RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP4R1 (Homo sapiens)

Ensembl gene IDs: ENSG00000154845

Ensembl transcript IDs: ENST00000285124.12, ENST00000400555.7, ENST00000400556.8, ENST00000577393.1, ENST00000577779.1, ENST00000578010.1, ENST00000578178.5, ENST00000578329.1, ENST00000578557.1, ENST00000578875.5, ENST00000579638.5, ENST00000580182.5, ENST00000580283.1, ENST00000580583.5, ENST00000580745.5, ENST00000581835.1, ENST00000582240.5, ENST00000582594.5, ENST00000583092.1, ENST00000583438.1, ENST00000583903.5, ENST00000583988.1, ENST00000584074.5, ENST00000584754.1

Found 618 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGAATaGCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAG +
Preference number: 1 (lower is better)
Translates to: VSPPPKAIPGHMRGE*PLNLGSHGSRKDTE
Trigger: CTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR CCA 90 bp GAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTaGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGA +
Preference number: 1 (lower is better)
Translates to: EEGLSSPESYPRSHA*RMPTEPRLSWKQER
Trigger: TCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR TCA 90 bp CTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGAATGCCCACTaGACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAG +
Preference number: 1 (lower is better)
Translates to: LPRKLSQVTCVANAH*TSALMEAGKTPRFK
Trigger: CTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR TCA 90 bp GGGTGGATGCTTGCAAAATACTTGACATCGCTGTCACGGTCCATCTaGAGAGCCATGATGGTCTGCTCCACAGCCTCCTGGTGGCAGCTG +
Preference number: 1 (lower is better)
Translates to: GWMLAKYLTSLSRSI*RAMMVCSTASWWQL
Trigger: CAGCTGCCACCAGGAGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGGACCGTGACAGCGATGTCAAGTATTTTGCAAGCATCCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 90 bp CACTGCATGTCTGAGGCCAGAGTCTCATACGTCTCTCTCAGGCAGTaGCAATTCTGTCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTA +
Preference number: 1 (lower is better)
Translates to: HCMSEARVSYVSLRQ*QFCLPSVKATPGRL
Trigger: TAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGACAGAATTGGCACTGCCTGAGAGAGACGTATGAGACTCTGGCCTCAGACATGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 90 bp CTCCACAAGCTCATTGATGAGGTCCACTCCGAACGTTGGTGGTGTTaGCGCGTGCAGCTTCTTCACCATCTCGCTGACCAACTTGTAGGA +
Preference number: 1 (lower is better)
Translates to: LHKLIDEVHSERWWC*RVQLLHHLADQLVG
Trigger: TCCTACAAGTTGGTCAGCGAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 90 bp GCCAAAGTTCTCCACAAGCTCATTGATGAGGTCCACTCCGAACGTTaGTGGTGTTGCCGCGTGCAGCTTCTTCACCATCTCGCTGACCAA +
Preference number: 1 (lower is better)
Translates to: AKVLHKLIDEVHSER*WCCRVQLLHHLADQ
Trigger: TTGGTCAGCGAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 90 bp CTCTTGAAATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATaGAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATC +
Preference number: 1 (lower is better)
Translates to: LLKSLVLGVGNLHLQ*SPQERKVSPPPKAI
Trigger: GATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGATTTCAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR GCA 90 bp TGTCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTATATGCACAGTaGTTAGCAATTTCAGTGTCAACCGTCTGTGCACGAGAAGGGTCA +
Preference number: 1 (lower is better)
Translates to: CLPSVKATPGRLYAQ*LAISVSTVCAREGS
Trigger: TGACCCTTCTCGTGCACAGACGGTTGACACTGAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 90 bp AGCACTCGCACGTTAGGAACCCTGTCATTTGCTAAGGTTAGCAGATaGGGCATGAGATGCACAGCAAACTGGTCCATGGGAAGGCAGTCA +
Preference number: 1 (lower is better)
Translates to: STRTLGTLSFAKVSR*GMRCTANWSMGRQS
Trigger: TGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGCAAATGACAGGGTTCCTAACGTGCGAGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 90 bp AAAGTTCTCCACAAGCTCATTGATGAGGTCCACTCCGAACGTTGGTaGTGTTGCCGCGTGCAGCTTCTTCACCATCTCGCTGACCAACTT +
Preference number: 1 (lower is better)
Translates to: KVLHKLIDEVHSERW*CCRVQLLHHLADQL
Trigger: AAGTTGGTCAGCGAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 90 bp CCAATTCTGTCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTATATaGACAGTGCTTAGCAATTTCAGTGTCAACCGTCTGTGCACGAGA +
Preference number: 1 (lower is better)
Translates to: PILSSECQGHTREAI*TVLSNFSVNRLCTR
Trigger: TCTCGTGCACAGACGGTTGACACTGAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGACAGAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 90 bp ACACCGAGATTCAAGCCTTCTAGTAGGTTGAGGACGCTGTGCTCATaGCATCTTCGGAGATTTTGGTACTGGCAGGGTGGATGCTTGCAA +
Preference number: 1 (lower is better)
Translates to: TPRFKPSSRLRTLCS*HLRRFWYWQGGCLQ
Trigger: TTGCAAGCATCCACCCTGCCAGTACCAAAATCTCCGAAGATGCCATGAGCACAGCGTCCTCAACCTACTAGAAGGCTTGAATCTCGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 90 bp TCATTTGCTAAGGTTAGCAGATGCGGCATGAGATGCACAGCAAACTaGTCCATGGGAAGGCAGTCATCCTCAATGACAGTCTGGCAGACA +
Preference number: 1 (lower is better)
Translates to: SFAKVSRCGMRCTAN*SMGRQSSSMTVWQT
Trigger: TGTCTGCCAGACTGTCATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGCAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 90 bp TGGCCTCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTGCTaGAGTGAAATGGTCCGATCAGAAACAAAGCACCTCTCAACAGCA +
Preference number: 1 (lower is better)
Translates to: WPQVPIFCSEYCVAC*SEMVRSETKHLSTA
Trigger: TGCTGTTGAGAGGTGCTTTGTTTCTGATCGGACCATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 90 bp TTAGGAACCCTGTCATTTGCTAAGGTTAGCAGATGCGGCATGAGATaGACAGCAAACTGGTCCATGGGAAGGCAGTCATCCTCAATGACA +
Preference number: 1 (lower is better)
Translates to: LGTLSFAKVSRCGMR*TANWSMGRQSSSMT
Trigger: TGTCATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGCAAATGACAGGGTTCCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 90 bp GCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTaGGGCTGTCAGCTCTATGAGGACAGGGCACACTTTGGTCTCCAC +
Preference number: 1 (lower is better)
Translates to: AHYSHSFCFHIIIAI*GCQLYEDRAHFGLH
Trigger: GTGGAGACCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
3UTR TCA 90 bp TCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTGCTGCAGTaGAATGGTCCGATCAGAAACAAAGCACCTCTCAACAGCATCGCT +
Preference number: 1 (lower is better)
Translates to: SSPDLLLRILCCLLQ*NGPIRNKAPLNSIA
Trigger: AGCGATGCTGTTGAGAGGTGCTTTGTTTCTGATCGGACCATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 90 bp ACATGGCCTCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTaGTGCAGTGAAATGGTCCGATCAGAAACAAAGCACCTCTCAACA +
Preference number: 1 (lower is better)
Translates to: TWPQVPIFCSEYCVA*CSEMVRSETKHLST
Trigger: TGTTGAGAGGTGCTTTGTTTCTGATCGGACCATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 90 bp ATTTGGTCCGTCGGATTTCTTGACATGTTGCACATGAAACCGCCATaGAGCATTCAGCACAAGCCTTTCGGACTCCCCATACATTATCAG +
Preference number: 1 (lower is better)
Translates to: IWSVGFLDMLHMKPP*SIQHKPFGLPIHYQ
Trigger: CTGATAATGTATGGGGAGTCCGAAAGGCTTGTGCTGAATGCTTCATGGCGGTTTCATGTGCAACATGTCAAGAAATCCGACGGACCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 90 bp CATCGTGTTTTCCAGTATGACACTGGAATTACTAACACTGAGATCTaGAGGAGTATCCTCTGGCCTGACTTGTACATCCTCTGGGGCTTC +
Preference number: 1 (lower is better)
Translates to: HRVFQYDTGITNTEI*RSILWPDLYILWGF
Trigger: GAAGCCCCAGAGGATGTACAAGTCAGGCCAGAGGATACTCCTTCAGATCTCAGTGTTAGTAATTCCAGTGTCATACTGGAAAACACGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 90 bp GGAACACTAATTTCACCTAGAGGCTTCCCGGATGCCTCAGCAGCATaGTCTTCCATCGTGTTTTCCAGTATGACACTGGAATTACTAACA +
Preference number: 1 (lower is better)
Translates to: GTLISPRGFPDASAA*SSIVFSSMTLELLT
Trigger: TGTTAGTAATTCCAGTGTCATACTGGAAAACACGATGGAAGACCATGCTGCTGAGGCATCCGGGAAGCCTCTAGGTGAAATTAGTGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 90 bp TCAGGAAGAGGAGTCCTCCAGAAATGGAAGGAGTTATACAATTCCTaGTCTAAGAGAGCTGAATCTTGTGAAGTGGTGCCAACCTCTGGT +
Preference number: 1 (lower is better)
Translates to: SGRGVLQKWKELYNS*SKRAESCEVVPTSG
Trigger: ACCAGAGGTTGGCACCACTTCACAAGATTCAGCTCTCTTAGATCAGGAATTGTATAACTCCTTCCATTTCTGGAGGACTCCTCTTCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 90 bp TCTCCTTTCCTCATCAGGGCTAAAACTGCTATTGTTGCTCAAGTCTaGATCGCTGTGAATATAGTGAAGAGTGGAGTCCATATTCCTCAC +
Preference number: 1 (lower is better)
Translates to: SPFLIRAKTAIVAQV*IAVNIVKSGVHIPH
Trigger: GTGAGGAATATGGACTCCACTCTTCACTATATTCACAGCGATTCAGACTTGAGCAACAATAGCAGTTTTAGCCCTGATGAGGAAAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CAA 90 bp CGACCAGACCACTTGGGACATCTGCCAAAGTTCTCCACAAGCTCATaGATGAGGTCCACTCCGAACGTTGGTGGTGTTGCCGCGTGCAGC +
Preference number: 2 (lower is better)
Translates to: RPDHLGHLPKFSTSS*MRSTPNVGGVAACS
Trigger: GCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTTGGCAGATGTCCCAAGTGGTCTGGTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGCCCAGGTCACATGCGTaGCGAATGCCCACTGAACCT +
Preference number: 2 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEPRSHA*RMPTEP
Trigger: AGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGG...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR-3UTR TCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTAACTTGCACCTGCAATaGAGTCCGCAGGAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: RADTEGLFHIWAHVCLQANLHLQ*SPQERK
Trigger: CTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTT...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR-3UTR TCA 90 bp CTCATTGATGAGGTCCACTCCGAACGTTGGTGGTGTTGCCGCGTGCAGCTTCTTCAGACCTTTCGAACGTaGAACATTCTGCAATCGCAG +
Preference number: 2 (lower is better)
Translates to: LIDEVHSERWWCCRVQLLQTFRT*NILQSQ
Trigger: CTGCGATTGCAGAATGTTTCACGTTCGAAAGGTCTG...AAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp CATCGCAGACTTCCCTCAAGGTATCGAGCAAACTCCGGGCCACCATTTGTCTGTTTCCCCTCTACACTGTaGTTCTTGGGGGCTAAGGAA +
Preference number: 2 (lower is better)
Translates to: HRRLPSRYRANSGPPFVCFPSTL*FLGAKE
Trigger: TTCCTTAGCCCCCAAGAAGCACAGTGTAGAGGGGAA...ACAGACAAATGGTGGCCCGGAGTTTGCTCGATACCTTGAGGGAAGTCTGCGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR CAA 90 bp ATGACAGTCTGGCAGACAAAGACAAAGGCTTGCCGACCAGACCACTaGGGACATCTGCCAAAGTTCTCCACAAGCTCATTGATGAGGTCC +
Preference number: 2 (lower is better)
Translates to: MTVWQTKTKACRPDH*GHLPKFSTSSLMRS
Trigger: GGACCTCATCAATGAGCTTGTGGAGAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp AGAGTTTGTCTTAATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCAGGGCTGTCAGCTCTATaGGGACAGGGCACACTTTGG +
Preference number: 2 (lower is better)
Translates to: RVCLNVFASSTRTLGTLSGLSAL*GQGTLW
Trigger: CCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCC...TGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp ACGTTAGGAACCCTGTCATTTGCTAAGGTTAGCAGATGCGGCATGAGATGCACAGAGTATCCTCTGGCCTaGCTTGTACATCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: TLGTLSFAKVSRCGMRCTEYPLA*LVHPLG
Trigger: CCCCAGAGGATGTACAAGTCAGGCCAGAGGATACTC...TGTGCATCTCATGCCGCATCTGCTAACCTTAGCAAATGACAGGGTTCCTAACGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp CTTGGGACATCTGCCAAAGTTCTCCACAAGCTCATTGATGAGGTCCACTCCGAAGATGGTCTCTTCATGTaGATCCAGGCTGGAAGCACG +
Preference number: 2 (lower is better)
Translates to: LGTSAKVLHKLIDEVHSEDGLFM*IQAGST
Trigger: CGTGCTTCCAGCCTGGATGCACATGAAGAGACCATC...TTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTTGGCAGATGTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCCCCTCCTTTCCCATTTaGACACGTCACAAACGATTC +
Preference number: 2 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSPSFPI*TRHKRF
Trigger: GAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGG...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR CAA 90 bp TCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACTTaGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGA +
Preference number: 2 (lower is better)
Translates to: SLLSGAVSSMRTGHT*VSTSNRSMSSCSNR
Trigger: TCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
3UTR CAA 90 bp CTCATGGAAGCAGGAAAGACACCGAGATTCAAGCCTTCTAGTAGGTaGAGGACGCTGTGCTCATGGCATCTTCGGAGATTTTGGTACTGG +
Preference number: 2 (lower is better)
Translates to: LMEAGKTPRFKPSSR*RTLCSWHLRRFWYW
Trigger: CCAGTACCAAAATCTCCGAAGATGCCATGAGCACAGCGTCCTCAACCTACTAGAAGGCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp ATTCTGTCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTATATGCACAGTGCTTGTCCGTCGGATTTCTTaGCATGTTGCACATGAAACC +
Preference number: 2 (lower is better)
Translates to: ILSSECQGHTREAICTVLVRRIS*HVAHET
Trigger: GGTTTCATGTGCAACATGTCAAGAAATCCGACGGAC...AAGCACTGTGCATATAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGACAGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp CATCGCAGACTTCCCTCAAGGTATCGAGCAAACTCCGGGCCACCATTTGTCTGTGGGCTGGCAGAGTGTTaGAACTCATGGTTGAATTTT +
Preference number: 2 (lower is better)
Translates to: HRRLPSRYRANSGPPFVCGLAEC*NSWLNF
Trigger: AAAATTCAACCATGAGTTTCAACACTCTGCCAGCCC...ACAGACAAATGGTGGCCCGGAGTTTGCTCGATACCTTGAGGGAAGTCTGCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR-3UTR GCA 90 bp GTCCAGATAATGTCACTGGCCCTCCGCAACATGGCCTCAAGTCCCGATCTTCTGATTTCTTCAGTAGCTTaGTGGCCAACTACACTGCAA +
Preference number: 2 (lower is better)
Translates to: VQIMSLALRNMASSPDLLISSVA*WPTTLQ
Trigger: TTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAAT...CAGAAGATCGGGACTTGAGGCCATGTTGCGGAGGGCCAGTGACATTATCTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp ATTGGCAGCACAGACCTTTCGAACGTGAAACATTCTGCAATCGCAGCACATCTCCAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: IGSTDLSNVKHSAIAAHLQSQQS*LTCFPH
Trigger: GTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTG...GAGATGTGCTGCGATTGCAGAATGTTTCACGTTCGAAAGGTCTGTGCTGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCACCCAGGTCACATGCGTaGCGAATGCCCACTGAACCT +
Preference number: 2 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSPRSHA*RMPTEP
Trigger: AGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGG...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR-3UTR TCA 90 bp AATGACAGTCTGGCAGACAAAGACAAAGGCTTGCCGACCAGACCACTTGGGACATCTCAACAGCATCGCTaGTTAAAGGCACAGAATCTT +
Preference number: 2 (lower is better)
Translates to: NDSLADKDKGLPTRPLGTSQQHR*LKAQNL
Trigger: AAGATTCTGTGCCTTTAATCAGCGATGCTGTTGAGA...TGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp AGCTGTTCAGCCAGTTCAGCTCGAAACCGCCAATTTCTACTATTATCTGTCACCTTTCCACTGCATGTCTaGGGCCAGAGTCTCATACGT +
Preference number: 2 (lower is better)
Translates to: SCSASSARNRQFLLLSVTFPLHV*GQSLIR
Trigger: ACGTATGAGACTCTGGCCTCAGACATGCAGTGGAAA...GGTGACAGATAATAGTAGAAATTGGCGGTTTCGAGCTGAACTGGCTGAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp AATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCATTTGCTAAGGTTGGCAGTCATCCTCAATaGCAGTCTGGCAGACAAAGA +
Preference number: 2 (lower is better)
Translates to: NVFASSTRTLGTLSFAKVGSHPQ*QSGRQR
Trigger: TCTTTGTCTGCCAGACTGTCATTGAGGATGACTGCC...AACCTTAGCAAATGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp TTTCATCATCGCAGACTTCCCTCAAGGTATCGAGCAAACTCCGGGCCACCATTTTTCATCCTTCAGGAGTaGGAAGTTTTTGCTCCAGTC +
Preference number: 2 (lower is better)
Translates to: FHHRRLPSRYRANSGPPFFILQE*EVFAPV
Trigger: GACTGGAGCAAAAACTTCTCACTCCTGAAGGATGAA...AAATGGTGGCCCGGAGTTTGCTCGATACCTTGAGGGAAGTCTGCGATGATGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR-3UTR GCA 90 bp CATATGGTATTGAAGGCCGGTTTTCTTGACAAAACAGTGCGATGTGAGGCACCTCAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: HMVLKAGFLDKTVRCEAPQSQQS*LTCFPH
Trigger: GTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTG...AGGTGCCTCACATCGCACTGTTTTGTCAAGAAAACCGGCCTTCAATACCATATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000580182.5
3UTR-3UTR GCA 90 bp ATGGTATTGAAGGCCGGTTTTCTTGACAAAACAGTGCGATGTGAGGCACCTGTTCGTTCAATGAGCTCCTaGTCCAACAGAGCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: MVLKAGFLDKTVRCEAPVRSMSS*SNRASK
Trigger: TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACG...AACAGGTGCCTCACATCGCACTGTTTTGTCAAGAAAACCGGCCTTCAATACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
3UTR-3UTR GCA 90 bp CATGGGAAGGCAGTCATCCTCAATGACAGTCTGGCAGACAAAGACAAAGGCTTGTACTGTGTTGCTTGCTaGAGTGAAATGGTCCGATCA +
Preference number: 2 (lower is better)
Translates to: HGKAVILNDSLADKDKGLYCVAC*SEMVRS
Trigger: TGATCGGACCATTTCACTGCAGCAAGCAACACAGTA...CAAGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAGGATGACTGCCTTCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CCA 90 bp CAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATTTCCTCTGGTCCCTCTaGGCTGGGTTTTCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: QKKLCLHTDSEQWDVNSHFLWSL*AGFSPR
Trigger: TCTGGGGGAAAACCCAGCCCAGAGGGACCAGAGGAA...ATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CCA 90 bp AGAGTTTGTCTTAATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCACTGCAAGCTCGTGGATaGAGAATGCTAGAGTTCGTC +
Preference number: 2 (lower is better)
Translates to: RVCLNVFASSTRTLGTLSLQARG*RMLEFV
Trigger: GACGAACTCTAGCATTCTCCATCCACGAGCTTGCAG...TGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CCA 90 bp CAGCATACTTGTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTGAGACAACTACACTGTGCTTCTTaGGGGCTAAGGAAGAAACTG +
Preference number: 2 (lower is better)
Translates to: QHTCPISPGASTFHLVRQLHCAS*GLRKKL
Trigger: CAGTTTCTTCCTTAGCCCCCAAGAAGCACAGTGTAG...TTGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR CAA 90 bp CGGGCCACCATTTGTCTGTTAAATATGTTCTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTGAGACA +
Preference number: 2 (lower is better)
Translates to: RATICLLNMFSLAAY*SNLPRGVNISSCET
Trigger: TGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGACAAATGGTGGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR-3UTR GCA 90 bp ACGTTAGGAACCCTGTCATTTGCTAAGGTTAGCAGATGCGGCATGAGATGCACAACCAGGGAGGCTATATaGACAGTGCTTAGCAATTTC +
Preference number: 2 (lower is better)
Translates to: TLGTLSFAKVSRCGMRCTTREAI*TVLSNF
Trigger: GAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGT...TGTGCATCTCATGCCGCATCTGCTAACCTTAGCAAATGACAGGGTTCCTAACGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CCA 90 bp TGCGGCATGAGATGCACAGCAAACTGGTCCATGGGAAGGCAGTCATCCTCAATGAAATATCTCCAAAATTaGCAGCACAGACCTTTCGAA +
Preference number: 2 (lower is better)
Translates to: CGMRCTANWSMGRQSSSMKYLQN*QHRPFE
Trigger: TTCGAAAGGTCTGTGCTGCCAATTTTGGAGATATTT...CATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp ACTTGTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTGAGACAAAGTCCAAATTTTTCACAGGTATaGCTTCCCCTCTACACTGTG +
Preference number: 2 (lower is better)
Translates to: TCPISPGASTFHLVRQSPNFSQV*LPLYTV
Trigger: CACAGTGTAGAGGGGAAGGCATACCTGTGAAAAATT...TGGACTTTGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR-3UTR CCA 90 bp CTGGGTTTTCCCCCAGAGTTCTGTTCAAGCTCTATGTCTAGATCTATTTCAGGAGGACAGGGCACACTTTaGTCTCCACATCAAATCGTT +
Preference number: 2 (lower is better)
Translates to: LGFPPEFCSSSMSRSISGGQGTL*SPHQIV
Trigger: AACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCC...TCCTGAAATAGATCTAGACATAGAGCTTGAACAGAACTCTGGGGGAAAACCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp GACTCCCCATACATTATCAGAACAAAGCTGGAAAAATCTGGGCAGCAACATTTCCATCAAATCGTTCAATaGGCTCCTGCTCCAACAGAG +
Preference number: 2 (lower is better)
Translates to: DSPYIIRTKLEKSGQQHFHQIVQ*APAPTE
Trigger: CTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATG...GAAATGTTGCTGCCCAGATTTTTCCAGCTTTGTTCTGATAATGTATGGGGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp ATAAGACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATACAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: IRRSVISFPTMGAILHIIQSQQS*LTCFPH
Trigger: GTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTG...TATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
3UTR-3UTR GCA 90 bp CTGAGGTACAACATCTTGTACTTTAGTTCTCCTTTCCTCATCAGGGCTAAAACTCGTTCAATGAGCTCCTaGTCCAACAGAGCCAGCAAA +
Preference number: 2 (lower is better)
Translates to: LRYNILYFSSPFLIRAKTRSMSS*SNRASK
Trigger: TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACG...AGTTTTAGCCCTGATGAGGAAAGGAGAACTAAAGTACAAGATGTTGTACCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAATCTGGGCACACGTCTaGCTTCAGGCTGTAAGAATT +
Preference number: 2 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSIWAHV*LQAVRI
Trigger: AATTCTTACAGCCTGAAGGCAGACGTGTGCCCAGAT...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR-3UTR CCA 90 bp AATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCATTTGCTAAGGTTATAACTGCAAGCTCGTaGATGGAGAATGCTAGAGTT +
Preference number: 2 (lower is better)
Translates to: NVFASSTRTLGTLSFAKVITASS*MENARV
Trigger: AACTCTAGCATTCTCCATCCACGAGCTTGCAGTTAT...AACCTTAGCAAATGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp CTGAGGTACAACATCTTGTACTTTAGTTCTCCTTTCCTCATCAGGGCTAAAACTTGTTGCTTGCTGCAGTaGAATGGTCCGATCAGAAAC +
Preference number: 2 (lower is better)
Translates to: LRYNILYFSSPFLIRAKTCCLLQ*NGPIRN
Trigger: GTTTCTGATCGGACCATTTCACTGCAGCAAGCAACA...AGTTTTAGCCCTGATGAGGAAAGGAGAACTAAAGTACAAGATGTTGTACCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp ATTTGTCTGTTAAATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCCAGGCAACATTTCATCTTGTaGGACAAAGTCCAGGGCTGG +
Preference number: 2 (lower is better)
Translates to: ICLLNMFSLAAYLSNLPRQHFIL*DKVQGW
Trigger: CCAGCCCTGGACTTTGTCTCACAAGATGAAATGTTG...CCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGACAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR-3UTR GCA 90 bp CTGGGTTTTCCCCCAGAGTTCTGTTCAAGCTCTATGTCTAGATCTATTTCAGGAGCTGGCCAACTACACTaGAAATATCTCCAAAATTGG +
Preference number: 2 (lower is better)
Translates to: LGFPPEFCSSSMSRSISGAGQLH*KYLQNW
Trigger: CCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAGC...TCCTGAAATAGATCTAGACATAGAGCTTGAACAGAACTCTGGGGGAAAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CCA 90 bp CTGAGGTACAACATCTTGTACTTTAGTTCTCCTTTCCTCATCAGGGCTAAAACTCTGAATCTTGTGAAGTaGTGCCAACCTCTGGTCGTA +
Preference number: 2 (lower is better)
