RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP6R1 (Homo sapiens)

Ensembl gene IDs: ENSG00000105063

Ensembl transcript IDs: ENST00000412770.7, ENST00000586690.1, ENST00000587283.5, ENST00000587457.1, ENST00000589343.1, ENST00000591323.5, ENST00000591602.1, ENST00000592242.1

Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTaGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGTG +
Preference number: 1 (lower is better)
Translates to: RWAVPHGGPELKGRV*AWPSALQRGTAGHV
Trigger: CACGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR CCA 90 bp TGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGTaGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACG +
Preference number: 1 (lower is better)
Translates to: CGRGRLRCSVGQLGT*VATLGPLTPAPAGT
Trigger: CGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR CCA 90 bp GGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTaGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGT +
Preference number: 1 (lower is better)
Translates to: GHVGGNLGTPNTSSR*DGTGKAVLWSRQPS
Trigger: ACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR CCA 90 bp CCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTaGAGCCGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTC +
Preference number: 1 (lower is better)
Translates to: PNTSSRWDGTGKAVL*SRQPSSVSSLSLAL
Trigger: GAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR CCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGGGAGGACGGAAGATTTaGCCGCCGCTGCCGCACCAG +
Preference number: 2 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTGGRKI*PPLPHQ
Trigger: CTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCC...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR GCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTTCGTGGGACCCGCCCTaGCCCCACCCCGGGAGATCC +
Preference number: 2 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGSWDPP*PHPGRS
Trigger: GGATCTCCCGGGGTGGGGGCAGGGCGGGTCCCACGA...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR CCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCAATGGGGGCCATCGTaGGACCCGCCCTGCCCCCAC +
Preference number: 2 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDQWGPS*DPPCPH
Trigger: GTGGGGGCAGGGCGGGTCCCACGATGGCCCCCATTG...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR CCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCACCCCCACCCACGCTaGGCCGTCCCCCATGGTGGA +
Preference number: 2 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDHPHPR*AVPHGG
Trigger: TCCACCATGGGGGACGGCCCAGCGTGGGTGGGGGTG...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCAAATGGGGGTGGGTTaGGCCTGTCTCCCTGGCACC +
Preference number: 2 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSQMGVG*ACLPGT
Trigger: GGTGCCAGGGAGACAGGCCCAACCCACCCCCATTTG...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCAGTGCAAATGGGGGTaGGTTGGGCCTGTCTCCCTG +
Preference number: 2 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSQCKWG*VGPVSL
Trigger: CAGGGAGACAGGCCCAACCCACCCCCATTTGCACTG...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR GCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACAACTTCTCTTCTCAGTaGAAATGGGGGTGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHNFSSQ*KWGWVG
Trigger: CCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTT...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR CCA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATATTGGGCCTGTCTCCCTaGCACCAGCCTCCTGGGGGT +
Preference number: 2 (lower is better)
Translates to: RQPSSVSSLSLALLPLSILGLSP*HQPPGG
Trigger: ACCCCCAGGAGGCTGGTGCCAGGGAGACAGGCCCAA...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR CCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTTCTTCTCAGTGCAAATaGGGGTGGGTTGGGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPSSQCK*GWVGPV
Trigger: GACAGGCCCAACCCACCCCCATTTGCACTGAGAAGA...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR CCA 72 bp CATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTaGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCAC +
Preference number: 3 (lower is better)
Translates to: HGGPELKGRVWA*PSALQRGTAGH
Trigger: GTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR CCA 72 bp GTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTaGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCT +
Preference number: 3 (lower is better)
Translates to: VPHGGPELKGRV*AWPSALQRGTA
Trigger: AGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR-3UTR CAA 90 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGGGAGGACGGAAGATTaGGCCGCCGCTGCCGCACCA +
Preference number: 3 (lower is better)
Translates to: GGNLGTPNTSSRWDGTGKGRTED*AAAAAP
Trigger: TGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCC...CTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR CCA 72 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTaGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGC +
Preference number: 3 (lower is better)
Translates to: GGNLGTPNTSSR*DGTGKAVLWSR
Trigger: GCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR CCA 72 bp ACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTaGGTTGGGCCTGTCTCCCTGGCACCAGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: TLQNFSSQCKWG*VGPVSLAPASW
Trigger: CCAGGAGGCTGGTGCCAGGGAGACAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
3UTR CCA 72 bp GAGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATaGGGGTGGGTTGGGCCTGTCTCCCTGGCACCAGCC +
Preference number: 3 (lower is better)
Translates to: EATLQNFSSQCK*GWVGPVSLAPA
Trigger: GGCTGGTGCCAGGGAGACAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGTCGTGGGACCCGCCCTaGCCCCACCCCGGGAGATCC +
Preference number: 4 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTSWDPP*PHPGRS
Trigger: GGATCTCCCGGGGTGGGGGCAGGGCGGGTCCCACGA...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGTCGCGCGCCGGGTCCTaGAGAGTTGAGGGGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTSRAGS*RVEGVS
Trigger: GCTGACCCCCTCAACTCTGCAGGACCCGGCGCGCGA...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGGGTAGGACAGAGGGGTaGCCCCTCCACGGGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTGRTEG*PLHGLH
Trigger: GTGCAGCCCGTGGAGGGGCCACCCCTCTGTCCTACC...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGGTCTGCGCTGCAGCGTaGGACAGCTGGGCACGTGGG +
Preference number: 4 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTVCAAA*DSWARG
Trigger: CCCACGTGCCCAGCTGTCCCACGCTGCAGCGCAGAC...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAGGGGGTGTGGGGTCCTaGGACCTGAGCTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQAGGVGS*DLSCRA
Trigger: CGCCCTGCAGCTCAGGTCTCAGGACCCCACACCCCC...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCTTGGGAGCCTGGGGATaGAGGCCCTTCCGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AGSGQRHGPHSGPSGTPTLGAWG*RPFRGR
Trigger: TCTGCCCCGGAAGGGCCTGCATCCCCAGGCTCCCAA...GGTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGTCCATCAGACTCCCCTaGGCCCTGGGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTSIRLP*ALGLFL
Trigger: GAGGAAGAGGCCCAGGGCTCAGGGGAGTCTGATGGA...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACGCCAGCTGGCTGCCCTaGCAGGCGCCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHASWLP*QAPSSP
Trigger: TGGAGAAGATGGCGCCTGGCAGGGCAGCCAGCTGGC...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGGGCCCCTCCACGGGCTaGACAGCCAATGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWGPSTG*TANALL
Trigger: GAGGAGGGCATTGGCTGTGCAGCCCGTGGAGGGGCC...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGCACGGGCAGGAGGGCTaGCCAGGCTCTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWHGQEG*PGSEWG
Trigger: TCCCCACTCAGAGCCTGGCCAGCCCTCCTGCCCGTG...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACGGAGGACGGAAGATTTaGCCGCCGCTGCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHGGRKI*PPLPHQ
Trigger: CTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCC...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACGGCCGGGTGTGGGCGTaGCCGTCTGCGCTGCAGCGT +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDGRVWA*PSALQR
Trigger: ACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCC...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCTAAAAGGCCGGGTGTaGGCGTGGCCGTCTGCGCTG +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHLKGRV*AWPSAL
Trigger: CAGCGCAGACGGCCACGCCCACACCCGGCCTTTTAG...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp GCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCGCAGCAGGAGGTCCATaGTGGCCGAGGTGCCAATGT +
Preference number: 4 (lower is better)
Translates to: AGSGQRHGPHSGPSGTPTAAGGP*WPRCQC
Trigger: ACATTGGCACCTCGGCCATCATGGACCTCCTGCTGC...GGTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCACACTGGCCAGGAGCTTaGCCACGTGCAGCCGCGTGT +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQAHWPGA*PRAAAC
Trigger: ACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTG...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACGCCGAGGTGCCAATGTaGTGCAGCAGCAGGTCCACG +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHAEVPM*CSSRST
Trigger: CGTGGACCTGCTGCTGCAGCACATTGGCACCTCGGC...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCGGGCGTAGGGCGTaGAAGGCGCCCACACTGGAC +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSRGRRA*KAPTLD
Trigger: GTCCAGTGTGGGCGCCTTGCACGCCCTACGCCCGCG...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCTCGTGCGTCAGGGCTaGATCATTGGCGCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHLVRQG*IIGAQG
Trigger: GCCCTGAGCGCCAATGATGCAGCCCTGACGCACGAG...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAGCTTCCCACTGCTCCTaGTGCTCGCTGGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQAASHCS*CSLGSS
Trigger: GGAGCTGCCCAGCGAGCAGCAGGAGCAGTGGGAAGC...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCTCCATGAAGGCCTGCTaGAGCACAGCCTCCTCAGGG +
Preference number: 4 (lower is better)
Translates to: AGSGQRHGPHSGPSGTPTSMKAC*STASSG
Trigger: CCCTGAGGAGGCTGTGCTGCAGCAGGCCTTCATGGA...GGTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGTGGCCGTCTGCGCTaGAGCGTGGGACAGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSRGRLR*SVGQLG
Trigger: GCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACG...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTGGGCGTGGCCGTCTaGGCTGCAGCGTGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PLGRNREGCALEPPAQFGVGVAV*AAAWDS
