RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP3CA (Homo sapiens)

Ensembl gene IDs: ENSG00000138814

Ensembl transcript IDs: ENST00000323055.10, ENST00000394853.8, ENST00000394854.8, ENST00000492351.6, ENST00000507176.5, ENST00000510292.1, ENST00000512215.5, ENST00000525819.1, ENST00000529324.5

Found 462 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCATGAATGTCCCCACAAACCAAGGTACACAGAGAAAAGTCCTTTaGGTGGTTGTCAGTAGTTTACATTCCTTCCCTGCCATGTGTGAA +
Preference number: 1 (lower is better)
Translates to: SMNVPTNQGTQRKVL*VVVSSLHSFPAMCE
Trigger: TTCACACATGGCAGGGAAGGAATGTAAACTACTGACAACCACCCAAAGGACTTTTCTCTGTGTACCTTGGTTTGTGGGGACATTCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492351.6
3UTR TCA 90 bp GAAGCCAGAAGATGGCATCTGCTCTTTAAACAGGCTTCTCTTATCTaGTTTGAGACACAAATCCACCAAGATTCTTTCTTACAGTGGAAG +
Preference number: 1 (lower is better)
Translates to: EARRWHLLFKQASLI*FETQIHQDSFLQWK
Trigger: CTTCCACTGTAAGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAAAGAGCAGATGCCATCTTCTGGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR TCA 90 bp AAGTGTTATATGGAAAGAAGGGCATTCAAGCACACTAAAGAAACCTaGGGTAAGCATAATCTGTACAAAATTAAACTGTCCTTTTTGGCA +
Preference number: 1 (lower is better)
Translates to: KCYMERRAFKHTKET*GKHNLYKIKLSFLA
Trigger: TGCCAAAAAGGACAGTTTAATTTTGTACAGATTATGCTTACCTCAGGTTTCTTTAGTGTGCTTGAATGCCCTTCTTTCCATATAACACTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR CCA 90 bp GGAACTGTTGGTTCATCAGGGCAGCCAGGGGAAGGCAGTCAAAGGCATCCATACAGAGGTAGCGAGTGTTaGCAGGAGATCCCCCGACTT +
Preference number: 2 (lower is better)
Translates to: GTVGSSGQPGEGSQRHPYRGSEC*QEIPRL
Trigger: AAGTCGGGGGATCTCCTGCCAACACTCGCTACCTCT...GTATGGATGCCTTTGACTGCCTTCCCCTGGCTGCCCTGATGAACCAACAGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492351.6
3UTR-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAATCCAACTGCTGATATaGAGCAATCCCCATCATGCC +
Preference number: 2 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEIQLLI*SNPHHA
Trigger: GGCATGATGGGGATTGCTGCATATCAGCAGTTGGAT...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp GGAACTGTTGGTTCATCAGGGCAGCCAGGGGAAGGCAGTCAAAGGCATCCATACCTTCCCTGCCATGTGTaGAATCTCCTTTCTGTGTCA +
Preference number: 2 (lower is better)
Translates to: GTVGSSGQPGEGSQRHPYLPCHV*NLLSVS
Trigger: TGACACAGAAAGGAGATTTCACACATGGCAGGGAAG...GTATGGATGCCTTTGACTGCCTTCCCCTGGCTGCCCTGATGAACCAACAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492351.6
3UTR-3UTR TCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACACACTAAAGAAACCTaGGGTAAGCATAATCTGTAC +
Preference number: 2 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEHTKET*GKHNLY
Trigger: GTACAGATTATGCTTACCTCAGGTTTCTTTAGTGTG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGAGAACATCCAACTGCTaGTATGCAGCAATCCCCATC +
Preference number: 2 (lower is better)
Translates to: SSICQTTKRITVPYRPIQRTSNC*YAAIPI
Trigger: GATGGGGATTGCTGCATATCAGCAGTTGGATGTTCT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp GGAACTGTTGGTTCATCAGGGCAGCCAGGGGAAGGCAGTCAAAGGCATCCATACAATTACCTTCAATACTaGAGTACCCTCTGTCAACAT +
Preference number: 2 (lower is better)
Translates to: GTVGSSGQPGEGSQRHPYNYLQY*STLCQH
Trigger: ATGTTGACAGAGGGTACTTCAGTATTGAAGGTAATT...GTATGGATGCCTTTGACTGCCTTCCCCTGGCTGCCCTGATGAACCAACAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492351.6
3UTR-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGACTGAATCCAATTCCTaGCCCCCAGAGCAAATAAGC +
Preference number: 2 (lower is better)
Translates to: SSICQTTKRITVPYRPIQTESNS*PPEQIS
Trigger: GCTTATTTGCTCTGGGGGCCAGGAATTGGATTCAGT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGAATGATAGTGTAAACTaGATCCAATTCCTGGCCCCC +
Preference number: 2 (lower is better)
Translates to: SSICQTTKRITVPYRPIQNDSVN*IQFLAP
Trigger: GGGGGCCAGGAATTGGATTCAGTTTACACTATCATT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTCTAGAAGTCCCCAATaGAGTAGGAAAACATGTTCA +
Preference number: 2 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYSRSPQ*SRKTCS
Trigger: TGAACATGTTTTCCTACTGCATTGGGGACTTCTAGA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACAGAACATCCAACTGCTaGTATGCAGCAATCCCCATC +
Preference number: 2 (lower is better)
Translates to: SNYKGKALGCSELLGHLYRTSNC*YAAIPI
Trigger: GATGGGGATTGCTGCATATCAGCAGTTGGATGTTCT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAGAACATCCAACTGCTaGTATGCAGCAATCCCCATC +
Preference number: 2 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGRTSNC*YAAIPI
Trigger: GATGGGGATTGCTGCATATCAGCAGTTGGATGTTCT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
3UTR-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAATCCAACTGCTGATATaGAGCAATCCCCATCATGCC +
Preference number: 2 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGIQLLI*SNPHHA
Trigger: GGCATGATGGGGATTGCTGCATATCAGCAGTTGGAT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
3UTR-3UTR CCA 90 bp TCACACATAGGTCCATATGCAGGTGGTTCTTTGAATCGGTCTAATTTTCTGATAGCAGATGGGAGGCTGTaGAAGAACCTCTATTCAAAG +
Preference number: 2 (lower is better)
Translates to: SHIGPYAGGSLNRSNFLIADGRL*KNLYSK
Trigger: CTTTGAATAGAGGTTCTTCCACAGCCTCCCATCTGC...TATCAGAAAATTAGACCGATTCAAAGAACCACCTGCATATGGACCTATGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492351.6
3UTR CAA 90 bp CCAGAAGATGGCATCTGCTCTTTAAACAGGCTTCTCTTATCTGATTaGAGACACAAATCCACCAAGATTCTTTCTTACAGTGGAAGTAGG +
Preference number: 2 (lower is better)
Translates to: PEDGICSLNRLLLSD*RHKSTKILSYSGSR
Trigger: CCTACTTCCACTGTAAGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAAAGAGCAGATGCCATCTTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTAGAACATCCAACTGCTaGTATGCAGCAATCCCCATC +
Preference number: 2 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLRTSNC*YAAIPI
Trigger: GATGGGGATTGCTGCATATCAGCAGTTGGATGTTCT...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACCACACTAAAGAAACCTaGGGTAAGCATAATCTGTAC +