Translates to: LRYNILYFSSPFLIRAKTLNLVK*CQPLVV
Trigger: TACGACCAGAGGTTGGCACCACTTCACAAGATTCAG...AGTTTTAGCCCTGATGAGGAAAGGAGAACTAAAGTACAAGATGTTGTACCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CAA 90 bp AGGATAAGACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTaGCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTGCTA +
Preference number: 2 (lower is better)
Translates to: RIRRSVISFPTMGAI*HIIATASVFTSSLL
Trigger: TAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGTCTTATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR TCA 90 bp TCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCAAAAAAAGCATATGGTATTaGAGGCCGGTTTTCTTGACA +
Preference number: 2 (lower is better)
Translates to: SALTVGSESSANLLILSKKSIWY*RPVFLT
Trigger: TGTCAAGAAAACCGGCCTTCAATACCATATGCTTTT...TTTGGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGA
42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000580182.5
3UTR-3UTR CCA 90 bp CAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATATCATCATTGCTATCTaGGGCTGTCAGCTCTATGAG +
Preference number: 2 (lower is better)
Translates to: QKKLCLHTDSEQWDVNSHIIIAI*GCQLYE
Trigger: CTCATAGAGCTGACAGCCCCAGATAGCAATGATGAT...ATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CCA 90 bp ATAAGACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAATCATCATTGCTATCTaGGGCTGTCAGCTCTATGAG +
Preference number: 2 (lower is better)
Translates to: IRRSVISFPTMGAILHIIIIIAI*GCQLYE
Trigger: CTCATAGAGCTGACAGCCCCAGATAGCAATGATGAT...TATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
3UTR-3UTR TCA 90 bp ACTTGTAGGAAATCCAACGAACAGAAGAAACTTTGTCTGCACACAGATTCAGAGTCTGCAGCTGTCAATTaGTCTCCAAGAATAACTGCA +
Preference number: 2 (lower is better)
Translates to: TCRKSNEQKKLCLHTDSESAAVN*SPRITA
Trigger: TGCAGTTATTCTTGGAGATCAATTGACAGCTGCAGA...CTCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCGTTGGATTTCCTACAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp TCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCAAAAAATATGTTCTCACTTaGAGCATACTTGTCCAATCT +
Preference number: 2 (lower is better)
Translates to: SALTVGSESSANLLILSKKYVLT*SILVQS
Trigger: AGATTGGACAAGTATGCTGCAAGTGAGAACATATTT...TTTGGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGA
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR-3UTR CCA 90 bp CAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATTCTGGATCATCAATGTaGGGCTCTAGATTTTCTATC +
Preference number: 2 (lower is better)
Translates to: QKKLCLHTDSEQWDVNSHSGSSM*GSRFSI
Trigger: GATAGAAAATCTAGAGCCCCACATTGATGATCCAGA...ATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR GCA 90 bp AAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATAAACATATCTCCAAGAATAACTaGAAGCTCGTGGATGGAGAA +
Preference number: 2 (lower is better)
Translates to: KLCLHTDSEQWDVNSHKHISKNN*KLVDGE
Trigger: TTCTCCATCCACGAGCTTGCAGTTATTCTTGGAGAT...ATGTTTATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp CTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTaGCGAATGCCCACTGAACCTCGGCTCTCATGGAAG +
Preference number: 3 (lower is better)
Translates to: LSSPESYPRSHA*RMPTEPRLSWK
Trigger: CTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR TCA 72 bp TCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATaGAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCG +
Preference number: 3 (lower is better)
Translates to: SLVLGVGNLHLQ*SPQERKVSPPP
Trigger: CGGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR GCA 72 bp CCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGAATaGCCACTGAACCTCGGCTCTCATGGAAGCAGGAAA +
Preference number: 3 (lower is better)
Translates to: PPKAIPGHMRGE*PLNLGSHGSRK
Trigger: TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGGATAGCTTTCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR TCA 72 bp AAGCTATCCCAGGTCACATGCGTGGCGAATGCCCACTaGACCTCGGCTCTCATGGAAGCAGGAAAGACACCG +
Preference number: 3 (lower is better)
Translates to: KLSQVTCVANAH*TSALMEAGKTP
Trigger: CGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGGATAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR GCA 72 bp CTCATTGATGAGGTCCACTCCGAACGTTGGTGGTGTTaGCGCGTGCAGCTTCTTCACCATCTCGCTGACCAA +
Preference number: 3 (lower is better)
Translates to: LIDEVHSERWWC*RVQLLHHLADQ
Trigger: TTGGTCAGCGAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp CACAAGCTCATTGATGAGGTCCACTCCGAACGTTGGTaGTGTTGCCGCGTGCAGCTTCTTCACCATCTCGCT +
Preference number: 3 (lower is better)
Translates to: HKLIDEVHSERW*CCRVQLLHHLA
Trigger: AGCGAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp CTCCACAAGCTCATTGATGAGGTCCACTCCGAACGTTaGTGGTGTTGCCGCGTGCAGCTTCTTCACCATCTC +
Preference number: 3 (lower is better)
Translates to: LHKLIDEVHSER*WCCRVQLLHHL
Trigger: GAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp TCTGAGGCCAGAGTCTCATACGTCTCTCTCAGGCAGTaGCAATTCTGTCTTCCGAGTGTCAAGGCCACACCA +
Preference number: 3 (lower is better)
Translates to: SEARVSYVSLRQ*QFCLPSVKATP
Trigger: TGGTGTGGCCTTGACACTCGGAAGACAGAATTGGCACTGCCTGAGAGAGACGTATGAGACTCTGGCCTCAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp CATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATaGAAGCAGGAAAGACACCGAGATTCAAGCCTTCTA +
Preference number: 3 (lower is better)
Translates to: HAWRMPTEPRLS*KQERHRDSSLL
Trigger: TAGAAGGCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 72 bp CAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATaGGCTCCTGCTCCAACAGAGCCAGCAAAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: QGTLWSPHQIVQ*APAPTEPAKLP
Trigger: AGGCAGCTTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
3UTR TCA 72 bp CTTGCAAAATACTTGACATCGCTGTCACGGTCCATCTaGAGAGCCATGATGGTCTGCTCCACAGCCTCCTGG +
Preference number: 3 (lower is better)
Translates to: LAKYLTSLSRSI*RAMMVCSTASW
Trigger: CCAGGAGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGGACCGTGACAGCGATGTCAAGTATTTTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp TGGCCCTCCGCAACATGGCCTCAAGTCCCGATCTTCTaGTCAGAATACTGTGTTGCTTGCTGCAGTGAAATG +
Preference number: 3 (lower is better)
Translates to: WPSATWPQVPIF*SEYCVACCSEM
Trigger: CATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCATGTTGCGGAGGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCCCCCTCCTTTCCCATTaGCACACGTCACAAACGATT +
Preference number: 3 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSPLLSH*HTSQTI
Trigger: AATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGG...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR-3UTR CAA 90 bp GACATCGCTGTCACGGTCCATCTGAAGAGCCATGATGGTCTGCTCCACAGCCTCCTAAAACTGCTATTGTaGCTCAAGTCTGAATCGCTG +
Preference number: 3 (lower is better)
Translates to: DIAVTVHLKSHDGLLHSLLKLLL*LKSESL
Trigger: CAGCGATTCAGACTTGAGCAACAATAGCAGTTTTAG...GAGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGGACCGTGACAGCGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 72 bp GAACCCTGTCATTTGCTAAGGTTAGCAGATGCGGCATaGGATGCACAGCAAACTGGTCCATGGGAAGGCAGT +
Preference number: 3 (lower is better)
Translates to: EPCHLLRLADAA*DAQQTGPWEGS
Trigger: ACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGCAAATGACAGGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp TCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTATATaGACAGTGCTTAGCAATTTCAGTGTCAACCGTCTG +
Preference number: 3 (lower is better)
Translates to: SSECQGHTREAI*TVLSNFSVNRL
Trigger: CAGACGGTTGACACTGAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp TCCTCAATGACAGTCTGGCAGACAAAGACAAAGGCTTaGCGACCAGACCACTTGGGACATCTGCCAAAGTTC +
Preference number: 3 (lower is better)
Translates to: SSMTVWQTKTKA*RPDHLGHLPKF
Trigger: GAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp CTGTCATTTGCTAAGGTTAGCAGATGCGGCATGAGATaGACAGCAAACTGGTCCATGGGAAGGCAGTCATCC +
Preference number: 3 (lower is better)
Translates to: LSFAKVSRCGMR*TANWSMGRQSS
Trigger: GGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGCAAATGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp CCGAGATTCAAGCCTTCTAGTAGGTTGAGGACGCTGTaGTCATGGCATCTTCGGAGATTTTGGTACTGGCAG +
Preference number: 3 (lower is better)
Translates to: PRFKPSSRLRTL*SWHLRRFWYWQ
Trigger: CTGCCAGTACCAAAATCTCCGAAGATGCCATGAGCACAGCGTCCTCAACCTACTAGAAGGCTTGAATCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp AAGGTTAGCAGATGCGGCATGAGATGCACAGCAAACTaGTCCATGGGAAGGCAGTCATCCTCAATGACAGTC +
Preference number: 3 (lower is better)
Translates to: KVSRCGMRCTAN*SMGRQSSSMTV
Trigger: GACTGTCATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp TTCAAGCCTTCTAGTAGGTTGAGGACGCTGTGCTCATaGCATCTTCGGAGATTTTGGTACTGGCAGGGTGGA +
Preference number: 3 (lower is better)
Translates to: FKPSSRLRTLCS*HLRRFWYWQGG
Trigger: TCCACCCTGCCAGTACCAAAATCTCCGAAGATGCCATGAGCACAGCGTCCTCAACCTACTAGAAGGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp ATTCTGTCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTATATGCACAGTGCTTGTTTTCACATCATCATaGCTATCTGGGGCTGTCAGC +
Preference number: 3 (lower is better)
Translates to: ILSSECQGHTREAICTVLVFTSS*LSGAVS
Trigger: GCTGACAGCCCCAGATAGCAATGATGATGTGAAAAC...AAGCACTGTGCATATAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGACAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCTTTGTCTTAATGTCTTaGCAAGCAGCACTCGCACGT +
Preference number: 3 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSFVLMS*QAALAR
Trigger: ACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAA...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp GACTTCCCTCAAGGTATCGAGCAAACTCCGGGCCACCATTTGTCTGTTAAATATTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: DFPQGIEQTPGHHLSVKYSLAAY*SNLPRG
Trigger: GCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGA...ATATTTAACAGACAAATGGTGGCCCGGAGTTTGCTCGATACCTTGAGGGAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR TCA 72 bp CTATCATTTCTTCCAGTTCCTTTCTGGTGGCCATGGTaGTGTTTGGAGAACTGGGCACAGGGCCCTCAGATT +
Preference number: 3 (lower is better)
Translates to: LSFLPVPFWWPW*CLENWAQGPQI
Trigger: AATCTGAGGGCCCTGTGCCCAGTTCTCCAAACATCACCATGGCCACCAGAAAGGAACTGGAAGAAATGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp ACGTTAGGAACCCTGTCATTTGCTAAGGTTAGCAGATaGGGCATGAGATGCACAGCAAACTGGTCCATGGGA +
Preference number: 3 (lower is better)
Translates to: TLGTLSFAKVSR*GMRCTANWSMG
Trigger: TCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGCAAATGACAGGGTTCCTAACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp CCGGGCCACCATTTGTCTGTTAAATATGTTCTCACTTaGAGCATACTTGTCCAATCTCCCCAGGGGCGTCAA +
Preference number: 3 (lower is better)
Translates to: PGHHLSVKYVLT*SILVQSPQGRQ
Trigger: TTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGACAAATGGTGGCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR CCA 72 bp ATTTCACCTAGAGGCTTCCCGGATGCCTCAGCAGCATaGTCTTCCATCGTGTTTTCCAGTATGACACTGGAA +
Preference number: 3 (lower is better)
Translates to: ISPRGFPDASAA*SSIVFSSMTLE
Trigger: TTCCAGTGTCATACTGGAAAACACGATGGAAGACCATGCTGCTGAGGCATCCGGGAAGCCTCTAGGTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp CTCATGGCATCTTCGGAGATTTTGGTACTGGCAGGGTaGATGCTTGCAAAATACTTGACATCGCTGTCACGG +
Preference number: 3 (lower is better)
Translates to: LMASSEILVLAG*MLAKYLTSLSR
Trigger: CCGTGACAGCGATGTCAAGTATTTTGCAAGCATCCACCCTGCCAGTACCAAAATCTCCGAAGATGCCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp CTTGGGACATCTGCCAAAGTTCTCCACAAGCTCATTGATGAGGTCCACTCCGAAACCATGGGAGCCATTTaGCACATTATAGCCACAGCT +
Preference number: 3 (lower is better)
Translates to: LGTSAKVLHKLIDEVHSETMGAI*HIIATA
Trigger: AGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGT...TTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTTGGCAGATGTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp AAGCATATGGTATTGAAGGCCGGTTTTCTTGACAAAACAGTGCGATGTGAGGCAGCTCCGCTCTCACAGTaGGTTCTGAATCATCGGCCA +
Preference number: 3 (lower is better)
Translates to: KHMVLKAGFLDKTVRCEAAPLSQ*VLNHRP
Trigger: TGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGC...TGCCTCACATCGCACTGTTTTGTCAAGAAAACCGGCCTTCAATACCATATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
3UTR TCA 72 bp TCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATaGGGACAGGGCACACTTTGGTCTCCACATCAAATC +
Preference number: 3 (lower is better)
Translates to: SHHHCYLGLSAL*GQGTLWSPHQI
Trigger: GATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
3UTR TCA 72 bp GTCGGATTTCTTGACATGTTGCACATGAAACCGCCATaGAGCATTCAGCACAAGCCTTTCGGACTCCCCATA +
Preference number: 3 (lower is better)
Translates to: VGFLDMLHMKPP*SIQHKPFGLPI
Trigger: TATGGGGAGTCCGAAAGGCTTGTGCTGAATGCTTCATGGCGGTTTCATGTGCAACATGTCAAGAAATCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp ATCTTCGGAGATTTTGGTACTGGCAGGGTGGATGCTTaGAAAATACTTGACATCGCTGTCACGGTCCATCTG +
Preference number: 3 (lower is better)
Translates to: IFGDFGTGRVDA*KILDIAVTVHL
Trigger: CAGATGGACCGTGACAGCGATGTCAAGTATTTTGCAAGCATCCACCCTGCCAGTACCAAAATCTCCGAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp AAGACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCAGGACAGGGCACACTTaGGTCTCCACATCAAATCGT +
Preference number: 3 (lower is better)
Translates to: KTLCNILPNHGSHFAHYSRTGHT*VSTSNR
Trigger: ACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCT...GCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
3UTR-3UTR CAA 90 bp AGCTGTTCAGCCAGTTCAGCTCGAAACCGCCAATTTCTACTATTATCTGTCACCCATTTCTTCAGTAGCTaGCTGGCCAACTACACTGCA +
Preference number: 3 (lower is better)
Translates to: SCSASSARNRQFLLLSVTHFFSS*LANYTA
Trigger: TGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAATG...GGTGACAGATAATAGTAGAAATTGGCGGTTTCGAGCTGAACTGGCTGAACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp CACCATTTGTCTGTTAAATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCGCTCCGCTCTCACAGTaGGTTCTGAATCATCGGCCA +
Preference number: 3 (lower is better)
Translates to: HHLSVKYVLTCSILVQSPAPLSQ*VLNHRP
Trigger: TGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGC...GGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGACAAATGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR GCA 72 bp TTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCACCTGATTATTCTGATC +
Preference number: 3 (lower is better)
Translates to: FNELLLQQSQQS*LTCFPHLIILI
Trigger: GATCAGAATAATCAGGTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000578875.5
ENST00000580182.5
3UTR-3UTR CAA 90 bp AATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCATTTGCTAAGGTTGGGCTAAAACTGCTATaGTTGCTCAAGTCTGAATCG +
Preference number: 3 (lower is better)
Translates to: NVFASSTRTLGTLSFAKVGLKLL*LLKSES
Trigger: CGATTCAGACTTGAGCAACAATAGCAGTTTTAGCCC...AACCTTAGCAAATGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp AATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCATTTGCTAAGGTTCAAATATCTCCAAAATaGGCAGCACAGACCTTTCGA +
Preference number: 3 (lower is better)
Translates to: NVFASSTRTLGTLSFAKVQISPK*AAQTFR
Trigger: TCGAAAGGTCTGTGCTGCCAATTTTGGAGATATTTG...AACCTTAGCAAATGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp AGAGTTTGTCTTAATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCACGAACAGAAGAAACTTaGTCTGCACACAGATTCAGA +
Preference number: 3 (lower is better)
Translates to: RVCLNVFASSTRTLGTLSRTEET*SAHRFR
Trigger: TCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCG...TGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 72 bp TTCCAGTATGACACTGGAATTACTAACACTGAGATCTaGAGGAGTATCCTCTGGCCTGACTTGTACATCCTC +
Preference number: 3 (lower is better)
Translates to: FQYDTGITNTEI*RSILWPDLYIL
Trigger: GAGGATGTACAAGTCAGGCCAGAGGATACTCCTTCAGATCTCAGTGTTAGTAATTCCAGTGTCATACTGGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 72 bp GGAGTCCTCCAGAAATGGAAGGAGTTATACAATTCCTaGTCTAAGAGAGCTGAATCTTGTGAAGTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: GVLQKWKELYNS*SKRAESCEVVP
Trigger: TGGCACCACTTCACAAGATTCAGCTCTCTTAGATCAGGAATTGTATAACTCCTTCCATTTCTGGAGGACTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 72 bp CCAGTTCATCTTGCAAATCACTTCTCTTTTCTATACTaGTGGTCTCTTCATGTGCATCCAGGCTGGAAGCAC +
Preference number: 3 (lower is better)
Translates to: PVHLANHFSFLY*WSLHVHPGWKH
Trigger: GTGCTTCCAGCCTGGATGCACATGAAGAGACCATCAGTATAGAAAAGAGAAGTGATTTGCAAGATGAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp GCCTTTCGGACTCCCCATACATTATCAGAACAAAGCTaGAAAAATCTGGGCAGCAACATTTCTTCAGTAGCT +
Preference number: 3 (lower is better)
Translates to: AFRTPHTLSEQS*KNLGSNISSVA
Trigger: AGCTACTGAAGAAATGTTGCTGCCCAGATTTTTCCAGCTTTGTTCTGATAATGTATGGGGAGTCCGAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp TGCTCAAGTCTGAATCGCTGTGAATATAGTGAAGAGTaGAGTCCATATTCCTCACACTCCAGAGTCCAGATA +
Preference number: 3 (lower is better)
Translates to: CSSLNRCEYSEE*SPYSSHSRVQI
Trigger: TATCTGGACTCTGGAGTGTGAGGAATATGGACTCCACTCTTCACTATATTCACAGCGATTCAGACTTGAGCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp ATTTGTCTGTTAAATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCCAGGTCTACACTGTGCTTCTaGGGGGCTAAGGAAGAAACT +
Preference number: 3 (lower is better)
Translates to: ICLLNMFSLAAYLSNLPRSTLCF*GAKEET
Trigger: AGTTTCTTCCTTAGCCCCCAAGAAGCACAGTGTAGA...CCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGACAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR TCA 72 bp CTCATCAGGGCTAAAACTGCTATTGTTGCTCAAGTCTaGATCGCTGTGAATATAGTGAAGAGTGGAGTCCAT +
Preference number: 3 (lower is better)
Translates to: LIRAKTAIVAQV*IAVNIVKSGVH
Trigger: ATGGACTCCACTCTTCACTATATTCACAGCGATTCAGACTTGAGCAACAATAGCAGTTTTAGCCCTGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR TCA 72 bp CCATTAAAAATTGGAACCAGATCTGCAGCTGTCAATTaGTCTCCAAGAATAACTGCAAGCTCGTGGATGGAG +
Preference number: 3 (lower is better)
Translates to: PLKIGTRSAAVN*SPRITASSWME
Trigger: CTCCATCCACGAGCTTGCAGTTATTCTTGGAGATCAATTGACAGCTGCAGATCTGGTTCCAATTTTTAATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR GCA 72 bp TGGAAAAATCTGGGCAGCAACATTTCTTCAGTAGCTTaGTGGCCAACTACACTGCAAATATCTCCAAAATTG +
Preference number: 3 (lower is better)
Translates to: WKNLGSNISSVA*WPTTLQISPKL
Trigger: CAATTTTGGAGATATTTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAATGTTGCTGCCCAGATTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR-3UTR CAA 90 bp AAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATAAACATGCTCAGAATACTGTGTaGCTTGCTGCAGTGAAATGG +
Preference number: 3 (lower is better)
Translates to: KLCLHTDSEQWDVNSHKHAQNTV*LAAVKW
Trigger: CCATTTCACTGCAGCAAGCAACACAGTATTCTGAGC...ATGTTTATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CCA 72 bp ACTTCCACTTGTGCTTTAACATCTGGATCATCAATGTaGGGCTCTAGATTTTCTATCATTTCTTCCAGTTCC +
Preference number: 3 (lower is better)
Translates to: TSTCALTSGSSM*GSRFSIISSSS
Trigger: GGAACTGGAAGAAATGATAGAAAATCTAGAGCCCCACATTGATGATCCAGATGTTAAAGCACAAGTGGAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAGGAGCCGGGGCTACATaGAGCGGCGCGAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEGAGAT*SGASRG
Trigger: TCCCCGGCTCGCGCCGCTCCATGTAGCCCCGGCTCC...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGGAGCCGGGGCTACATaGAGCGGCGCGAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEGAGAT*SGASRG
Trigger: TCCCCGGCTCGCGCCGCTCCATGTAGCCCCGGCTCC...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGGTCCGCCATCTTGTaGTCGCCCCCTCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQERSAIL*SPPPPR
Trigger: CCGCGGAGGAGGGGGCGACCACAAGATGGCGGACCT...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGGTCCACTCCGAACGTTaGTGGTGTTGCCGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAVHSER*WCCRVQ
Trigger: CTGCACGCGGCAACACCACCAACGTTCGGAGTGGAC...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ACCTGTTCCATCAGCTCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGGGAGCCGGGGCTACATaGAGCGGCGCGAGCCGGGGA +
Preference number: 4 (lower is better)
Translates to: TCSISSALTVGSESSANLGAGAT*SGASRG
Trigger: TCCCCGGCTCGCGCCGCTCCATGTAGCCCCGGCTCC...CAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGCTGATGGAACAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR GCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGAGAGCCATGATGGTCTaGTCCACAGCCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVARAMMV*STASWW
Trigger: CCACCAGGAGGCTGTGGAGCAGACCATCATGGCTCT...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GTCCAGATAATGTCACTGGCCCTCCGCAACATGGCCTCAAGTCCCGATCTTCTGTGCTCCACAGCCTCCTaGTGGCAGCTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: VQIMSLALRNMASSPDLLCSTAS*WQLAEA
Trigger: GGCCTCTGCCAGCTGCCACCAGGAGGCTGTGGAGCA...CAGAAGATCGGGACTTGAGGCCATGTTGCGGAGGGCCAGTGACATTATCTGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAAGGTCCGCCATCTTGTaGTCGCCCCCTCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEERSAIL*SPPPPR
Trigger: CCGCGGAGGAGGGGGCGACCACAAGATGGCGGACCT...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AAACAGTGCGATGTGAGGCACCTGTTCCATCAGCTCCGCTCTCACAGTTGGTTCAGGTCCGCCATCTTGTaGTCGCCCCCTCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: KQCDVRHLFHQLRSHSWFRSAIL*SPPPPR
Trigger: CCGCGGAGGAGGGGGCGACCACAAGATGGCGGACCT...GAACCAACTGTGAGAGCGGAGCTGATGGAACAGGTGCCTCACATCGCACTGTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGTCCTGCAGGTCCTCCTaGAGCAGCGAGAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGESCRSS*SSERSA
Trigger: GGCGGACCTCTCGCTGCTTCAGGAGGACCTGCAGGA...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCGGGCTGTCAGCTCTATaGGGACAGGGCACACTTTGG +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPGLSAL*GQGTLW
Trigger: CCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCC...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGCCATCTGAAGAGCCATaGTGGTCTGCTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAPSEEP*WSAPQP
Trigger: AGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGG...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCCTGGTCCCTCTGGGCTaGGTTTTCCCCCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPLVPLG*VFPQSS