Trigger: GCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCAC...ACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACAGGGTGGCCAGCAGTTaGTCAGGCTCTGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHRVASS*SGSGLS
Trigger: GGACAGCCCAGAGCCTGACCAACTGCTGGCCACCCT...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAGGCTCCAGCAGGAGCTaGTGGAAGCAGCTGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQAGSSRS*WKQLSR
Trigger: GCGGCTCAGCTGCTTCCACCAGCTCCTGCTGGAGCC...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCACTCCGGACACCAGGTaGCTGGCCCAGACGGGCCCC +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSTPDTR*LAQTGP
Trigger: GGGGCCCGTCTGGGCCAGCCACCTGGTGTCCGGAGT...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCCACTCGGGACCCTCTaGCACCCCCACCCACGCTGG +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSPLGTL*HPHPRW
Trigger: CCAGCGTGGGTGGGGGTGCCAGAGGGTCCCGAGTGG...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGTGGGGTCCTGAGACCTaGGCTGCAGGGCGTCACGGG +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSWGPET*AAGRHG
Trigger: CCCGTGACGCCCTGCAGCTCAGGTCTCAGGACCCCA...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCAGCAGCGTGTCCAGGTaGGAGCTTGTGTGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: AGSGQRHGPHSGPSGTPTSSVSR*ELVCRS
Trigger: TGACCTGCACACAAGCTCGCACCTGGACACGCTGCT...GGTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACAGGAGCTTGACCACGTaGAGCCGCGTGTTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHRSLTT*SRVLPR
Trigger: TCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCT...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGAGTGCCAGGAGCTCGTaGGTCAGGGCTGCATCATTG +
Preference number: 4 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTSARSS*VRAASL
Trigger: CAATGATGCAGCCCTGACGCACGAGCTCCTGGCACT...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGCTGACGATGACAGACTaGCTCTGCTCCCCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTLTMTD*LCSPSN
Trigger: GTTCGAGGGGGAGCAGAGCCAGTCTGTCATCGTCAG...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACTCAGGGCTGCATCATTaGCGCTCAGGGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHSGLHH*RSGHWP
Trigger: TGGCCAGTGCCCTGAGCGCCAATGATGCAGCCCTGA...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCAGGTGGCTGTCCAGCTaGGGCCTGGAGGCTGAGGGC +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSRWLSS*GLEAEG
Trigger: GCCCTCAGCCTCCAGGCCCCAGCTGGACAGCCACCT...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGAGGGCCTGGGCACTCTaGCTTTGGGGAAGCCCCAAG +
Preference number: 4 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWRAWAL*LWGSPK
Trigger: CTTGGGGCTTCCCCAAAGCCAGAGTGCCCAGGCCCT...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCAGAGCCGGACTGGCCTaGTTGAAAGTGCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: AGSGQRHGPHSGPSGTPTRAGLA*LKVQGL
Trigger: CAGACCCTGCACTTTCAACCAGGCCAGTCCGGCTCT...GGTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCACCAGCAGCTTGCGGTTaGCGACCTTGCACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQAPAACG*RPCTPA
Trigger: TGCAGGAGTGCAAGGTCGTCAACCGCAAGCTGCTGG...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACGGCCTGGCAAGGGGCTaGGGGCTCCGTGACTTTGCT +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDGLARG*GLRDFA
Trigger: AGCAAAGTCACGGAGCCCTCAGCCCCTTGCCAGGCC...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTCGTGCAGCCGCGTGTTaGCCAGAGGCGGAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPRAAAC*PEAEPA
Trigger: TGCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACG...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACTGGGCGTCTCAGGGCTaGTGTCAGGAGGTGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDWASQG*CQEVAP
Trigger: TGGGGCCACCTCCTGACAGCAGCCCTGAGACGCCCA...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGCCTGCTTCTCCAGGGTaGCCAGCAGTTGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWPASPG*PAVGQA
Trigger: AGCCTGACCAACTGCTGGCCACCCTGGAGAAGCAGG...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTCGGACCTCGGCCTCCTaGGCTCCAGCAGGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPRTSAS*APAGSA
Trigger: TGCTGACCCTGCTGGAGCCCAGGAGGCCGAGGTCCG...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAGCAAGGCGCCCACACTaGACACAGTGCTTTCCAGGG +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQAARRPH*TQCFPG
Trigger: CCCTGGAAAGCACTGTGTCCAGTGTGGGCGCCTTGC...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGGGTCCAGCATGGTGTTaGGCACGTCCAGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWGPAWC*ARPVPG
Trigger: TCCTGGCACTGGACGTGCCCAACACCATGCTGGACC...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGGTCATGCGCTGCATCTaGAAGTCCATGAAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTVMRCI*KSMKAC
Trigger: GCAGGCCTTCATGGACTTCCAGATGCAGCGCATGAC...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACTTGGGCCTGTCTCCCTaGCACCAGCCTCCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDLGLSP*HQPPGG
Trigger: ACCCCCAGGAGGCTGGTGCCAGGGAGACAGGCCCAA...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGCAGTGCAAATGGGGGTaGGTTGGGCCTGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWQCKWG*VGPVSL
Trigger: CAGGGAGACAGGCCCAACCCACCCCCATTTGCACTG...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCGGACAGCTGGGCACGTaGGTGGCAACCTTGGGACCC +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSGQLGT*VATLGP
Trigger: GGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCC...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGTGGCCAGCAGTGGGTTaGGGCTGCCGGTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GGNLGTPNTSSRWDGTGKWPAVG*GCRCSA
Trigger: TGCAGAGCACCGGCAGCCTCAACCCACTGCTGGCCA...CTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTCCCGGCTCAGGCGGATaGTGTCACACAGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPPGSGG*CHTGTG
Trigger: CCCAGTCCCTGTGTGACATCATCCGCCTGAGCCGGG...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGCCGTGGAAGGTGGCCTaGAGGTCCCCGATGCTAACC +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSPWKVA*RSPMLT
Trigger: GGTTAGCATCGGGGACCTTCAGGCCACCTTCCACGG...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTCCCCCATGGTGGACCTaGGCTAAAAGGCCGGGTGTG +
Preference number: 4 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGPPWWT*AKRPGV
Trigger: CACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGG...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGACCCAGGCCACCATTaGTTGCAGGTGGGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSDPGHH*LQVGWL
Trigger: CAGCCACCCCACCTGCAAGCAATGGTGGCCTGGGTC...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGTGGACTTGGATCATCTaGTCCCGGCTCAGGCGGATG +
Preference number: 4 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWWTWII*SRLRRM
Trigger: CATCCGCCTGAGCCGGGAGCAGATGATCCAAGTCCA...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGCCACACTGGACACAGTaGTTTCCAGGGCCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSPHWTQ*FPGPPG
Trigger: CCCAGGGGGCCCTGGAAAGCACTGTGTCCAGTGTGG...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTGTTGGGCACGTCCAGTaGCAGGAGCTCGTGCGTCAG +
Preference number: 4 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGVGHVQ*QELVRQ
Trigger: CTGACGCACGAGCTCCTGGCACTGGACGTGCCCAAC...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTCCCTTCTCCGTGTTCTaGACCAGGGCACCGGCCACT +
Preference number: 4 (lower is better)
Translates to: PLGRNREGCALEPPAQFGPFSVF*TRAPAT
Trigger: AGTGGCCGGTGCCCTGGTGCAGAACACGGAGAAGGG...ACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTAGCAGCTGCCGCAGCTaGTCTGCATTGGGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGSSCRS*SALGPF
Trigger: GAAGGGGCCCAATGCAGAGCAGCTGCGGCAGCTGCT...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAAGCTCCTTCAGCAGCTaGCGCAGCTGCTCTGCATTG +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQASSFSS*RSCSAL
Trigger: CAATGCAGAGCAGCTGCGGCAGCTGCTGAAGGAGCT...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAACCATTGCTTGCAGGTaGGGTGGCTGCAGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQATIACR*GGCSRK
Trigger: CTTCCTGCTGCAGCCACCCCACCTGCAAGCAATGGT...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCGTAGCGGCTCCAGCTTaGGAGGCTCCAGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSVAAPA*EAPAGA
Trigger: AGCTCCTGCTGGAGCCTCCCAAGCTGGAGCCGCTAC...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCTTCACAACAGGGTTTTaGATGGGCGTCTCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: AGSGQRHGPHSGPSGTPTFTTGF*MGVSGL
Trigger: CAGCCCTGAGACGCCCATCCAAAACCCTGTTGTGAA...GGTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAGAGGAGTGTAGGTGGTaGGTGTTCACCAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQAEECRW*VFTRST
Trigger: GGTGGACCTGGTGAACACCCACCACCTACACTCCTC...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCAGCTATTGGGAGCCTaGGGATGCAGGCCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDQLLGA*GCRPFR
Trigger: CCGGAAGGGCCTGCATCCCCAGGCTCCCAATAGCTG...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGCACCAGGCAGCTATTaGGAGCCTGGGGATGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSAPGSY*EPGDAG
Trigger: GCCTGCATCCCCAGGCTCCCAATAGCTGCCTGGTGC...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACTCTTCTCAGTGCAAATaGGGGTGGGTTGGGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHSSQCK*GWVGPV
Trigger: GACAGGCCCAACCCACCCCCATTTGCACTGAGAAGA...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTACATCCTGCCTCAGCTaGGGCCGCTCCACACAGGTG +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPTSCLS*GRSTQV
Trigger: CACCTGTGTGGAGCGGCCTCAGCTGAGGCAGGATGT...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGAGATTTGGCCGCCGCTaGCGCACCAGGCAGCTATTG +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSRFGRR*RTRQLL
Trigger: CAATAGCTGCCTGGTGCGGCAGCGGCGGCCAAATCT...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGAACAGGGAAGGCTGTaGTTTGGAGCCGCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSEQGRL*FGAASP
Trigger: TGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTC...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCAGGGCATCATTGATCTaGGGCACATCTGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: AGSGQRHGPHSGPSGTPTRASLI*GTSEVR
Trigger: TCTGACCTCAGATGTGCCCCAGATCAATGATGCCCT...GGTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAAGGGTCAGCAGCACCTaGATCCCACTGACGATGACA +