Preference number: 2 (lower is better)
Translates to: QKSNYKGKALGCSELLGHHTKET*GKHNLY
Trigger: GTACAGATTATGCTTACCTCAGGTTTCTTTAGTGTG...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTCTAGAAGTCCCCAATaGAGTAGGAAAACATGTTCA +
Preference number: 2 (lower is better)
Translates to: QKSNYKGKALGCSELLGHSRSPQ*SRKTCS
Trigger: TGAACATGTTTTCCTACTGCATTGGGGACTTCTAGA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR CCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTACTGAATCCAATTCCTaGCCCCCAGAGCAAATAAGC +
Preference number: 2 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLTESNS*PPEQIS
Trigger: GCTTATTTGCTCTGGGGGCCAGGAATTGGATTCAGT...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR CCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACAAGATAAGTGTTATATaGAAAGAAGGGCATTCAAGC +
Preference number: 2 (lower is better)
Translates to: QKSNYKGKALGCSELLGHKISVI*KEGHSS
Trigger: GCTTGAATGCCCTTCTTTCCATATAACACTTATCTT...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR TCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTTACAAGTGCATGCTTTaGTTGCCAACATGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSYKCML*LPTCQK
Trigger: CTTCTGACATGTTGGCAATCAAAGCATGCACTTGTA...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACAAGATAAGTGTTATATaGAAAGAAGGGCATTCAAGC +
Preference number: 2 (lower is better)
Translates to: SNYKGKALGCSELLGHLYKISVI*KEGHSS
Trigger: GCTTGAATGCCCTTCTTTCCATATAACACTTATCTT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR CCA 72 bp ACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTaGAAATCAGCCTGTGATGTGTGGTGGTGGGCCAGC +
Preference number: 3 (lower is better)
Translates to: TPQITRPLGRSL*KSACDVWWWAS
Trigger: GCTGGCCCACCACCACACATCACAGGCTGATTTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR CAA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAGCTGTAGTGAATTACTaGGGCACTTATACAATTGTT +
Preference number: 3 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEAVVNY*GTYTIV
Trigger: AACAATTGTATAAGTGCCCAAGTAATTCACTACAGC...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR TCA 72 bp AATAAGCTACTGTCAGAGGCAAGAACATCCAACTGCTaGTATGCAGCAATCCCCATCATGCCCCGCAGCTCA +
Preference number: 3 (lower is better)
Translates to: NKLLSEARTSNC*YAAIPIMPRSS
Trigger: TGAGCTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCTGACAGTAGCTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
3UTR CCA 72 bp GTCCCCACAAACCAAGGTACACAGAGAAAAGTCCTTTaGGTGGTTGTCAGTAGTTTACATTCCTTCCCTGCC +
Preference number: 3 (lower is better)
Translates to: VPTNQGTQRKVL*VVVSSLHSFPA
Trigger: GGCAGGGAAGGAATGTAAACTACTGACAACCACCCAAAGGACTTTTCTCTGTGTACCTTGGTTTGTGGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492351.6
3UTR GCA 72 bp TTAACTGGCTCCTTGAGGAAGCCAGAAGATGGCATCTaGTCTTTAAACAGGCTTCTCTTATCTGATTTGAGA +
Preference number: 3 (lower is better)
Translates to: LTGSLRKPEDGI*SLNRLLLSDLR
Trigger: TCTCAAATCAGATAAGAGAAGCCTGTTTAAAGAGCAGATGCCATCTTCTGGCTTCCTCAAGGAGCCAGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR TCA 72 bp ATGGAAAGAAGGGCATTCAAGCACACTAAAGAAACCTaGGGTAAGCATAATCTGTACAAAATTAAACTGTCC +
Preference number: 3 (lower is better)
Translates to: MERRAFKHTKET*GKHNLYKIKLS
Trigger: GGACAGTTTAATTTTGTACAGATTATGCTTACCTCAGGTTTCTTTAGTGTGCTTGAATGCCCTTCTTTCCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR TCA 72 bp AGATGGCATCTGCTCTTTAAACAGGCTTCTCTTATCTaGTTTGAGACACAAATCCACCAAGATTCTTTCTTA +
Preference number: 3 (lower is better)
Translates to: RWHLLFKQASLI*FETQIHQDSFL
Trigger: TAAGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAAAGAGCAGATGCCATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR-3UTR CAA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTGCTGTAGTGAATTACTaGGGCACTTATACAATTGTT +
Preference number: 3 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSAVVNY*GTYTIV
Trigger: AACAATTGTATAAGTGCCCAAGTAATTCACTACAGC...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR CCA 72 bp TTCCATTGCCGAATTAAGAAGAAGATAAGTGTTATATaGAAAGAAGGGCATTCAAGCACACTAAAGAAACCT +
Preference number: 3 (lower is better)
Translates to: FHCRIKKKISVI*KEGHSSTLKKP
Trigger: AGGTTTCTTTAGTGTGCTTGAATGCCCTTCTTTCCATATAACACTTATCTTCTTCTTAATTCGGCAATGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAGCTCGTCCGTCCGACTaGACACCCCGACCGGACCGG +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEARPSD*TPRPDR
Trigger: CCGGTCCGGTCGGGGTGTGCAGTCGGACGGACGAGC...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAATCGGACATCTCCAGCTaGCGGAGGACAGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVESDISS*RRTATR
Trigger: GCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGA...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCCACCAGCCGCACCTTaGCGTCCCCGGCGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQPPAAP*RPRRRR
Trigger: TCTCCGCCGCCGGGGACGCCAAGGTGCGGCTGGTGG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACGACTCGCTCCGGGCTaGGCGTGTGTGGTGGTTATT +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVERLAPG*ACVVVI
Trigger: AATAACCACCACACACGCGCAGCCCGGAGCGAGTCG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACTCCGCTGGGGAGCATaGCAGTTGGGGTCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVELRWGA*QLGSSL
Trigger: AAGGCTTGACCCCAACTGGCATGCTCCCCAGCGGAG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAGTGGAAATCAGCCTGTaGTGTGTGGTGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEVEISL*CVVVGQ
Trigger: CTGGCCCACCACCACACATCACAGGCTGATTTCCAC...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTCGGACATCTCCAGCTaGCGGAGGACAGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQSDISS*RRTATR
Trigger: GCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGCCACCAGCCGCACCTTaGCGTCCCCGGCGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQPPAAP*RPRRRR