Trigger: AGAACTCTGGGGGAAAACCCAGCCCAGAGGGACCAG...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGCCTCCTGGTGGCAGCTaGCAGAGGCCAAGAAATAGT +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAPPGGS*QRPRNS
Trigger: ACTATTTCTTGGCCTCTGCCAGCTGCCACCAGGAGG...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGGGCTGTCAGCTCTATaGGGACAGGGCACACTTTGG +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKGLSAL*GQGTLW
Trigger: CCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCC...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCCTGTCACGGTCCATCTaGAGAGCCATGATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPLSRSI*RAMMVC
Trigger: GCAGACCATCATGGCTCTTCAGATGGACCGTGACAG...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAGTGGCGAATGCCCACTaGACCTCGGCTCTCATGGAA +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEVANAH*TSALME
Trigger: TTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCAC...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGGATGGTCTCTTCATGTaGATCCAGGCTGGAAGCACG +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVADGLFM*IQAGST
Trigger: CGTGCTTCCAGCCTGGATGCACATGAAGAGACCATC...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGAGCCATGATGGTCTaGTCCACAGCCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQERAMMV*STASWW
Trigger: CCACCAGGAGGCTGTGGAGCAGACCATCATGGCTCT...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAACATGTGCATCCAGGCTaGAAGCACGTAGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKHVHPG*KHVVQR
Trigger: CCGCTGCACTACGTGCTTCCAGCCTGGATGCACATG...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGTCCTGCAGGTCCTCCTaGAGCAGCGAGAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: HFGLHIKSFNELLLQQSQSCRSS*SSERSA
Trigger: GGCGGACCTCTCGCTGCTTCAGGAGGACCTGCAGGA...CTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp TGTTCCATCAGCTCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTATCCTGCAGGTCCTCCTaGAGCAGCGAGAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: CSISSALTVGSESSANLLSCRSS*SSERSA
Trigger: GGCGGACCTCTCGCTGCTTCAGGAGGACCTGCAGGA...TAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGCTGATGGAACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR TCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCAAAGGTCCCAGAGACTaGAAAGCTGCTTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPKGPRD*KAAWRT
Trigger: GGTTCGCCAAGCAGCTTTTCAGTCTCTGGGACCTTT...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAACCATCTGAAGAGCCATaGTGGTCTGCTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEPSEEP*WSAPQP
Trigger: AGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGG...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GACATCGCTGTCACGGTCCATCTGAAGAGCCATGATGGTCTGCTCCACAGCCTCGAACGTTGGTGGTGTTaGCGCGTGCAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: DIAVTVHLKSHDGLLHSLERWWC*RVQLLH
Trigger: GTGAAGAAGCTGCACGCGGCAACACCACCAACGTTC...GAGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGGACCGTGACAGCGATGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGAACGTTGGTGGTGTTaGCGCGTGCAGCTTCTTCAC +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKERWWC*RVQLLH
Trigger: GTGAAGAAGCTGCACGCGGCAACACCACCAACGTTC...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGAGATGCGGCATGAGATaGACAGCAAACTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVARCGMR*TANWSM
Trigger: CATGGACCAGTTTGCTGTGCATCTCATGCCGCATCT...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGCAGCAAACTGGTCCATaGGAAGGCAGTCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAQQTGP*EGSHPQ
Trigger: TTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTG...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAACCTCCTGGTGGCAGCTaGCAGAGGCCAAGAAATAGT +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKPPGGS*QRPRNS
Trigger: ACTATTTCTTGGCCTCTGCCAGCTGCCACCAGGAGG...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCTCCACAGCCTCCTaGTGGCAGCTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVCSTAS*WQLAEA
Trigger: GGCCTCTGCCAGCTGCCACCAGGAGGCTGTGGAGCA...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCGAACCTCGGCTCTCATaGAAGCAGGAAAGACACCGA +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPEPRLS*KQERHR
Trigger: TCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTC...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CAGCATACTTGTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTGAGACAAAGGTCCGCCATCTTGTaGTCGCCCCCTCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: QHTCPISPGASTFHLVRQRSAIL*SPPPPR
Trigger: CCGCGGAGGAGGGGGCGACCACAAGATGGCGGACCT...TTGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR CCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCGGTCTCTTTCACATCTaGGCACACGTCTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPGLFHI*AHVCLQ
Trigger: CTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACC...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGGTCCGTCGGATTTCTTaGCATGTTGCACATGAAACC +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAVRRIS*HVAHET
Trigger: GGTTTCATGTGCAACATGTCAAGAAATCCGACGGAC...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCTTTCCACTGCATGTCTaGGGCCAGAGTCTCATACGT +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPFPLHV*GQSLIR
Trigger: ACGTATGAGACTCTGGCCTCAGACATGCAGTGGAAA...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CTTCCTCTGGTCCCTCTGGGCTGGGTTTTCCCCCAGAGTTCTGTTCAAGCTCTACCATCTGAAGAGCCATaGTGGTCTGCTCCACAGCCT +
Preference number: 4 (lower is better)
Translates to: LPLVPLGWVFPQSSVQALPSEEP*WSAPQP
Trigger: AGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGG...TAGAGCTTGAACAGAACTCTGGGGGAAAACCCAGCCCAGAGGGACCAGAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TGCGGCATGAGATGCACAGCAAACTGGTCCATGGGAAGGCAGTCATCCTCAATGGTGGCGAATGCCCACTaGACCTCGGCTCTCATGGAA +
Preference number: 4 (lower is better)
Translates to: CGMRCTANWSMGRQSSSMVANAH*TSALME
Trigger: TTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCAC...CATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGTGGCGAATGCCCACTaGACCTCGGCTCTCATGGAA +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEVANAH*TSALME
Trigger: TTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCAC...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTGGTGGTGTTGCCGCGTaGAGCTTCTTCACCATCTCG +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGGGVAA*SFFTIS
Trigger: CGAGATGGTGAAGAAGCTGCACGCGGCAACACCACC...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCGCTAAGGTTAGCAGATaGGGCATGAGATGCACAGCA +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPAKVSR*GMRCTA
Trigger: TGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGC...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTAGAGCCATGATGGTCTaGTCCACAGCCTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGRAMMV*STASWW
Trigger: CCACCAGGAGGCTGTGGAGCAGACCATCATGGCTCT...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGGTTGAGGACGCTGTaGTCATGGCATCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQERLRTL*SWHLRR
Trigger: TCTCCGAAGATGCCATGAGCACAGCGTCCTCAACCT...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGCACATGCGTGGCGAATaGCCACTGAACCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEHMRGE*PLNLGS
Trigger: AGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTG...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCACATGCGTGGCGAATaGCCACTGAACCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGHMRGE*PLNLGS
Trigger: AGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTG...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGGGACAGGGCACACTTTaGTCTCCACATCAAATCGTT +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAGQGTL*SPHQIV
Trigger: AACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCC...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAATTCCTCTGGTCCCTCTaGGCTGGGTTTTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEFLWSL*AGFSPR
Trigger: TCTGGGGGAAAACCCAGCCCAGAGGGACCAGAGGAA...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGTTCCTCTGGTCCCTCTaGGCTGGGTTTTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEFLWSL*AGFSPR
Trigger: TCTGGGGGAAAACCCAGCCCAGAGGGACCAGAGGAA...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGCATGTGCATCCAGGCTaGAAGCACGTAGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEHVHPG*KHVVQR
Trigger: CCGCTGCACTACGTGCTTCCAGCCTGGATGCACATG...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCAGATGCACAGCAAACTaGTCCATGGGAAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPRCTAN*SMGRQS
Trigger: TGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCT...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCCCAGGTCACATGCGTaGCGAATGCCCACTGAACCT +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGPRSHA*RMPTEP
Trigger: AGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGG...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTCCCAGGTCACATGCGTaGCGAATGCCCACTGAACCT +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAPRSHA*RMPTEP
Trigger: AGGTTCAGTGGGCATTCGCCACGCATGTGACCTGGG...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACTCCTGCAGGTCCTCCTaGAGCAGCGAGAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: TLCNILPNHGSHFAHYSHSCRSS*SSERSA
Trigger: GGCGGACCTCTCGCTGCTTCAGGAGGACCTGCAGGA...GTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCCAGACCTTTCGAACGTaGAACATTCTGCAATCGCAG +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPQTFRT*NILQSQ
Trigger: CTGCGATTGCAGAATGTTTCACGTTCGAAAGGTCTG...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGTTGACATGTTGCACATaGAACCGCCATGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVALTCCT*NRHEAF
Trigger: GAATGCTTCATGGCGGTTTCATGTGCAACATGTCAA...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGAGTATCCTCTGGCCTaGCTTGTACATCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEEYPLA*LVHPLG
Trigger: CCCCAGAGGATGTACAAGTCAGGCCAGAGGATACTC...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GACATCGCTGTCACGGTCCATCTGAAGAGCCATGATGGTCTGCTCCACAGCCTCTTTCCACTGCATGTCTaGGGCCAGAGTCTCATACGT +
Preference number: 4 (lower is better)
Translates to: DIAVTVHLKSHDGLLHSLFPLHV*GQSLIR
Trigger: ACGTATGAGACTCTGGCCTCAGACATGCAGTGGAAA...GAGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGGACCGTGACAGCGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAATTAGCAGATGCGGCATaGGATGCACAGCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQELADAA*DAQQTG
Trigger: ACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAA...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGCTGTCACGGTCCATCTaGAGAGCCATGATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGELSRSI*RAMMVC
Trigger: GCAGACCATCATGGCTCTTCAGATGGACCGTGACAG...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCTGCTTGCAAAATACTTaGCATCGCTGTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPCLQNT*HRCHGP
Trigger: TGGACCGTGACAGCGATGTCAAGTATTTTGCAAGCA...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGAGCCTTCTAGTAGGTTaGGGACGCTGTGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGESLLVG*GRCAHG
Trigger: GCCATGAGCACAGCGTCCTCAACCTACTAGAAGGCT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAGTCCAGGGATCCGTCTaGGTCCTCCTGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LVSTSNRSMSSCSNRASKVQGSV*VLLQVL
Trigger: GAGGACCTGCAGGAGGACGCAGACGGATCCCTGGAC...TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAACGTTCAATGAGCTCCTaGTCCAACAGAGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKRSMSS*SNRASK
Trigger: TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACG...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGACCAGGGAGGCTATATaGACAGTGCTTAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVATREAI*TVLSNF
Trigger: GAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGT...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TTGATGAGGTCCACTCCGAACGTTGGTGGTGTTGCCGCGTGCAGCTTCTTCACCACAAAGACAAAGGCTTaGCGACCAGACCACTTGGGA +
Preference number: 4 (lower is better)
Translates to: LMRSTPNVGGVAACSFFTTKTKA*RPDHLG
Trigger: TCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGT...GGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAACAAAGACAAAGGCTTaGCGACCAGACCACTTGGGA +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKTKTKA*RPDHLG
Trigger: TCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGT...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGATGCCTCAGCAGCATaGTCTTCCATCGTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKDASAA*SSIVFS
Trigger: GGAAAACACGATGGAAGACCATGCTGCTGAGGCATC...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CCGCAACATGGCCTCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTGCTCACTCCGAACGTTGGTaGTGTTGCCGCGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PQHGLKSRSSAQNTVLLAHSERW*CCRVQL
Trigger: AAGCTGCACGCGGCAACACCACCAACGTTCGGAGTG...AGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCATGTTGCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAACAGCAAACTGGTCCATaGGAAGGCAGTCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKQQTGP*EGSHPQ
Trigger: TTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTG...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAAGATGCACAGCAAACTaGTCCATGGGAAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKRCTAN*SMGRQS
Trigger: TGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCT...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAACAAAACAGTGCGATGTaGGGCACCTGTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEQNSAM*GTCSIS
Trigger: GCTGATGGAACAGGTGCCTCACATCGCACTGTTTTG...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GCACCTGTTCCATCAGCTCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCCAAAACAGTGCGATGTaGGGCACCTGTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: APVPSAPLSQLVLNHRPIQNSAM*GTCSIS
Trigger: GCTGATGGAACAGGTGCCTCACATCGCACTGTTTTG...GATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGCTGATGGAACAGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR TCA 90 bp AATGACAGTCTGGCAGACAAAGACAAAGGCTTGCCGACCAGACCACTTGGGACAGAGTATCCTCTGGCCTaGCTTGTACATCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: NDSLADKDKGLPTRPLGTEYPLA*LVHPLG
Trigger: CCCCAGAGGATGTACAAGTCAGGCCAGAGGATACTC...TGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGAACTTGCACCTGCAATaGAGTCCGCAGGAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGENLHLQ*SPQERK
Trigger: CTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp CATATGGTATTGAAGGCCGGTTTTCTTGACAAAACAGTGCGATGTGAGGCACCTGTCCAGGGATCCGTCTaGGTCCTCCTGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: HMVLKAGFLDKTVRCEAPVQGSV*VLLQVL
Trigger: GAGGACCTGCAGGAGGACGCAGACGGATCCCTGGAC...AGGTGCCTCACATCGCACTGTTTTGTCAAGAAAACCGGCCTTCAATACCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR GCA 90 bp CTCATTGATGAGGTCCACTCCGAACGTTGGTGGTGTTGCCGCGTGCAGCTTCTTCGTTCAATGAGCTCCTaGTCCAACAGAGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LIDEVHSERWWCCRVQLLRSMSS*SNRASK
Trigger: TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACG...AAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp TGCGGCATGAGATGCACAGCAAACTGGTCCATGGGAAGGCAGTCATCCTCAATGGATGGTCTCTTCATGTaGATCCAGGCTGGAAGCACG +
Preference number: 4 (lower is better)
Translates to: CGMRCTANWSMGRQSSSMDGLFM*IQAGST
Trigger: CGTGCTTCCAGCCTGGATGCACATGAAGAGACCATC...CATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAACCACTTGGGACATCTaGCAAAGTTCTCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKTTWDI*QSSPQA
Trigger: AGCTTGTGGAGAACTTTGGCAGATGTCCCAAGTGGT...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAGGCAGGGTGGATGCTTaGAAAATACTTGACATCGCT +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEGRVDA*KILDIA
Trigger: AGCGATGTCAAGTATTTTGCAAGCATCCACCCTGCC...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTAGGTTGAGGACGCTGTaGTCATGGCATCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQARLRTL*SWHLRR
Trigger: TCTCCGAAGATGCCATGAGCACAGCGTCCTCAACCT...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCCACACCAAATCCGTCTaGGTCCTCCTGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVHTKSV*VLLQVL
Trigger: GAGGACCTGCAGGAGGACGCAGACGGATTTGGTGTG...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAACTGAATCTTGTGAAGTaGTGCCAACCTCTGGTCGTA +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQELNLVK*CQPLVV
Trigger: TACGACCAGAGGTTGGCACCACTTCACAAGATTCAG...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGGGAGTCCTCCAGAAATaGAAGGAGTTATACAATTCC +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAGVLQK*KELYNS
Trigger: GGAATTGTATAACTCCTTCCATTTCTGGAGGACTCC...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACTTTGCTGGTCCCTCTGGGCTaGGTTTTCCCCCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: TSSLLSGAVSSMRTGHTLLVPLG*VFPQSS
Trigger: AGAACTCTGGGGGAAAACCCAGCCCAGAGGGACCAG...CAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCCTGGTCCCTCTGGGCTaGGTTTTCCCCCAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVLVPLG*VFPQSS
Trigger: AGAACTCTGGGGGAAAACCCAGCCCAGAGGGACCAG...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTGCCGACCAGACCACTTaGGACATCTGCCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAADQTT*DICQSS
Trigger: AGAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGC...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGCCGACCAGACCACTTaGGACATCTGCCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEADQTT*DICQSS
Trigger: AGAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGC...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCTCCTCAATGACAGTCTaGCAGACAAAGACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPSSMTV*QTKTKA
Trigger: AGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAGGA...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR CAA 72 bp TCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACTTaGGTCTCCACATCAAATCGTTCAATGAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGAVSSMRTGHT*VSTSNRSMSSC
Trigger: GCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
3UTR CAA 72 bp CACTTGGGACATCTGCCAAAGTTCTCCACAAGCTCATaGATGAGGTCCACTCCGAACGTTGGTGGTGTTGCC +
Preference number: 4 (lower is better)
Translates to: HLGHLPKFSTSS*MRSTPNVGGVA
Trigger: GGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTTGGCAGATGTCCCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTTCCTGCAGGTCCTCCTaGAGCAGCGAGAGGTCCGCC +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLSCRSS*SSERSA
Trigger: GGCGGACCTCTCGCTGCTTCAGGAGGACCTGCAGGA...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAACAACATTTCATCTTGTaGGACAAAGTCCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEQHFIL*DKVQGS
Trigger: GGATCCCTGGACTTTGTCTCACAAGATGAAATGTTG...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000400555.7
CDS-3UTR TCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGAAAAGCATATGGTATTaGAGGCCGGTTTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAKSIWY*RPVFLT
Trigger: TGTCAAGAAAACCGGCCTTCAATACCATATGCTTTT...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GTCCAGATAATGTCACTGGCCCTCCGCAACATGGCCTCAAGTCCCGATCTTCTGCATCAAATCGTTCAATaGGCTCCTGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: VQIMSLALRNMASSPDLLHQIVQ*APAPTE
Trigger: CTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATG...CAGAAGATCGGGACTTGAGGCCATGTTGCGGAGGGCCAGTGACATTATCTGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp AGCTCTATGAGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCGGGCTGTCAGCTCTATaGGGACAGGGCACACTTTGG +
Preference number: 4 (lower is better)
Translates to: SSMRTGHTLVSTSNRSMSGLSAL*GQGTLW
Trigger: CCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCC...GCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTCATAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp AATGACAGTCTGGCAGACAAAGACAAAGGCTTGCCGACCAGACCACTTGGGACAAAAGGTCCCAGAGACTaGAAAGCTGCTTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: NDSLADKDKGLPTRPLGTKGPRD*KAAWRT
Trigger: GGTTCGCCAAGCAGCTTTTCAGTCTCTGGGACCTTT...TGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCTCTCAACAGCATCGCTaGTTAAAGGCACAGAATCTT +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPSQQHR*LKAQNL
Trigger: AAGATTCTGTGCCTTTAATCAGCGATGCTGTTGAGA...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGTTTCCACTGCATGTCTaGGGCCAGAGTCTCATACGT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEFPLHV*GQSLIR
Trigger: ACGTATGAGACTCTGGCCTCAGACATGCAGTGGAAA...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCGGCAGTCATCCTCAATaGCAGTCTGGCAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSGSHPQ*QSGRQR
Trigger: TCTTTGTCTGCCAGACTGTCATTGAGGATGACTGCC...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGCAGTCATCCTCAATaGCAGTCTGGCAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEGSHPQ*QSGRQR
Trigger: TCTTTGTCTGCCAGACTGTCATTGAGGATGACTGCC...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTGGCAGTCATCCTCAATaGCAGTCTGGCAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAGSHPQ*QSGRQR
Trigger: TCTTTGTCTGCCAGACTGTCATTGAGGATGACTGCC...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCTTAGCAGATGCGGCATaGGATGCACAGCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSLADAA*DAQQTG
Trigger: ACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAA...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGAGCCTTCTAGTAGGTTaGGGACGCTGTGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: HFGLHIKSFNELLLQQSQSLLVG*GRCAHG
Trigger: GCCATGAGCACAGCGTCCTCAACCTACTAGAAGGCT...CTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGQSQQS*LTCFPH
Trigger: GTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTG...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTCAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAQSQQS*LTCFPH
Trigger: GTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTG...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCCGTTCAATGAGCTCCTaGTCCAACAGAGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSRSMSS*SNRASK