Preference number: 4 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQARVSST*IPLTMT
Trigger: TGTCATCGTCAGTGGGATCCAGGTGCTGCTGACCCT...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGGGCATCTGTAGGCACTaGGTCAAAGGTGGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWGICRH*VKGGCP
Trigger: TGGACAGCCACCTTTGACCCAGTGCCTACAGATGCC...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACATGCTAACCAAGGCCTaGCAAGGGGCTGAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDMLTKA*QGAEGS
Trigger: GGAGCCCTCAGCCCCTTGCCAGGCCTTGGTTAGCAT...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATACAATGGGGGCCATCGTaGGACCCGCCCTGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIQWGPS*DPPCPH
Trigger: GTGGGGGCAGGGCGGGTCCCACGATGGCCCCCATTG...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTCAAATGGGGGTGGGTTaGGCCTGTCTCCCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPQMGVG*ACLPGT
Trigger: GGTGCCAGGGAGACAGGCCCAACCCACCCCCATTTG...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTAACACCAGCTCCCGCTaGGACGGAACAGGGAAGGCT +
Preference number: 4 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGNTSSR*DGTGKA
Trigger: AGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTT...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGGGGACAAGGTCACTTaGCAACAGGGCTGGGACCTC +
Preference number: 4 (lower is better)
Translates to: PLGRNREGCALEPPAQFGGDKVT*QQGWDL
Trigger: GAGGTCCCAGCCCTGTTGCCAAGTGACCTTGTCCCC...ACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATAGTATCGGAGGAGGCGTaGGGGCCTGGGCACTCTGGC +
Preference number: 4 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIVSEEA*GPGHSG
Trigger: GCCAGAGTGCCCAGGCCCTCACGCCTCCTCCGATAC...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACGAGGTGCCAATGTGCTaGAGCAGCAGGTCCACGAAG +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDEVPMC*SSRSTK
Trigger: CTTCGTGGACCTGCTGCTGCAGCACATTGGCACCTC...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTTTCGACGGGTGGATCTaGTCAATCAGCCGCTGGACG +
Preference number: 4 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGFDGWI*SISRWT
Trigger: CGTCCAGCGGCTGATTGAGCAGATCCACCCGTCGAA...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGCTGCCGCAGCTGCTCTaGATTGGGCCCCTTCTCCGT +
Preference number: 4 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVLPQLL*IGPLLR
Trigger: ACGGAGAAGGGGCCCAATGCAGAGCAGCTGCGGCAG...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGGGCTGCACAGCCAATaGCCTCCTCGTCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGNLGTPNTSSRWDGTGKGLHSQ*PPRLPP
Trigger: AGGAGGAAGACGAGGAGGGCATTGGCTGTGCAGCCC...CTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGTCTCGCAGGCCACACTaGGGTACTTGTAGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: GGNLGTPNTSSRWDGTGKSRRPH*GTCSAA
Trigger: GGCTGCGCTACAAGTACCCCAGTGTGGCCTGCGAGA...CTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGGCTCTGGGCTGTCCTaGACTTGGATCATCTGCTCC +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSGSGLS*TWIICS
Trigger: GGAGCAGATGATCCAAGTCCAGGACAGCCCAGAGCC...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTGCCCCAAGCTCAGCATaGTGCTCACGCATCCCTCTA +
Preference number: 4 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGAPSSA*CSRIPL
Trigger: TAGAGGGATGCGTGAGCACCATGCTGAGCTTGGGGC...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGGCTCCTGCTGCTCGCTaGGCAGCTCCTTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVAPAAR*AAPSAA
Trigger: AGCTGCTGAAGGAGCTGCCCAGCGAGCAGCAGGAGC...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTCCATGTTCTTCTTGTTaGTCTCCGCCAGGGGCCCCG +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPPCSSC*SPPGAP
Trigger: CGGGGCCCCTGGCGGAGACCAACAAGAAGAACATGG...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCTGGAGGAGTGTAGGTaGTGGGTGTTCACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSLEECR*WVFTRS
Trigger: GGACCTGGTGAACACCCACCACCTACACTCCTCCAG...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGGCACTGGGTCAAAGGTaGCTGTCCAGCTGGGGCCTG +
Preference number: 4 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVALGQR*LSSWGL
Trigger: CAGGCCCCAGCTGGACAGCCACCTTTGACCCAGTGC...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTGCATCTGGAAGTCCATaGAGGCCTGCTGCAGCACAG +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPASGSP*RPAAAQ
Trigger: CTGTGCTGCAGCAGGCCTTCATGGACTTCCAGATGC...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCAGCCGAAGTGGTCAATaGAGGCAGAGGTCATGCGCT +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSSRSGQ*RQRSCA
Trigger: AGCGCATGACCTCTGCCTTCATTGACCACTTCGGCT...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTGAAGACGGGGGAAGTTaGCCCGGTTTCCACAGTCCA +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPEDGGS*PGFHSP
Trigger: TGGACTGTGGAAACCGGGGCAACTTCCCCCGTCTTC...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGTGCTCAATCGTCTCCTaGTTCTCCAGGGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GGNLGTPNTSSRWDGTGKCSIVS*FSRVAS
Trigger: GCTGGCCACCCTGGAGAAGCAGGAGACGATTGAGCA...CTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCCATCAAACTGCTGGATaGGGTCCTTGTAGCATATCT +
Preference number: 4 (lower is better)
Translates to: AGSGQRHGPHSGPSGTPTHQTAG*GPCSIS
Trigger: AGATATGCTACAAGGACCGCATCCAGCAGTTTGATG...GGTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACTCATCCTTCGACGGGTaGATCTGCTCAATCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDSSFDG*ICSISR
Trigger: GCGGCTGATTGAGCAGATCCACCCGTCGAAGGATGA...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTAGAAGAGGTCCAGCATaGTGTTGGGCACGTCCAGTG +
Preference number: 4 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGRRGPA*CWARPV
Trigger: CACTGGACGTGCCCAACACCATGCTGGACCTCTTCT...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCTTTGCTGCCTTCTGTaGCTTCCTGAGGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDLCCLL*LPEVLR
Trigger: CCTCAGCACCTCAGGAAGCCACAGAAGGCAGCAAAG...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGCACCCCCACCCACGCTaGGCCGTCCCCCATGGTGGA +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLHPHPR*AVPHGG
Trigger: TCCACCATGGGGGACGGCCCAGCGTGGGTGGGGGTG...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGCACCCAGGGCATCATTaGTCTGGGGCACATCTGAGG +
Preference number: 4 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVHPGHH*SGAHLR
Trigger: CCTCAGATGTGCCCCAGATCAATGATGCCCTGGGTG...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGTCAATCTCCGGGCTCTaGGGCCGGCCTCAGGGCCTC +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLSISGL*GRPQGL
Trigger: GAGGCCCTGAGGCCGGCCGCAGAGCCCGGAGATTGA...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGATGACAGACTGGCTCTaGTCCCCCTCGAACATGTTG +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSMTDWL*SPSNML
Trigger: CAACATGTTCGAGGGGGAGCAGAGCCAGTCTGTCAT...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTTCCACCAGGCGGCACTaGTGCAGCAGATGTTTCACA +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPSTRRH*CSRCFT
Trigger: TGTGAAACATCTGCTGCAGCAGTGCCGCCTGGTGGA...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTCAACAGGGTTTTGGATaGGCGTCTCAGGGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPQQGFG*ASQGCC
Trigger: ACAGCAGCCCTGAGACGCCCATCCAAAACCCTGTTG...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGGCAGCTGCTCTGCATTaGGCCCCTTCTCCGTGTTCT +
Preference number: 4 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVAAALH*APSPCS
Trigger: AGAACACGGAGAAGGGGCCCAATGCAGAGCAGCTGC...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGCGTCCTCATCGTCACTaGAGGAGTGTAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVRPHRH*RSVGGG
Trigger: CCCACCACCTACACTCCTCCAGTGACGATGAGGACG...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATAGGGAAGGCTGTGCTTTaGAGCCGCCAGCCCAGTTCG +
Preference number: 4 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIGKAVL*SRQPSS
Trigger: CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCC...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTCCCCCTCGAACATGTTaGTTAAGAGCTGCTCAATCG +
Preference number: 4 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGPPRTC*LRAAQS
Trigger: CGATTGAGCAGCTCTTAAGCAACATGTTCGAGGGGG...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATAGCCAGGAGCTCCAGCTaGCCATCCACACTGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIARSSS*PSTLLK
Trigger: CTTCAGCAGTGTGGATGGGCAGCTGGAGCTCCTGGC...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACAACTTCTCTTCTCAGTaGAAATGGGGGTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDNFSSQ*KWGWVG
Trigger: CCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTT...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp TCCCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGAGAAAGGACACGAGCTaGTCTGTCTTGCGGTTGATG +
Preference number: 4 (lower is better)
Translates to: SRWDGTGKAVLWSRQPSSRKDTS*SVLRLM
Trigger: CATCAACCGCAAGACAGACCAGCTCGTGTCCTTTCT...CGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGTGCTCAATCAGCCGCTaGACGATCTTCTCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: GGNLGTPNTSSRWDGTGKCSISR*TIFSSL
Trigger: CAACGAGGAGAAGATCGTCCAGCGGCTGATTGAGCA...CTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGGGGCTGAGGGCTCCGTaGCTTTGCTGCCTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLGLRAP*LCCLLW
Trigger: CCACAGAAGGCAGCAAAGTCACGGAGCCCTCAGCCC...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGCAGGCCACCATTGCTTaGAGGTGGGGTGGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLQATIA*RWGGCS
Trigger: GCTGCAGCCACCCCACCTGCAAGCAATGGTGGCCTG...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCGGGACTGGGATGCGTTaGAATGTTGATTCTCATCCT +
Preference number: 4 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSGTGMR*NVDSHP
Trigger: AGGATGAGAATCAACATTCCAACGCATCCCAGTCCC...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTATGTTGCTTAAGAGCTaGTCAATCGTCTCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: PLGRNREGCALEPPAQFGMLLKS*SIVSCF
Trigger: GAAGCAGGAGACGATTGAGCAGCTCTTAAGCAACAT...ACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGGAGGCGGAGCCAGCATaGCCCATGTCATCTGTAGCG +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLEAEPA*PMSSVA
Trigger: CGCTACAGATGACATGGGGCATGCTGGCTCCGCCTC...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CTAGGAGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGTCCCACTGCTCCTGCTaGTCGCTGGGCAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LGGNAPKLLFSVQMGVGWSHCSC*SLGSSF