Trigger: TCTCCGCCGCCGGGGACGCCAAGGTGCGGCTGGTGG...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCCACCAGCCGCACCTTaGCGTCCCCGGCGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHPPAAP*RPRRRR
Trigger: TCTCCGCCGCCGGGGACGCCAAGGTGCGGCTGGTGG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACAGAAAGTACTCCGCTaGGGAGCATGCCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEQKVLR*GACQLG
Trigger: CCCCAACTGGCATGCTCCCCAGCGGAGTACTTTCTG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGGCCGCCGATGTCAGTaGCACCAGCCGCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQGRRCQ*HQPHLG
Trigger: GCCAAGGTGCGGCTGGTGGCACTGACATCGGCGGCC...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCTCCGCTGGGGAGCATaGCAGTTGGGGTCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQLRWGA*QLGSSL
Trigger: AAGGCTTGACCCCAACTGGCATGCTCCCCAGCGGAG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACGGTCGTCGACAACTTaGGATCAATTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVERSSTT*DQLPWA
Trigger: AGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGAGGACAGCGACGCGCTaGTCGTCCGTCCGACTGCAC +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQRTATR*SSVRLH
Trigger: GTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAGGAGACAAACCACCATaGACACACAGGAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEGDKPP*THRNCW
Trigger: CCAACAGTTCCTGTGTGTGCATGGTGGTTTGTCTCC...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394854.8
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGTACATGCGGTACCCTaGATCTTGGGCTTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQVHAVP*ILGFVG
Trigger: GCCCACGAAGCCCAAGATGCAGGGTACCGCATGTAC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCAGAAAGTACTCCGCTaGGGAGCATGCCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQQKVLR*GACQLG
Trigger: CCCCAACTGGCATGCTCCCCAGCGGAGTACTTTCTG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTCGGACATCTCCAGCTaGCGGAGGACAGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYSDISS*RRTATR
Trigger: GCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGAGAGGTAGCGAGTGTTaGCAGGAGATCCCCCGACTT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQRGSEC*QEIPRL
Trigger: AAGTCGGGGGATCTCCTGCCAACACTCGCTACCTCT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGTGGCGTCAGAGGGCATaGCATCTCTGCGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQWRQRA*HLCEAA
Trigger: TGCCGCCTCGCAGAGATGCCATGCCCTCTGACGCCA...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTGGCGTCAGAGGGCATaGCATCTCTGCGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHWRQRA*HLCEAA
Trigger: TGCCGCCTCGCAGAGATGCCATGCCCTCTGACGCCA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACTAGGAAGAAGCCTGTaGAAATCAGCCTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVELGRSL*KSACDV
Trigger: CACATCACAGGCTGATTTCCACAGGCTTCTTCCTAG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp GGAACTGTTGGTTCATCAGGGCAGCCAGGGGAAGGCAGTCAAAGGCATCCATACATCTTCCAGGGGGTCTaGCCACAGGATATCACACAT +
Preference number: 4 (lower is better)
Translates to: GTVGSSGQPGEGSQRHPYIFQGV*PQDITH
Trigger: ATGTGTGATATCCTGTGGTCAGACCCCCTGGAAGAT...GTATGGATGCCTTTGACTGCCTTCCCCTGGCTGCCCTGATGAACCAACAGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR TCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAAATGATAGTGTAAACTaGATCCAATTCCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVENDSVN*IQFLAP
Trigger: GGGGGCCAGGAATTGGATTCAGTTTACACTATCATT...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCGACTCGCTCCGGGCTaGGCGTGTGTGGTGGTTATT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHRLAPG*ACVVVI
Trigger: AATAACCACCACACACGCGCAGCCCGGAGCGAGTCG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCACCTCTTTCCGGGCTaGAGCTGTTGCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQHLFPG*SCCTIK
Trigger: TTTGATGGTGCAACAGCTGCAGCCCGGAAAGAGGTG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCTCCGCTGGGGAGCATaGCAGTTGGGGTCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHLRWGA*QLGSSL
Trigger: AAGGCTTGACCCCAACTGGCATGCTCCCCAGCGGAG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACCAGAAGATGGCATCTaGTCTTTAAACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEPEDGI*SLNRLL
Trigger: GAGAAGCCTGTTTAAAGAGCAGATGCCATCTTCTGG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCCACCAGCCGCACCTTaGCGTCCCCGGCGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYPPAAP*RPRRRR
Trigger: TCTCCGCCGCCGGGGACGCCAAGGTGCGGCTGGTGG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTGGGATCAATTGCCTTaGGCTCGGACATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQWDQLP*ARTSPA
Trigger: AGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCGGTCGTCGACAACTTaGGATCAATTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQRSSTT*DQLPWA
Trigger: AGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAATGTAAGCCGGTGACTTaGAGGAAATGGAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVECKPVT*RKWNSF
Trigger: AAAGCTGTTCCATTTCCTCCAAGTCACCGGCTTACA...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGCGGTACCCTGCATCTTaGGCTTCGTGGGCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQRYPAS*ASWARS
Trigger: ACTCCGAGCCCACGAAGCCCAAGATGCAGGGTACCG...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR TCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTGGAGGTCTAGGCTCTaGGCTGGCTTTAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQWRSRL*AGFKVA
Trigger: AGCAACTTTAAAGCCAGCTCAGAGCCTAGACCTCCA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAATACAAGTGCATGCTTTaGTTGCCAACATGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEYKCML*LPTCQK
Trigger: CTTCTGACATGTTGGCAATCAAAGCATGCACTTGTA...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGTGGAAATCAGCCTGTaGTGTGTGGTGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQVEISL*CVVVGQ
