Pregenerated sensors for PPP4R2 (Homo sapiens)
Ensembl gene IDs: ENSG00000163605Ensembl transcript IDs: ENST00000356692.10, ENST00000495566.1
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACATGCCTATCTACACCGGCAAAACAAAATACTCTGAATCTCAATaGTTTAACAAGCCACACCTTCTGGCCGAGGATTTCTGGGATGCC | + |
|
Preference number: 1 (lower is better) Translates to: YMPIYTGKTKYSESQ*FNKPHLLAEDFWDA Trigger: GGCATCCCAGAAATCCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTTTGCCGGTGTAGATAGGCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR TCA 90 bp | CTGCGGAAATTTACTTCCAAATGGCCATCAATATCTAAAACCAGCTaGACAAGGTTTCCCAATTTAACTACAGAAGTATTCCACCTACCC | + |
|
Preference number: 1 (lower is better) Translates to: LRKFTSKWPSISKTS*TRFPNLTTEVFHLP Trigger: GGGTAGGTGGAATACTTCTGTAGTTAAATTGGGAAACCTTGTTCAGCTGGTTTTAGATATTGATGGCCATTTGGAAGTAAATTTCCGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR-3UTR CCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGCCAAGCCACAGGGCCTaGCTGGCAATTCCACTACTC | + |
|
Preference number: 2 (lower is better) Translates to: KQNTLNLNALTSHTFWPRPSHRA*LAIPLL Trigger: GAGTAGTGGAATTGCCAGCCAGGCCCTGTGGCTTGG...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCCTGGCTGGCAATTCCACTACTCCAAAACACACGTCTGAAAGGTGTAGTTGTGTCAGAAACTGTTTaGATCAGTTTTAGAAGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: RAWLAIPLLQNTRLKGVVVSETV*ISFRSS Trigger: TGAGCTTCTAAAACTGATGCAAACAGTTTCTGACAC...AACTACACCTTTCAGACGTGTGTTTTGGAGTAGTGGAATTGCCAGCCAGGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGCGCAAAACTTGTGGTTaGCCCCCAAATCACCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KQNTLNLNALTSHTFWPRRKTCG*PPNHPK Trigger: TTTTGGGTGATTTGGGGGGCAACCACAAGTTTTGCG...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR-3UTR GCA 90 bp | AGGGCCTGGCTGGCAATTCCACTACTCCAAAACACACGTCTGAAAGGTGTAGTTGCACCTATGAATACCTaGGGAAATTTACTTCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: RAWLAIPLLQNTRLKGVVAPMNT*GNLLPN Trigger: ATTTGGAAGTAAATTTCCGCAGGTATTCATAGGTGC...AACTACACCTTTCAGACGTGTGTTTTGGAGTAGTGGAATTGCCAGCCAGGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR-3UTR TCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGCCTACTTGGTTCTTCTaGGATGGTCTCATATCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: KQNTLNLNALTSHTFWPRPTWFF*DGLISA Trigger: AGCTGATATGAGACCATCTCAGAAGAACCAAGTAGG...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGAAAGTCTGTGTTAAGTaGACCTATGAATACCTGCGG | + |
|
Preference number: 2 (lower is better) Translates to: KQNTLNLNALTSHTFWPRKVCVK*TYEYLR Trigger: CCGCAGGTATTCATAGGTGCACTTAACACAGACTTT...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR CCA 72 bp | ACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTaGCCGAGGATTTCTGGGATGCCTTTCCAAGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: TLNLNALTSHTF*PRISGMPFQAT Trigger: TGTGGCTTGGAAAGGCATCCCAGAAATCCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGGCCTGGCTGGCAATTCCACTACTCCAAAACACACGTCTGAAAGGTGTAGTTCAGGGAAGTTACAGCTaGCATGACTTTAAATATGTA | + |
|
Preference number: 3 (lower is better) Translates to: RAWLAIPLLQNTRLKGVVQGSYS*HDFKYV Trigger: TACATATTTAAAGTCATGCAAGCTGTAACTTCCCTG...AACTACACCTTTCAGACGTGTGTTTTGGAGTAGTGGAATTGCCAGCCAGGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR GCA 72 bp | ATCTACACCGGCAAAACAAAATACTCTGAATCTCAATaGTTTAACAAGCCACACCTTCTGGCCGAGGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: IYTGKTKYSESQ*FNKPHLLAEDF Trigger: GAAATCCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTTTGCCGGTGTAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGTGGATCCAAATCGTTTaGGTATTTATAGCCATGATG | + |
|
Preference number: 3 (lower is better) Translates to: KQNTLNLNALTSHTFWPRWIQIV*VFIAMM Trigger: CATCATGGCTATAAATACCAAAACGATTTGGATCCA...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTGGCTGGCAATTCCACTACTCCAAAACACACGTCTGAAAGGTGTAGTTCCAAGCCACAGGGCCTaGCTGGCAATTCCACTACTC | + |
|