Trigger: GAAGGAGCTGCCCAGCGAGCAGCAGGAGCAGTGGGA...CCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCTCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATAAAGTCCATGAAGGCCTaGTGCAGCACAGCCTCCTCA +
Preference number: 4 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIKSMKA*CSTASS
Trigger: TGAGGAGGCTGTGCTGCAGCAGGCCTTCATGGACTT...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTACGCATCCCTCTACTTaGGCATGCAAGAAGTTGTTG +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPTHPST*ACKKLL
Trigger: CAACAACTTCTTGCATGCCCAAGTAGAGGGATGCGT...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTTCATTGAAGCCGAAGTaGTCAATGAAGGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPSLKPK*SMKAEV
Trigger: GACCTCTGCCTTCATTGACCACTTCGGCTTCAATGA...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CTAGGAGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGCACTGTCCGAGGAGCTaGGGGCAGAACGGATCCCGT +
Preference number: 4 (lower is better)
Translates to: LGGNAPKLLFSVQMGVGWHCPRS*GQNGSR
Trigger: ACGGGATCCGTTCTGCCCCCAGCTCCTCGGACAGTG...CCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCTCCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR TCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGGATCTGGGGCACATCTaGGGTCAGAATCTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLDLGHI*GQNLAG
Trigger: GCCTGCGAGATTCTGACCTCAGATGTGCCCCAGATC...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGACGACCTTGCACTCCTaGAGCACGTCTTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLTTLHS*STSSSS
Trigger: GGACGAGGAAGACGTGCTGCAGGAGTGCAAGGTCGT...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp CTAGGAGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGCTATCTGGCGGCTCCTaGGTGACCCAGGCCACCATT +
Preference number: 4 (lower is better)
Translates to: LGGNAPKLLFSVQMGVGWLSGGS*VTQATI
Trigger: AATGGTGGCCTGGGTCACCCAGGAGCCGCCAGATAG...CCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCTCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATAACACAGGGACTGGGATaGGTTGGAATGTTGATTCTC +
Preference number: 4 (lower is better)
Translates to: RQPSSVSSLSLALLPLSITQGLG*VGMLIL
Trigger: GAGAATCAACATTCCAACGCATCCCAGTCCCTGTGT...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CTAGGAGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGCCAAGCTCAGCATGGTaGTCACGCATCCCTCTACTT +
Preference number: 4 (lower is better)
Translates to: LGGNAPKLLFSVQMGVGWPSSAW*SRIPLL
Trigger: AAGTAGAGGGATGCGTGAGCACCATGCTGAGCTTGG...CCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp CTAGGAGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCAGAGGTCATGCGCTaGATCTGGAAGTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: LGGNAPKLLFSVQMGVGWAEVMR*IWKSMK
Trigger: CTTCATGGACTTCCAGATGCAGCGCATGACCTCTGC...CCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCTCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR GCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGAGGTGCGAGCTTGTGTaGAGGTCAAACTTCCAAAAC +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLRCELV*RSNFQN
Trigger: GTTTTGGAAGTTTGACCTGCACACAAGCTCGCACCT...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CCA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGATATCTCAAGTAGGTTaGCGTTGGGGTTCTCATCGT +
Preference number: 4 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLISQVG*RWGSHR
Trigger: ACGATGAGAACCCCAACGCCAACCTACTTGAGATAT...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS CCA 90 bp CCTCCGGGGTCCGCAGGCGAGGTGGGCGTGCGGGCCGAGGCGGGTTaGCGAGCCGGGTCGCGAGGCCCACGCAGGCGCCTCAGCCGGGAA +
Preference number: 5 (lower is better)
Translates to: PPGSAGEVGVRAEAG*RAGSRGPRRRLSRE
Trigger: TTCCCGGCTGAGGCGCCTGCGTGGGCCTCGCGACCCGGCTCGCCAACCCGCCTCGGCCCGCACGCCCACCTCGCCTGCGGACCCCGGAGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS CCA 90 bp GGCGTCACTAGTCCGCGTAGGCACCTCCGGGGTCCGCAGGCGAGGTaGGCGTGCGGGCCGAGGCGGGTTGGCGAGCCGGGTCGCGAGGCC +
Preference number: 5 (lower is better)
Translates to: GVTSPRRHLRGPQAR*ACGPRRVGEPGREA
Trigger: GGCCTCGCGACCCGGCTCGCCAACCCGCCTCGGCCCGCACGCCCACCTCGCCTGCGGACCCCGGAGGTGCCTACGCGGACTAGTGACGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGACGTGCAGCCGCGTGTaGCCCAGAGGCGGAGCCAGC +
Preference number: 5 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTTCSRV*PRGGAS
Trigger: GCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACGT...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS GCA 90 bp GCGCCCTCATCTCTTGCTACCTCCCGCGTGGGCGTCACACCTGACTaGCCTCAGCCGGGGCTGGGCTGCTCCCTCCTCCTTCCCGGAGCT +
Preference number: 5 (lower is better)
Translates to: APSSLATSRVGVTPD*PQPGLGCSLLLPGA
Trigger: AGCTCCGGGAAGGAGGAGGGAGCAGCCCAGCCCCGGCTGAGGGCAGTCAGGTGTGACGCCCACGCGGGAGGTAGCAAGAGATGAGGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592242.1
CDS-3UTR CAA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACTGTAGCGGCTCCAGCTaGGGAGGCTCCAGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHCSGSS*GGSSRS
Trigger: GCTCCTGCTGGAGCCTCCCAAGCTGGAGCCGCTACA...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGAGGTCCAGCATGGTGTaGGGCACGTCCAGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTRSSMV*GTSSAR
Trigger: CCTGGCACTGGACGTGCCCAACACCATGCTGGACCT...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp TGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCCTCTGGCACCCCCACCGCACCAGGCAGCTATaGGGAGCCTGGGGATGCAGG +
Preference number: 5 (lower is better)
Translates to: CRVWAKARPPLGTLWHPHRTRQL*GAWGCR
Trigger: CCTGCATCCCCAGGCTCCCAATAGCTGCCTGGTGCG...GTGGGGGTGCCAGAGGGTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CCCGGGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTGCCGCACCAGGCAGTCAGGGCTGCATCATaGGCGCTCAGGGCACTGGCC +
Preference number: 5 (lower is better)
Translates to: PGRSTGGRKIWPPLPHQAVRAAS*ALRALA
Trigger: GGCCAGTGCCCTGAGCGCCAATGATGCAGCCCTGAC...TGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS TCA 90 bp GCGTCAGGGCTGCATCATTGGCGCTCAGGGCACTGGCCAGGAGCTTaGCCACGTGCAGCCGCGTGTTGCCCAGAGGCGGAGCCAGCATGC +
Preference number: 5 (lower is better)
Translates to: ASGLHHWRSGHWPGA*PRAAACCPEAEPAC
Trigger: GCATGCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAGCCCTGACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS CCA 90 bp GACCCCTTGGCCCTGCCGTGTGGTGGAAGCTTGGAGAAGGGAAACTaGAGGGGGACTCACCGGACACCAGGTGGCTGGCCCAGACGGGCC +
Preference number: 5 (lower is better)
Translates to: DPLALPCGGSLEKGN*RGTHRTPGGWPRRA
Trigger: GGCCCGTCTGGGCCAGCCACCTGGTGTCCGGTGAGTCCCCCTCCAGTTTCCCTTCTCCAAGCTTCCACCACACGGCAGGGCCAAGGGGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586690.1
CDS-3UTR CAA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGAGGAAGTCCAGCAGCTaGCGGTTGACGACCTTGCAC +
Preference number: 5 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTRKSSS*RLTTLH
Trigger: GTGCAAGGTCGTCAACCGCAAGCTGCTGGACTTCCT...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACCTGGCCAGCAGTGGGTaGAGGCTGCCGGTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDLASSG*RLPVLC
Trigger: GCAGAGCACCGGCAGCCTCAACCCACTGCTGGCCAG...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACGCACTGGCCAGGAGCTaGACCACGTGCAGCCGCGTG +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDALARS*TTCSRV
Trigger: CACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGC...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS GCA 90 bp GCTGCATCATTGGCGCTCAGGGCACTGGCCAGGAGCTTGACCACGTaGAGCCGCGTGTTGCCCAGAGGCGGAGCCAGCATGCCCCATGTC +
Preference number: 5 (lower is better)
Translates to: AASLALRALARSLTT*SRVLPRGGASMPHV
Trigger: GACATGGGGCATGCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS-3UTR CAA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCCAGGGTGGCCAGCAGTaGGTCAGGCTCTGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSQGGQQ*VRLWAV
Trigger: GACAGCCCAGAGCCTGACCAACTGCTGGCCACCCTG...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACTCCGGGGCAGAGCCATaGGGTATCGGAGGAGGCGTG +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDSGAEP*GIGGGV
Trigger: CACGCCTCCTCCGATACCCAATGGCTCTGCCCCGGA...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS TCA 90 bp ACTTGTAGCGCAGCCGCTCCTCACCGCTATCTGGCGGCTCCTGGGTaGCCCAGGCCACCATTGCTTGCAGGTGGGGTGGCTGCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: TCSAAAPHRYLAAPG*PRPPLLAGGVAAAG
Trigger: TCCTGCTGCAGCCACCCCACCTGCAAGCAATGGTGGCCTGGGTCACCCAGGAGCCGCCAGATAGCGGTGAGGAGCGGCTGCGCTACAAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS TCA 90 bp CGGGCCACCGGGCCCTCTGCAGCCTGGTGCTGGGAGCCCCTCCCATaGGCTGACCATCCAGGGAAAAATGGTCACCCAGACACAGGGACA +
Preference number: 5 (lower is better)
Translates to: RATGPSAAWCWEPLP*ADHPGKNGHPDTGT
Trigger: TGTCCCTGTGTCTGGGTGACCATTTTTCCCTGGATGGTCAGCTCATGGGAGGGGCTCCCAGCACCAGGCTGCAGAGGGCCCGGTGGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS TCA 90 bp GGGACTGGGATGCGTTGGAATGTTGCTGGAACGGGGAGAGACAGGTaGGGATCCTGGTCGGGCCACCGGGCCCTCTGCAGCCTGGTGCTG +
Preference number: 5 (lower is better)
Translates to: GTGMRWNVAGTGRDR*GSWSGHRALCSLVL
Trigger: CAGCACCAGGCTGCAGAGGGCCCGGTGGCCCGACCAGGATCCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS GCA 90 bp TTCTTGTTGGTCTCCGCCAGGGGCCCCGATACGAAGGCTTCCCACTaGTCCTGCTGCTCGCTGGGCAGCTCCTTCAGCAGCTGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: FLLVSARGPDTKASH*SCCSLGSSFSSCRS
Trigger: GCTGCGGCAGCTGCTGAAGGAGCTGCCCAGCGAGCAGCAGGAGCAGTGGGAAGCCTTCGTATCGGGGCCCCTGGCGGAGACCAACAAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587283.5
CDS-3UTR CAA 90 bp CCGCTGGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGGAAGACGGGGGAAGTaGCCCCGGTTTCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: PLGRNREGCALEPPAQFGGRRGK*PRFPQS
Trigger: GGACTGTGGAAACCGGGGCAACTTCCCCCGTCTTCC...ACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCCAGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CGCTGGGCCGTCCCCCATGGTGGACCTGAGCTAAAAGGCCGGGTGTGGGCGTGGTCCACCATGTTCTTCTaGTTGGTCTCCGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RWAVPHGGPELKGRVWAWSTMFF*LVSARG
Trigger: GCCCCTGGCGGAGACCAACAAGAAGAACATGGTGGA...CCACGCCCACACCCGGCCTTTTAGCTCAGGTCCACCATGGGGGACGGCCCAGCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGCTGGGCACTCTGGCTTaGGGGAAGCCCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: GGNLGTPNTSSRWDGTGKLGTLA*GKPQGL