Trigger: CTGGCCCACCACCACACATCACAGGCTGATTTCCAC...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTGTTGCTGCTGCCGCTaGCCCTGCTTCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYCCCCR*PCFSTQ
Trigger: CTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACCGACTCGCTCCGGGCTaGGCGTGTGTGGTGGTTATT +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYRLAPG*ACVVVI
Trigger: AATAACCACCACACACGCGCAGCCCGGAGCGAGTCG...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGCTCGTCCGTCCGACTaGACACCCCGACCGGACCGG +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKARPSD*TPRPDR
Trigger: CCGGTCCGGTCGGGGTGTGCAGTCGGACGGACGAGC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACAGGACAGCGACGCGCTaGTCGTCCGTCCGACTGCAC +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHRTATR*SSVRLH
Trigger: GTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCT...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACCCTCCTTCATAAGATaGGCCTTTAAGATATCCACA +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEPSFIR*AFKIST
Trigger: TGTGGATATCTTAAAGGCGCATCTTATGAAGGAGGG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATGTACATGCGGTACCCTaGATCTTGGGCTTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHVHAVP*ILGFVG
Trigger: GCCCACGAAGCCCAAGATGCAGGGTACCGCATGTAC...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATGGGGAGCATGCCAGTTaGGGTCAAGCCTTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHGEHAS*GQAFQR
Trigger: ACGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCC...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGGGGAGCATGCCAGTTaGGGTCAAGCCTTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQGEHAS*GQAFQR
Trigger: ACGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCC...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp GGAACTGTTGGTTCATCAGGGCAGCCAGGGGAAGGCAGTCAAAGGCATCCATACGCAGATGGGAGGCTGTaGAAGAACCTCTATTCAAAG +
Preference number: 4 (lower is better)
Translates to: GTVGSSGQPGEGSQRHPYADGRL*KNLYSK
Trigger: CTTTGAATAGAGGTTCTTCCACAGCCTCCCATCTGC...GTATGGATGCCTTTGACTGCCTTCCCCTGGCTGCCCTGATGAACCAACAGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR TCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGAGAACATCCAACTGCTaGTATGCAGCAATCCCCATC +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQRTSNC*YAAIPI
Trigger: GATGGGGATTGCTGCATATCAGCAGTTGGATGTTCT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTGCTCGTCCGTCCGACTaGACACCCCGACCGGACCGG +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLARPSD*TPRPDR
Trigger: CCGGTCCGGTCGGGGTGTGCAGTCGGACGGACGAGC...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGGCATGGCATCTCTaGGAGGCGGCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYRAWHL*EAASSH
Trigger: ATGAGAGGATGCCGCCTCGCAGAGATGCCATGCCCT...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGTGACTTGGAGGAAATaGAACAGCTTTCACCACCCT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQVTWRK*NSFHHP
Trigger: AGGGTGGTGAAAGCTGTTCCATTTCCTCCAAGTCAC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGCACTGAGAACACTCTaGCCATTTTGCCTATTGCTC +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQALRTL*PFCLLL
Trigger: GAGCAATAGGCAAAATGGCCAGAGTGTTCTCAGTGC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACCAGAAAGTACTCCGCTaGGGAGCATGCCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYQKVLR*GACQLG
Trigger: CCCCAACTGGCATGCTCCCCAGCGGAGTACTTTCTG...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTGGCGTCAGAGGGCATaGCATCTCTGCGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHWRQRA*HLCEAA
Trigger: TGCCGCCTCGCAGAGATGCCATGCCCTCTGACGCCA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAAACATCCATGAAATTTaGAAGCCAGTATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVENIHEI*KPVWMR
Trigger: CCTCATCCATACTGGCTTCCAAATTTCATGGATGTT...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGTAACTGTAGAAGTATaGACACCCCCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQVTVEV*TPPDCV
Trigger: AACACAGTCAGGGGGTGTTCATACTTCTACAGTTAC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR TCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCGTGCCGTTAGTCTCTaGGGTGAGAGCCTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHRAVSL*GESLVD
Trigger: ATCAACAAGGCTCTCACCTCAGAGACTAACGGCACG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR TCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGAATGATAGTGTAAACTaGATCCAATTCCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQNDSVN*IQFLAP
Trigger: GGGGGCCAGGAATTGGATTCAGTTTACACTATCATT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR TCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAGGCATCCAATACAACTaGAACAACCTGATAACAAAT +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEGIQYN*NNLITN
Trigger: ATTTGTTATCAGGTTGTTTCAGTTGTATTGGATGCC...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTGTTGCTGCTGCCGCTaGCCCTGCTTCTCCACACAG +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHCCCCR*PCFSTQ
Trigger: CTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATGCCGCTGTTGCTGCTaGCGCTGCCCCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKCRCCC*RCPCFS
Trigger: GGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACCGACTCGCTCCGGGCTaGGCGTGTGTGGTGGTTATT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHRLAPG*ACVVVI
Trigger: AATAACCACCACACACGCGCAGCCCGGAGCGAGTCG...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACAGGACAGCGACGCGCTaGTCGTCCGTCCGACTGCAC +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYRTATR*SSVRLH
Trigger: GTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAAGGACAGCGACGCGCTaGTCGTCCGTCCGACTGCAC +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKRTATR*SSVRLH
Trigger: GTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATCGGACATCTCCAGCTaGCGGAGGACAGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGSDISS*RRTATR