Trigger: TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACG...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAGAACGTGAAACATTCTaGAATCGCAGCACATCTCAC +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEERETF*NRSTSH
Trigger: GTGAGATGTGCTGCGATTGCAGAATGTTTCACGTTC...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGAACGTGAAACATTCTaGAATCGCAGCACATCTCAC +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKERETF*NRSTSH
Trigger: GTGAGATGTGCTGCGATTGCAGAATGTTTCACGTTC...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAATCTTGTGAAGTGGTaGCAACCTCTGGTCGTAACA +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQENLVKW*QPLVVT
Trigger: TGTTACGACCAGAGGTTGGCACCACTTCACAAGATT...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGAGTGTCAACCGTCTGTaGACGAGAAGGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGESVNRL*TRRVSH
Trigger: ATGACTGACCCTTCTCGTGCACAGACGGTTGACACT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTAGTGTCAACCGTCTGTaGACGAGAAGGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQASVNRL*TRRVSH
Trigger: ATGACTGACCCTTCTCGTGCACAGACGGTTGACACT...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCGTCTCTCTCAGGCAGTaGCAATTCTGTCTTCCGAGT +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSVSLRQ*QFCLPS
Trigger: ACTCGGAAGACAGAATTGGCACTGCCTGAGAGAGAC...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TCCAGGCTGGAAGCACGTAGTGCAGCGGACAGCACTTCCACTTGTGCTTTAACAAGATGCGGCATGAGATaGACAGCAAACTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: SRLEARSAADSTSTCALTRCGMR*TANWSM
Trigger: CATGGACCAGTTTGCTGTGCATCTCATGCCGCATCT...TGTTAAAGCACAAGTGGAAGTGCTGTCCGCTGCACTACGTGCTTCCAGCCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp CAGCATACTTGTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTGAGACAACTCCAATCATCCGTCTaGGTCCTCCTGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QHTCPISPGASTFHLVRQLQSSV*VLLQVL
Trigger: GAGGACCTGCAGGAGGACGCAGACGGATGATTGGAG...TTGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR CCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGATGCCTCAGCAGCATaGTCTTCCATCGTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEDASAA*SSIVFS
Trigger: GGAAAACACGATGGAAGACCATGCTGCTGAGGCATC...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CTCATTGATGAGGTCCACTCCGAACGTTGGTGGTGTTGCCGCGTGCAGCTTCTTCTGAATCTTGTGAAGTaGTGCCAACCTCTGGTCGTA +
Preference number: 4 (lower is better)
Translates to: LIDEVHSERWWCCRVQLLLNLVK*CQPLVV
Trigger: TACGACCAGAGGTTGGCACCACTTCACAAGATTCAG...AAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGTCTGGATCATCAATGTaGGGCTCTAGATTTTCTATC +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVASGSSM*GSRFSI
Trigger: GATAGAAAATCTAGAGCCCCACATTGATGATCCAGA...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TGTTTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACATGTGCATCCAGGCTaGAAGCACGTAGTGCAGCGG +
Preference number: 4 (lower is better)
Translates to: CFHIIIAIWGCQLYEDRAHVHPG*KHVVQR
Trigger: CCGCTGCACTACGTGCTTCCAGCCTGGATGCACATG...TGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp TTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAATGGCCCTCCGCAACATaGCCTCAAGTCCCGATCTTC +
Preference number: 4 (lower is better)
Translates to: LVSTSNRSMSSCSNRASKWPSAT*PQVPIF
Trigger: GAAGATCGGGACTTGAGGCCATGTTGCGGAGGGCCA...TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTCTGCAAGCTCGTGGATaGAGAATGCTAGAGTTCGTC +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQALQARG*RMLEFV
Trigger: GACGAACTCTAGCATTCTCCATCCACGAGCTTGCAG...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAATCCTCAATGACAGTCTaGCAGACAAAGACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKSSMTV*QTKTKA
Trigger: AGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAGGA...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTTGCTCCACAGCCTCCTaGTGGCAGCTGGCAGAGGCC +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLCSTAS*WQLAEA
Trigger: GGCCTCTGCCAGCTGCCACCAGGAGGCTGTGGAGCA...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAATTGGTACTGGCAGGGTaGATGCTTGCAAAATACTTG +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQELVLAG*MLAKYL
Trigger: CAAGTATTTTGCAAGCATCCACCCTGCCAGTACCAA...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTCGGAGATTTTGGTACTaGCAGGGTGGATGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQARRFWY*QGGCLQ
Trigger: TTGCAAGCATCCACCCTGCCAGTACCAAAATCTCCG...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGCATCTTCGGAGATTTTaGTACTGGCAGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEHLRRF*YWQGGC
Trigger: GCATCCACCCTGCCAGTACCAAAATCTCCGAAGATG...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTAGGACGCTGTGCTCATaGCATCTTCGGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQARTLCS*HLRRFW
Trigger: CCAAAATCTCCGAAGATGCCATGAGCACAGCGTCCT...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ATAAGACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAAGGTCCGCCATCTTGTaGTCGCCCCCTCCTCCGCGG +
Preference number: 4 (lower is better)
Translates to: IRRSVISFPTMGAILHIIRSAIL*SPPPPR
Trigger: CCGCGGAGGAGGGGGCGACCACAAGATGGCGGACCT...TATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGTCTTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578875.5
CDS-3UTR TCA 90 bp CACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAACAGTGCGATGTaGGGCACCTGTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: HFGLHIKSFNELLLQQSQQNSAM*GTCSIS
Trigger: GCTGATGGAACAGGTGCCTCACATCGCACTGTTTTG...CTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCATCAAATCGTTCAATaGGCTCCTGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGHQIVQ*APAPTE
Trigger: CTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATG...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGTCCGTCGGATTTCTTaGCATGTTGCACATGAAACC +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEVRRIS*HVAHET
Trigger: GGTTTCATGTGCAACATGTCAAGAAATCCGACGGAC...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGTTTAAAATACTGGCCTaGGCTAGATGGATTAGCAAA +
Preference number: 4 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAFKILA*ARWISK
Trigger: TTTGCTAATCCATCTAGCTCAGGCCAGTATTTTAAA...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTACTAACACTGAGATCTaGAGGAGTATCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQATNTEI*RSILWP
Trigger: AGGCCAGAGGATACTCCTTCAGATCTCAGTGTTAGT...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAATCTGCAGCTGTCAATTaGTCTCCAAGAATAACTGCA +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKSAAVN*SPRITA
Trigger: TGCAGTTATTCTTGGAGATCAATTGACAGCTGCAGA...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ATTGGCAGCACAGACCTTTCGAACGTGAAACATTCTGCAATCGCAGCACATCTCCTGTCACGGTCCATCTaGAGAGCCATGATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: IGSTDLSNVKHSAIAAHLLSRSI*RAMMVC
Trigger: GCAGACCATCATGGCTCTTCAGATGGACCGTGACAG...GAGATGTGCTGCGATTGCAGAATGTTTCACGTTCGAAAGGTCTGTGCTGCCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCGTCCAGGGATCCGTCTaGGTCCTCCTGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVVQGSV*VLLQVL
Trigger: GAGGACCTGCAGGAGGACGCAGACGGATCCCTGGAC...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400555.7
CDS-3UTR GCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAATTTCTTCAGTAGCTTaGTGGCCAACTACACTGCAA +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEISSVA*WPTTLQ
Trigger: TTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAAT...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAATTTCTTCAGTAGCTTaGTGGCCAACTACACTGCAA +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKISSVA*WPTTLQ
Trigger: TTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAAT...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAGCTGCCTGACTTGTAGGTTGAGGACGCTGTaGTCATGGCATCTTCGGAGA +
Preference number: 4 (lower is better)
Translates to: KSFNELLLQQSQQSCLTCRLRTL*SWHLRR
Trigger: TCTCCGAAGATGCCATGAGCACAGCGTCCTCAACCT...ACAAGTCAGGCAGCTTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGATCTGGGCACACGTCTaGCTTCAGGCTGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEIWAHV*LQAVRI
Trigger: AATTCTTACAGCCTGAAGGCAGACGTGTGCCCAGAT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTATCTGGGCACACGTCTaGCTTCAGGCTGTAAGAATT +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAIWAHV*LQAVRI
Trigger: AATTCTTACAGCCTGAAGGCAGACGTGTGCCCAGAT...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGCCCTCCTTTCCCATTTaGACACGTCACAAACGATTC +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEPSFPI*TRHKRF
Trigger: GAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGG...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TCCAGGCTGGAAGCACGTAGTGCAGCGGACAGCACTTCCACTTGTGCTTTAACAGGACAGGGCACACTTTaGTCTCCACATCAAATCGTT +
Preference number: 4 (lower is better)
Translates to: SRLEARSAADSTSTCALTGQGTL*SPHQIV
Trigger: AACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCC...TGTTAAAGCACAAGTGGAAGTGCTGTCCGCTGCACTACGTGCTTCCAGCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAATCTTCAGTAGCTTGCTaGCCAACTACACTGCAAATA +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQESSVAC*PTTLQI
Trigger: TATTTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGA...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGACTTGTACATCCTCTaGGGCTTCTTGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEDLYIL*GFLISG
Trigger: ACCAGAGATCAAGAAGCCCCAGAGGATGTACAAGTC...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGCTGAATCTTGTGAAGTaGTGCCAACCTCTGGTCGTA +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGELNLVK*CQPLVV
Trigger: TACGACCAGAGGTTGGCACCACTTCACAAGATTCAG...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAGCTGCCTGCAAGCTCGTGGATaGAGAATGCTAGAGTTCGTC +
Preference number: 4 (lower is better)
Translates to: LHIKSFNELLLQQSQQSCLQARG*RMLEFV
Trigger: GACGAACTCTAGCATTCTCCATCCACGAGCTTGCAG...GCAGCTTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGGCCGACCAGACCACTTaGGACATCTGCCAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: RAHFGLHIKSFNELLLQQADQTT*DICQSS
Trigger: AGAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGC...CTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CAA 72 bp TGGCAGACAAAGACAAAGGCTTGCCGACCAGACCACTaGGGACATCTGCCAAAGTTCTCCACAAGCTCATTG +
Preference number: 4 (lower is better)
Translates to: WQTKTKACRPDH*GHLPKFSTSSL
Trigger: CAATGAGCTTGTGGAGAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGTTGGCGAACCCAACGTaGAGGATCACTGATCAAATT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGELANPT*RITDQI
Trigger: AATTTGATCAGTGATCCTTCACGTTGGGTTCGCCAA...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGCTTTCTCTTGACTCTTaGAATCCCTGGTATTGGGTG +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGELSLDS*NPWYWV
Trigger: CACCCAATACCAGGGATTTCAAGAGTCAAGAGAAAG...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCTTCTTGACAAAACAGTaGGATGTGAGGCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSFLTKQ*DVRHLF
Trigger: GAACAGGTGCCTCACATCGCACTGTTTTGTCAAGAA...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTTTCTTGACAAAACAGTaGGATGTGAGGCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGFLTKQ*DVRHLF
Trigger: GAACAGGTGCCTCACATCGCACTGTTTTGTCAAGAA...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGAATCTTGTGAAGTGGTaGCAACCTCTGGTCGTAACA +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGENLVKW*QPLVVT
Trigger: TGTTACGACCAGAGGTTGGCACCACTTCACAAGATT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GAGCTGTCCAGTGGAACACTAATTTCACCTAGAGGCTTCCCGGATGCCTCAGCAGAATACTGTGTTGCTTaGTGCAGTGAAATGGTCCGA +
Preference number: 4 (lower is better)
Translates to: ELSSGTLISPRGFPDASAEYCVA*CSEMVR
Trigger: TCGGACCATTTCACTGCAGCAAGCAACACAGTATTC...TGCTGAGGCATCCGGGAAGCCTCTAGGTGAAATTAGTGTTCCACTGGACAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCACCAGGGAGGCTATATaGACAGTGCTTAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSTREAI*TVLSNF
Trigger: GAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGT...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AATGACAGTCTGGCAGACAAAGACAAAGGCTTGCCGACCAGACCACTTGGGACAACCACTTGGGACATCTaGCAAAGTTCTCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: NDSLADKDKGLPTRPLGTTTWDI*QSSPQA
Trigger: AGCTTGTGGAGAACTTTGGCAGATGTCCCAAGTGGT...TGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCAGATGCGGCATGAGATaGACAGCAAACTGGTCCATG +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVRCGMR*TANWSM
Trigger: CATGGACCAGTTTGCTGTGCATCTCATGCCGCATCT...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AAGACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACACCAAATCCGTCTaGGTCCTCCTGCAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: KTLCNILPNHGSHFAHYSHTKSV*VLLQVL
Trigger: GAGGACCTGCAGGAGGACGCAGACGGATTTGGTGTG...GCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578875.5
CDS-3UTR CCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCAAATATCTCCAAAATTaGCAGCACAGACCTTTCGAA +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPKYLQN*QHRPFE
Trigger: TTCGAAAGGTCTGTGCTGCCAATTTTGGAGATATTT...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAGTCCACTCCGAACGTTaGTGGTGTTGCCGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSVHSER*WCCRVQ
Trigger: CTGCACGCGGCAACACCACCAACGTTCGGAGTGGAC...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAATTGGTACTGGCAGGGTaGATGCTTGCAAAATACTTG +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEELVLAG*MLAKYL
Trigger: CAAGTATTTTGCAAGCATCCACCCTGCCAGTACCAA...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCGGAGATTTTGGTACTaGCAGGGTGGATGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: HFGLHIKSFNELLLQQSQRRFWY*QGGCLQ
Trigger: TTGCAAGCATCCACCCTGCCAGTACCAAAATCTCCG...CTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCCGGAGATTTTGGTACTaGCAGGGTGGATGCTTGCAA +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVRRFWY*QGGCLQ
Trigger: TTGCAAGCATCCACCCTGCCAGTACCAAAATCTCCG...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCATCTTCGGAGATTTTaGTACTGGCAGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: HFGLHIKSFNELLLQQSQHLRRF*YWQGGC
Trigger: GCATCCACCCTGCCAGTACCAAAATCTCCGAAGATG...CTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp GTTTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACAGGACGCTGTGCTCATaGCATCTTCGGAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: VFTSSLLSGAVSSMRTGHRTLCS*HLRRFW
Trigger: CCAAAATCTCCGAAGATGCCATGAGCACAGCGTCCT...GTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AGCTCTATGAGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCGAACCTCGGCTCTCATaGAAGCAGGAAAGACACCGA +
Preference number: 4 (lower is better)
Translates to: SSMRTGHTLVSTSNRSMSEPRLS*KQERHR
Trigger: TCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTC...GCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTCATAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CAA 72 bp ATCCTCAATGACAGTCTGGCAGACAAAGACAAAGGCTaGCCGACCAGACCACTTGGGACATCTGCCAAAGTT +
Preference number: 4 (lower is better)
Translates to: ILNDSLADKDKG*PTRPLGTSAKV
Trigger: AACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CAA 72 bp GTTGAGGACGCTGTGCTCATGGCATCTTCGGAGATTTaGGTACTGGCAGGGTGGATGCTTGCAAAATACTTG +
Preference number: 4 (lower is better)
Translates to: VEDAVLMASSEI*VLAGWMLAKYL
Trigger: CAAGTATTTTGCAAGCATCCACCCTGCCAGTACCAAAATCTCCGAAGATGCCATGAGCACAGCGTCCTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp CTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCCAAAACAGTGCGATGTaGGGCACCTGTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LCNILPNHGSHFAHYSHSQNSAM*GTCSIS
Trigger: GCTGATGGAACAGGTGCCTCACATCGCACTGTTTTG...GCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp AGGAAATCCAACGAACAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGGGCTGTCAGCTCTATaGGGACAGGGCACACTTTGG +
Preference number: 4 (lower is better)
Translates to: RKSNEQKKLCLHTDSEQWGLSAL*GQGTLW
Trigger: CCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCC...CCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCGTTGGATTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCCAGACCTTTCGAACGTaGAACATTCTGCAATCGCAG +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVQTFRT*NILQSQ
Trigger: CTGCGATTGCAGAATGTTTCACGTTCGAAAGGTCTG...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp TTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACTTCCTCTGGGGCTTCTTaGTCTCTGGTCCTATTTTTG +
Preference number: 4 (lower is better)
Translates to: FTSSLLSGAVSSMRTGHTSSGAS*SLVLFL
Trigger: CAAAAATAGGACCAGAGATCAAGAAGCCCCAGAGGA...AGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAATCTCAACAGCATCGCTaGTTAAAGGCACAGAATCTT +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEESQQHR*LKAQNL
Trigger: AAGATTCTGTGCCTTTAATCAGCGATGCTGTTGAGA...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTTCTGCAGCTGTCAATTaGTCTCCAAGAATAACTGCA +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGSAAVN*SPRITA
Trigger: TGCAGTTATTCTTGGAGATCAATTGACAGCTGCAGA...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCTTGCAAAATACTTaGCATCGCTGTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVCLQNT*HRCHGP
Trigger: TGGACCGTGACAGCGATGTCAAGTATTTTGCAAGCA...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGCTCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCCGTTCAATGAGCTCCTaGTCCAACAGAGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: SSALTVGSESSANLLILSRSMSS*SNRASK
Trigger: TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACG...GGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR GCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCGCTGGCCAACTACACTaGAAATATCTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSAGQLH*KYLQNW
Trigger: CCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAGC...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCATCTCCAAGAATAACTaGAAGCTCGTGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSISKNN*KLVDGE
Trigger: TTCTCCATCCACGAGCTTGCAGTTATTCTTGGAGAT...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAAATTGGAACCAGATCTaGAGCTGTCAATTGATCTCC +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEENWNQI*SCQLIS
Trigger: GGAGATCAATTGACAGCTGCAGATCTGGTTCCAATT...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGGTGGTGTTGCCGCGTaGAGCTTCTTCACCATCTCG +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLGGVAA*SFFTIS
Trigger: CGAGATGGTGAAGAAGCTGCACGCGGCAACACCACC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp CTGTTAAATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCCAGGGGCGTCTTCCCCTCTACACTGTaGTTCTTGGGGGCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: LLNMFSLAAYLSNLPRGVFPSTL*FLGAKE
Trigger: TTCCTTAGCCCCCAAGAAGCACAGTGTAGAGGGGAA...GACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR CCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCTCTTCAGTAGCTTGCTaGCCAACTACACTGCAAATA +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSSSVAC*PTTLQI
Trigger: TATTTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGA...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGGGCTTCTTGATCTCTaGTCCTATTTTTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKGLLDL*SYFCFL
Trigger: TAGAAAACAAAAATAGGACCAGAGATCAAGAAGCCC...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGGACTTGTACATCCTCTaGGGCTTCTTGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: RAHFGLHIKSFNELLLQQDLYIL*GFLISG
Trigger: ACCAGAGATCAAGAAGCCCCAGAGGATGTACAAGTC...CTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGGAGTCCTCCAGAAATaGAAGGAGTTATACAATTCC +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEGVLQK*KELYNS
Trigger: GGAATTGTATAACTCCTTCCATTTCTGGAGGACTCC...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTGCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTGGGGCTTTCCTCTGGTCCCTCTaGGCTGGGTTTTCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: LHIIATASVFTSSLLSGAFLWSL*AGFSPR
Trigger: TCTGGGGGAAAACCCAGCCCAGAGGGACCAGAGGAA...AGCCCCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCTTGTGCTTTAACATCTaGATCATCAATGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSLCFNI*IINVGL
Trigger: GAGCCCCACATTGATGATCCAGATGTTAAAGCACAA...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAATTGTGCTTTAACATCTaGATCATCAATGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEELCFNI*IINVGL
Trigger: GAGCCCCACATTGATGATCCAGATGTTAAAGCACAA...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGATAACTGCAAGCTCGTaGATGGAGAATGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEITASS*MENARV
Trigger: AACTCTAGCATTCTCCATCCACGAGCTTGCAGTTAT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCACAGATTCAGAGCAATaGGACGTAAATAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPTDSEQ*DVNSHK
Trigger: TTTATGACTATTTACGTCCCATTGCTCTGAATCTGT...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCACTCCGAACGTTGGTaGTGTTGCCGCGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVHSERW*CCRVQL
Trigger: AAGCTGCACGCGGCAACACCACCAACGTTCGGAGTG...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCACACTCCGAACGTTGGTaGTGTTGCCGCGTGCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSHSERW*CCRVQL
Trigger: AAGCTGCACGCGGCAACACCACCAACGTTCGGAGTG...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ACTTGTAGGAAATCCAACGAACAGAAGAAACTTTGTCTGCACACAGATTCAGAGGTCCACTCCGAACGTTaGTGGTGTTGCCGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: TCRKSNEQKKLCLHTDSEVHSER*WCCRVQ
Trigger: CTGCACGCGGCAACACCACCAACGTTCGGAGTGGAC...CTCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCGTTGGATTTCCTACAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AAGACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCCTCCTGGTGGCAGCTaGCAGAGGCCAAGAAATAGT +
Preference number: 4 (lower is better)
Translates to: KTLCNILPNHGSHFAHYSPPGGS*QRPRNS