Trigger: GAGCCCTTGGGGCTTCCCCAAAGCCAGAGTGCCCAG...CTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACAGGGAAGGCTGTGCTTaGGAGCCGCCAGCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDREGCA*EPPAQF
Trigger: GAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCT...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTGCCGGACTGGCCTGGTaGAAAGTGCAGGGTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPAGLAW*KVQGLG
Trigger: GCCCAGACCCTGCACTTTCAACCAGGCCAGTCCGGC...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS TCA 90 bp GCTCTCAAGCCACCTCCCAGCCGTCACCTCACACGGTCACCACAGTaGCAGGCCTTCCCACCAGCAGGCCCACCCTCTGGACAGAGGCTT +
Preference number: 5 (lower is better)
Translates to: ALKPPPSRHLTRSPQ*QAFPPAGPPSGQRL
Trigger: AAGCCTCTGTCCAGAGGGTGGGCCTGCTGGTGGGAAGGCCTGTCACTGTGGTGACCGTGTGAGGTGACGGCTGGGAGGTGGCTTGAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS GCA 90 bp GGCTCCTGGGTGACCCAGGCCACCATTGCTTGCAGGTGGGGTGGCTaGAGCAGGAAGTCCAGCAGCTTGCGGTTGACGACCTTGCACTCC +
Preference number: 5 (lower is better)
Translates to: GSWVTQATIACRWGG*SRKSSSLRLTTLHS
Trigger: GGAGTGCAAGGTCGTCAACCGCAAGCTGCTGGACTTCCTGCTGCAGCCACCCCACCTGCAAGCAATGGTGGCCTGGGTCACCCAGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS GCA 90 bp CATGGTGTTGGGCACGTCCAGTGCCAGGAGCTCGTGCGTCAGGGCTaGATCATTGGCGCTCAGGGCACTGGCCAGGAGCTTGACCACGTG +
Preference number: 5 (lower is better)
Translates to: HGVGHVQCQELVRQG*IIGAQGTGQELDHV
Trigger: CACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAGCCCTGACGCACGAGCTCCTGGCACTGGACGTGCCCAACACCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS GCA 90 bp AAGAGGTCCAGCATGGTGTTGGGCACGTCCAGTGCCAGGAGCTCGTaGGTCAGGGCTGCATCATTGGCGCTCAGGGCACTGGCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: KRSSMVLGTSSARSS*VRAASLALRALARS
Trigger: GCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAGCCCTGACGCACGAGCTCCTGGCACTGGACGTGCCCAACACCATGCTGGACCTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS GCA 90 bp GGAGTTCTGAGCCAACGGCAAGAACACAGGCGGGCAGGGACAGAATaGGGCCGTAAGGAGACCGTCCGTCGCCAGTCATCCGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: GVLSQRQEHRRAGTE*GRKETVRRQSSVEG
Trigger: GCCCTCCACGGATGACTGGCGACGGACGGTCTCCTTACGGCCGCATTCTGTCCCTGCCCGCCTGTGTTCTTGCCGTTGGCTCAGAACTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS CCA 90 bp CAAACTTCCAAAACATGGCGCCCTCATCTCTTGCTACCTCCCGCGTaGGCGTCACACCTGACTGCCCTCAGCCGGGGCTGGGCTGCTCCC +
Preference number: 5 (lower is better)
Translates to: QTSKTWRPHLLLPPA*ASHLTALSRGWAAP
Trigger: GGGAGCAGCCCAGCCCCGGCTGAGGGCAGTCAGGTGTGACGCCCACGCGGGAGGTAGCAAGAGATGAGGGCGCCATGTTTTGGAAGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592242.1
CDS-3UTR CAA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATACCGGGTCCTGCAGAGTaGAGGGGGTCAGCGCCGGGT +
Preference number: 5 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIPGPAE*RGSAPG
Trigger: ACCCGGCGCTGACCCCCTCAACTCTGCAGGACCCGG...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACTCCAGCAGCTTGCGGTaGACGACCTTGCACTCCTGC +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDSSSLR*TTLHSC
Trigger: GCAGGAGTGCAAGGTCGTCAACCGCAAGCTGCTGGA...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGCACGCATCCCTCTACTaGGGCATGCAAGAAGTTGTT +
Preference number: 5 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTHASLY*GMQEVV
Trigger: AACAACTTCTTGCATGCCCAAGTAGAGGGATGCGTG...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTCGCAGCTGCTCTGCATaGGGCCCCTTCTCCGTGTTC +
Preference number: 5 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPRSCSA*GPFSVF
Trigger: GAACACGGAGAAGGGGCCCAATGCAGAGCAGCTGCG...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTACCATGTTCTTCTTGTaGGTCTCCGCCAGGGGCCCC +
Preference number: 5 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGTMFFL*VSARGP
Trigger: GGGGCCCCTGGCGGAGACCAACAAGAAGAACATGGT...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp AAGGCCGGGTGTGGGCGTGGCCGTCTGCGCTGCAGCGTGGGACAGCTGGGCACGCATATCTCAAGTAGGTaGGCGTTGGGGTTCTCATCG +
Preference number: 5 (lower is better)
Translates to: KAGCGRGRLRCSVGQLGTHISSR*ALGFSS
Trigger: CGATGAGAACCCCAACGCCAACCTACTTGAGATATG...CGTGCCCAGCTGTCCCACGCTGCAGCGCAGACGGCCACGCCCACACCCGGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCACGTGGGTGGCAACCTaGGGACCCCTAACACCAGCT +
Preference number: 5 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSTWVAT*GPLTPA
Trigger: AGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGT...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS TCA 90 bp CACCGGGCCCTCTGCAGCCTGGTGCTGGGAGCCCCTCCCATGAGCTaGCCATCCAGGGAAAAATGGTCACCCAGACACAGGGACACGTGT +
Preference number: 5 (lower is better)
Translates to: HRALCSLVLGAPPMS*PSREKWSPRHRDTC
Trigger: ACACGTGTCCCTGTGTCTGGGTGACCATTTTTCCCTGGATGGTCAGCTCATGGGAGGGGCTCCCAGCACCAGGCTGCAGAGGGCCCGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACAGGATGCCCATGACCTaGCTGAAGAAGCTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDRMPMT*LKKLAS
Trigger: GCTGGCCAGCTTCTTCAGCAAGGTCATGGGCATCCT...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATAGGGAGGACGGAAGATTaGGCCGCCGCTGCCGCACCA +
Preference number: 5 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIGRTED*AAAAAP
Trigger: TGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCC...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS GCA 90 bp GCCAGCAGTTGGTCAGGCTCTGGGCTGTCCTGGACTTGGATCATCTaGTCCCGGCTCAGGCGGATGATGTCACACAGGGACTGGGATGCG +
Preference number: 5 (lower is better)
Translates to: ASSWSGSGLSWTWII*SRLRRMMSHRDWDA
Trigger: CGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAGCCGGGAGCAGATGATCCAAGTCCAGGACAGCCCAGAGCCTGACCAACTGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591602.1
CDS CCA 90 bp TCCAGGGTGGCCAGCAGTTGGTCAGGCTCTGGGCTGTCCTGGACTTaGATCATCTGCTCCCGGCTCAGGCGGATGATGTCACACAGGGAC +
Preference number: 5 (lower is better)
Translates to: SRVASSWSGSGLSWT*IICSRLRRMMSHRD
Trigger: GTCCCTGTGTGACATCATCCGCCTGAGCCGGGAGCAGATGATCCAAGTCCAGGACAGCCCAGAGCCTGACCAACTGCTGGCCACCCTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591602.1
CDS CCA 90 bp AGGCGGATGATGTCACACAGGGACTGGGATGCGTTGGAATGTTGCTaGAACGGGGAGAGACAGGTGAGGATCCTGGTCGGGCCACCGGGC +
Preference number: 5 (lower is better)
Translates to: RRMMSHRDWDALECC*NGERQVRILVGPPG
Trigger: GCCCGGTGGCCCGACCAGGATCCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACTGTCCAGGTGCGAGCTaGTGTGCAGGTCAAACTTCC +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDCPGAS*CAGQTS
Trigger: GGAAGTTTGACCTGCACACAAGCTCGCACCTGGACA...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp GGTGGCAACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCACCCAGGGCATCATaGATCTGGGGCACATCTGAG +
Preference number: 5 (lower is better)
Translates to: GGNLGTPNTSSRWDGTGKAPRAS*IWGTSE
Trigger: CTCAGATGTGCCCCAGATCAATGATGCCCTGGGTGC...CTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACTGGTCTGTCTTGCGGTaGATGAGGATGCCCATGACC +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDWSVLR*MRMPMT
Trigger: GGTCATGGGCATCCTCATCAACCGCAAGACAGACCA...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGTGGGCTGTCCTGGACTaGGATCATCTGCTCCCGGCT +
Preference number: 5 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVWAVLD*DHLLPA
Trigger: AGCCGGGAGCAGATGATCCAAGTCCAGGACAGCCCA...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS GCA 90 bp CTCAGGCGGATGATGTCACACAGGGACTGGGATGCGTTGGAATGTTaGTGGAACGGGGAGAGACAGGTGAGGATCCTGGTCGGGCCACCG +
Preference number: 5 (lower is better)
Translates to: LRRMMSHRDWDALEC*WNGERQVRILVGPP
Trigger: CGGTGGCCCGACCAGGATCCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS GCA 90 bp AGGTGCGAGCTTGTGTGCAGGTCAAACTTCCAAAACATGGCGCCCTaGAGGCATAGACACAACCAGCGCCGCGTCAGACGCCCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: RCELVCRSNFQNMAP*RHRHNQRRVRRPRE
Trigger: CTCCCTGGGGCGTCTGACGCGGCGCTGGTTGTGTCTATGCCTGCAGGGCGCCATGTTTTGGAAGTTTGACCTGCACACAAGCTCGCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587283.5
CDS CCA 90 bp GCGTGTCCAGGTGCGAGCTTGTGTGCAGGTCAAACTTCCAAAACATaGCGCCCTGCAGGCATAGACACAACCAGCGCCGCGTCAGACGCC +
Preference number: 5 (lower is better)
Translates to: ACPGASLCAGQTSKT*RPAGIDTTSAASDA
Trigger: GGCGTCTGACGCGGCGCTGGTTGTGTCTATGCCTGCAGGGCGCCATGTTTTGGAAGTTTGACCTGCACACAAGCTCGCACCTGGACACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587283.5
CDS-3UTR CAA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGACGAGCTGGTCTGTCTaGCGGTTGATGAGGATGCCC +
Preference number: 5 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVTSWSV*RLMRMP
Trigger: GGGCATCCTCATCAACCGCAAGACAGACCAGCTCGT...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATAGGGCACCGGCCACTCTaGTCAGGTGACCCATGTAGC +
Preference number: 5 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIGHRPL*SGDPCS
Trigger: GCTACATGGGTCACCTGACAAGAGTGGCCGGTGCCC...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGGGGAAGTTGAACTCCTaGAGCCGGTCGTCCTCATCG +
Preference number: 5 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVGKLNS*SRSSSS
Trigger: CGATGAGGACGACCGGCTCAAGGAGTTCAACTTCCC...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS GCA 90 bp GACATAATGGAAGAAGAGGTCCAGCATGGTGTTGGGCACGTCCAGTaGCAGGAGCTCGTGCGTCAGGGCTGCATCATTGGCGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: DIMEEEVQHGVGHVQ*QELVRQGCIIGAQG
Trigger: GCCCTGAGCGCCAATGATGCAGCCCTGACGCACGAGCTCCTGGCACTGGACGTGCCCAACACCATGCTGGACCTCTTCTTCCATTATGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS CCA 90 bp GCGTGTCCAGGTGCGAGCTTGTGTGCAGGTCAAACTTCCAAAACATaGCGCCCTCATCTCTTGCTACCTCCCGCGTGGGCGTCACACCTG +
Preference number: 5 (lower is better)
Translates to: ACPGASLCAGQTSKT*RPHLLLPPAWASHL
Trigger: CAGGTGTGACGCCCACGCGGGAGGTAGCAAGAGATGAGGGCGCCATGTTTTGGAAGTTTGACCTGCACACAAGCTCGCACCTGGACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592242.1
CDS-3UTR CAA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGCCAGGCCACCATTGCTaGCAGGTGGGGTGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLPGHHC*QVGWLQ
Trigger: CTGCAGCCACCCCACCTGCAAGCAATGGTGGCCTGG...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp GGGACGGAACAGGGAAGGCTGTGCTTTGGAGCCGCCAGCCCAGTTCGGTGTCCTTCCTCGTTGAGCCAATaGACAACATCCTGCCTCAGC +
Preference number: 5 (lower is better)
Translates to: GTEQGRLCFGAASPVRCPSSLSQ*TTSCLS
Trigger: GCTGAGGCAGGATGTTGTCAATTGGCTCAACGAGGA...AGGACACCGAACTGGGCTGGCGGCTCCAAAGCACAGCCTTCCCTGTTCCGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CCCTGGCACCAGCCTCCTGGGGGTCCAGAGGAGAGAATGTGGGGGTGTCAGGGTTCCCCCTCGAACATGTaGCTTAAGAGCTGCTCAATC +