Trigger: GCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATCGGACATCTCCAGCTaGCGGAGGACAGCGACGCGC +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKSDISS*RRTATR
Trigger: GCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAACTGTTGGTTCATCAGGGCAGCCAGGGGAAGGCAGTCAAAGGCATCCATACACACATAGGTCCATATaGAGGTGGTTCTTTGAATCG +
Preference number: 4 (lower is better)
Translates to: GTVGSSGQPGEGSQRHPYTHRSI*RWFFES
Trigger: CGATTCAAAGAACCACCTGCATATGGACCTATGTGT...GTATGGATGCCTTTGACTGCCTTCCCCTGGCTGCCCTGATGAACCAACAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCACCTCTTTCCGGGCTaGAGCTGTTGCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHHLFPG*SCCTIK
Trigger: TTTGATGGTGCAACAGCTGCAGCCCGGAAAGAGGTG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCCAGAAGATGGCATCTaGTCTTTAAACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQPEDGI*SLNRLL
Trigger: GAGAAGCCTGTTTAAAGAGCAGATGCCATCTTCTGG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCCTTGGGATAGTCTTTaGCAGACTGTATCGAGAACA +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQPWDSL*QTVSRT
Trigger: TGTTCTCGATACAGTCTGGCAAAGACTATCCCAAGG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTAAGACCGATCACATaGGGAAGGCCGGGGGCGAGG +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHLRPIT*GRPGAR
Trigger: CCTCGCCCCCGGCCTTCCCCATGTGATCGGTCTTAA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTGTAAGCCGGTGACTTaGAGGAAATGGAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQCKPVT*RKWNSF
Trigger: AAAGCTGTTCCATTTCCTCCAAGTCACCGGCTTACA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGAGGAAGCCAGAAGATaGCATCTGCTCTTTAAACAG +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQEEARR*HLLFKQ
Trigger: CTGTTTAAAGAGCAGATGCCATCTTCTGGCTTCCTC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATATCTTCCAGGGGGTCTaGCCACAGGATATCACACAT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHIFQGV*PQDITH
Trigger: ATGTGTGATATCCTGTGGTCAGACCCCCTGGAAGAT...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR TCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTCTCACTCTCTTCTCTaGGCACTGAGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHSHSLL*ALRTLW
Trigger: CCAGAGTGTTCTCAGTGCTCAGAGAAGAGAGTGAGA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR TCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGACTCAGTGGAAGGATaGGAATTCTGTAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQDSVEG*EFCKFM
Trigger: CATGAACTTACAGAATTCTCATCCTTCCACTGAGTC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGATCAAACACTTCTTTTaGTGTAAGCCGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQIKHFF*CKPVTW
Trigger: CCAAGTCACCGGCTTACAGCAAAAGAAGTGTTTGAT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCCCTCCTTCATAAGATaGGCCTTTAAGATATCCACA +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQPSFIR*AFKIST
Trigger: TGTGGATATCTTAAAGGCGCATCTTATGAAGGAGGG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGGAGACAAACCACCATaGACACACAGGAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQGDKPP*THRNCW
Trigger: CCAACAGTTCCTGTGTGTGCATGGTGGTTTGTCTCC...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGACACATAGGTCCATATaGAGGTGGTTCTTTGAATCG +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQTHRSI*RWFFES
Trigger: CGATTCAAAGAACCACCTGCATATGGACCTATGTGT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACGGCTTTTCCTGTACATaGGGTACCCTGCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYGFSCT*GTLHLG
Trigger: CCCAAGATGCAGGGTACCGCATGTACAGGAAAAGCC...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACCACCTCTTTCCGGGCTaGAGCTGTTGCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYHLFPG*SCCTIK
Trigger: TTTGATGGTGCAACAGCTGCAGCCCGGAAAGAGGTG...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATGCGCTTTGCAGGGTTTaGTTCCCTCCAGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHALCRV*FPPEST
Trigger: AGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGC...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGCCTTTGATAGCGCTTTaGAGGGTTTGCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQPLIAL*RVCFPP
Trigger: TGGAGGGAAGCAAACCCTGCAAAGCGCTATCAAAGG...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394853.8
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACAGGGCATGGCATCTCTaGGAGGCGGCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHRAWHL*EAASSH
Trigger: ATGAGAGGATGCCGCCTCGCAGAGATGCCATGCCCT...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAATCTTTGTTTGGGTATaGTATATCGCTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEIFVWV*YIANCH
Trigger: ATGGCAATTAGCGATATAGCATACCCAAACAAAGAT...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCGGGCTGCGCGTGTGTaGTGGTTATTTATTTATTTT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQRAARV*WLFIYF
Trigger: AAAATAAATAAATAACCACCACACACGCGCAGCCCG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTGGCGTCAGAGGGCATaGCATCTCTGCGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYWRQRA*HLCEAA
Trigger: TGCCGCCTCGCAGAGATGCCATGCCCTCTGACGCCA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATGGCGTCAGAGGGCATaGCATCTCTGCGAGGCGGCA +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGWRQRA*HLCEAA
Trigger: TGCCGCCTCGCAGAGATGCCATGCCCTCTGACGCCA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp GGAACTGTTGGTTCATCAGGGCAGCCAGGGGAAGGCAGTCAAAGGCATCCATACCAGAGAAAAGTCCTTTaGGTGGTTGTCAGTAGTTTA +
Preference number: 4 (lower is better)
Translates to: GTVGSSGQPGEGSQRHPYQRKVL*VVVSSL
Trigger: TAAACTACTGACAACCACCCAAAGGACTTTTCTCTG...GTATGGATGCCTTTGACTGCCTTCCCCTGGCTGCCCTGATGAACCAACAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR TCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTTCCTGTCGAAGAATTaGTGCACCCTCTGTTATTAT +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQFLSKN*CTLCYY