Trigger: ACTATTTCTTGGCCTCTGCCAGCTGCCACCAGGAGG...GCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CAA 72 bp GGCCTCAAGTCCCGATCTTCTGCTCAGAATACTGTGTaGCTTGCTGCAGTGAAATGGTCCGATCAGAAACAA +
Preference number: 4 (lower is better)
Translates to: GLKSRSSAQNTV*LAAVKWSDQKQ
Trigger: TTGTTTCTGATCGGACCATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TGCGGCATGAGATGCACAGCAAACTGGTCCATGGGAAGGCAGTCATCCTCAATGAAAAGCATATGGTATTaGAGGCCGGTTTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: CGMRCTANWSMGRQSSSMKSIWY*RPVFLT
Trigger: TGTCAAGAAAACCGGCCTTCAATACCATATGCTTTT...CATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCTCATGCCGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp AAACAGTGCGATGTGAGGCACCTGTTCCATCAGCTCCGCTCTCACAGTTGGTTCAAAAGCATATGGTATTaGAGGCCGGTTTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: KQCDVRHLFHQLRSHSWFKSIWY*RPVFLT
Trigger: TGTCAAGAAAACCGGCCTTCAATACCATATGCTTTT...GAACCAACTGTGAGAGCGGAGCTGATGGAACAGGTGCCTCACATCGCACTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR TCA 90 bp TTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAGTCCGTCGGATTTCTTaGCATGTTGCACATGAAACC +
Preference number: 4 (lower is better)
Translates to: LVSTSNRSMSSCSNRASKVRRIS*HVAHET
Trigger: GGTTTCATGTGCAACATGTCAAGAAATCCGACGGAC...TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCGAGTATCCTCTGGCCTaGCTTGTACATCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVEYPLA*LVHPLG
Trigger: CCCCAGAGGATGTACAAGTCAGGCCAGAGGATACTC...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GAGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCTCTCAACAGCATCGCTaGTTAAAGGCACAGAATCTT +
Preference number: 4 (lower is better)
Translates to: EDRAHFGLHIKSFNELLLSQQHR*LKAQNL
Trigger: AAGATTCTGTGCCTTTAATCAGCGATGCTGTTGAGA...GAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TCCAGGCTGGAAGCACGTAGTGCAGCGGACAGCACTTCCACTTGTGCTTTAACAATTGTTGCTCAAGTCTaGATCGCTGTGAATATAGTG +
Preference number: 4 (lower is better)
Translates to: SRLEARSAADSTSTCALTIVAQV*IAVNIV
Trigger: CACTATATTCACAGCGATTCAGACTTGAGCAACAAT...TGTTAAAGCACAAGTGGAAGTGCTGTCCGCTGCACTACGTGCTTCCAGCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGATTGTTGCTCAAGTCTaGATCGCTGTGAATATAGTG +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEIVAQV*IAVNIV
Trigger: CACTATATTCACAGCGATTCAGACTTGAGCAACAAT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTAGCCTTCTAGTAGGTTaGGGACGCTGTGCTCATGGC +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLSLLVG*GRCAHG
Trigger: GCCATGAGCACAGCGTCCTCAACCTACTAGAAGGCT...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAATACTGTACTTTCTCTTaGCTCTTGAAATCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEYCTFS*LLKSLV
Trigger: TACCAGGGATTTCAAGAGTCAAGAGAAAGTACAGTA...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CAGACTTCCCTCAAGGTATCGAGCAAACTCCGGGCCACCATTTGTCTGTTAAATCAACATTTCATCTTGTaGGACAAAGTCCAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QTSLKVSSKLRATICLLNQHFIL*DKVQGW
Trigger: CCAGCCCTGGACTTTGTCTCACAAGATGAAATGTTG...ATTTAACAGACAAATGGTGGCCCGGAGTTTGCTCGATACCTTGAGGGAAGTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR GCA 90 bp GTTTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACTTCTTGACAAAACAGTaGGATGTGAGGCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: VFTSSLLSGAVSSMRTGHFLTKQ*DVRHLF
Trigger: GAACAGGTGCCTCACATCGCACTGTTTTGTCAAGAA...GTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR GCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAACTGATTATTCTGATCTaGAAGGTATCTAACCACAAT +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKLIILI*KVSNHN
Trigger: ATTGTGGTTAGATACCTTGCAGATCAGAATAATCAG...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TCGCAGCACATCTCACAAAACCTAGGGAGGATAAGACGCTCTGTAATATCCTTCCAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SQHISQNLGRIRRSVISFQSQQS*LTCFPH
Trigger: GTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTG...GAAGGATATTACAGAGCGTCTTATCCTCCCTAGGTTTTGTGAGATGTGCTGCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp CATGGGAAGGCAGTCATCCTCAATGACAGTCTGGCAGACAAAGACAAAGGCTTGACCAGGGAGGCTATATaGACAGTGCTTAGCAATTTC +
Preference number: 4 (lower is better)
Translates to: HGKAVILNDSLADKDKGLTREAI*TVLSNF
Trigger: GAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGT...CAAGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAGGATGACTGCCTTCCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp AGCTGTTCAGCCAGTTCAGCTCGAAACCGCCAATTTCTACTATTATCTGTCACCGTCTCTCTCAGGCAGTaGCAATTCTGTCTTCCGAGT +
Preference number: 4 (lower is better)
Translates to: SCSASSARNRQFLLLSVTVSLRQ*QFCLPS
Trigger: ACTCGGAAGACAGAATTGGCACTGCCTGAGAGAGAC...GGTGACAGATAATAGTAGAAATTGGCGGTTTCGAGCTGAACTGGCTGAACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp CTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTTTTCACGCTAAGGTTAGCAGATaGGGCATGAGATGCACAGCA +
Preference number: 4 (lower is better)
Translates to: LPNHGSHFAHYSHSFCFHAKVSR*GMRCTA
Trigger: TGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGC...GTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp ATCATCGCAGACTTCCCTCAAGGTATCGAGCAAACTCCGGGCCACCATTTGTCTAATTTTTCACAGGTATaGCTTCCCCTCTACACTGTG +
Preference number: 4 (lower is better)
Translates to: IIADFPQGIEQTPGHHLSNFSQV*LPLYTV
Trigger: CACAGTGTAGAGGGGAAGGCATACCTGTGAAAAATT...AGACAAATGGTGGCCCGGAGTTTGCTCGATACCTTGAGGGAAGTCTGCGATGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGAAAGCTGGAAAAATCTaGGCAGCAACATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEKAGKI*AATFLQ
Trigger: CTGAAGAAATGTTGCTGCCCAGATTTTTCCAGCTTT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTAAAGCTGGAAAAATCTaGGCAGCAACATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGKAGKI*AATFLQ
Trigger: CTGAAGAAATGTTGCTGCCCAGATTTTTCCAGCTTT...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TCACAAAACCTAGGGAGGATAAGACGCTCTGTAATATCCTTCCCAACCATGGGAGATGCCTCAGCAGCATaGTCTTCCATCGTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SQNLGRIRRSVISFPTMGDASAA*SSIVFS
Trigger: GGAAAACACGATGGAAGACCATGCTGCTGAGGCATC...TCCCATGGTTGGGAAGGATATTACAGAGCGTCTTATCCTCCCTAGGTTTTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCTCTGGATCATCAATGTaGGGCTCTAGATTTTCTATC +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSSGSSM*GSRFSI
Trigger: GATAGAAAATCTAGAGCCCCACATTGATGATCCAGA...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAATCTGGATCATCAATGTaGGGCTCTAGATTTTCTATC +
Preference number: 4 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEESGSSM*GSRFSI
Trigger: GATAGAAAATCTAGAGCCCCACATTGATGATCCAGA...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAAATCCATTAAAAATTaGAACCAGATCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEKSIKN*NQICSC
Trigger: ACAGCTGCAGATCTGGTTCCAATTTTTAATGGATTT...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAAAATCCATTAAAAATTaGAACCAGATCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKKSIKN*NQICSC
Trigger: ACAGCTGCAGATCTGGTTCCAATTTTTAATGGATTT...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACTTGGTACTGGCAGGGTaGATGCTTGCAAAATACTTG +
Preference number: 4 (lower is better)
Translates to: FHIIIAIWGCQLYEDRAHLVLAG*MLAKYL
Trigger: CAAGTATTTTGCAAGCATCCACCCTGCCAGTACCAA...GTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp CAGACTTCCCTCAAGGTATCGAGCAAACTCCGGGCCACCATTTGTCTGTTAAATCTACACTGTGCTTCTTaGGGGCTAAGGAAGAAACTG +
Preference number: 4 (lower is better)
Translates to: QTSLKVSSKLRATICLLNLHCAS*GLRKKL
Trigger: CAGTTTCTTCCTTAGCCCCCAAGAAGCACAGTGTAG...ATTTAACAGACAAATGGTGGCCCGGAGTTTGCTCGATACCTTGAGGGAAGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR TCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCACAAAACAGTGCGATGTaGGGCACCTGTTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSQNSAM*GTCSIS
Trigger: GCTGATGGAACAGGTGCCTCACATCGCACTGTTTTG...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp TCGCAGCACATCTCACAAAACCTAGGGAGGATAAGACGCTCTGTAATATCCTTCCAGACCTTTCGAACGTaGAACATTCTGCAATCGCAG +
Preference number: 4 (lower is better)
Translates to: SQHISQNLGRIRRSVISFQTFRT*NILQSQ
Trigger: CTGCGATTGCAGAATGTTTCACGTTCGAAAGGTCTG...GAAGGATATTACAGAGCGTCTTATCCTCCCTAGGTTTTGTGAGATGTGCTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAATTGGCGAACCCAACGTaGAGGATCACTGATCAAATT +
Preference number: 4 (lower is better)
Translates to: FGLHIKSFNELLLQQSQQLANPT*RITDQI
Trigger: AATTTGATCAGTGATCCTTCACGTTGGGTTCGCCAA...TTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAAAAGGTCCCAGAGACTaGAAAGCTGCTTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSKGPRD*KAAWRT
Trigger: GGTTCGCCAAGCAGCTTTTCAGTCTCTGGGACCTTT...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTTTTCACACTAACACTGAGATCTaGAGGAGTATCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LPNHGSHFAHYSHSFCFHTNTEI*RSILWP
Trigger: AGGCCAGAGGATACTCCTTCAGATCTCAGTGTTAGT...GTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAGTTATACAATTCCTaGTCTAAGAGAGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEELYNS*SKRAES
Trigger: AGATTCAGCTCTCTTAGATCAGGAATTGTATAACTC...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTGAGTTATACAATTCCTaGTCTAAGAGAGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAELYNS*SKRAES
Trigger: AGATTCAGCTCTCTTAGATCAGGAATTGTATAACTC...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTTTCTCTTTTCTATACTaGTGGTCTCTTCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAFSFLY*WSLHVH
Trigger: ATGCACATGAAGAGACCATCAGTATAGAAAAGAGAA...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GCCTCAGCAGCATGGTCTTCCATCGTGTTTTCCAGTATGACACTGGAATTACTATGTTGCTTGCTGCAGTaGAATGGTCCGATCAGAAAC +
Preference number: 4 (lower is better)
Translates to: ASAAWSSIVFSSMTLELLCCLLQ*NGPIRN
Trigger: GTTTCTGATCGGACCATTTCACTGCAGCAAGCAACA...TAGTAATTCCAGTGTCATACTGGAAAACACGATGGAAGACCATGCTGCTGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp AGAGTTTGTCTTAATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCATGCTTGCAAAATACTTaGCATCGCTGTCACGGTCCA +
Preference number: 4 (lower is better)
Translates to: RVCLNVFASSTRTLGTLSCLQNT*HRCHGP
Trigger: TGGACCGTGACAGCGATGTCAAGTATTTTGCAAGCA...TGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp TGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCCAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: CNILPNHGSHFAHYSHSFQSQQS*LTCFPH
Trigger: GTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTG...GAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR GCA 90 bp TCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCAAACAGAGCCAGCAAAGCTaGCTGACTTGTTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SALTVGSESSANLLILSKQSQQS*LTCFPH
Trigger: GTGAGGAAAACAAGTCAGGCAGCTTTGCTGGCTCTG...TTTGGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR GCA 90 bp AATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTCGTTCAATGAGCTCCTaGTCCAACAGAGCCAGCAAA +
Preference number: 4 (lower is better)
Translates to: NILPNHGSHFAHYSHSFCRSMSS*SNRASK
Trigger: TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACG...ACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR GCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCGCTGGCCAACTACACTaGAAATATCTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVAGQLH*KYLQNW
Trigger: CCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAGC...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAGATGGTCTCTTCATGTaGATCCAGGCTGGAAGCACG +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSDGLFM*IQAGST
Trigger: CGTGCTTCCAGCCTGGATGCACATGAAGAGACCATC...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAACAAGTCCCGATCTTCTaGTCAGAATACTGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: LVSTSNRSMSSCSNRASKQVPIF*SEYCVA
Trigger: AGCAACACAGTATTCTGAGCAGAAGATCGGGACTTG...TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp GGAAATCCAACGAACAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGAGTGTCAACCGTCTGTaGACGAGAAGGGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GNPTNRRNFVCTQIQSNGSVNRL*TRRVSH
Trigger: ATGACTGACCCTTCTCGTGCACAGACGGTTGACACT...CCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCGTTGGATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp CTTGGGACATCTGCCAAAGTTCTCCACAAGCTCATTGATGAGGTCCACTCCGAAATCTCCAAGAATAACTaGAAGCTCGTGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: LGTSAKVLHKLIDEVHSEISKNN*KLVDGE
Trigger: TTCTCCATCCACGAGCTTGCAGTTATTCTTGGAGAT...TTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTTGGCAGATGTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGAGAAGAAACTTTGTCTaGACACAGATTCAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGERRNFV*TQIQSN
Trigger: ATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TCGCAGCACATCTCACAAAACCTAGGGAGGATAAGACGCTCTGTAATATCCTTCGGCAGGGTGGATGCTTaGAAAATACTTGACATCGCT +
Preference number: 4 (lower is better)
Translates to: SQHISQNLGRIRRSVISFGRVDA*KILDIA
Trigger: AGCGATGTCAAGTATTTTGCAAGCATCCACCCTGCC...GAAGGATATTACAGAGCGTCTTATCCTCCCTAGGTTTTGTGAGATGTGCTGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp ACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACTTTGTATCCTTCCCAACCATaGGAGCCATTTTGCACATTA +
Preference number: 4 (lower is better)
Translates to: TSSLLSGAVSSMRTGHTLYPSQP*EPFCTL
Trigger: TAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATA...CAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CCA 90 bp GAGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCAAAGCTGGAAAAATCTaGGCAGCAACATTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: EDRAHFGLHIKSFNELLLKAGKI*AATFLQ
Trigger: CTGAAGAAATGTTGCTGCCCAGATTTTTCCAGCTTT...GAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGGGCTTCTTGATCTCTaGTCCTATTTTTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEGLLDL*SYFCFL
Trigger: TAGAAAACAAAAATAGGACCAGAGATCAAGAAGCCC...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCATAACTGCAAGCTCGTaGATGGAGAATGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVITASS*MENARV
Trigger: AACTCTAGCATTCTCCATCCACGAGCTTGCAGTTAT...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGAAATCCAACGAACAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGAGATGCACAGCAAACTaGTCCATGGGAAGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GNPTNRRNFVCTQIQSNGRCTAN*SMGRQS
Trigger: TGACTGCCTTCCCATGGACCAGTTTGCTGTGCATCT...CCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCGTTGGATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGAACCTCGGCTCTCATaGAAGCAGGAAAGACACCGA +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLEPRLS*KQERHR
Trigger: TCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGGTCTCTTTCACATCTaGGCACACGTCTGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLGLFHI*AHVCLQ
Trigger: CTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCCAGGGGCGTCAACATTGACAAAGTCCAGGGCTaGCAGAGTGTTGAAACTCAT +
Preference number: 4 (lower is better)
Translates to: NMFSLAAYLSNLPRGVNIDKVQG*QSVETH
Trigger: ATGAGTTTCAACACTCTGCCAGCCCTGGACTTTGTC...AATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583092.1
3UTR CAA 72 bp CACATTATAGCCACAGCTTCTGTTTTCACATCATCATaGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGG +
Preference number: 4 (lower is better)
Translates to: HIIATASVFTSS*LSGAVSSMRTG
Trigger: CCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp GAGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCTTCTCTTTTCTATACTaGTGGTCTCTTCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: EDRAHFGLHIKSFNELLLFSFLY*WSLHVH
Trigger: ATGCACATGAAGAGACCATCAGTATAGAAAAGAGAA...GAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAATCTGCAGCTGTCAATTaGTCTCCAAGAATAACTGCA +
Preference number: 4 (lower is better)
Translates to: LVSTSNRSMSSCSNRASKSAAVN*SPRITA
Trigger: TGCAGTTATTCTTGGAGATCAATTGACAGCTGCAGA...TTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTTTAGCAGATGCGGCATaGGATGCACAGCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLLADAA*DAQQTG
Trigger: ACCAGTTTGCTGTGCATCTCATGCCGCATCTGCTAA...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGAAATATGTTCTCACTTaGAGCATACTTGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEKYVLT*SILVQS
Trigger: AGATTGGACAAGTATGCTGCAAGTGAGAACATATTT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGCTGTTCAGCCAGTTCAGCTCGAAACCGCCAATTTCTACTATTATCTGTCACCTTCTTGACAAAACAGTaGGATGTGAGGCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: SCSASSARNRQFLLLSVTFLTKQ*DVRHLF
Trigger: GAACAGGTGCCTCACATCGCACTGTTTTGTCAAGAA...GGTGACAGATAATAGTAGAAATTGGCGGTTTCGAGCTGAACTGGCTGAACAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCCTGATTATTCTGATCTaGAAGGTATCTAACCACAAT +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSLIILI*KVSNHN
Trigger: ATTGTGGTTAGATACCTTGCAGATCAGAATAATCAG...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCATTTGCTAAGGTTTACTGTGTTGCTTGCTaGAGTGAAATGGTCCGATCA +
Preference number: 4 (lower is better)
Translates to: NVFASSTRTLGTLSFAKVYCVAC*SEMVRS
Trigger: TGATCGGACCATTTCACTGCAGCAAGCAACACAGTA...AACCTTAGCAAATGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAGTCTCTCTCAGGCAGTaGCAATTCTGTCTTCCGAGT +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSVSLRQ*QFCLPS
Trigger: ACTCGGAAGACAGAATTGGCACTGCCTGAGAGAGAC...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATAAACATGGTGGTGTTGCCGCGTaGAGCTTCTTCACCATCTCG +
Preference number: 4 (lower is better)
Translates to: KLCLHTDSEQWDVNSHKHGGVAA*SFFTIS
Trigger: CGAGATGGTGAAGAAGCTGCACGCGGCAACACCACC...ATGTTTATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTACAAAGACAAAGGCTTaGCGACCAGACCACTTGGGA +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLTKTKA*RPDHLG
Trigger: TCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGT...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGCTAAGGTTAGCAGATaGGGCATGAGATGCACAGCA +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLAKVSR*GMRCTA
Trigger: TGCTGTGCATCTCATGCCGCATCTGCTAACCTTAGC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATAAACATCACATGCGTGGCGAATaGCCACTGAACCTCGGCTCT +
Preference number: 4 (lower is better)
Translates to: KLCLHTDSEQWDVNSHKHHMRGE*PLNLGS
Trigger: AGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTG...ATGTTTATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTGGACAGGGCACACTTTaGTCTCCACATCAAATCGTT +
Preference number: 4 (lower is better)
Translates to: NILPNHGSHFAHYSHSFCGQGTL*SPHQIV
Trigger: AACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCC...ACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CCA 90 bp AGCTGTTCAGCCAGTTCAGCTCGAAACCGCCAATTTCTACTATTATCTGTCACCATCATCATTGCTATCTaGGGCTGTCAGCTCTATGAG +
Preference number: 4 (lower is better)
Translates to: SCSASSARNRQFLLLSVTIIIAI*GCQLYE
Trigger: CTCATAGAGCTGACAGCCCCAGATAGCAATGATGAT...GGTGACAGATAATAGTAGAAATTGGCGGTTTCGAGCTGAACTGGCTGAACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCTCTTCTTTAAAATACTaGCCTGAGCTAGATGGATTA +
Preference number: 4 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSSSLKY*PELDGL
Trigger: TAATCCATCTAGCTCAGGCCAGTATTTTAAAGAAGA...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACGAATATAGTGAAGAGTaGAGTCCATATTCCTCACAC +
Preference number: 4 (lower is better)
Translates to: FHIIIAIWGCQLYEDRAHEYSEE*SPYSSH
Trigger: GTGTGAGGAATATGGACTCCACTCTTCACTATATTC...GTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTCTGCAAGCTCGTGGATaGAGAATGCTAGAGTTCGTC +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLLQARG*RMLEFV
Trigger: GACGAACTCTAGCATTCTCCATCCACGAGCTTGCAG...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTACAGATTCAGAGCAATaGGACGTAAATAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGTDSEQ*DVNSHK
Trigger: TTTATGACTATTTACGTCCCATTGCTCTGAATCTGT...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTCCTCAATGACAGTCTaGCAGACAAAGACAAAGGCT +
Preference number: 4 (lower is better)
Translates to: YSHSFCFHIIIAIWGCQLSSMTV*QTKTKA
Trigger: AGCCTTTGTCTTTGTCTGCCAGACTGTCATTGAGGA...GAGCTGACAGCCCCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCATCTTCGGAGATTTTaGTACTGGCAGGGTGGATGC +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVHLRRF*YWQGGC
Trigger: GCATCCACCCTGCCAGTACCAAAATCTCCGAAGATG...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AAGCATATGGTATTGAAGGCCGGTTTTCTTGACAAAACAGTGCGATGTGAGGCACAACATTTCATCTTGTaGGACAAAGTCCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: KHMVLKAGFLDKTVRCEAQHFIL*DKVQGS
Trigger: GGATCCCTGGACTTTGTCTCACAAGATGAAATGTTG...TGCCTCACATCGCACTGTTTTGTCAAGAAAACCGGCCTTCAATACCATATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR TCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCATCAAATCGTTCAATaGGCTCCTGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVHQIVQ*APAPTE
Trigger: CTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATG...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp GGAAATCCAACGAACAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGTTGACATGTTGCACATaGAACCGCCATGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: GNPTNRRNFVCTQIQSNGLTCCT*NRHEAF
Trigger: GAATGCTTCATGGCGGTTTCATGTGCAACATGTCAA...CCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCGTTGGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTTTAAAATACTGGCCTaGGCTAGATGGATTAGCAAA +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVFKILA*ARWISK
Trigger: TTTGCTAATCCATCTAGCTCAGGCCAGTATTTTAAA...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCATCCTCTGGGGCTTCTTaGTCTCTGGTCCTATTTTTG +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSSSGAS*SLVLFL
Trigger: CAAAAATAGGACCAGAGATCAAGAAGCCCCAGAGGA...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTTCCTCTGGGGCTTCTTaGTCTCTGGTCCTATTTTTG +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLSSGAS*SLVLFL
Trigger: CAAAAATAGGACCAGAGATCAAGAAGCCCCAGAGGA...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCAATCACATCAGACTCTaGGCTGTAGTCATCCACACC +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVNHIRL*AVVIHT