Preference number: 5 (lower is better)
Translates to: PWHQPPGGPEERMWGCQGSPSNM*LKSCSI
Trigger: GATTGAGCAGCTCTTAAGCAACATGTTCGAGGGGGA...ACCCTGACACCCCCACATTCTCTCCTCTGGACCCCCAGGAGGCTGGTGCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATAGCCTCCTCAGGGAAGTaGAACTCCTTGAGCCGGTCG +
Preference number: 5 (lower is better)
Translates to: RQPSSVSSLSLALLPLSIASSGK*NSLSRS
Trigger: CGACCGGCTCAAGGAGTTCAACTTCCCTGAGGAGGC...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS TCA 90 bp CTGGGCTGTCCTGGACTTGGATCATCTGCTCCCGGCTCAGGCGGATaGTGTCACACAGGGACTGGGATGCGTTGGAATGTTGCTGGAACG +
Preference number: 5 (lower is better)
Translates to: LGCPGLGSSAPGSGG*CHTGTGMRWNVAGT
Trigger: CGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAGCCGGGAGCAGATGATCCAAGTCCAGGACAGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS GCA 90 bp GCAGCAGATGTTTCACAACAGGGTTTTGGATGGGCGTCTCAGGGCTaGTGTCAGGAGGTGGCCCCAAGCTCAGCATGGTGCTCACGCATC +
Preference number: 5 (lower is better)
Translates to: AADVSQQGFGWASQG*CQEVAPSSAWCSRI
Trigger: GATGCGTGAGCACCATGCTGAGCTTGGGGCCACCTCCTGACAGCAGCCCTGAGACGCCCATCCAAAACCCTGTTGTGAAACATCTGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS GCA 90 bp CATCTGCTCCCGGCTCAGGCGGATGATGTCACACAGGGACTGGGATaGGTTGGAATGTTGCTGGAACGGGGAGAGACAGGTGAGGATCCT +
Preference number: 5 (lower is better)
Translates to: HLLPAQADDVTQGLG*VGMLLERGETGEDP
Trigger: AGGATCCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAGCCGGGAGCAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS CCA 90 bp TGGATCATCTGCTCCCGGCTCAGGCGGATGATGTCACACAGGGACTaGGATGCGTTGGAATGTTGCTGGAACGGGGAGAGACAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: WIICSRLRRMMSHRD*DALECCWNGERQVR
Trigger: CCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAGCCGGGAGCAGATGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS CCA 90 bp CCGCTCTGTGTCCCCAGCACAGAAGATGTTTGTGCCCCACCCTCATaGCCTGCCTCTCGGAGAGAAGAGACTGCAGAGCTGGAACTCATG +
Preference number: 5 (lower is better)
Translates to: PLCVPSTEDVCAPPS*PASRREETAELELM
Trigger: CATGAGTTCCAGCTCTGCAGTCTCTTCTCTCCGAGAGGCAGGCCATGAGGGTGGGGCACAAACATCTTCTGTGCTGGGGACACAGAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589343.1
CDS-3UTR CAA 90 bp CGTGGGACAGCTGGGCACGTGGGTGGCAACCTTGGGACCCCTAACACCAGCTCCACGATCTTCTCCTCGTaGAGCCAATTGACAACATCC +
Preference number: 5 (lower is better)
Translates to: RGTAGHVGGNLGTPNTSSTIFSS*SQLTTS
Trigger: GGATGTTGTCAATTGGCTCAACGAGGAGAAGATCGT...GGAGCTGGTGTTAGGGGTCCCAAGGTTGCCACCCACGTGCCCAGCTGTCCCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp AACCTTGGGACCCCTAACACCAGCTCCCGCTGGGACGGAACAGGGAAGGCTGTGTTTCACAACAGGGTTTaGGATGGGCGTCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: NLGTPNTSSRWDGTGKAVFHNRV*DGRLRA
Trigger: AGCCCTGAGACGCCCATCCAAAACCCTGTTGTGAAA...CACAGCCTTCCCTGTTCCGTCCCAGCGGGAGCTGGTGTTAGGGGTCCCAAGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACGTGATGTTGGCTGTCTaGTCAAAAGGTGCGTTCACA +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDVMLAV*SKGAFT
Trigger: TGTGAACGCACCTTTTGACAAGACAGCCAACATCAC...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACAGGGAGAAGGTGATGTaGGCTGTCTTGTCAAAAGGT +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDREKVM*AVLSKG
Trigger: ACCTTTTGACAAGACAGCCAACATCACCTTCTCCCT...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp CTGGCCTGGTTGAAAGTGCAGGGTCTGGGCAAAGGCACGGCCCCCACTCGGGACTTCTCATCGTCAGCATaGAGGGAGAAGGTGATGTTG +
Preference number: 5 (lower is better)
Translates to: LAWLKVQGLGKGTAPTRDFSSSA*REKVML
Trigger: CAACATCACCTTCTCCCTCAATGCTGACGATGAGAA...GTCCCGAGTGGGGGCCGTGCCTTTGCCCAGACCCTGCACTTTCAACCAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS TCA 90 bp CGTAGAGCCGGTTCAGAAGGGACTCATCAGCACCCAGGGCATCATTaGTCTGGGGCACATCTGAGGTCAGAATCTCGCAGGCCACACTGG +
Preference number: 5 (lower is better)
Translates to: RRAGSEGTHQHPGHH*SGAHLRSESRRPHW
Trigger: CCAGTGTGGCCTGCGAGATTCTGACCTCAGATGTGCCCCAGATCAATGATGCCCTGGGTGCTGATGAGTCCCTTCTGAACCGGCTCTACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS GCA 90 bp TGTTTGTGCCCCACCCTCATGGCCTGCCTCTCGGAGAGAAGAGACTaGAGAGCTGGAACTCATGTAACAGGAGGCAGACACACGAGGCTG +
Preference number: 5 (lower is better)
Translates to: CLCPTLMACLSERRD*RAGTHVTGGRHTRL
Trigger: CAGCCTCGTGTGTCTGCCTCCTGTTACATGAGTTCCAGCTCTGCAGTCTCTTCTCTCCGAGAGGCAGGCCATGAGGGTGGGGCACAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589343.1
CDS-3UTR CAA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGGAGGGCTCCGTGACTTaGCTGCCTTCTGTGGCTTCC +
Preference number: 5 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLEGSVT*LPSVAS
Trigger: GGAAGCCACAGAAGGCAGCAAAGTCACGGAGCCCTC...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS-3UTR CAA 90 bp AGGCAACGCTCCAAAACTTCTCTTCTCAGTGCAAATGGGGGTGGGTTGGGCCTGTGGGGACAAGGTCACTaGGCAACAGGGCTGGGACCT +
Preference number: 5 (lower is better)
Translates to: RQRSKTSLLSANGGGLGLWGQGH*ATGLGP
Trigger: AGGTCCCAGCCCTGTTGCCAAGTGACCTTGTCCCCA...CAGGCCCAACCCACCCCCATTTGCACTGAGAAGAGAAGTTTTGGAGCGTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS TCA 90 bp AAGGGACTCATCAGCACCCAGGGCATCATTGATCTGGGGCACATCTaGGGTCAGAATCTCGCAGGCCACACTGGGGTACTTGTAGCGCAG +
Preference number: 5 (lower is better)
Translates to: KGLISTQGIIDLGHI*GQNLAGHTGVLVAQ
Trigger: CTGCGCTACAAGTACCCCAGTGTGGCCTGCGAGATTCTGACCTCAGATGTGCCCCAGATCAATGATGCCCTGGGTGCTGATGAGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS-3UTR CAA 90 bp CGCCAGCCCAGTTCGGTGTCCTCACTCTCTCTCGCTCTCCTCCCTCTCTCTATATCAAGTAGGTTGGCGTaGGGGTTCTCATCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RQPSSVSSLSLALLPLSISSRLA*GFSSSA
Trigger: TGCTGACGATGAGAACCCCAACGCCAACCTACTTGA...TATAGAGAGAGGGAGGAGAGCGAGAGAGAGTGAGGACACCGAACTGGGCTGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS TCA 90 bp CTGGGCTGTCCTGGACTTGGATCATCTGCTCCCGGCTCAGGCGGATaGTGTCACACAGGGACTGGGATGCGTTGGAATGTTGATTCTCAT +
Preference number: 5 (lower is better)
Translates to: LGCPGLGSSAPGSGG*CHTGTGMRWNVDSH
Trigger: ATGAGAATCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAGCCGGGAGCAGATGATCCAAGTCCAGGACAGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587283.5
CDS GCA 90 bp CTGTGTCCCCAGCACAGAAGATGTTTGTGCCCCACCCTCATGGCCTaGCTCTCGGAGAGAAGAGACTGCAGAGCTGGAACTCATGTAACA +
Preference number: 5 (lower is better)
Translates to: LCPQHRRCLCPTLMA*LSERRDCRAGTHVT
Trigger: TGTTACATGAGTTCCAGCTCTGCAGTCTCTTCTCTCCGAGAGGCAGGCCATGAGGGTGGGGCACAAACATCTTCTGTGCTGGGGACACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589343.1
CDS GCA 90 bp CCAACTAGAAACTCCAAGAAGGCAGAGATGGCTGAGTTTTGCCACTaGTGTATCCTCAGCCCTGAGAAACCACCAGGCACCCATAGCTGC +
Preference number: 5 (lower is better)
Translates to: PTRNSKKAEMAEFCH*CILSPEKPPGTHSC
Trigger: GCAGCTATGGGTGCCTGGTGGTTTCTCAGGGCTGAGGATACAGCAGTGGCAAAACTCAGCCATCTCTGCCTTCTTGGAGTTTCTAGTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS GCA 90 bp CTCCCTCCAACTAGAAACTCCAAGAAGGCAGAGATGGCTGAGTTTTaGCACTGCTGTATCCTCAGCCCTGAGAAACCACCAGGCACCCAT +
Preference number: 5 (lower is better)
Translates to: LPPTRNSKKAEMAEF*HCCILSPEKPPGTH
Trigger: ATGGGTGCCTGGTGGTTTCTCAGGGCTGAGGATACAGCAGTGGCAAAACTCAGCCATCTCTGCCTTCTTGGAGTTTCTAGTTGGAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS TCA 90 bp GCATGGTGCTCACGCATCCCTCTACTTGGGCATGCAAGAAGTTGTTaGAGACATAATGGAAGAAGAGGTCCAGCATGGTGTTGGGCACGT +
Preference number: 5 (lower is better)
Translates to: AWCSRIPLLGHARSC*RHNGRRGPAWCWAR
Trigger: ACGTGCCCAACACCATGCTGGACCTCTTCTTCCATTATGTCTTCAACAACTTCTTGCATGCCCAAGTAGAGGGATGCGTGAGCACCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS CCA 90 bp CACACTACTCTCTCCCTCCAACTAGAAACTCCAAGAAGGCAGAGATaGCTGAGTTTTGCCACTGCTGTATCCTCAGCCCTGAGAAACCAC +
Preference number: 5 (lower is better)
Translates to: HTTLSLQLETPRRQR*LSFATAVSSALRNH
Trigger: GTGGTTTCTCAGGGCTGAGGATACAGCAGTGGCAAAACTCAGCCATCTCTGCCTTCTTGGAGTTTCTAGTTGGAGGGAGAGAGTAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS TCA 90 bp AACCACCAGGCACCCATAGCTGCTCCAAAAACACTGGCTGAATGTTaGCTAACACACACCTGTGAGCATGAAGAAAATCCAAGCAACCTA +
Preference number: 5 (lower is better)
Translates to: NHQAPIAAPKTLAEC*LTHTCEHEENPSNL
Trigger: TAGGTTGCTTGGATTTTCTTCATGCTCACAGGTGTGTGTTAGTCAACATTCAGCCAGTGTTTTTGGAGCAGCTATGGGTGCCTGGTGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS TCA 90 bp GAGGATTATAATCTCACGGGACCACTGTCATATGTGGTCCATCGCTaGCCCAAAGATGCAGTATGGGACTATATACTATGTCTAAAATGC +
Preference number: 5 (lower is better)
Translates to: EDYNLTGPLSYVVHR*PKDAVWDYILCLKC
Trigger: GCATTTTAGACATAGTATATAGTCCCATACTGCATCTTTGGGTCAGCGATGGACCACATATGACAGTGGTCCCGTGAGATTATAATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS CAA 90 bp ACCTCCGGGGTCCGCAGGCGAGGTGGGCGTGCGGGCCGAGGCGGGTaGGCGAGCCGGGTCGCGAGGCCCACGCAGGCGCCTCAGCCGGGA +
Preference number: 6 (lower is better)
Translates to: TSGVRRRGGRAGRGG*ASRVARPTQAPQPG
Trigger: TCCCGGCTGAGGCGCCTGCGTGGGCCTCGCGACCCGGCTCGCCAACCCGCCTCGGCCCGCACGCCCACCTCGCCTGCGGACCCCGGAGGT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS CCA 72 bp AGTCCGCGTAGGCACCTCCGGGGTCCGCAGGCGAGGTaGGCGTGCGGGCCGAGGCGGGTTGGCGAGCCGGGT +
Preference number: 6 (lower is better)
Translates to: SPRRHLRGPQAR*ACGPRRVGEPG
Trigger: ACCCGGCTCGCCAACCCGCCTCGGCCCGCACGCCCACCTCGCCTGCGGACCCCGGAGGTGCCTACGCGGACT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS GCA 72 bp CCACGCAGGCGCCTCAGCCGGGAAGACGGGGGAAGTTaGCCCGGTTTCCACAGTCCAACCGAGCGCCCCACG +
Preference number: 6 (lower is better)
Translates to: PRRRLSREDGGS*PGFHSPTERPT
Trigger: CGTGGGGCGCTCGGTTGGACTGTGGAAACCGGGGCAACTTCCCCCGTCTTCCCGGCTGAGGCGCCTGCGTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000412770.7
CDS CCA 72 bp CCCCACCCCGGGAGATCCACGGGAGGACGGAAGATTTaGCCGCCGCTGCCGCACCAGGCAGCTATTGGGAGC +
Preference number: 6 (lower is better)
Translates to: PHPGRSTGGRKI*PPLPHQAAIGS
Trigger: GCTCCCAATAGCTGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGGGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587457.1
CDS CAA 72 bp CCCCCACCCCGGGAGATCCACGGGAGGACGGAAGATTaGGCCGCCGCTGCCGCACCAGGCAGCTATTGGGAG +
Preference number: 6 (lower is better)
Translates to: PPPREIHGRTED*AAAAAPGSYWE
Trigger: CTCCCAATAGCTGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCCCGGGGTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587457.1