Trigger: ATAATAACAGAGGGTGCATCAATTCTTCGACAGGAA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACATCTTCCAGGGGGTCTaGCCACAGGATATCACACAT +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYIFQGV*PQDITH
Trigger: ATGTGTGATATCCTGTGGTCAGACCCCCTGGAAGAT...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR GCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTTGCCGCTGTTGCTGCTaGCGCTGCCCCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSCRCCC*RCPCFS
Trigger: GGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCA...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACCAACTTGGGATCAATTaGCTTGGGCTCGGACATCTC +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYQLGIN*LGLGHL
Trigger: GAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTG...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACTCCGCTGGGGAGCATaGCAGTTGGGGTCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGLRWGA*QLGSSL
Trigger: AAGGCTTGACCCCAACTGGCATGCTCCCCAGCGGAG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTATTGCTGCTATTACTaGCATTGCTGTCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHYCCYY*HCCPCR
Trigger: ACGGCACGGACAGCAATGGCAGTAATAGCAGCAATA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTCTAGAAGTCCCCAATaGAGTAGGAAAACATGTTCA +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQSRSPQ*SRKTCS
Trigger: TGAACATGTTTTCCTACTGCATTGGGGACTTCTAGA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACAGAGGTAGCGAGTGTTaGCAGGAGATCCCCCGACTT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHRGSEC*QEIPRL
Trigger: AAGTCGGGGGATCTCCTGCCAACACTCGCTACCTCT...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCGGTACCCTGCATCTTaGGCTTCGTGGGCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYRYPAS*ASWARS
Trigger: ACTCCGAGCCCACGAAGCCCAAGATGCAGGGTACCG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACGGTACCCTGCATCTTaGGCTTCGTGGGCTCGGAGT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGRYPAS*ASWARS
Trigger: ACTCCGAGCCCACGAAGCCCAAGATGCAGGGTACCG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATGCACTGAGAACACTCTaGCCATTTTGCCTATTGCTC +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHALRTL*PFCLLL
Trigger: GAGCAATAGGCAAAATGGCCAGAGTGTTCTCAGTGC...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGCACTGAGAACACTCTaGCCATTTTGCCTATTGCTC +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQALRTL*PFCLLL
Trigger: GAGCAATAGGCAAAATGGCCAGAGTGTTCTCAGTGC...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATACTGAATCCAATTCCTaGCCCCCAGAGCAAATAAGC +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHTESNS*PPEQIS
Trigger: GCTTATTTGCTCTGGGGGCCAGGAATTGGATTCAGT...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGAACATCCATGAAATTTaGAAGCCAGTATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQNIHEI*KPVWMR
Trigger: CCTCATCCATACTGGCTTCCAAATTTCATGGATGTT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp ACCAAGGTACACAGAGAAAAGTCCTTTGGGTGGTTGTCAGTAGTTTACATTCCTAATCGGGGTCATCTGTaGAGCTTCAGTGACTGGCGC +
Preference number: 4 (lower is better)
Translates to: TKVHREKSFGWLSVVYIPNRGHL*SFSDWR
Trigger: GCGCCAGTCACTGAAGCTCCACAGATGACCCCGATT...AGGAATGTAAACTACTGACAACCACCCAAAGGACTTTTCTCTGTGTACCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR CCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTACTGCAGCAGTGACTaGCGCATCAATATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHYCSSD*RINIQQ
Trigger: TTGCTGGATATTGATGCGCCAGTCACTGCTGCAGTA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000512215.5
CDS-3UTR TCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACCTCTTCTCTGAGCACTaGGAACACTCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYLFSEH*EHSGHF
Trigger: AAAATGGCCAGAGTGTTCTCAGTGCTCAGAGAAGAG...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGAACATCCAACTGCTaGTATGCAGCAATCCCCATC +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYRTSNC*YAAIPI
Trigger: GATGGGGATTGCTGCATATCAGCAGTTGGATGTTCT...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATAATGATAGTGTAAACTaGATCCAATTCCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHNDSVN*IQFLAP
Trigger: GGGGGCCAGGAATTGGATTCAGTTTACACTATCATT...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR TCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTTCTCTTATCTGATTTaGGACACAAATCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQFSYLI*DTNPPR
Trigger: TCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGATCTTATGTTGTGGTaGAAATCCTTTGATAGCTTC +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQDLMLW*KSFDSF
Trigger: GAAGCTATCAAAGGATTTTCACCACAACATAAGATC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGTACATGCGGTACCCTaGATCTTGGGCTTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKVHAVP*ILGFVG
Trigger: GCCCACGAAGCCCAAGATGCAGGGTACCGCATGTAC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGTACATGCGGTACCCTaGATCTTGGGCTTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGVHAVP*ILGFVG
Trigger: GCCCACGAAGCCCAAGATGCAGGGTACCGCATGTAC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACGGCTTTTCCTGTACATaGGGTACCCTGCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHGFSCT*GTLHLG
Trigger: CCCAAGATGCAGGGTACCGCATGTACAGGAAAAGCC...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACCACCTCTTTCCGGGCTaGAGCTGTTGCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHHLFPG*SCCTIK
Trigger: TTTGATGGTGCAACAGCTGCAGCCCGGAAAGAGGTG...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATACACTCTGGCCATTTTaGCTATTGCTCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHTLWPF*LLLGSC
Trigger: ACAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGT...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGACACTCTGGCCATTTTaGCTATTGCTCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQTLWPF*LLLGSC
Trigger: ACAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAAGGGCATGGCATCTCTaGGAGGCGGCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKRAWHL*EAASSH