Trigger: GGTGTGGATGACTACAGCTCAGAGTCTGATGTGATT...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400556.8
CDS-3UTR TCA 90 bp ACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACGACAAAGTCCAGGGCTaGAGGTATAATAATCACATC +
Preference number: 4 (lower is better)
Translates to: TLCNILPNHGSHFAHYSHDKVQG*RYNNHI
Trigger: GATGTGATTATTATACCTTCAGCCCTGGACTTTGTC...GTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578875.5
CDS-3UTR TCA 90 bp TCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCAAAGGGCTGGCAGAGTGTTaGAACTCATGGTTGAATTTT +
Preference number: 4 (lower is better)
Translates to: SALTVGSESSANLLILSKGLAEC*NSWLNF
Trigger: AAAATTCAACCATGAGTTTCAACACTCTGCCAGCCC...TTTGGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR GCA 90 bp GGAAATCCAACGAACAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGAATCTTGTGAAGTGGTaGCAACCTCTGGTCGTAACA +
Preference number: 4 (lower is better)
Translates to: GNPTNRRNFVCTQIQSNGNLVKW*QPLVVT
Trigger: TGTTACGACCAGAGGTTGGCACCACTTCACAAGATT...CCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCGTTGGATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp AGCTGTTCAGCCAGTTCAGCTCGAAACCGCCAATTTCTACTATTATCTGTCACCAATTGGAACCAGATCTaGAGCTGTCAATTGATCTCC +
Preference number: 4 (lower is better)
Translates to: SCSASSARNRQFLLLSVTNWNQI*SCQLIS
Trigger: GGAGATCAATTGACAGCTGCAGATCTGGTTCCAATT...GGTGACAGATAATAGTAGAAATTGGCGGTTTCGAGCTGAACTGGCTGAACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAACCACTTGGGACATCTaGCAAAGTTCTCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSTTWDI*QSSPQA
Trigger: AGCTTGTGGAGAACTTTGGCAGATGTCCCAAGTGGT...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCGGCAGGGTGGATGCTTaGAAAATACTTGACATCGCT +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVGRVDA*KILDIA
Trigger: AGCGATGTCAAGTATTTTGCAAGCATCCACCCTGCC...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCCCTCCTTTCCCATTTaGACACGTCACAAACGATTC +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVPSFPI*TRHKRF
Trigger: GAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGG...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGGACAGGGCACACTTTaGTCTCCACATCAAATCGTT +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLGQGTL*SPHQIV
Trigger: AACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCATTTGCTAAGGTTTATCCTTCCCAACCATaGGAGCCATTTTGCACATTA +
Preference number: 4 (lower is better)
Translates to: NVFASSTRTLGTLSFAKVYPSQP*EPFCTL
Trigger: TAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATA...AACCTTAGCAAATGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCAAATATCTCCAAAATTaGCAGCACAGACCTTTCGAA +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVKYLQN*QHRPFE
Trigger: TTCGAAAGGTCTGTGCTGCCAATTTTGGAGATATTT...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp GCCTCAGCAGCATGGTCTTCCATCGTGTTTTCCAGTATGACACTGGAATTACTATCTTCAGTAGCTTGCTaGCCAACTACACTGCAAATA +
Preference number: 4 (lower is better)
Translates to: ASAAWSSIVFSSMTLELLSSVAC*PTTLQI
Trigger: TATTTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGA...TAGTAATTCCAGTGTCATACTGGAAAACACGATGGAAGACCATGCTGCTGAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGACTTGTACATCCTCTaGGGCTTCTTGATCTCTGGT +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLDLYIL*GFLISG
Trigger: ACCAGAGATCAAGAAGCCCCAGAGGATGTACAAGTC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCGGAGTCCTCCAGAAATaGAAGGAGTTATACAATTCC +
Preference number: 4 (lower is better)
Translates to: YSHSFCFHIIIAIWGCQLGVLQK*KELYNS
Trigger: GGAATTGTATAACTCCTTCCATTTCTGGAGGACTCC...GAGCTGACAGCCCCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AGCTGTTCAGCCAGTTCAGCTCGAAACCGCCAATTTCTACTATTATCTGTCACCTTGTGCTTTAACATCTaGATCATCAATGTGGGGCTC +
Preference number: 4 (lower is better)
Translates to: SCSASSARNRQFLLLSVTLCFNI*IINVGL
Trigger: GAGCCCCACATTGATGATCCAGATGTTAAAGCACAA...GGTGACAGATAATAGTAGAAATTGGCGGTTTCGAGCTGAACTGGCTGAACAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AGAGTTTGTCTTAATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCAATAACTGCAAGCTCGTaGATGGAGAATGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: RVCLNVFASSTRTLGTLSITASS*MENARV
Trigger: AACTCTAGCATTCTCCATCCACGAGCTTGCAGTTAT...TGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp CAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATCAGCAAACTGGTCCATaGGAAGGCAGTCATCCTCAA +
Preference number: 4 (lower is better)
Translates to: QKKLCLHTDSEQWDVNSHQQTGP*EGSHPQ
Trigger: TTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTG...ATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCGAATATAGTGAAGAGTaGAGTCCATATTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVEYSEE*SPYSQQ
Trigger: CTGTTGAGAATATGGACTCCACTCTTCACTATATTC...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
3UTR CAA 72 bp CGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTaGCACATTATAGCCACAGCTTCTGTTTTCACATCA +
Preference number: 4 (lower is better)
Translates to: RSVISFPTMGAI*HIIATASVFTS
Trigger: TGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTTTGACATGTTGCACATaGAACCGCCATGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLLTCCT*NRHEAF
Trigger: GAATGCTTCATGGCGGTTTCATGTGCAACATGTCAA...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTTTGGCGAACCCAACGTaGAGGATCACTGATCAAATT +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLLANPT*RITDQI
Trigger: AATTTGATCAGTGATCCTTCACGTTGGGTTCGCCAA...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTCTTTCTCTTGACTCTTaGAATCCCTGGTATTGGGTG +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLLSLDS*NPWYWV
Trigger: CACCCAATACCAGGGATTTCAAGAGTCAAGAGAAAG...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCAAAACATTCTTGACAAAACAGTaGGATGTGAGGCACCTGTTC +
Preference number: 4 (lower is better)
Translates to: ALTVGSESSANLLILSKTFLTKQ*DVRHLF
Trigger: GAACAGGTGCCTCACATCGCACTGTTTTGTCAAGAA...TGTTTTGGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR GCA 90 bp AAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAGCTGCCTGACTTGTCTGATTATTCTGATCTaGAAGGTATCTAACCACAAT +
Preference number: 4 (lower is better)
Translates to: KSFNELLLQQSQQSCLTCLIILI*KVSNHN
Trigger: ATTGTGGTTAGATACCTTGCAGATCAGAATAATCAG...ACAAGTCAGGCAGCTTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000578875.5
ENST00000580182.5
CDS-3UTR GCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCGAACGTGAAACATTCTaGAATCGCAGCACATCTCAC +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVERETF*NRSTSH
Trigger: GTGAGATGTGCTGCGATTGCAGAATGTTTCACGTTC...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp AACATGGCCTCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTGCTGCAGAAATCCATTAAAAATTaGAACCAGATCTGCAGCTGT +
Preference number: 4 (lower is better)
Translates to: NMASSPDLLLRILCCLLQKSIKN*NQICSC
Trigger: ACAGCTGCAGATCTGGTTCCAATTTTTAATGGATTT...CTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCATGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp CTGAGGTACAACATCTTGTACTTTAGTTCTCCTTTCCTCATCAGGGCTAAAACTCAACATTTCATCTTGTaGGACAAAGTCCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: LRYNILYFSSPFLIRAKTQHFIL*DKVQGS
Trigger: GGATCCCTGGACTTTGTCTCACAAGATGAAATGTTG...AGTTTTAGCCCTGATGAGGAAAGGAGAACTAAAGTACAAGATGTTGTACCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp AATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTAAAAGCATATGGTATTaGAGGCCGGTTTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: NILPNHGSHFAHYSHSFCKSIWY*RPVFLT
Trigger: TGTCAAGAAAACCGGCCTTCAATACCATATGCTTTT...ACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp CATTTTGCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTGGCATCAAATCGTTCAATaGGCTCCTGCTCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: HFAHYSHSFCFHIIIAIWHQIVQ*APAPTE
Trigger: CTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATG...CCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR TCA 90 bp GCCTCAGCAGCATGGTCTTCCATCGTGTTTTCCAGTATGACACTGGAATTACTAGAGTTATACAATTCCTaGTCTAAGAGAGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: ASAAWSSIVFSSMTLELLELYNS*SKRAES
Trigger: AGATTCAGCTCTCTTAGATCAGGAATTGTATAACTC...TAGTAATTCCAGTGTCATACTGGAAAACACGATGGAAGACCATGCTGCTGAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp CATTTTGCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTGGAATCACATCAGACTCTaGGCTGTAGTCATCCACACC +
Preference number: 4 (lower is better)
Translates to: HFAHYSHSFCFHIIIAIWNHIRL*AVVIHT
Trigger: GGTGTGGATGACTACAGCTCAGAGTCTGATGTGATT...CCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578875.5
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGACAAAGTCCAGGGCTaGAGGTATAATAATCACATC +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLDKVQG*RYNNHI
Trigger: GATGTGATTATTATACCTTCAGCCCTGGACTTTGTC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400556.8
CDS-3UTR TCA 90 bp CACCATTTGTCTGTTAAATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCTTCATCCTTCAGGAGTaGGAAGTTTTTGCTCCAGTC +
Preference number: 4 (lower is better)
Translates to: HHLSVKYVLTCSILVQSPFILQE*EVFAPV
Trigger: GACTGGAGCAAAAACTTCTCACTCCTGAAGGATGAA...GGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGACAAATGGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR GCA 90 bp AACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTTTTCACATCATCGCTGGCCAACTACACTaGAAATATCTCCAAAATTGG +
Preference number: 4 (lower is better)
Translates to: NHGSHFAHYSHSFCFHIIAGQLH*KYLQNW
Trigger: CCAATTTTGGAGATATTTGCAGTGTAGTTGGCCAGC...GATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp AACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTTCTTCAGTAGCTTaGTGGCCAACTACACTGCAA +
Preference number: 4 (lower is better)
Translates to: NHGSHFAHYSHSFCFHIIISSVA*WPTTLQ
Trigger: TTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAAT...GATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTATCTCCAAGAATAACTaGAAGCTCGTGGATGGAGAA +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLISKNN*KLVDGE
Trigger: TTCTCCATCCACGAGCTTGCAGTTATTCTTGGAGAT...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCAATTGGAACCAGATCTaGAGCTGTCAATTGATCTCC +
Preference number: 4 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVNWNQI*SCQLIS
Trigger: GGAGATCAATTGACAGCTGCAGATCTGGTTCCAATT...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCATATCCTTCCCAACCATaGGAGCCATTTTGCACATTA +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSYPSQP*EPFCTL
Trigger: TAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATA...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp ACGCTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAAATATCTCCAAAATTaGCAGCACAGACCTTTCGAA +
Preference number: 4 (lower is better)
Translates to: TLCNILPNHGSHFAHYSHKYLQN*QHRPFE
Trigger: TTCGAAAGGTCTGTGCTGCCAATTTTGGAGATATTT...GTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAGCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
3UTR CAA 72 bp ATTTGTCTGTTAAATATGTTCTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGCGTCAACATTTCATCT +
Preference number: 4 (lower is better)
Translates to: ICLLNMFSLAAY*SNLPRGVNISS
Trigger: AGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGACAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTAAAAGCATATGGTATTaGAGGCCGGTTTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLKSIWY*RPVFLT
Trigger: TGTCAAGAAAACCGGCCTTCAATACCATATGCTTTT...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp AATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTTTTAAAATACTGGCCTaGGCTAGATGGATTAGCAAA +
Preference number: 4 (lower is better)
Translates to: NILPNHGSHFAHYSHSFCFKILA*ARWISK
Trigger: TTTGCTAATCCATCTAGCTCAGGCCAGTATTTTAAA...ACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAATTGTTGCTCAAGTCTaGATCGCTGTGAATATAGTG +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSIVAQV*IAVNIV
Trigger: CACTATATTCACAGCGATTCAGACTTGAGCAACAAT...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR TCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCATACTGTACTTTCTCTTaGCTCTTGAAATCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSYCTFS*LLKSLV
Trigger: TACCAGGGATTTCAAGAGTCAAGAGAAAGTACAGTA...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp AGAGTTTGTCTTAATGTCTTTGCAAGCAGCACTCGCACGTTAGGAACCCTGTCAAAATATGTTCTCACTTaGAGCATACTTGTCCAATCT +
Preference number: 4 (lower is better)
Translates to: RVCLNVFASSTRTLGTLSKYVLT*SILVQS
Trigger: AGATTGGACAAGTATGCTGCAAGTGAGAACATATTT...TGACAGGGTTCCTAACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR TCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTTTCTCTTTTCTATACTaGTGGTCTCTTCATGTGCAT +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLFSFLY*WSLHVH
Trigger: ATGCACATGAAGAGACCATCAGTATAGAAAAGAGAA...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTAGAAGAAACTTTGTCTaGACACAGATTCAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLRRNFV*TQIQSN
Trigger: ATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCT...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAGGGCTTCTTGATCTCTaGTCCTATTTTTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSGLLDL*SYFCFL
Trigger: TAGAAAACAAAAATAGGACCAGAGATCAAGAAGCCC...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAGAATATAGTGAAGAGTaGAGTCCATATTCTCAACAG +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSEYSEE*SPYSQQ
Trigger: CTGTTGAGAATATGGACTCCACTCTTCACTATATTC...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR GCA 90 bp GCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCAAAACACTGATTATTCTGATCTaGAAGGTATCTAACCACAAT +
Preference number: 4 (lower is better)
Translates to: ALTVGSESSANLLILSKTLIILI*KVSNHN
Trigger: ATTGTGGTTAGATACCTTGCAGATCAGAATAATCAG...TGTTTTGGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR CCA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCATCTTCTTTAAAATACTaGCCTGAGCTAGATGGATTA +
Preference number: 4 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSSSLKY*PELDGL
Trigger: TAATCCATCTAGCTCAGGCCAGTATTTTAAAGAAGA...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CCA 90 bp TTTGCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTGGGGCACAGATTCAGAGCAATaGGACGTAAATAGTCATAAA +
Preference number: 4 (lower is better)
Translates to: FAHYSHSFCFHIIIAIWGTDSEQ*DVNSHK
Trigger: TTTATGACTATTTACGTCCCATTGCTCTGAATCTGT...GCCCCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp GACTATATAACTCTAGAAGTAAAATCAGCTGTTCAGCCAGTTCAGCTCGAAACCCTGATTATTCTGATCTaGAAGGTATCTAACCACAAT +
Preference number: 4 (lower is better)
Translates to: DYITLEVKSAVQPVQLETLIILI*KVSNHN
Trigger: ATTGTGGTTAGATACCTTGCAGATCAGAATAATCAG...GGTTTCGAGCTGAACTGGCTGAACAGCTGATTTTACTTCTAGAGTTATATAGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR GCA 90 bp AAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATAAACATAGAAGAAACTTTGTCTaGACACAGATTCAGAGCAAT +
Preference number: 4 (lower is better)
Translates to: KLCLHTDSEQWDVNSHKHRRNFV*TQIQSN
Trigger: ATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCT...ATGTTTATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CCA 90 bp AAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATAAACATTCTTCTTTAAAATACTaGCCTGAGCTAGATGGATTA +
Preference number: 4 (lower is better)
Translates to: KLCLHTDSEQWDVNSHKHSSLKY*PELDGL
Trigger: TAATCCATCTAGCTCAGGCCAGTATTTTAAAGAAGA...ATGTTTATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS CCA 90 bp ATTCGGGGGCGCCGGGAGAAGAGAGCGAAGGGCGGAAAGCGAACTTaGGCGTTACTCCGGGCGTCTCCCTCCCCCAGCGGAACCTGGGCG +
Preference number: 5 (lower is better)
Translates to: IRGRREKRAKGGKRT*ALLRASPSPSGTWA
Trigger: CGCCCAGGTTCCGCTGGGGGAGGGAGACGCCCGGAGTAACGCCCAAGTTCGCTTTCCGCCCTTCGCTCTCTTCTCCCGGCGCCCCCGAAT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577393.1
CDS-3UTR CAA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAGAGAGGTCCGCCATCTaGTGGTCGCCCCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEERSAI*WSPPPP
Trigger: CGGAGGAGGGGGCGACCACAAGATGGCGGACCTCTC...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS CCA 90 bp CAGTCAGCTGCCCAGGGCCAGATGGTGGCTGGCAGGAGCATGGGGTaGCTCAAACAAAGCCAGATGTGCCCGACACAGGGAGCTCACATT +
Preference number: 5 (lower is better)
Translates to: QSAAQGQMVAGRSMG*LKQSQMCPTQGAHI
Trigger: AATGTGAGCTCCCTGTGTCGGGCACATCTGGCTTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 90 bp AATTGCAGTCAGCTGCCCAGGGCCAGATGGTGGCTGGCAGGAGCATaGGGTGGCTCAAACAAAGCCAGATGTGCCCGACACAGGGAGCTC +
Preference number: 5 (lower is better)
Translates to: NCSQLPRARWWLAGA*GGSNKARCARHREL
Trigger: GAGCTCCCTGTGTCGGGCACATCTGGCTTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTGACTGCAATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS-3UTR CAA 90 bp TTGATGAGGTCCACTCCGAACGTTGGTGGTGTTGCCGCGTGCAGCTTCTTCACCGGTCCACTCCGAACGTaGGTGGTGTTGCCGCGTGCA +
Preference number: 5 (lower is better)
Translates to: LMRSTPNVGGVAACSFFTGPLRT*VVLPRA
Trigger: TGCACGCGGCAACACCACCAACGTTCGGAGTGGACC...GGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAGGTCCACTCCGAACGTaGGTGGTGTTGCCGCGTGCA +
Preference number: 5 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEGPLRT*VVLPRA
Trigger: TGCACGCGGCAACACCACCAACGTTCGGAGTGGACC...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS CCA 90 bp GGAGAAATCAGCTCGAATTGCAGTCAGCTGCCCAGGGCCAGATGGTaGCTGGCAGGAGCATGGGGTGGCTCAAACAAAGCCAGATGTGCC +
Preference number: 5 (lower is better)
Translates to: GEISSNCSQLPRARW*LAGAWGGSNKARCA
Trigger: GGCACATCTGGCTTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTGACTGCAATTCGAGCTGATTTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 90 bp GGAGGGAGTCCACTGTGTACCTGTCGAGGCTCTGAGGAGCCTTCCTaGAAGGGATTTGCTAGGGATAACAGAGGGAGGGTGTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: GGSPLCTCRGSEEPS*KGFARDNRGRVSSS
Trigger: GCTGGAGGACACCCTCCCTCTGTTATCCCTAGCAAATCCCTTCCAGGAAGGCTCCTCAGAGCCTCGACAGGTACACAGTGGACTCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 90 bp CAGGGAGAAATCAGCTCGAATTGCAGTCAGCTGCCCAGGGCCAGATaGTGGCTGGCAGGAGCATGGGGTGGCTCAAACAAAGCCAGATGT +
Preference number: 5 (lower is better)
Translates to: QGEISSNCSQLPRAR*WLAGAWGGSNKARC
Trigger: ACATCTGGCTTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTGACTGCAATTCGAGCTGATTTCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS-3UTR CAA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAACGAACGTTGGTGGTGTaGCCGCGTGCAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQERTLVV*PRAASS
Trigger: TGAAGAAGCTGCACGCGGCAACACCACCAACGTTCG...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTGGTCCACTCCGAACGTaGGTGGTGTTGCCGCGTGCA +
Preference number: 5 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAGPLRT*VVLPRA
Trigger: TGCACGCGGCAACACCACCAACGTTCGGAGTGGACC...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS GCA 90 bp GGTAAGCCCAGGGCCTCGCTTACCTGGCAGACAAAGACAAAGGCTTaGCGACCAGACCACTTGGGACATCTGCCAAAGTTCTCCACAAGC +
Preference number: 5 (lower is better)
Translates to: GKPRASLTWQTKTKA*RPDHLGHLPKFSTS
Trigger: GCTTGTGGAGAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGGTAAGCGAGGCCCTGGGCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578010.1
CDS GCA 90 bp ATGGTGGCTGGCAGGAGCATGGGGTGGCTCAAACAAAGCCAGATGTaGCCGACACAGGGAGCTCACATTCCCAGACAACCTTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: MVAGRSMGWLKQSQM*PTQGAHIPRQPSDF
Trigger: GAAGTCAGAAGGTTGTCTGGGAATGTGAGCTCCCTGTGTCGGGCACATCTGGCTTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS-3UTR CAA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAATCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQESLAAY*SNLPRG
Trigger: GCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGA...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGAGGACAGGGCACACTTaGGTCTCCACATCAAATCGT +
Preference number: 5 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVARTGHT*VSTSNR
Trigger: ACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCT...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAGACAAAGACAAAGGCTaGCCGACCAGACCACTTGGG +
Preference number: 5 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEDKDKG*PTRPLG
Trigger: CCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTC...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAGCTCCGCTCTCACAGTaGGTTCTGAATCATCGGCCA +
Preference number: 5 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEAPLSQ*VLNHRP
Trigger: TGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGC...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS CCA 90 bp GCCAAAGTTCTCCACAAGCTCATTGATGAGGTCCACTCCGAACGTTaGTGGTGTTGCCGCGTGCAGCTTCTTCACCATCTCGCTGACCTG +
Preference number: 5 (lower is better)
Translates to: AKVLHKLIDEVHSER*WCCRVQLLHHLADL
Trigger: CAGGTCAGCGAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578329.1
CDS-3UTR CAA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGCATTTCTTCAGTAGCTaGCTGGCCAACTACACTGCA +
Preference number: 5 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAHFFSS*LANYTA
Trigger: TGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAATG...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGGGACAGCACTTCCACTaGTGCTTTAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAGQHFH*CFNIWI
Trigger: GATCCAGATGTTAAAGCACAAGTGGAAGTGCTGTCC...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp CTCATTGATGAGGTCCACTCCGAACGTTGGTGGTGTTGCCGCGTGCAGCTTCTTTGCCGACCAGACCACTaGGGACATCTGCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: LIDEVHSERWWCCRVQLLCRPDH*GHLPKF
Trigger: GAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCA...AAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp CTCTGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCGAGAGGTCCGCCATCTaGTGGTCGCCCCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: LCNILPNHGSHFAHYSHSERSAI*WSPPPP