CDS CAA 90 bp GCGCTCAGGGCACTGGCCAGGAGCTTGACCACGTGCAGCCGCGTGTaGCCCAGAGGCGGAGCCAGCATGCCCCATGTCATCTGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: ALRALARSLTTCSRV*PRGGASMPHVICSG
Trigger: GCCGCTACAGATGACATGGGGCATGCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS TCA 72 bp GCAGCCGCTCCTCACCGCTATCTGGCGGCTCCTGGGTaGCCCAGGCCACCATTGCTTGCAGGTGGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: AAAPHRYLAAPG*PRPPLLAGGVA
Trigger: AGCCACCCCACCTGCAAGCAATGGTGGCCTGGGTCACCCAGGAGCCGCCAGATAGCGGTGAGGAGCGGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS GCA 72 bp TTGGCGCTCAGGGCACTGGCCAGGAGCTTGACCACGTaGAGCCGCGTGTTGCCCAGAGGCGGAGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: LALRALARSLTT*SRVLPRGGASM
Trigger: CATGCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS GCA 72 bp TCTCTTGCTACCTCCCGCGTGGGCGTCACACCTGACTaGCCTCAGCCGGGGCTGGGCTGCTCCCTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: SLATSRVGVTPD*PQPGLGCSLLL
Trigger: AAGGAGGAGGGAGCAGCCCAGCCCCGGCTGAGGGCAGTCAGGTGTGACGCCCACGCGGGAGGTAGCAAGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592242.1
CDS CAA 90 bp TGCGTCAGGGCTGCATCATTGGCGCTCAGGGCACTGGCCAGGAGCTaGACCACGTGCAGCCGCGTGTTGCCCAGAGGCGGAGCCAGCATG +
Preference number: 6 (lower is better)
Translates to: CVRAASLALRALARS*TTCSRVLPRGGASM
Trigger: CATGCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAGCCCTGACGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS CAA 90 bp TTGGGCACGTCCAGTGCCAGGAGCTCGTGCGTCAGGGCTGCATCATaGGCGCTCAGGGCACTGGCCAGGAGCTTGACCACGTGCAGCCGC +
Preference number: 6 (lower is better)
Translates to: LGTSSARSSCVRAAS*ALRALARSLTTCSR
Trigger: GCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAGCCCTGACGCACGAGCTCCTGGCACTGGACGTGCCCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS TCA 72 bp CTGCATCATTGGCGCTCAGGGCACTGGCCAGGAGCTTaGCCACGTGCAGCCGCGTGTTGCCCAGAGGCGGAG +
Preference number: 6 (lower is better)
Translates to: LHHWRSGHWPGA*PRAAACCPEAE
Trigger: CTCCGCCTCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS GCA 72 bp TCTGGCGGCTCCTGGGTGACCCAGGCCACCATTGCTTaGAGGTGGGGTGGCTGCAGCAGGAAGTCCAGCAGC +
Preference number: 6 (lower is better)
Translates to: SGGSWVTQATIA*RWGGCSRKSSS
Trigger: GCTGCTGGACTTCCTGCTGCAGCCACCCCACCTGCAAGCAATGGTGGCCTGGGTCACCCAGGAGCCGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS GCA 72 bp AGCTGGTGGAAGCAGCTGAGCCGCGGGCGTAGGGCGTaGAAGGCGCCCACACTGGACACAGTGCTTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SWWKQLSRGRRA*KAPTLDTVLSR
Trigger: CCTGGAAAGCACTGTGTCCAGTGTGGGCGCCTTGCACGCCCTACGCCCGCGGCTCAGCTGCTTCCACCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
ENST00000591602.1
CDS GCA 72 bp CGTGCAGCCGCGTGTTGCCCAGAGGCGGAGCCAGCATaGCCCATGTCATCTGTAGCGGCTCCAGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: RAAACCPEAEPA*PMSSVAAPAWE
Trigger: CTCCCAAGCTGGAGCCGCTACAGATGACATGGGGCATGCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS GCA 72 bp GGAGATCCACGGGAGGACGGAAGATTTGGCCGCCGCTaGCGCACCAGGCAGCTATTGGGAGCCTGGGGATGC +
Preference number: 6 (lower is better)
Translates to: GDPREDGRFGRR*RTRQLLGAWGC
Trigger: GCATCCCCAGGCTCCCAATAGCTGCCTGGTGCGGCAGCGGCGGCCAAATCTTCCGTCCTCCCGTGGATCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587457.1
CDS CCA 72 bp GCCCTGCCGTGTGGTGGAAGCTTGGAGAAGGGAAACTaGAGGGGGACTCACCGGACACCAGGTGGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: ALPCGGSLEKGN*RGTHRTPGGWP
Trigger: GGGCCAGCCACCTGGTGTCCGGTGAGTCCCCCTCCAGTTTCCCTTCTCCAAGCTTCCACCACACGGCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586690.1
CDS CAA 72 bp GCACTGGCCAGGAGCTTGACCACGTGCAGCCGCGTGTaGCCCAGAGGCGGAGCCAGCATGCCCCATGTCATC +
Preference number: 6 (lower is better)
Translates to: ALARSLTTCSRV*PRGGASMPHVI
Trigger: GATGACATGGGGCATGCTGGCTCCGCCTCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS CAA 72 bp GCTGCATCATTGGCGCTCAGGGCACTGGCCAGGAGCTaGACCACGTGCAGCCGCGTGTTGCCCAGAGGCGGA +
Preference number: 6 (lower is better)
Translates to: AASLALRALARS*TTCSRVLPRGG
Trigger: TCCGCCTCTGGGCAACACGCGGCTGCACGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS CAA 90 bp AGCTATTGGGAGCCTGGGGATGCAGGCCCTTCCGGGGCAGAGCCATaGGGTATCGGAGGAGGCGTGAGGGCCTGGGCACTCTGGCTTTGG +
Preference number: 6 (lower is better)
Translates to: SYWEPGDAGPSGAEP*GIGGGVRAWALWLW
Trigger: CCAAAGCCAGAGTGCCCAGGCCCTCACGCCTCCTCCGATACCCAATGGCTCTGCCCCGGAAGGGCCTGCATCCCCAGGCTCCCAATAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000587457.1
CDS CCA 72 bp AAAACATGGCGCCCTCATCTCTTGCTACCTCCCGCGTaGGCGTCACACCTGACTGCCCTCAGCCGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: KTWRPHLLLPPA*ASHLTALSRGW
Trigger: CCAGCCCCGGCTGAGGGCAGTCAGGTGTGACGCCCACGCGGGAGGTAGCAAGAGATGAGGGCGCCATGTTTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592242.1
CDS CAA 72 bp TCCAGTGCCAGGAGCTCGTGCGTCAGGGCTGCATCATaGGCGCTCAGGGCACTGGCCAGGAGCTTGACCACG +
Preference number: 6 (lower is better)
Translates to: SSARSSCVRAAS*ALRALARSLTT
Trigger: CGTGGTCAAGCTCCTGGCCAGTGCCCTGAGCGCCAATGATGCAGCCCTGACGCACGAGCTCCTGGCACTGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS TCA 72 bp GGGCCCTCTGCAGCCTGGTGCTGGGAGCCCCTCCCATaGGCTGACCATCCAGGGAAAAATGGTCACCCAGAC +
Preference number: 6 (lower is better)
Translates to: GPSAAWCWEPLP*ADHPGKNGHPD
Trigger: GTCTGGGTGACCATTTTTCCCTGGATGGTCAGCTCATGGGAGGGGCTCCCAGCACCAGGCTGCAGAGGGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS TCA 72 bp ATGCGTTGGAATGTTGCTGGAACGGGGAGAGACAGGTaGGGATCCTGGTCGGGCCACCGGGCCCTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: MRWNVAGTGRDR*GSWSGHRALCS
Trigger: GCTGCAGAGGGCCCGGTGGCCCGACCAGGATCCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS GCA 72 bp GTGACCCAGGCCACCATTGCTTGCAGGTGGGGTGGCTaGAGCAGGAAGTCCAGCAGCTTGCGGTTGACGACC +
Preference number: 6 (lower is better)
Translates to: VTQATIACRWGG*SRKSSSLRLTT
Trigger: GGTCGTCAACCGCAAGCTGCTGGACTTCCTGCTGCAGCCACCCCACCTGCAAGCAATGGTGGCCTGGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS GCA 72 bp AGCATGGTGTTGGGCACGTCCAGTGCCAGGAGCTCGTaGGTCAGGGCTGCATCATTGGCGCTCAGGGCACTG +
Preference number: 6 (lower is better)
Translates to: SMVLGTSSARSS*VRAASLALRAL
Trigger: CAGTGCCCTGAGCGCCAATGATGCAGCCCTGACGCACGAGCTCCTGGCACTGGACGTGCCCAACACCATGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS GCA 72 bp AGCCAACGGCAAGAACACAGGCGGGCAGGGACAGAATaGGGCCGTAAGGAGACCGTCCGTCGCCAGTCATCC +
Preference number: 6 (lower is better)
Translates to: SQRQEHRRAGTE*GRKETVRRQSS
Trigger: GGATGACTGGCGACGGACGGTCTCCTTACGGCCGCATTCTGTCCCTGCCCGCCTGTGTTCTTGCCGTTGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS GCA 72 bp CAGCTGCAGGCTGAGCCCACAGGGCATGTAGGTGCGTaGAGGGGACAGATACAAGTAGGCGCGCCTGCTGCT +
Preference number: 6 (lower is better)
Translates to: QLQAEPTGHVGA*RGQIQVGAPAA
Trigger: AGCAGCAGGCGCGCCTACTTGTATCTGTCCCCTGCACGCACCTACATGCCCTGTGGGCTCAGCCTGCAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589343.1
CDS CCA 72 bp AGGGTGGCCAGCAGTTGGTCAGGCTCTGGGCTGTCCTaGACTTGGATCATCTGCTCCCGGCTCAGGCGGATG +
Preference number: 6 (lower is better)
Translates to: RVASSWSGSGLS*TWIICSRLRRM
Trigger: CATCCGCCTGAGCCGGGAGCAGATGATCCAAGTCCAGGACAGCCCAGAGCCTGACCAACTGCTGGCCACCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591602.1
CDS CCA 72 bp CTCCTGCCCCAGAAACCACCTCGTCAGCTAGCTGTGTaGGACAGACCGGCCGACACCCATCCTGTTCCCTGC +
Preference number: 6 (lower is better)
Translates to: LLPQKPPRQLAV*DRPADTHPVPC
Trigger: GCAGGGAACAGGATGGGTGTCGGCCGGTCTGTCCCACACAGCTAGCTGACGAGGTGGTTTCTGGGGCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS GCA 72 bp AAGTCCAGCAGCTTGCGGTTGACGACCTTGCACTCCTaGAGCACGTCTTCCTCGTCCAGCAGCTCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: KSSSLRLTTLHS*STSSSSSSSGR
Trigger: CCTGCCCGAGCTGCTGGACGAGGAAGACGTGCTGCAGGAGTGCAAGGTCGTCAACCGCAAGCTGCTGGACTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS CAA 72 bp GAGGGACCCGCTCTGTGTCCCCAGCACAGAAGATGTTaGTGCCCCACCCTCATGGCCTGCCTCTCGGAGAGA +
Preference number: 6 (lower is better)
Translates to: EGPALCPQHRRC*CPTLMACLSER
Trigger: TCTCTCCGAGAGGCAGGCCATGAGGGTGGGGCACAAACATCTTCTGTGCTGGGGACACAGAGCGGGTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589343.1
CDS CAA 90 bp GCTCAGGCGGATGATGTCACACAGGGACTGGGATGCGTTGGAATGTaGCTGGAACGGGGAGAGACAGGTGAGGATCCTGGTCGGGCCACC +
Preference number: 6 (lower is better)
Translates to: AQADDVTQGLGCVGM*LERGETGEDPGRAT
Trigger: GGTGGCCCGACCAGGATCCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS GCA 72 bp GAAGAAGAGGTCCAGCATGGTGTTGGGCACGTCCAGTaGCAGGAGCTCGTGCGTCAGGGCTGCATCATTGGC +
Preference number: 6 (lower is better)
Translates to: EEEVQHGVGHVQ*QELVRQGCIIG
Trigger: GCCAATGATGCAGCCCTGACGCACGAGCTCCTGGCACTGGACGTGCCCAACACCATGCTGGACCTCTTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS GCA 72 bp GGACCCGCTCTGTGTCCCCAGCACAGAAGATGTTTGTaGCCCACCCTCATGGCCTGCCTCTCGGAGAGAAGA +
Preference number: 6 (lower is better)
Translates to: GPALCPQHRRCL*PTLMACLSERR
Trigger: TCTTCTCTCCGAGAGGCAGGCCATGAGGGTGGGGCACAAACATCTTCTGTGCTGGGGACACAGAGCGGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589343.1
CDS CAA 90 bp GACACGAGCTGGTCTGTCTTGCGGTTGATGAGGATGCCCATGACCTaGCTGAAGAAGCTGGCCAGCAGTGGGTTGAGGCTGCCGGTGCTC +
Preference number: 6 (lower is better)
Translates to: DTSWSVLRLMRMPMT*LKKLASSGLRLPVL
Trigger: GAGCACCGGCAGCCTCAACCCACTGCTGGCCAGCTTCTTCAGCAAGGTCATGGGCATCCTCATCAACCGCAAGACAGACCAGCTCGTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS CAA 90 bp TGCTCCCGGCTCAGGCGGATGATGTCACACAGGGACTGGGATGCGTaGGAATGTTGCTGGAACGGGGAGAGACAGGTGAGGATCCTGGTC +
Preference number: 6 (lower is better)
Translates to: CSRLRRMMSHRDWDA*ECCWNGERQVRILV
Trigger: GACCAGGATCCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAGCCGGGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS CAA 90 bp ATCCCACTGACGATGACAGACTGGCTCTGCTCCCCCTCGAACATGTaGCTTAAGAGCTGCTCAATCGTCTCCTGCCTGCGGGGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: IPLTMTDWLCSPSNM*LKSCSIVSCLRGQG
Trigger: CCCCTGCCCCCGCAGGCAGGAGACGATTGAGCAGCTCTTAAGCAACATGTTCGAGGGGGAGCAGAGCCAGTCTGTCATCGTCAGTGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000591323.5
CDS CAA 90 bp AGCTTGTGTGCAGGTCAAACTTCCAAAACATGGCGCCCTCATCTCTaGCTACCTCCCGCGTGGGCGTCACACCTGACTGCCCTCAGCCGG +
Preference number: 6 (lower is better)
Translates to: SLCAGQTSKTWRPHL*LPPAWASHLTALSR
Trigger: CCGGCTGAGGGCAGTCAGGTGTGACGCCCACGCGGGAGGTAGCAAGAGATGAGGGCGCCATGTTTTGGAAGTTTGACCTGCACACAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592242.1