Trigger: ATGAGAGGATGCCGCCTCGCAGAGATGCCATGCCCT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAGGGCATGGCATCTCTaGGAGGCGGCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGRAWHL*EAASSH
Trigger: ATGAGAGGATGCCGCCTCGCAGAGATGCCATGCCCT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTATTGCTGCTATTACTaGCATTGCTGTCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYYCCYY*HCCPCR
Trigger: ACGGCACGGACAGCAATGGCAGTAATAGCAGCAATA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCCAGAAGATGGCATCTaGTCTTTAAACAGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHPEDGI*SLNRLL
Trigger: GAGAAGCCTGTTTAAAGAGCAGATGCCATCTTCTGG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACCGGTCGTCGACAACTTaGGATCAATTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHRSSTT*DQLPWA
Trigger: AGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCG...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACGGGGAGCATGCCAGTTaGGGTCAAGCCTTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYGEHAS*GQAFQR
Trigger: ACGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCC...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGGGGAGCATGCCAGTTaGGGTCAAGCCTTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKGEHAS*GQAFQR
Trigger: ACGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACAGAAAGTACTCCGCTaGGGAGCATGCCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGQKVLR*GACQLG
Trigger: CCCCAACTGGCATGCTCCCCAGCGGAGTACTTTCTG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACACTGAATCCAATTCCTaGCCCCCAGAGCAAATAAGC +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYTESNS*PPEQIS
Trigger: GCTTATTTGCTCTGGGGGCCAGGAATTGGATTCAGT...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTGGAGGTCTAGGCTCTaGGCTGGCTTTAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHWRSRL*AGFKVA
Trigger: AGCAACTTTAAAGCCAGCTCAGAGCCTAGACCTCCA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAATGATAGTGTAAACTaGATCCAATTCCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYNDSVN*IQFLAP
Trigger: GGGGGCCAGGAATTGGATTCAGTTTACACTATCATT...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATGACTCAGTGGAAGGATaGGAATTCTGTAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHDSVEG*EFCKFM
Trigger: CATGAACTTACAGAATTCTCATCCTTCCACTGAGTC...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATATCAAACACTTCTTTTaGTGTAAGCCGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHIKHFF*CKPVTW
Trigger: CCAAGTCACCGGCTTACAGCAAAAGAAGTGTTTGAT...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCCCTCCTTCATAAGATaGGCCTTTAAGATATCCACA +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHPSFIR*AFKIST
Trigger: TGTGGATATCTTAAAGGCGCATCTTATGAAGGAGGG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACGCGCTTTGCAGGGTTTaGTTCCCTCCAGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHALCRV*FPPEST
Trigger: AGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGC...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTCAACAGTAGCGCTTTaGAGGGTTTGCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHSTVAL*RVCFPP
Trigger: TGGAGGGAAGCAAACCCTGCAAAGCGCTACTGTTGA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGCGGGCTGCGCGTGTGTaGTGGTTATTTATTTATTTT +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQRAARV*WLFIYF
Trigger: AAAATAAATAAATAACCACCACACACGCGCAGCCCG...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACAGAGGTAGCGAGTGTTaGCAGGAGATCCCCCGACTT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYRGSEC*QEIPRL
Trigger: AAGTCGGGGGATCTCCTGCCAACACTCGCTACCTCT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR CCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTGGGGAGCATGCCAGTTaGGGTCAAGCCTTTCAGCGT +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLGEHAS*GQAFQR
Trigger: ACGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCC...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGAAGATAAGTGTTATATaGAAAGAAGGGCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQKISVI*KEGHSS
Trigger: GCTTGAATGCCCTTCTTTCCATATAACACTTATCTT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACCTTCAGCGGACTCAGTaGAAGGATGAGAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYLQRTQ*KDENSV
Trigger: TACAGAATTCTCATCCTTCCACTGAGTCCGCTGAAG...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTTCCTGTCGAAGAATTaGTGCACCCTCTGTTATTAT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHFLSKN*CTLCYY
Trigger: ATAATAACAGAGGGTGCATCAATTCTTCGACAGGAA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCGTGCCGTTAGTCTCTaGGGTGAGAGCCTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYRAVSL*GESLVD
Trigger: ATCAACAAGGCTCTCACCTCAGAGACTAACGGCACG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCACACTAAAGAAACCTaGGGTAAGCATAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHHTKET*GKHNLY
Trigger: GTACAGATTATGCTTACCTCAGGTTTCTTTAGTGTG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGCACACTAAAGAAACCTaGGGTAAGCATAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQHTKET*GKHNLY
Trigger: GTACAGATTATGCTTACCTCAGGTTTCTTTAGTGTG...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACCAGGCTTCTCTTATCTaGTTTGAGACACAAATCCAC +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYQASLI*FETQIH
Trigger: GTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTG...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTCAATACTGCAGCAGTaGCTGGCGCATCAATATCCA +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHSILQQ*LAHQYP
Trigger: TGGATATTGATGCGCCAGTCACTGCTGCAGTATTGA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512215.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACACACATAGGTCCATATaGAGGTGGTTCTTTGAATCG +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYTHRSI*RWFFES