Trigger: CGGAGGAGGGGGCGACCACAAGATGGCGGACCTCTC...GCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578875.5
CDS-3UTR CAA 90 bp CATATGGTATTGAAGGCCGGTTTTCTTGACAAAACAGTGCGATGTGAGGCACCTGAGAGGTCCGCCATCTaGTGGTCGCCCCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: HMVLKAGFLDKTVRCEAPERSAI*WSPPPP
Trigger: CGGAGGAGGGGGCGACCACAAGATGGCGGACCTCTC...AGGTGCCTCACATCGCACTGTTTTGTCAAGAAAACCGGCCTTCAATACCATATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR CAA 90 bp AATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCCAGGGGCGTCAACATTGAGAGGTCCGCCATCTaGTGGTCGCCCCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: NMFSLAAYLSNLPRGVNIERSAI*WSPPPP
Trigger: CGGAGGAGGGGGCGACCACAAGATGGCGGACCTCTC...AATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR CAA 90 bp GCACCTGTTCCATCAGCTCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCACTCCGGGCCACCATTaGTCTTGGCCTCCCAAAGTG +
Preference number: 5 (lower is better)
Translates to: APVPSAPLSQLVLNHRPITPGHH*SWPPKV
Trigger: CACTTTGGGAGGCCAAGACAAATGGTGGCCCGGAGT...GATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGCTGATGGAACAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS GCA 90 bp AGGAGAACTAATGCTCCTTATTCCAGGAGGAGCTGTAGGAAGTCCTaGCCGAGACCAAGCACAGATAGGAGGTCCCACCCATTACGCAGG +
Preference number: 5 (lower is better)
Translates to: RRTNAPYSRRSCRKS*PRPSTDRRSHPLRR
Trigger: CCTGCGTAATGGGTGGGACCTCCTATCTGTGCTTGGTCTCGGGCAGGACTTCCTACAGCTCCTCCTGGAATAAGGAGCATTAGTTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 90 bp AAAGTTCTCCACAAGCTCATTGATGAGGTCCACTCCGAACGTTGGTaGTGTTGCCGCGTGCAGCTTCTTCACCATCTCGCTGACCTGGGA +
Preference number: 5 (lower is better)
Translates to: KVLHKLIDEVHSERW*CCRVQLLHHLADLG
Trigger: TCCCAGGTCAGCGAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAACTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578329.1
CDS-3UTR CAA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGSLAAY*SNLPRG
Trigger: GCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGA...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGGGGCTAAAACTGCTATaGTTGCTCAAGTCTGAATCG +
Preference number: 5 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVAGLKLL*LLKSES
Trigger: CGATTCAGACTTGAGCAACAATAGCAGTTTTAGCCC...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAATTCTCCACAAGCTCATaGATGAGGTCCACTCCGAAC +
Preference number: 5 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQEFSTSS*MRSTPN
Trigger: GTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAA...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGTGCCGACCAGACCACTaGGGACATCTGCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGECRPDH*GHLPKF
Trigger: GAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCA...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGACAAAGACAAAGGCTaGCCGACCAGACCACTTGGG +
Preference number: 5 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEDKDKG*PTRPLG
Trigger: CCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTC...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCGCTCCGCTCTCACAGTaGGTTCTGAATCATCGGCCA +
Preference number: 5 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSAPLSQ*VLNHRP
Trigger: TGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGC...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGAGAGGAAGGTCTCTCCTCCCCCGAAAGCTATCCCAGGTCACATGCGTGGCGTCAATCCTACTTGTGTaGGCATCAGGTCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: RRGRSLLPRKLSQVTCVASILLV*ASGPLG
Trigger: TCCTAAAGGACCTGATGCCAACACAAGTAGGATTGA...CGCCACGCATGTGACCTGGGATAGCTTTCGGGGGAGGAGAGACCTTCCTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGTTTTCACATCATCATaGCTATCTGGGGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKVFTSS*LSGAVS
Trigger: GCTGACAGCCCCAGATAGCAATGATGATGTGAAAAC...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAACCATGGGAGCCATTTaGCACATTATAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKTMGAI*HIIATA
Trigger: AGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGT...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCCGAACGTTGGTGGTGTaGCCGCGTGCAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVRTLVV*PRAASS
Trigger: TGAAGAAGCTGCACGCGGCAACACCACCAACGTTCG...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCGACAAAGACAAAGGCTaGCCGACCAGACCACTTGGG +
Preference number: 5 (lower is better)
Translates to: RTGHTLVSTSNRSMSSCSDKDKG*PTRPLG
Trigger: CCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTC...GGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGCATCTTCGGAGATTTaGGTACTGGCAGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEASSEI*VLAGWM
Trigger: CATCCACCCTGCCAGTACCAAAATCTCCGAAGATGC...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAAAGCCTTCTAGTAGGTaGAGGACGCTGTGCTCATGG +
Preference number: 5 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEKPSSR*RTLCSW
Trigger: CCATGAGCACAGCGTCCTCAACCTACTAGAAGGCTT...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGAAGCCTTCTAGTAGGTaGAGGACGCTGTGCTCATGG +
Preference number: 5 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGEKPSSR*RTLCSW
Trigger: CCATGAGCACAGCGTCCTCAACCTACTAGAAGGCTT...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGAGAGGTCCGCCATCTaGTGGTCGCCCCCTCCTCCG +
Preference number: 5 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLERSAI*WSPPPP
Trigger: CGGAGGAGGGGGCGACCACAAGATGGCGGACCTCTC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAATTGAAATCCCTGGTATaGGGTGTAGGCAACTTGCAC +
Preference number: 5 (lower is better)
Translates to: RSHAWRMPTEPRLSWKQELKSLV*GVGNLH
Trigger: GTGCAAGTTGCCTACACCCAATACCAGGGATTTCAA...TTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCTCAATCCTACTTGTGTaGGCATCAGGTCCTTTAGGA +
Preference number: 5 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPSILLV*ASGPLG
Trigger: TCCTAAAGGACCTGATGCCAACACAAGTAGGATTGA...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS TCA 90 bp GGGAGGGTGTCCTCCAGCAACCTTCCCATCACATCTGAGGGGCCCTaGGACTTTCATGACATCTACCAAGCTAACCTGAAAGCTTCAATG +
Preference number: 5 (lower is better)
Translates to: GRVSSSNLPITSEGP*DFHDIYQANLKASM
Trigger: CATTGAAGCTTTCAGGTTAGCTTGGTAGATGTCATGAAAGTCTCAGGGCCCCTCAGATGTGATGGGAAGGTTGCTGGAGGACACCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS-3UTR CAA 90 bp CACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: HFGLHIKSFNELLLQQSQSLAAY*SNLPRG
Trigger: GCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGA...CTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp TGTTCCATCAGCTCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTATCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: CSISSALTVGSESSANLLSLAAY*SNLPRG
Trigger: GCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGA...TAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGCTGATGGAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR CAA 90 bp GACATCGCTGTCACGGTCCATCTGAAGAGCCATGATGGTCTGCTCCACAGCCTCGGGCTAAAACTGCTATaGTTGCTCAAGTCTGAATCG +
Preference number: 5 (lower is better)
Translates to: DIAVTVHLKSHDGLLHSLGLKLL*LLKSES
Trigger: CGATTCAGACTTGAGCAACAATAGCAGTTTTAGCCC...GAGGCTGTGGAGCAGACCATCATGGCTCTTCAGATGGACCGTGACAGCGATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp AGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCTCTCCTCCCCCCGAACAGAAGAAACTTaGTCTGCACACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: RQLAPAMKSAGEEGLSSPRTEET*SAHRFR
Trigger: TCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCG...GGGGGAGGAGAGACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp CTTCCTCTGGTCCCTCTGGGCTGGGTTTTCCCCCAGAGTTCTGTTCAAGCTCTAATGCTTGCAAAATACTaGACATCGCTGTCACGGTCC +
Preference number: 5 (lower is better)
Translates to: LPLVPLGWVFPQSSVQALMLAKY*TSLSRS
Trigger: GGACCGTGACAGCGATGTCAAGTATTTTGCAAGCAT...TAGAGCTTGAACAGAACTCTGGGGGAAAACCCAGCCCAGAGGGACCAGAGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp ATGCACAGCAAACTGGTCCATGGGAAGGCAGTCATCCTCAATGACAGTCTGGCAGCATCTTCGGAGATTTaGGTACTGGCAGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: MHSKLVHGKAVILNDSLAASSEI*VLAGWM
Trigger: CATCCACCCTGCCAGTACCAAAATCTCCGAAGATGC...TGCCAGACTGTCATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAACCATGGGAGCCATTTaGCACATTATAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEETMGAI*HIIATA
Trigger: AGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGT...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTCATTTCTTCAGTAGCTaGCTGGCCAACTACACTGCA +
Preference number: 5 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAHFFSS*LANYTA
Trigger: TGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAATG...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTGGACAGCACTTCCACTaGTGCTTTAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAGQHFH*CFNIWI
Trigger: GATCCAGATGTTAAAGCACAAGTGGAAGTGCTGTCC...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAACTAAAACTGCTATTGTaGCTCAAGTCTGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKLKLLL*LKSESL
Trigger: CAGCGATTCAGACTTGAGCAACAATAGCAGTTTTAG...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAATCTGCAGCTGTCAATaGATCTCCAAGAATAACTGC +
Preference number: 5 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKICSCQ*ISKNNC
Trigger: GCAGTTATTCTTGGAGATCAATTGACAGCTGCAGAT...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTATGCTTGCAAAATACTaGACATCGCTGTCACGGTCC +
Preference number: 5 (lower is better)
Translates to: RADTEGLFHIWAHVCLQAMLAKY*TSLSRS
Trigger: GGACCGTGACAGCGATGTCAAGTATTTTGCAAGCAT...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAGCTGCCTGACTTGTAAGCCTTCTAGTAGGTaGAGGACGCTGTGCTCATGG +
Preference number: 5 (lower is better)
Translates to: KSFNELLLQQSQQSCLTCKPSSR*RTLCSW
Trigger: CCATGAGCACAGCGTCCTCAACCTACTAGAAGGCTT...ACAAGTCAGGCAGCTTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp AGCTCCGCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCGCTCCGCTCTCACAGTaGGTTCTGAATCATCGGCCA +
Preference number: 5 (lower is better)
Translates to: SSALTVGSESSANLLILSAPLSQ*VLNHRP
Trigger: TGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGC...GGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000580182.5
ENST00000583092.1
CDS-3UTR CAA 90 bp ATCCCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGTTGAAATCCCTGGTATaGGGTGTAGGCAACTTGCAC +
Preference number: 5 (lower is better)
Translates to: IPGIGCRQLAPAMKSAGELKSLV*GVGNLH
Trigger: GTGCAAGTTGCCTACACCCAATACCAGGGATTTCAA...CTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS CCA 90 bp CCATGGGGACTGAGACAGAGCAAAGCACTTCCTAGTATGTTCAACTaGAACATGGCCCACACTGATCCATGGTCACAGTTTGGAATGTGC +
Preference number: 5 (lower is better)
Translates to: PWGLRQSKALPSMFN*NMAHTDPWSQFGMC
Trigger: GCACATTCCAAACTGTGACCATGGATCAGTGTGGGCCATGTTCCAGTTGAACATACTAGGAAGTGCTTTGCTCTGTCTCAGTCCCCATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS-3UTR CAA 90 bp GGTCACATGCGTGGCGAATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAAAAAAGCATATGGTATaGAAGGCCGGTTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: GHMRGECPLNLGSHGSRKKKHMV*KAGFLD
Trigger: GTCAAGAAAACCGGCCTTCAATACCATATGCTTTTT...TTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCATTCGCCACGCATGTGACC
50% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp TTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACTAGGACAGGGCACACTTaGGTCTCCACATCAAATCGT +
Preference number: 5 (lower is better)
Translates to: FTSSLLSGAVSSMRTGHTRTGHT*VSTSNR
Trigger: ACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCT...AGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp ATGCACAGCAAACTGGTCCATGGGAAGGCAGTCATCCTCAATGACAGTCTGGCAGTTTTCACATCATCATaGCTATCTGGGGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: MHSKLVHGKAVILNDSLAVFTSS*LSGAVS
Trigger: GCTGACAGCCCCAGATAGCAATGATGATGTGAAAAC...TGCCAGACTGTCATTGAGGATGACTGCCTTCCCATGGACCAGTTTGCTGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp AGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCACCATGGGAGCCATTTaGCACATTATAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: RTGHTLVSTSNRSMSSCSTMGAI*HIIATA
Trigger: AGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGT...GGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTTCTCCACAAGCTCATaGATGAGGTCCACTCCGAAC +
Preference number: 5 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVFSTSS*MRSTPN
Trigger: GTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAA...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS CCA 90 bp TTGACTTACAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTaGGGCTGTCAGCTCTATGAGGACAGGGCACACTTTGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LTYSHSFCFHIIIAI*GCQLYEDRAHFGLH
Trigger: GTGGAGACCAAAGTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTGTAAGTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578178.5
CDS-3UTR CAA 90 bp TTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACGTTTTCACATCATCATaGCTATCTGGGGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: FHIIIAIWGCQLYEDRAHVFTSS*LSGAVS
Trigger: GCTGACAGCCCCAGATAGCAATGATGATGTGAAAAC...GTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp AACATGGCCTCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTGCTGCAGACCATGGGAGCCATTTaGCACATTATAGCCACAGCT +
Preference number: 5 (lower is better)
Translates to: NMASSPDLLLRILCCLLQTMGAI*HIIATA
Trigger: AGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGT...CTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCCAAATATCTCCAAAATaGGCAGCACAGACCTTTCGA +
Preference number: 5 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSQISPK*AAQTFR
Trigger: TCGAAAGGTCTGTGCTGCCAATTTTGGAGATATTTG...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAAGCTGCCTGACTTGTCATTTCTTCAGTAGCTaGCTGGCCAACTACACTGCA +
Preference number: 5 (lower is better)
Translates to: KSFNELLLQQSQQSCLTCHFFSS*LANYTA
Trigger: TGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAATG...ACAAGTCAGGCAGCTTTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp ATGCCCACTGAACCTCGGCTCTCATGGAAGCAGGAAAGACACCGAGATTCAAGCCTAAAACTGCTATTGTaGCTCAAGTCTGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: MPTEPRLSWKQERHRDSSLKLLL*LKSESL
Trigger: CAGCGATTCAGACTTGAGCAACAATAGCAGTTTTAG...GCTTGAATCTCGGTGTCTTTCCTGCTTCCATGAGAGCCGAGGTTCAGTGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp CCTGGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAATCTGCAGCTGTCAATaGATCTCCAAGAATAACTGC +
Preference number: 5 (lower is better)
Translates to: PGIGCRQLAPAMKSAGEEICSCQ*ISKNNC
Trigger: GCAGTTATTCTTGGAGATCAATTGACAGCTGCAGAT...TTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp GGTATTGGGTGTAGGCAACTTGCACCTGCAATGAAGTCCGCAGGAGAGGAAGGTCGAACAGAAGAAACTTaGTCTGCACACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: GIGCRQLAPAMKSAGEEGRTEET*SAHRFR
Trigger: TCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCG...ACCTTCCTCTCCTGCGGACTTCATTGCAGGTGCAAGTTGCCTACACCCAATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS GCA 90 bp TGGCCTCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTGCTaGAGTGAAATGGTCCGATCAGAAACAAAGCACCTCTCCAAAAAG +
Preference number: 5 (lower is better)
Translates to: WPQVPIFCSEYCVAC*SEMVRSETKHLSKK
Trigger: CTTTTTGGAGAGGTGCTTTGTTTCTGATCGGACCATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583438.1
CDS GCA 90 bp ACATGGCCTCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTaGTGCAGTGAAATGGTCCGATCAGAAACAAAGCACCTCTCCAAA +
Preference number: 5 (lower is better)
Translates to: TWPQVPIFCSEYCVA*CSEMVRSETKHLSK
Trigger: TTTGGAGAGGTGCTTTGTTTCTGATCGGACCATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583438.1
CDS-3UTR CAA 90 bp CTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTTTTCACAGGACAGGGCACACTTaGGTCTCCACATCAAATCGT +
Preference number: 5 (lower is better)
Translates to: LPNHGSHFAHYSHSFCFHRTGHT*VSTSNR
Trigger: ACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCT...GTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp TTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCAACAGAGCCAGCAAGCTCAGAATACTGTGTaGCTTGCTGCAGTGAAATGG +
Preference number: 5 (lower is better)
Translates to: FGLHIKSFNELLLQQSQQAQNTV*LAAVKW
Trigger: CCATTTCACTGCAGCAAGCAACACAGTATTCTGAGC...TTGCTGGCTCTGTTGGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp AGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTGCCTTCAGGCTCTGAGGTACAACATCTaGTACTTTAGTTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: RADTEGLFHIWAHVCLQALRYNI*YFSSPF
Trigger: GAAAGGAGAACTAAAGTACAAGATGTTGTACCTCAG...AGCCTGAAGGCAGACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp AGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCCATCTGCAGCTGTCAATaGATCTCCAAGAATAACTGC +
Preference number: 5 (lower is better)
Translates to: RTGHTLVSTSNRSMSSCSICSCQ*ISKNNC
Trigger: GCAGTTATTCTTGGAGATCAATTGACAGCTGCAGAT...GGAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp CAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATCGAACGTTGGTGGTGTaGCCGCGTGCAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: QKKLCLHTDSEQWDVNSHRTLVV*PRAASS
Trigger: TGAAGAAGCTGCACGCGGCAACACCACCAACGTTCG...ATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTTGCCGACCAGACCACTaGGGACATCTGCCAAAGTTC +
Preference number: 5 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLCRPDH*GHLPKF
Trigger: GAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCA...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp GAGAGAAGAGTTAGGGCTGATACTGAAGGTCTCTTTCACATCTGGGCACACGTCTTTGTCTTAATGTCTTaGCAAGCAGCACTCGCACGT +
Preference number: 5 (lower is better)
Translates to: ERRVRADTEGLFHIWAHVFVLMS*QAALAR
Trigger: ACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAA...GACGTGTGCCCAGATGTGAAAGAGACCTTCAGTATCAGCCCTAACTCTTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp CTGTTAAATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCCAGGGGCGTCTCTACACTGTGCTTCTaGGGGGCTAAGGAAGAAACT +
Preference number: 5 (lower is better)
Translates to: LLNMFSLAAYLSNLPRGVSTLCF*GAKEET
Trigger: AGTTTCTTCCTTAGCCCCCAAGAAGCACAGTGTAGA...GACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS GCA 90 bp ATGAGTCACTGCACCTGGCCGATATCTGTTAAATATGTTCTCACTTaGAGCATACTTGTCCAATCTCCCCAGGGGCGTCAACATTTCATC +
Preference number: 5 (lower is better)
Translates to: MSHCTWPISVKYVLT*SILVQSPQGRQHFI
Trigger: GATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGATATCGGCCAGGTGCAGTGACTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS GCA 90 bp TGTCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTATATGCACAGTaGTTAGCAATTTCAGTGTCAACCGTTTGTACTTTAGTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: CLPSVKATPGRLYAQ*LAISVSTVCTLVLL
Trigger: AAGGAGAACTAAAGTACAAACGGTTGACACTGAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584754.1
CDS GCA 90 bp CCAATTCTGTCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTATATaGACAGTGCTTAGCAATTTCAGTGTCAACCGTTTGTACTTTAGT +
Preference number: 5 (lower is better)
Translates to: PILSSECQGHTREAI*TVLSNFSVNRLYFS
Trigger: ACTAAAGTACAAACGGTTGACACTGAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGACAGAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584754.1
CDS-3UTR CAA 90 bp GAGGACAGGGCACACTTTGGTCTCCACATCAAATCGTTCAATGAGCTCCTGCTCAAAAAGCATATGGTATaGAAGGCCGGTTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: EDRAHFGLHIKSFNELLLKKHMV*KAGFLD
Trigger: GTCAAGAAAACCGGCCTTCAATACCATATGCTTTTT...GAGCAGGAGCTCATTGAACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTGCATCTTCGGAGATTTaGGTACTGGCAGGGTGGATG +
Preference number: 5 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLASSEI*VLAGWM
Trigger: CATCCACCCTGCCAGTACCAAAATCTCCGAAGATGC...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp CATTTGTCTGTTAAATATGTTCTCACTTGCAGCATACTTGTCCAATCTCCCCAGGCTCCGCTCTCACAGTaGGTTCTGAATCATCGGCCA +
Preference number: 5 (lower is better)
Translates to: HLSVKYVLTCSILVQSPQAPLSQ*VLNHRP
Trigger: TGGCCGATGATTCAGAACCAACTGTGAGAGCGGAGC...CTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583092.1
CDS-3UTR CAA 90 bp CATTTTGCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTGGTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: HFAHYSHSFCFHIIIAIWSLAAY*SNLPRG
Trigger: GCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGA...CCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp CTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCTGTTTTCACGCTCCGCTCTCACAGTaGGTTCTGTTAAATATGTTC +
Preference number: 5 (lower is better)
Translates to: LPNHGSHFAHYSHSFCFHAPLSQ*VLLNMF
Trigger: GAACATATTTAACAGAACCAACTGTGAGAGCGGAGC...GTGAAAACAGAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp TTTCACATCATCATTGCTATCTGGGGCTGTCAGCTCTATGAGGACAGGGCACACAAAAAGCATATGGTATaGAAGGCCGGTTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: FHIIIAIWGCQLYEDRAHKKHMV*KAGFLD
Trigger: GTCAAGAAAACCGGCCTTCAATACCATATGCTTTTT...GTGTGCCCTGTCCTCATAGAGCTGACAGCCCCAGATAGCAATGATGATGTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000285124.12
ENST00000578875.5
CDS-3UTR CAA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTAGGACAGGGCACACTTaGGTCTCCACATCAAATCGT +
Preference number: 5 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLRTGHT*VSTSNR
Trigger: ACGATTTGATGTGGAGACCAAAGTGTGCCCTGTCCT...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp TCGCAGCACATCTCACAAAACCTAGGGAGGATAAGACGCTCTGTAATATCCTTCTTTGTCTTAATGTCTTaGCAAGCAGCACTCGCACGT +
Preference number: 5 (lower is better)
Translates to: SQHISQNLGRIRRSVISFFVLMS*QAALAR
Trigger: ACGTGCGAGTGCTGCTTGCAAAGACATTAAGACAAA...GAAGGATATTACAGAGCGTCTTATCCTCCCTAGGTTTTGTGAGATGTGCTGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCACCCCTCCTTTCCCATTaGCACACGTCACAAACGATT +
Preference number: 5 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSPLLSH*HTSQTI