CDS GCA 72 bp CGCAGCAGGAGGTCCATGATGGCCGAGGTGCCAATGTaGTGCAGCAGCAGGTCCACGAAGTCATCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: RSRRSMMAEVPM*CSSRSTKSSFF
Trigger: GAAGAAGGATGACTTCGTGGACCTGCTGCTGCAGCACATTGGCACCTCGGCCATCATGGACCTCCTGCTGCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587283.5
CDS GCA 72 bp GTTTCACAACAGGGTTTTGGATGGGCGTCTCAGGGCTaGTGTCAGGAGGTGGCCCCAAGCTCAGCATGGTGC +
Preference number: 6 (lower is better)
Translates to: VSQQGFGWASQG*CQEVAPSSAWC
Trigger: GCACCATGCTGAGCTTGGGGCCACCTCCTGACAGCAGCCCTGAGACGCCCATCCAAAACCCTGTTGTGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS CCA 72 bp GGTGCGAGCTTGTGTGCAGGTCAAACTTCCAAAACATaGCGCCCTCATCTCTTGCTACCTCCCGCGTGGGCG +
Preference number: 6 (lower is better)
Translates to: GASLCAGQTSKT*RPHLLLPPAWA
Trigger: CGCCCACGCGGGAGGTAGCAAGAGATGAGGGCGCCATGTTTTGGAAGTTTGACCTGCACACAAGCTCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592242.1
CDS CCA 72 bp GGTGCGAGCTTGTGTGCAGGTCAAACTTCCAAAACATaGCGCCCTGCAGGCATAGACACAACCAGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: GASLCAGQTSKT*RPAGIDTTSAA
Trigger: CGCGGCGCTGGTTGTGTCTATGCCTGCAGGGCGCCATGTTTTGGAAGTTTGACCTGCACACAAGCTCGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587283.5
CDS CAA 72 bp TGGTGGGTGTTCACCAGGTCCACCATGTTCTTCTTGTaGGTCTCCGCCAGGGGCCCCGATACGAAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: WWVFTRSTMFFL*VSARGPDTKAS
Trigger: GGAAGCCTTCGTATCGGGGCCCCTGGCGGAGACCAACAAGAAGAACATGGTGGACCTGGTGAACACCCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587283.5
CDS CAA 72 bp GCAGGTCAAACTTCCAAAACATGGCGCCCTCATCTCTaGCTACCTCCCGCGTGGGCGTCACACCTGACTGCC +
Preference number: 6 (lower is better)
Translates to: AGQTSKTWRPHL*LPPAWASHLTA
Trigger: GGCAGTCAGGTGTGACGCCCACGCGGGAGGTAGCAAGAGATGAGGGCGCCATGTTTTGGAAGTTTGACCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592242.1
CDS CAA 90 bp ATGAAGGCCTGCTGCAGCACAGCCTCCTCAGGGAAGTTGAACTCCTaGAGCCGGTCGTCCTCATCGTCACTGGAGGAGTGTAGGTGGTGG +
Preference number: 6 (lower is better)
Translates to: MKACCSTASSGKLNS*SRSSSSSLEECRWW
Trigger: CCACCACCTACACTCCTCCAGTGACGATGAGGACGACCGGCTCAAGGAGTTCAACTTCCCTGAGGAGGCTGTGCTGCAGCAGGCCTTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000589343.1
CDS CAA 90 bp TGGAAGTCCATGAAGGCCTGCTGCAGCACAGCCTCCTCAGGGAAGTaGAACTCCTTGAGCCGGTCGTCCTCATCGTCACTGGAGGAGTGT +
Preference number: 6 (lower is better)
Translates to: WKSMKACCSTASSGK*NSLSRSSSSSLEEC
Trigger: ACACTCCTCCAGTGACGATGAGGACGACCGGCTCAAGGAGTTCAACTTCCCTGAGGAGGCTGTGCTGCAGCAGGCCTTCATGGACTTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000589343.1
CDS GCA 72 bp AGCAGGAGGTCCATGATGGCCGAGGTGCCAATGTGCTaGAGCAGCAGGTCCACGAAGTCATCCTTCTTCCGA +
Preference number: 6 (lower is better)
Translates to: SRRSMMAEVPMC*SSRSTKSSFFR
Trigger: TCGGAAGAAGGATGACTTCGTGGACCTGCTGCTGCAGCACATTGGCACCTCGGCCATCATGGACCTCCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587283.5
CDS GCA 72 bp CTTGTGTGCAGGTCAAACTTCCAAAACATGGCGCCCTaGAGGCATAGACACAACCAGCGCCGCGTCAGACGC +
Preference number: 6 (lower is better)
Translates to: LVCRSNFQNMAP*RHRHNQRRVRR
Trigger: GCGTCTGACGCGGCGCTGGTTGTGTCTATGCCTGCAGGGCGCCATGTTTTGGAAGTTTGACCTGCACACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587283.5
CDS CAA 72 bp ATGAAGGCCTGCTGCAGCACAGCCTCCTCAGGGAAGTaGAACTCCTTGAGCCGGTCGTCCTCATCGTCACTG +
Preference number: 6 (lower is better)
Translates to: MKACCSTASSGK*NSLSRSSSSSL
Trigger: CAGTGACGATGAGGACGACCGGCTCAAGGAGTTCAACTTCCCTGAGGAGGCTGTGCTGCAGCAGGCCTTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000589343.1
CDS CAA 72 bp CTCAGGCGGATGATGTCACACAGGGACTGGGATGCGTaGGAATGTTGCTGGAACGGGGAGAGACAGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LRRMMSHRDWDA*ECCWNGERQVR
Trigger: CCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCATCCGCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS CCA 72 bp GTCAGCAGCACCTGGATCCCACTGACGATGACAGACTaGCTCTGCTCCCCCTCGAACATGTTGCTTAAGAGC +
Preference number: 6 (lower is better)
Translates to: VSSTWIPLTMTD*LCSPSNMLLKS
Trigger: GCTCTTAAGCAACATGTTCGAGGGGGAGCAGAGCCAGTCTGTCATCGTCAGTGGGATCCAGGTGCTGCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
ENST00000591602.1
CDS CCA 72 bp AAGTGGTCAATGAAGGCAGAGGTCATGCGCTGCATCTaGAAGTCCATGAAGGCCTGCTGCAGCACAGCCTCC +
Preference number: 6 (lower is better)
Translates to: KWSMKAEVMRCI*KSMKACCSTAS
Trigger: GGAGGCTGTGCTGCAGCAGGCCTTCATGGACTTCCAGATGCAGCGCATGACCTCTGCCTTCATTGACCACTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000589343.1
CDS CAA 72 bp ACGATGACAGACTGGCTCTGCTCCCCCTCGAACATGTaGCTTAAGAGCTGCTCAATCGTCTCCTGCCTGCGG +
Preference number: 6 (lower is better)
Translates to: TMTDWLCSPSNM*LKSCSIVSCLR
Trigger: CCGCAGGCAGGAGACGATTGAGCAGCTCTTAAGCAACATGTTCGAGGGGGAGCAGAGCCAGTCTGTCATCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591323.5
CDS TCA 72 bp ATCAGCACCCAGGGCATCATTGATCTGGGGCACATCTaGGGTCAGAATCTCGCAGGCCACACTGGGGTACTT +
Preference number: 6 (lower is better)
Translates to: ISTQGIIDLGHI*GQNLAGHTGVL
Trigger: AAGTACCCCAGTGTGGCCTGCGAGATTCTGACCTCAGATGTGCCCCAGATCAATGATGCCCTGGGTGCTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS GCA 72 bp AAGCCGAAGTGGTCAATGAAGGCAGAGGTCATGCGCTaGATCTGGAAGTCCATGAAGGCCTGCTGCAGCACA +
Preference number: 6 (lower is better)
Translates to: KPKWSMKAEVMR*IWKSMKACCST
Trigger: TGTGCTGCAGCAGGCCTTCATGGACTTCCAGATGCAGCGCATGACCTCTGCCTTCATTGACCACTTCGGCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000589343.1
CDS GCA 72 bp ATGATGTCACACAGGGACTGGGATGCGTTGGAATGTTaGTGGAACGGGGAGAGACAGGTGAGGATCCTGGTC +
Preference number: 6 (lower is better)
Translates to: MMSHRDWDALEC*WNGERQVRILV
Trigger: GACCAGGATCCTCACCTGTCTCTCCCCGTTCCAGCAACATTCCAACGCATCCCAGTCCCTGTGTGACATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591602.1
CDS CAA 72 bp CGGTTCAGAAGGGACTCATCAGCACCCAGGGCATCATaGATCTGGGGCACATCTGAGGTCAGAATCTCGCAG +
Preference number: 6 (lower is better)
Translates to: RFRRDSSAPRAS*IWGTSEVRISQ
Trigger: CTGCGAGATTCTGACCTCAGATGTGCCCCAGATCAATGATGCCCTGGGTGCTGATGAGTCCCTTCTGAACCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS CAA 72 bp ACGATGACAGACTGGCTCTGCTCCCCCTCGAACATGTaGCTTAAGAGCTGCTCAATCGTCTCCTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: TMTDWLCSPSNM*LKSCSIVSCFS
Trigger: GGAGAAGCAGGAGACGATTGAGCAGCTCTTAAGCAACATGTTCGAGGGGGAGCAGAGCCAGTCTGTCATCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591602.1
CDS CAA 90 bp TTGGCGTTGGGGTTCTCATCGTCAGCATTGAGGGAGAAGGTGATGTaGGCTGTCTTGTCAAAAGGTGCGTTCACACTCTCCTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: LALGFSSSALREKVM*AVLSKGAFTLSSCS
Trigger: GGAGCAGGAGGAGAGTGTGAACGCACCTTTTGACAAGACAGCCAACATCACCTTCTCCCTCAATGCTGACGATGAGAACCCCAACGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000586690.1
ENST00000587283.5
CDS CCA 72 bp TCATCCTTCGACGGGTGGATCTGCTCAATCAGCCGCTaGACGATCTTCTCCTCGTTGAGCCAATTGACAACA +
Preference number: 6 (lower is better)
Translates to: SSFDGWICSISR*TIFSSLSQLTT
Trigger: TGTTGTCAATTGGCTCAACGAGGAGAAGATCGTCCAGCGGCTGATTGAGCAGATCCACCCGTCGAAGGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000412770.7
ENST00000587283.5
CDS CCA 72 bp CTCTCCCTCCAACTAGAAACTCCAAGAAGGCAGAGATaGCTGAGTTTTGCCACTGCTGTATCCTCAGCCCTG +
Preference number: 6 (lower is better)
Translates to: LSLQLETPRRQR*LSFATAVSSAL
Trigger: CAGGGCTGAGGATACAGCAGTGGCAAAACTCAGCCATCTCTGCCTTCTTGGAGTTTCTAGTTGGAGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS CAA 72 bp TTCCGAAGAAAGGACACGAGCTGGTCTGTCTTGCGGTaGATGAGGATGCCCATGACCTTGCTGAAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: FRRKDTSWSVLR*MRMPMTLLKKL
Trigger: CAGCTTCTTCAGCAAGGTCATGGGCATCCTCATCAACCGCAAGACAGACCAGCTCGTGTCCTTTCTTCGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000592242.1
CDS CAA 72 bp TCGTCAGCATTGAGGGAGAAGGTGATGTTGGCTGTCTaGTCAAAAGGTGCGTTCACACTCTCCTCCTGCTCC +
Preference number: 6 (lower is better)
Translates to: SSALREKVMLAV*SKGAFTLSSCS
Trigger: GGAGCAGGAGGAGAGTGTGAACGCACCTTTTGACAAGACAGCCAACATCACCTTCTCCCTCAATGCTGACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000586690.1
ENST00000587283.5
CDS CAA 90 bp AGGAGGTGGCCCCAAGCTCAGCATGGTGCTCACGCATCCCTCTACTaGGGCATGCAAGAAGTTGTTGAAGACATAATGGAAGAAGAGGTC +
Preference number: 6 (lower is better)
Translates to: RRWPQAQHGAHASLY*GMQEVVEDIMEEEV
Trigger: GACCTCTTCTTCCATTATGTCTTCAACAACTTCTTGCATGCCCAAGTAGAGGGATGCGTGAGCACCATGCTGAGCTTGGGGCCACCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS CAA 72 bp GGGTTCTCATCGTCAGCATTGAGGGAGAAGGTGATGTaGGCTGTCTTGTCAAAAGGTGCGTTCACACTCTCC +
Preference number: 6 (lower is better)
Translates to: GFSSSALREKVM*AVLSKGAFTLS
Trigger: GGAGAGTGTGAACGCACCTTTTGACAAGACAGCCAACATCACCTTCTCCCTCAATGCTGACGATGAGAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000586690.1
ENST00000587283.5
CDS GCA 72 bp ACTAGAAACTCCAAGAAGGCAGAGATGGCTGAGTTTTaGCACTGCTGTATCCTCAGCCCTGAGAAACCACCA +
Preference number: 6 (lower is better)
Translates to: TRNSKKAEMAEF*HCCILSPEKPP
Trigger: TGGTGGTTTCTCAGGGCTGAGGATACAGCAGTGGCAAAACTCAGCCATCTCTGCCTTCTTGGAGTTTCTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS CAA 72 bp CCCCAAGCTCAGCATGGTGCTCACGCATCCCTCTACTaGGGCATGCAAGAAGTTGTTGAAGACATAATGGAA +
Preference number: 6 (lower is better)
Translates to: PQAQHGAHASLY*GMQEVVEDIME
Trigger: TTCCATTATGTCTTCAACAACTTCTTGCATGCCCAAGTAGAGGGATGCGTGAGCACCATGCTGAGCTTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS TCA 72 bp TCACGCATCCCTCTACTTGGGCATGCAAGAAGTTGTTaGAGACATAATGGAAGAAGAGGTCCAGCATGGTGT +
Preference number: 6 (lower is better)
Translates to: SRIPLLGHARSC*RHNGRRGPAWC
Trigger: ACACCATGCTGGACCTCTTCTTCCATTATGTCTTCAACAACTTCTTGCATGCCCAAGTAGAGGGATGCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000412770.7
ENST00000587283.5
ENST00000591323.5
CDS TCA 72 bp AATCTCACGGGACCACTGTCATATGTGGTCCATCGCTaGCCCAAAGATGCAGTATGGGACTATATACTATGT +
Preference number: 6 (lower is better)
Translates to: NLTGPLSYVVHR*PKDAVWDYILC
Trigger: ACATAGTATATAGTCCCATACTGCATCTTTGGGTCAGCGATGGACCACATATGACAGTGGTCCCGTGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587457.1
CDS TCA 72 bp GCACCCATAGCTGCTCCAAAAACACTGGCTGAATGTTaGCTAACACACACCTGTGAGCATGAAGAAAATCCA +
Preference number: 6 (lower is better)
Translates to: APIAAPKTLAEC*LTHTCEHEENP
Trigger: TGGATTTTCTTCATGCTCACAGGTGTGTGTTAGTCAACATTCAGCCAGTGTTTTTGGAGCAGCTATGGGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587457.1