Preference number: 4 (lower is better) Translates to: RAWLAIPLLQNTRLKGVVPSHRA*LAIPLL Trigger: GAGTAGTGGAATTGCCAGCCAGGCCCTGTGGCTTGG...AACTACACCTTTCAGACGTGTGTTTTGGAGTAGTGGAATTGCCAGCCAGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTGGCTGGCAATTCCACTACTCCAAAACACACGTCTGAAAGGTGTAGTTGCCACAGGGCCTGGCTaGCAATTCCACTACTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RAWLAIPLLQNTRLKGVVATGPG*QFHYSK Trigger: TTTGGAGTAGTGGAATTGCCAGCCAGGCCCTGTGGC...AACTACACCTTTCAGACGTGTGTTTTGGAGTAGTGGAATTGCCAGCCAGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTGGCTGGCAATTCCACTACTCCAAAACACACGTCTGAAAGGTGTAGTTCTGGCCGAGGATTTCTaGGATGCCTTTCCAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RAWLAIPLLQNTRLKGVVLAEDF*DAFPSH Trigger: GTGGCTTGGAAAGGCATCCCAGAAATCCTCGGCCAG...AACTACACCTTTCAGACGTGTGTTTTGGAGTAGTGGAATTGCCAGCCAGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGGAGCCGGGGGAAGCGTaGGAGAGAGCAAGACCGACA | + |
|
Preference number: 4 (lower is better) Translates to: KQNTLNLNALTSHTFWPREPGEA*ERARPT Trigger: TGTCGGTCTTGCTCTCTCGCACGCTTCCCCCGGCTC...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGCGAGGATTTCTGGGATaGCTTTCCAAGCCACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQNTLNLNALTSHTFWPRRGFLG*LSKPQG Trigger: GCCCTGTGGCTTGGAAAGGCATCCCAGAAATCCTCG...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGTCCTCTTCTGTACAGTaGTGCCGGGTACAACGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KQNTLNLNALTSHTFWPRSSSVQ*CRVQRL Trigger: TAGCCGTTGTACCCGGCAGCACTGTACAGAAGAGGA...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGACAAGCCACACCTTCTaGCCGAGGATTTCTGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KQNTLNLNALTSHTFWPRTSHTF*PRISGM Trigger: CATCCCAGAAATCCTCGGCCAGAAGGTGTGGCTTGT...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGTCTTCTGTACAGTGCTaGCGGGTACAACGGCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: KQNTLNLNALTSHTFWPRSSVQC*RVQRLS Trigger: AGATAGCCGTTGTACCCGGCAGCACTGTACAGAAGA...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR GCA 90 bp | AGGGCCTGGCTGGCAATTCCACTACTCCAAAACACACGTCTGAAAGGTGTAGTTAAATGCATAAATACATaGCTATCTACACCGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RAWLAIPLLQNTRLKGVVKCINT*LSTPAK Trigger: TTTTGCCGGTGTAGATAGGCATGTATTTATGCATTT...AACTACACCTTTCAGACGTGTGTTTTGGAGTAGTGGAATTGCCAGCCAGGCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATACTCTGAATCTCAATGCTTTAACAAGCCACACCTTCTGGCCGAGGTACTCTGAATCTCAATaGTTTAACAAGCCACACCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQNTLNLNALTSHTFWPRYSESQ*FNKPHL Trigger: AAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTA...CCTCGGCCAGAAGGTGTGGCTTGTTAAAGCATTGAGATTCAGAGTATTTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS TCA 90 bp | GTAGATCACGAGGTCAGGAGATCGAGACCGTCCTGGCTAACATGGTaGAACCCCGTCTCTAATCTGCAATCCCCGCAGTTTGGGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VDHEVRRSRPSWLTW*NPVSNLQSPQFGKL Trigger: CAACTTCCCAAACTGCGGGGATTGCAGATTAGAGACGGGGTTTCACCATGTTAGCCAGGACGGTCTCGATCTCCTGACCTCGTGATCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495566.1 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTGGCTGGCAATTCCACTACTCCAAAACACACGTCTGAAAGGTGTAGTTTGGATCCAAATCGTTTaGGTATTTATAGCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RAWLAIPLLQNTRLKGVVWIQIV*VFIAMM Trigger: CATCATGGCTATAAATACCAAAACGATTTGGATCCA...AACTACACCTTTCAGACGTGTGTTTTGGAGTAGTGGAATTGCCAGCCAGGCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000356692.10 |
||
| CDS CAA 90 bp | AATCTGCAATCCCCGCAGTTTGGGAAGTTGAGGCAGGTGGATCACTaGAGGCCAGGGTTTCGAGGCCAGCATTGTTTCTCCAGTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: NLQSPQFGKLRQVDH*RPGFRGQHCFSSLG Trigger: GCCAAGACTGGAGAAACAATGCTGGCCTCGAAACCCTGGCCTCAAGTGATCCACCTGCCTCAACTTCCCAAACTGCGGGGATTGCAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495566.1 |
||
| CDS TCA 72 bp | GAGGTCAGGAGATCGAGACCGTCCTGGCTAACATGGTaGAACCCCGTCTCTAATCTGCAATCCCCGCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: EVRRSRPSWLTW*NPVSNLQSPQF Trigger: AAACTGCGGGGATTGCAGATTAGAGACGGGGTTTCACCATGTTAGCCAGGACGGTCTCGATCTCCTGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495566.1 |
||