Trigger: AATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGG...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS TCA 90 bp TCAAGTCCCGATCTTCTGCTCAGAATACTGTGTTGCTTGCTGCAGTaGAATGGTCCGATCAGAAACAAAGCACCTCTCCAAAAAGAAAAG +
Preference number: 5 (lower is better)
Translates to: SSPDLLLRILCCLLQ*NGPIRNKAPLQKEK
Trigger: CTTTTCTTTTTGGAGAGGTGCTTTGTTTCTGATCGGACCATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583438.1
CDS CCA 90 bp TCCTTAGAGTGTAAGGAAAACAAAAGCTGTAGAGTTCTGCATCCATaGGGACTGAGACAGAGCAAAGCACTTCCTAGTATGTTCAACTGG +
Preference number: 5 (lower is better)
Translates to: SLECKENKSCRVLHP*GLRQSKALPSMFNW
Trigger: CCAGTTGAACATACTAGGAAGTGCTTTGCTCTGTCTCAGTCCCCATGGATGCAGAACTCTACAGCTTTTGTTTTCCTTACACTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS-3UTR CAA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCGTTTTCACATCATCATaGCTATCTGGGGCTGTCAGC +
Preference number: 5 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVVFTSS*LSGAVS
Trigger: GCTGACAGCCCCAGATAGCAATGATGATGTGAAAAC...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp TTGCACATTATAGCCACAGCTTCTGTTTTCACATCATCATTGCTATCTGGGGCTGGACAGCACTTCCACTaGTGCTTTAACATCTGGATC +
Preference number: 5 (lower is better)
Translates to: LHIIATASVFTSSLLSGAGQHFH*CFNIWI
Trigger: GATCCAGATGTTAAAGCACAAGTGGAAGTGCTGTCC...AGCCCCAGATAGCAATGATGATGTGAAAACAGAAGCTGTGGCTATAATGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAATGCTTGCAAAATACTaGACATCGCTGTCACGGTCC +
Preference number: 5 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSMLAKY*TSLSRS
Trigger: GGACCGTGACAGCGATGTCAAGTATTTTGCAAGCAT...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp CTGGGTTTTCCCCCAGAGTTCTGTTCAAGCTCTATGTCTAGATCTATTTCAGGACAAATATCTCCAAAATaGGCAGCACAGACCTTTCGA +
Preference number: 5 (lower is better)
Translates to: LGFPPEFCSSSMSRSISGQISPK*AAQTFR
Trigger: TCGAAAGGTCTGTGCTGCCAATTTTGGAGATATTTG...TCCTGAAATAGATCTAGACATAGAGCTTGAACAGAACTCTGGGGGAAAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp CTGGGTTTTCCCCCAGAGTTCTGTTCAAGCTCTATGTCTAGATCTATTTCAGGACGAACAGAAGAAACTTaGTCTGCACACAGATTCAGA +
Preference number: 5 (lower is better)
Translates to: LGFPPEFCSSSMSRSISGRTEET*SAHRFR
Trigger: TCTGAATCTGTGTGCAGACAAAGTTTCTTCTGTTCG...TCCTGAAATAGATCTAGACATAGAGCTTGAACAGAACTCTGGGGGAAAACCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS TCA 90 bp TCTCCTTTCCTCATCAGGGCTAAAACTGCTATTGTTGCTCAAGTCTaGATCGCTGTGAATATAGTGAAGAGTGGAGTCCATATTCTCAAC +
Preference number: 5 (lower is better)
Translates to: SPFLIRAKTAIVAQV*IAVNIVKSGVHILN
Trigger: GTTGAGAATATGGACTCCACTCTTCACTATATTCACAGCGATTCAGACTTGAGCAACAATAGCAGTTTTAGCCCTGATGAGGAAAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400555.7
ENST00000400556.8
ENST00000583988.1
CDS-3UTR CAA 90 bp GACTATATAACTCTAGAAGTAAAATCAGCTGTTCAGCCAGTTCAGCTCGAAACCGCTCCGCTCTCACAGTaGGTTCTGTTAAATATGTTC +
Preference number: 5 (lower is better)
Translates to: DYITLEVKSAVQPVQLETAPLSQ*VLLNMF
Trigger: GAACATATTTAACAGAACCAACTGTGAGAGCGGAGC...GGTTTCGAGCTGAACTGGCTGAACAGCTGATTTTACTTCTAGAGTTATATAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp CAATATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCAAATATCTCCAAAATaGGCAGCACAGACCTTTCGA +
Preference number: 5 (lower is better)
Translates to: QYAALKSLSQSYLCWHQVQISPK*AAQTFR
Trigger: TCGAAAGGTCTGTGCTGCCAATTTTGGAGATATTTG...GACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp TGTAATATCCTTCCCAACCATGGGAGCCATTTTGCACATTATAGCCACAGCTTCCTGAGGTACAACATCTaGTACTTTAGTTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: CNILPNHGSHFAHYSHSFLRYNI*YFSSPF
Trigger: GAAAGGAGAACTAAAGTACAAGATGTTGTACCTCAG...GAAGCTGTGGCTATAATGTGCAAAATGGCTCCCATGGTTGGGAAGGATATTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp CATACATTATCAGAACAAAGCTGGAAAAATCTGGGCAGCAACATTTCTTCAGTATTCTCCACAAGCTCATaGATGAGGTCCACTCCGAAC +
Preference number: 5 (lower is better)
Translates to: HTLSEQSWKNLGSNISSVFSTSS*MRSTPN
Trigger: GTTCGGAGTGGACCTCATCAATGAGCTTGTGGAGAA...TACTGAAGAAATGTTGCTGCCCAGATTTTTCCAGCTTTGTTCTGATAATGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp TTAGGAGATGTAAAAACCCCTCCTTTCCCATTTGCACACGTCACAAACGATTCAAAAAAGCATATGGTATaGAAGGCCGGTTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: LGDVKTPPFPFAHVTNDSKKHMV*KAGFLD
Trigger: GTCAAGAAAACCGGCCTTCAATACCATATGCTTTTT...TGAATCGTTTGTGACGTGTGCAAATGGGAAAGGAGGGGTTTTTACATCTCCTAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS-3UTR CAA 90 bp GCTCTCACAGTTGGTTCTGAATCATCGGCCAATCTGCTAATTCTTTCCAAAACAAAAAAGCATATGGTATaGAAGGCCGGTTTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: ALTVGSESSANLLILSKTKKHMV*KAGFLD
Trigger: GTCAAGAAAACCGGCCTTCAATACCATATGCTTTTT...TGTTTTGGAAAGAATTAGCAGATTGGCCGATGATTCAGAACCAACTGTGAGAGC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS-3UTR CAA 90 bp CAGAAGAAACTTTGTCTGCACACAGATTCAGAGCAATGGGACGTAAATAGTCATCTAAAACTGCTATTGTaGCTCAAGTCTGAATCGCTG +
Preference number: 5 (lower is better)
Translates to: QKKLCLHTDSEQWDVNSHLKLLL*LKSESL
Trigger: CAGCGATTCAGACTTGAGCAACAATAGCAGTTTTAG...ATGACTATTTACGTCCCATTGCTCTGAATCTGTGTGCAGACAAAGTTTCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000285124.12
CDS-3UTR CAA 90 bp TATGCTGCGCTTAAGAGTTTAAGTCAATCCTACTTGTGTTGGCATCAGGTCCTTCTGAGGTACAACATCTaGTACTTTAGTTCTCCTTTC +
Preference number: 5 (lower is better)
Translates to: YAALKSLSQSYLCWHQVLLRYNI*YFSSPF
Trigger: GAAAGGAGAACTAAAGTACAAGATGTTGTACCTCAG...AAGGACCTGATGCCAACACAAGTAGGATTGACTTAAACTCTTAAGCGCAGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000400555.7
ENST00000400556.8
CDS GCA 90 bp GCTTTCATGAGATTAAAAATGTTTATCTGCTACTGTACATTATTCTaGGTTAGTATGAAAAGAGAAATGCTATCTAGTTGCTGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: AFMRLKMFICYCTLF*VSMKREMLSSCWSC
Trigger: GCAGCTCCAGCAACTAGATAGCATTTCTCTTTTCATACTAACGCAGAATAATGTACAGTAGCAGATAAACATTTTTAATCTCATGAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583988.1
CDS CAA 90 bp GATTCGGGGGCGCCGGGAGAAGAGAGCGAAGGGCGGAAAGCGAACTaGGGCGTTACTCCGGGCGTCTCCCTCCCCCAGCGGAACCTGGGC +
Preference number: 6 (lower is better)
Translates to: DSGAPGEESEGRKAN*GVTPGVSLPQRNLG
Trigger: GCCCAGGTTCCGCTGGGGGAGGGAGACGCCCGGAGTAACGCCCAAGTTCGCTTTCCGCCCTTCGCTCTCTTCTCCCGGCGCCCCCGAATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577393.1
CDS CAA 72 bp GCGCCGGGAGAAGAGAGCGAAGGGCGGAAAGCGAACTaGGGCGTTACTCCGGGCGTCTCCCTCCCCCAGCGG +
Preference number: 6 (lower is better)
Translates to: APGEESEGRKAN*GVTPGVSLPQR
Trigger: CCGCTGGGGGAGGGAGACGCCCGGAGTAACGCCCAAGTTCGCTTTCCGCCCTTCGCTCTCTTCTCCCGGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577393.1
CDS TCA 72 bp CCACCGCTTCTCCTTCCAAAACAGCCGCGCCACTGCTaGGCCCGCAGGCGATTCGGGGGCGCCGGGAGAAGA +
Preference number: 6 (lower is better)
Translates to: PPLLLPKQPRHC*ARRRFGGAGRR
Trigger: TCTTCTCCCGGCGCCCCCGAATCGCCTGCGGGCTCAGCAGTGGCGCGGCTGTTTTGGAAGGAGAAGCGGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577393.1
CDS CCA 72 bp GCGTTACTCCGGGCGTCTCCCTCCCCCAGCGGAACCTaGGCGCGCCGTTTCCTCACGGACGCGAGATTTTCC +
Preference number: 6 (lower is better)
Translates to: ALLRASPSPSGT*ARRFLTDARFS
Trigger: GGAAAATCTCGCGTCCGTGAGGAAACGGCGCGCCCAGGTTCCGCTGGGGGAGGGAGACGCCCGGAGTAACGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577393.1
CDS CCA 72 bp CGCCGGGAGAAGAGAGCGAAGGGCGGAAAGCGAACTTaGGCGTTACTCCGGGCGTCTCCCTCCCCCAGCGGA +
Preference number: 6 (lower is better)
Translates to: RREKRAKGGKRT*ALLRASPSPSG
Trigger: TCCGCTGGGGGAGGGAGACGCCCGGAGTAACGCCCAAGTTCGCTTTCCGCCCTTCGCTCTCTTCTCCCGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577393.1
CDS CCA 72 bp GCCCAGGGCCAGATGGTGGCTGGCAGGAGCATGGGGTaGCTCAAACAAAGCCAGATGTGCCCGACACAGGGA +
Preference number: 6 (lower is better)
Translates to: AQGQMVAGRSMG*LKQSQMCPTQG
Trigger: TCCCTGTGTCGGGCACATCTGGCTTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 72 bp CAGCTGCCCAGGGCCAGATGGTGGCTGGCAGGAGCATaGGGTGGCTCAAACAAAGCCAGATGTGCCCGACAC +
Preference number: 6 (lower is better)
Translates to: QLPRARWWLAGA*GGSNKARCARH
Trigger: GTGTCGGGCACATCTGGCTTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS GCA 72 bp CAGGGCAGGGAGAAATCAGCTCGAATTGCAGTCAGCTaGCCAGGGCCAGATGGTGGCTGGCAGGAGCATGGG +
Preference number: 6 (lower is better)
Translates to: QGREKSARIAVS*PGPDGGWQEHG
Trigger: CCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTGACTGCAATTCGAGCTGATTTCTCCCTGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 72 bp AGCTCGAATTGCAGTCAGCTGCCCAGGGCCAGATGGTaGCTGGCAGGAGCATGGGGTGGCTCAAACAAAGCC +
Preference number: 6 (lower is better)
Translates to: SSNCSQLPRARW*LAGAWGGSNKA
Trigger: GGCTTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTGACTGCAATTCGAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 72 bp GATGGGAAAGAGAACTGCCCCTCAGCAGAGCCCGGATaGACAGGACACCTGCTAGCACCTAACAGGGCAGGG +
Preference number: 6 (lower is better)
Translates to: DGKENCPSAEPG*TGHLLAPNRAG
Trigger: CCCTGCCCTGTTAGGTGCTAGCAGGTGTCCTGTCCATCCGGGCTCTGCTGAGGGGCAGTTCTCTTTCCCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CAA 90 bp GGACACCTGCTAGCACCTAACAGGGCAGGGAGAAATCAGCTCGAATaGCAGTCAGCTGCCCAGGGCCAGATGGTGGCTGGCAGGAGCATG +
Preference number: 6 (lower is better)
Translates to: GHLLAPNRAGRNQLE*QSAAQGQMVAGRSM
Trigger: CATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTGACTGCAATTCGAGCTGATTTCTCCCTGCCCTGTTAGGTGCTAGCAGGTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS GCA 72 bp GGCAGGAGCATGGGGTGGCTCAAACAAAGCCAGATGTaGCCGACACAGGGAGCTCACATTCCCAGACAACCT +
Preference number: 6 (lower is better)
Translates to: GRSMGWLKQSQM*PTQGAHIPRQP
Trigger: AGGTTGTCTGGGAATGTGAGCTCCCTGTGTCGGGCACATCTGGCTTTGTTTGAGCCACCCCATGCTCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 72 bp ATCAGCTCGAATTGCAGTCAGCTGCCCAGGGCCAGATaGTGGCTGGCAGGAGCATGGGGTGGCTCAAACAAA +
Preference number: 6 (lower is better)
Translates to: ISSNCSQLPRAR*WLAGAWGGSNK
Trigger: TTTGTTTGAGCCACCCCATGCTCCTGCCAGCCACCATCTGGCCCTGGGCAGCTGACTGCAATTCGAGCTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS GCA 72 bp CTCATTGATGAGGTCCACTCCGAACGTTGGTGGTGTTaGCGCGTGCAGCTTCTTCACCATCTCGCTGACCTG +
Preference number: 6 (lower is better)
Translates to: LIDEVHSERWWC*RVQLLHHLADL
Trigger: CAGGTCAGCGAGATGGTGAAGAAGCTGCACGCGGCAACACCACCAACGTTCGGAGTGGACCTCATCAATGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578329.1
CDS CCA 72 bp CCACTGTGTACCTGTCGAGGCTCTGAGGAGCCTTCCTaGAAGGGATTTGCTAGGGATAACAGAGGGAGGGTG +
Preference number: 6 (lower is better)
Translates to: PLCTCRGSEEPS*KGFARDNRGRV
Trigger: CACCCTCCCTCTGTTATCCCTAGCAAATCCCTTCCAGGAAGGCTCCTCAGAGCCTCGACAGGTACACAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS TCA 72 bp GTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTaGGACAAAGTCCAGGGATCCGTCTGCGTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: VQSPQGRQHFIL*DKVQGSVCVLL
Trigger: CAGGAGGACGCAGACGGATCCCTGGACTTTGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000285124.12
ENST00000400555.7
ENST00000577779.1
ENST00000578178.5
ENST00000580182.5
ENST00000580745.5
ENST00000581835.1
ENST00000582240.5
ENST00000584074.5
CDS GCA 72 bp AGGGCCTCGCTTACCTGGCAGACAAAGACAAAGGCTTaGCGACCAGACCACTTGGGACATCTGCCAAAGTTC +
Preference number: 6 (lower is better)
Translates to: RASLTWQTKTKA*RPDHLGHLPKF
Trigger: GAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGGTAAGCGAGGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578010.1
CDS GCA 72 bp AATGCTCCTTATTCCAGGAGGAGCTGTAGGAAGTCCTaGCCGAGACCAAGCACAGATAGGAGGTCCCACCCA +
Preference number: 6 (lower is better)
Translates to: NAPYSRRSCRKS*PRPSTDRRSHP
Trigger: TGGGTGGGACCTCCTATCTGTGCTTGGTCTCGGGCAGGACTTCCTACAGCTCCTCCTGGAATAAGGAGCATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CAA 72 bp CAGGGCCTCGCTTACCTGGCAGACAAAGACAAAGGCTaGCCGACCAGACCACTTGGGACATCTGCCAAAGTT +
Preference number: 6 (lower is better)
Translates to: QGLAYLADKDKG*PTRPLGTSAKV
Trigger: AACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGGTAAGCGAGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578010.1
CDS GCA 72 bp TGGCCCTCCGCAACATGGCCTCAAGTCCCGATCTTCTaGTCAGAATACTGTGTTGCTTGCTCAACAGCATCG +
Preference number: 6 (lower is better)
Translates to: WPSATWPQVPIF*SEYCVACSTAS
Trigger: CGATGCTGTTGAGCAAGCAACACAGTATTCTGAGCAGAAGATCGGGACTTGAGGCCATGTTGCGGAGGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578557.1
CDS CCA 72 bp GGTTGCAAAGCACACAAACAACCTAACTTCCCAAGATaGGAAAGAGAACTGCCCCTCAGCAGAGCCCGGATG +
Preference number: 6 (lower is better)
Translates to: GCKAHKQPNFPR*ERELPLSRARM
Trigger: CATCCGGGCTCTGCTGAGGGGCAGTTCTCTTTCCCATCTTGGGAAGTTAGGTTGTTTGTGTGCTTTGCAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CAA 90 bp TCGCTTACCTGGCAGACAAAGACAAAGGCTTGCCGACCAGACCACTaGGGACATCTGCCAAAGTTCTCCACAAGCTCATTGATGAGGTCC +
Preference number: 6 (lower is better)
Translates to: SLTWQTKTKACRPDH*GHLPKFSTSSLMRS
Trigger: GGACCTCATCAATGAGCTTGTGGAGAACTTTGGCAGATGTCCCAAGTGGTCTGGTCGGCAAGCCTTTGTCTTTGTCTGCCAGGTAAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578010.1
CDS TCA 72 bp GTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTaGGACAAAGTCCAGGGCTCAAAGGAAAGCTGCACT +
Preference number: 6 (lower is better)
Translates to: VQSPQGRQHFIL*DKVQGSKESCT
Trigger: AGTGCAGCTTTCCTTTGAGCCCTGGACTTTGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583903.5
CDS CCA 72 bp CAGGGTACCTGCCTCCCATGGGTGCTTCAAGAAAGATaGTCAGGAAAAACAGGAGAGATGTCTCATAGCAGG +
Preference number: 6 (lower is better)
Translates to: QGTCLPWVLQER*SGKTGEMSHSR
Trigger: CCTGCTATGAGACATCTCTCCTGTTTTTCCTGACCATCTTTCTTGAAGCACCCATGGGAGGCAGGTACCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS TCA 72 bp TCCTCCAGCAACCTTCCCATCACATCTGAGGGGCCCTaGGACTTTCATGACATCTACCAAGCTAACCTGAAA +
Preference number: 6 (lower is better)
Translates to: SSSNLPITSEGP*DFHDIYQANLK
Trigger: TTTCAGGTTAGCTTGGTAGATGTCATGAAAGTCTCAGGGCCCCTCAGATGTGATGGGAAGGTTGCTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS GCA 72 bp CAAAGCCTGTCCACCCTGTGGGCCCAGCAAAAATACTaGAACTGTGGGAGAGGAGAACTAATGCTCCTTATT +
Preference number: 6 (lower is better)
Translates to: QSLSTLWAQQKY*NCGRGELMLLI
Trigger: AATAAGGAGCATTAGTTCTCCTCTCCCACAGTTGCAGTATTTTTGCTGGGCCCACAGGGTGGACAGGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS GCA 72 bp TCTTCCGAGTGTCAAGGCCACACCAGGGAGGCTATATaGACAGTGCTTAGCAATTTCAGTGTCAACCGTTTG +
Preference number: 6 (lower is better)
Translates to: SSECQGHTREAI*TVLSNFSVNRL
Trigger: CAAACGGTTGACACTGAAATTGCTAAGCACTGTGCATATAGCCTCCCTGGTGTGGCCTTGACACTCGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584754.1
CDS TCA 72 bp AAACAGGAGAGATGTCTCATAGCAGGCAGAAGCAACTaGCTGACAGCCATGAATCATCAAGCACTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: KQERCLIAGRSN*LTAMNHQALCW
Trigger: CCAGCAGAGTGCTTGATGATTCATGGCTGTCAGTCAGTTGCTTCTGCCTGCTATGAGACATCTCTCCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS GCA 72 bp TGCACCTGGCCGATATCTGTTAAATATGTTCTCACTTaGAGCATACTTGTCCAATCTCCCCAGGGGCGTCAA +
Preference number: 6 (lower is better)
Translates to: CTWPISVKYVLT*SILVQSPQGRQ
Trigger: TTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGATATCGGCCAGGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS CAA 90 bp GCACCTGGCCGATATCTGTTAAATATGTTCTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTGAGACA +
Preference number: 6 (lower is better)
Translates to: APGRYLLNMFSLAAY*SNLPRGVNISSCET
Trigger: TGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGATATCGGCCAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS GCA 72 bp CAAGATCTTTTCTTGAGCCCATCAGAGAGCTGGGGTTaGAAAGCACACAAACAACCTAACTTCCCAAGATGG +
Preference number: 6 (lower is better)
Translates to: QDLFLSPSESWG*KAHKQPNFPRW
Trigger: CCATCTTGGGAAGTTAGGTTGTTTGTGTGCTTTGCAACCCCAGCTCTCTGATGGGCTCAAGAAAAGATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 72 bp CTGAGACAGAGCAAAGCACTTCCTAGTATGTTCAACTaGAACATGGCCCACACTGATCCATGGTCACAGTTT +
Preference number: 6 (lower is better)
Translates to: LRQSKALPSMFN*NMAHTDPWSQF
Trigger: AAACTGTGACCATGGATCAGTGTGGGCCATGTTCCAGTTGAACATACTAGGAAGTGCTTTGCTCTGTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CAA 72 bp ACTGGAACATGGCCCACACTGATCCATGGTCACAGTTaGGAATGTGCTGAGAAGCTTCCATCTACAATCAAG +
Preference number: 6 (lower is better)
Translates to: TGTWPTLIHGHS*ECAEKLPSTIK
Trigger: CTTGATTGTAGATGGAAGCTTCTCAGCACATTCCAAACTGTGACCATGGATCAGTGTGGGCCATGTTCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS TCA 72 bp GATCTTCTGCTCAGAATACTGTGTTGCTTGCTGCAGTaGAATGGTCCGATCAGAAACAAAGCACCTCTCCAA +
Preference number: 6 (lower is better)
Translates to: DLLLRILCCLLQ*NGPIRNKAPLQ
Trigger: TTGGAGAGGTGCTTTGTTTCTGATCGGACCATTTCACTGCAGCAAGCAACACAGTATTCTGAGCAGAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583438.1
CDS CCA 72 bp AGAGCAAAGCACTTCCTAGTATGTTCAACTGGAACATaGCCCACACTGATCCATGGTCACAGTTTGGAATGT +
Preference number: 6 (lower is better)
Translates to: RAKHFLVCSTGT*PTLIHGHSLEC
Trigger: ACATTCCAAACTGTGACCATGGATCAGTGTGGGCCATGTTCCAGTTGAACATACTAGGAAGTGCTTTGCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CAA 90 bp CTCTCACAGTTGGTTCTGTTAAATATGTTCTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTGAGACA +
Preference number: 6 (lower is better)
Translates to: LSQLVLLNMFSLAAY*SNLPRGVNISSCET
Trigger: TGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGAACCAACTGTGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000578178.5
ENST00000578875.5
CDS CAA 90 bp GTATGTTCAACTGGAACATGGCCCACACTGATCCATGGTCACAGTTaGGAATGTGCTGAGAAGCTTCCATCTACAATCAAGTTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: VCSTGTWPTLIHGHS*ECAEKLPSTIKFLS
Trigger: ACTGAGAAACTTGATTGTAGATGGAAGCTTCTCAGCACATTCCAAACTGTGACCATGGATCAGTGTGGGCCATGTTCCAGTTGAACATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 72 bp AAACTTCAAGATCTTTTCTTGAGCCCATCAGAGAGCTaGGGTTGCAAAGCACACAAACAACCTAACTTCCCA +
Preference number: 6 (lower is better)
Translates to: KLQDLFLSPSES*GCKAHKQPNFP
Trigger: TGGGAAGTTAGGTTGTTTGTGTGCTTTGCAACCCCAGCTCTCTGATGGGCTCAAGAAAAGATCTTGAAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS CCA 72 bp TGTAAGGAAAACAAAAGCTGTAGAGTTCTGCATCCATaGGGACTGAGACAGAGCAAAGCACTTCCTAGTATG +
Preference number: 6 (lower is better)
Translates to: CKENKSCRVLHP*GLRQSKALPSM
Trigger: CATACTAGGAAGTGCTTTGCTCTGTCTCAGTCCCCATGGATGCAGAACTCTACAGCTTTTGTTTTCCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS TCA 72 bp GTCCAATCTCCCCAGGGGCGTCAACATTTCATCTTGTaGGACAAAGTCCAGGGCTTATTAATTATAAATCAG +
Preference number: 6 (lower is better)
Translates to: VQSPQGRQHFIL*DKVQGLLIINQ
Trigger: CTGATTTATAATTAATAAGCCCTGGACTTTGTCTCACAAGATGAAATGTTGACGCCCCTGGGGAGATTGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579638.5
CDS GCA 72 bp AAGAATATGCACATACCTGTTAAATATGTTCTCACTTaGAGCATACTTGTCCAATCTCCCCAGGGGCGTCAA +
Preference number: 6 (lower is better)
Translates to: KNMHIPVKYVLT*SILVQSPQGRQ
Trigger: TTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGGTATGTGCATATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577779.1
ENST00000580283.1
CDS GCA 72 bp AAAGCTGCTTGGCGAACCAACATTTCTTCAGTAGCTTaGTGGCCAACTACACTGCAAATATCTCCAAAATTG +
Preference number: 6 (lower is better)
Translates to: KAAWRTNISSVA*WPTTLQISPKL
Trigger: CAATTTTGGAGATATTTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAATGTTGGTTCGCCAAGCAGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580583.5
CDS CAA 72 bp TTGGTTCTGTTAAATATGTTCTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGCGTCAACATTTCATCT +
Preference number: 6 (lower is better)
Translates to: LVLLNMFSLAAY*SNLPRGVNISS
Trigger: AGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGAACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000285124.12
ENST00000578178.5
ENST00000578875.5
CDS CAA 72 bp CGATATCTGTTAAATATGTTCTCACTTGCAGCATACTaGTCCAATCTCCCCAGGGGCGTCAACATTTCATCT +
Preference number: 6 (lower is better)
Translates to: RYLLNMFSLAAY*SNLPRGVNISS
Trigger: AGATGAAATGTTGACGCCCCTGGGGAGATTGGACAAGTATGCTGCAAGTGAGAACATATTTAACAGATATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580182.5
CDS GCA 72 bp TTCTGCGTTAGTATGAAAAGAGAAATGCTATCTAGTTaGTGGAGCTGCCTCCGGCTTATTAAAAGGAGTCAA +
Preference number: 6 (lower is better)
Translates to: FCVSMKREMLSS*WSCLRLIKRSQ
Trigger: TTGACTCCTTTTAATAAGCCGGAGGCAGCTCCAGCAACTAGATAGCATTTCTCTTTTCATACTAACGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583988.1
CDS CAA 72 bp AAAAGCTGCTTGGCGAACCAACATTTCTTCAGTAGCTaGCTGGCCAACTACACTGCAAATATCTCCAAAATT +
Preference number: 6 (lower is better)
Translates to: KSCLANQHFFSS*LANYTANISKI
Trigger: AATTTTGGAGATATTTGCAGTGTAGTTGGCCAGCAAGCTACTGAAGAAATGTTGGTTCGCCAAGCAGCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000580583.5
CDS CCA 72 bp TGCGTTAGTATGAAAAGAGAAATGCTATCTAGTTGCTaGAGCTGCCTCCGGCTTATTAAAAGGAGTCAATTT +
Preference number: 6 (lower is better)
Translates to: CVSMKREMLSSC*SCLRLIKRSQF
Trigger: AAATTGACTCCTTTTAATAAGCCGGAGGCAGCTCCAGCAACTAGATAGCATTTCTCTTTTCATACTAACGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583988.1
CDS TCA 72 bp GCTCAGAATACTGTGTTGCTTGCTCAACAGCATCGCTaGTTAAAGGCACAGAATCTTCTTGATTTATTTTAC +
Preference number: 6 (lower is better)
Translates to: AQNTVLLAQQHR*LKAQNLLDLFY
Trigger: GTAAAATAAATCAAGAAGATTCTGTGCCTTTAATCAGCGATGCTGTTGAGCAAGCAACACAGTATTCTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578557.1
CDS TCA 72 bp AGCTTCAATGATGGCCTTGAAGAAATACCTTGGATGTaGGACTTTTGCCTTTCAGATTTTATGTTCAAGAGG +
Preference number: 6 (lower is better)
Translates to: SFNDGLEEIPWM*DFCLSDFMFKR
Trigger: CCTCTTGAACATAAAATCTGAAAGGCAAAAGTCTCACATCCAAGGTATTTCTTCAAGGCCATCATTGAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582594.5
CDS TCA 72 bp AGTGAAGAGTGGAGTCCATATTCTCAACAGCATCGCTaGTTAAAGGCACAGAATCTTCTTGATTTATTTTAC +
Preference number: 6 (lower is better)
Translates to: SEEWSPYSQQHR*LKAQNLLDLFY
Trigger: GTAAAATAAATCAAGAAGATTCTGTGCCTTTAATCAGCGATGCTGTTGAGAATATGGACTCCACTCTTCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000400555.7
ENST00000400556.8
ENST00000583988.1