Pregenerated sensors for PPP4R3B-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272606Ensembl transcript IDs: ENST00000608113.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAAGCGCTCTGCAAGAAACAGGAAATCGTCAACACACTTTCTGCATaGATTGCCTGGAGAGTTGTGTCCATAGACAATTCCTGGTTAGAT | + |
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Preference number: 5 (lower is better) Translates to: EALCKKQEIVNTLSA*IAWRVVSIDNSWLD Trigger: ATCTAACCAGGAATTGTCTATGGACACAACTCTCCAGGCAATTCATGCAGAAAGTGTGTTGACGATTTCCTGTTTCTTGCAGAGCGCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608113.1 |
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| CDS GCA 90 bp | ATGAATTGCCTGGAGAGTTGTGTCCATAGACAATTCCTGGTTAGATaGTTAATTGTAGCAGACTCCATAACGGGGTTTAGCGGGTTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: MNCLESCVHRQFLVR*LIVADSITGFSGFP Trigger: TGGAAACCCGCTAAACCCCGTTATGGAGTCTGCTACAATTAAGCATCTAACCAGGAATTGTCTATGGACACAACTCTCCAGGCAATTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608113.1 |
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| CDS GCA 72 bp | TCGCCAGCTACTAAGAGCCTTAACGGTGAAGCGCTCTaGAAGAAACAGGAAATCGTCAACACACTTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPATKSLNGEAL*KKQEIVNTLSA Trigger: TGCAGAAAGTGTGTTGACGATTTCCTGTTTCTTGCAGAGCGCTTCACCGTTAAGGCTCTTAGTAGCTGGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000608113.1 |
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| CDS TCA 72 bp | GGTTTAAACTTATTTTTCCTCCTCAGGCGGACGAAGTaGGCGTCGTTCCGTGAAGGTATGAAACCCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GLNLFFLLRRTK*ASFREGMKPFS Trigger: GGAAAAGGGTTTCATACCTTCACGGAACGACGCTCACTTCGTCCGCCTGAGGAGGAAAAATAAGTTTAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000608113.1 |
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| CDS GCA 72 bp | CTGGAGAGTTGTGTCCATAGACAATTCCTGGTTAGATaGTTAATTGTAGCAGACTCCATAACGGGGTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LESCVHRQFLVR*LIVADSITGFS Trigger: GCTAAACCCCGTTATGGAGTCTGCTACAATTAAGCATCTAACCAGGAATTGTCTATGGACACAACTCTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000608113.1 |
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