: SKSIVLSRQSSW*MLGVFVCSSAA
Trigger: GGCAGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGCCGGCTCAACACGATGGACTTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS GCA 72 bp CGCAGCAGCAGGTCCATAAGCGCTGAGGTGCCGATGTaGTTCAACACCAGGCTGATGAACTTGTCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RSSRSISAEVPM*FNTRLMNLSFF
Trigger: GAAGAAGGACAAGTTCATCAGCCTGGTGTTGAAGCACATCGGCACCTCAGCGCTTATGGACCTGCTGCTGCG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS CCA 72 bp AGCAGTAAGTCCATCGTGTTGAGCCGGCAGAGCTCCTaGTTGATGCTGGGTGTGTTTGTGTGCAGCAGTGCT +
Preference number: 6 (lower is better)
Translates to: SSKSIVLSRQSS*LMLGVFVCSSA
Trigger: AGCACTGCTGCACACAAACACACCCAGCATCAACCAGGAGCTCTGCCGGCTCAACACGATGGACTTACTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000401672.7
ENST00000612753.5
CDS TCA 72 bp GGGACGTGGTGTTCAAGTCAAACTTCCAGAACATCGTaGCGGCCGCAGAGTTGGATGACACACAATCCAGGG +
Preference number: 6 (lower is better)
Translates to: GTWCSSQTSRTS*RPQSWMTHNPG
Trigger: CCCTGGATTGTGTGTCATCCAACTCTGCGGCCGTCACGATGTTCTGGAAGTTTGACTTGAACACCACGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216061.9
CDS CCA 72 bp GAAGCATTTGACTGCCTATCTTCATCCTGGCTCGGGTaGATCAACTCCACAAGCCTCTGGATGACCTTCTCT +
Preference number: 6 (lower is better)
Translates to: EAFDCLSSSWLG*INSTSLWMTFS
Trigger: AGAGAAGGTCATCCAGAGGCTTGTGGAGTTGATCCACCCGAGCCAGGATGAAGATAGGCAGTCAAATGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS TCA 72 bp TGGTCTCTGCCCAGCCTAACTATGTCACAGAGAGTCTaGGAAGCATTTGACTGCCTATCTTCATCCTGGCTC +
Preference number: 6 (lower is better)
Translates to: WSLPSLTMSQRV*EAFDCLSSSWL
Trigger: GAGCCAGGATGAAGATAGGCAGTCAAATGCTTCTCAGACTCTCTGTGACATAGTTAGGCTGGGCAGAGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS CCA 72 bp CAGAACTTGCAAGATAGGGCAGTTACAGGTGACTTCTaGACGGTCCTGTTTCTAGCCACAGAGAAGGTGGAA +
Preference number: 6 (lower is better)
Translates to: QNLQDRAVTGDF*TVLFLATEKVE
Trigger: TTCCACCTTCTCTGTGGCTAGAAACAGGACCGTCCAGAAGTCACCTGTAACTGCCCTATCTTGCAAGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216061.9
CDS CAA 72 bp GAGGTGCCGATGTGCTTCAACACCAGGCTGATGAACTaGTCCTTCTTCTTCAAAAACGTAATCACCTGTTCG +
Preference number: 6 (lower is better)
Translates to: EVPMCFNTRLMN*SFFFKNVITCS
Trigger: CGAACAGGTGATTACGTTTTTGAAGAAGAAGGACAAGTTCATCAGCCTGGTGTTGAAGCACATCGGCACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS CAA 90 bp ATAAGCGCTGAGGTGCCGATGTGCTTCAACACCAGGCTGATGAACTaGTCCTTCTTCTTCAAAAACGTAATCACCTGTTCGGTTTTTCTT +
Preference number: 6 (lower is better)
Translates to: ISAEVPMCFNTRLMN*SFFFKNVITCSVFL
Trigger: AAGAAAAACCGAACAGGTGATTACGTTTTTGAAGAAGAAGGACAAGTTCATCAGCCTGGTGTTGAAGCACATCGGCACCTCAGCGCTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000216061.9
ENST00000359139.7
ENST00000395741.7
ENST00000395744.7
ENST00000612753.5
CDS TCA 72 bp AGACAGAAGGTAGACTGCAACAGAATGTTGCCCATATaGTCATATAGTTCCATGAAAGCGCCCTTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: RQKVDCNRMLPI*SYSSMKAPFCG
Trigger: TCCACAGAAGGGCGCTTTCATGGAACTATATGATCATATGGGCAACATTCTGTTGCAGTCTACCTTCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000216061.9