Trigger: CGATTCAAAGAACCACCTGCATATGGACCTATGTGT...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGGCTTTTCCTGTACATaGGGTACCCTGCATCTTGGG +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGGFSCT*GTLHLG
Trigger: CCCAAGATGCAGGGTACCGCATGTACAGGAAAAGCC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACACCTCTTTCCGGGCTaGAGCTGTTGCACCATCAAA +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKHLFPG*SCCTIK
Trigger: TTTGATGGTGCAACAGCTGCAGCCCGGAAAGAGGTG...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTAGGGCATGGCATCTCTaGGAGGCGGCATCCTCTCAT +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSRAWHL*EAASSH
Trigger: ATGAGAGGATGCCGCCTCGCAGAGATGCCATGCCCT...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACATCCAACTGCTGATATaGAGCAATCCCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHIQLLI*SNPHHA
Trigger: GGCATGATGGGGATTGCTGCATATCAGCAGTTGGAT...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTGGGATCAATTGCCTTaGGCTCGGACATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYWDQLP*ARTSPA
Trigger: AGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCGGTCGTCGACAACTTaGGATCAATTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYRSSTT*DQLPWA
Trigger: AGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACGGTCGTCGACAACTTaGGATCAATTGCCTTGGGCT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGRSSTT*DQLPWA
Trigger: AGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACGTGACTTGGAGGAAATaGAACAGCTTTCACCACCCT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHVTWRK*NSFHHP
Trigger: AGGGTGGTGAAAGCTGTTCCATTTCCTCCAAGTCAC...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGAAAGTGAACAGGAAGTaGTCACTGAATATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQKVNRK*SLNIAA
Trigger: AGCAGCAATATTCAGTGACCACTTCCTGTTCACTTT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATAAAGTGAACAGGAAGTaGTCACTGAATATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHKVNRK*SLNIAA
Trigger: AGCAGCAATATTCAGTGACCACTTCCTGTTCACTTT...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGAACATCCATGAAATTTaGAAGCCAGTATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQNIHEI*KPVWMR
Trigger: CCTCATCCATACTGGCTTCCAAATTTCATGGATGTT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATGGAGGTCTAGGCTCTaGGCTGGCTTTAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKWRSRL*AGFKVA
Trigger: AGCAACTTTAAAGCCAGCTCAGAGCCTAGACCTCCA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTGGAGGTCTAGGCTCTaGGCTGGCTTTAAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYWRSRL*AGFKVA
Trigger: AGCAACTTTAAAGCCAGCTCAGAGCCTAGACCTCCA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTTCCTGTCGAAGAATTaGTGCACCCTCTGTTATTAT +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYFLSKN*CTLCYY
Trigger: ATAATAACAGAGGGTGCATCAATTCTTCGACAGGAA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTGTCCCCACAAACAGTaGCTGGCGCATCAATATCCA +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYCPHKQ*LAHQYP
Trigger: TGGATATTGATGCGCCAGTCACTGTTTGTGGGGACA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACATCTTCCAGGGGGTCTaGCCACAGGATATCACACAT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYIFQGV*PQDITH
Trigger: ATGTGTGATATCCTGTGGTCAGACCCCCTGGAAGAT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR TCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAATCTTCCAGGGGGTCTaGCCACAGGATATCACACAT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKIFQGV*PQDITH
Trigger: ATGTGTGATATCCTGTGGTCAGACCCCCTGGAAGAT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR TCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACGTAACTGTAGAAGTATaGACACCCCCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHVTVEV*TPPDCV
Trigger: AACACAGTCAGGGGGTGTTCATACTTCTACAGTTAC...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR TCA 90 bp ACCAAGGTACACAGAGAAAAGTCCTTTGGGTGGTTGTCAGTAGTTTACATTCCTGTAACTGTAGAAGTATaGACACCCCCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: TKVHREKSFGWLSVVYIPVTVEV*TPPDCV
Trigger: AACACAGTCAGGGGGTGTTCATACTTCTACAGTTAC...AGGAATGTAAACTACTGACAACCACCCAAAGGACTTTTCTCTGTGTACCTTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTCTCACTCTCTTCTCTaGGCACTGAGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYSHSLL*ALRTLW
Trigger: CCAGAGTGTTCTCAGTGCTCAGAGAAGAGAGTGAGA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACGATCTTATGTTGTGGTaGAAATCCTTTGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYDLMLW*KSFDSA
Trigger: AGCGCTATCAAAGGATTTTCACCACAACATAAGATC...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394853.8
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACAACTTGGGATCAATTaGCTTGGGCTCGGACATCTC +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKQLGIN*LGLGHL
Trigger: GAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTG...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCAACTTGGGATCAATTaGCTTGGGCTCGGACATCTC +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYQLGIN*LGLGHL
Trigger: GAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTGTTATTATTCTCAATaGAACACTCTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHCYYSQ*NTLFQP
Trigger: AGGCTGGAAGAGAGTGTTGCATTGAGAATAATAACA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGGAGACAAACCACCATaGACACACAGGAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKGDKPP*THRNCW
Trigger: CCAACAGTTCCTGTGTGTGCATGGTGGTTTGTCTCC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGCGCTTTGCAGGGTTTaGTTCCCTCCAGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKALCRV*FPPEST
Trigger: AGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGCGCTTTGCAGGGTTTaGTTCCCTCCAGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGALCRV*FPPEST
Trigger: AGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACCTTTGATAGCGCTTTaGAGGGTTTGCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKPLIAL*RVCFPP
Trigger: TGGAGGGAAGCAAACCCTGCAAAGCGCTATCAAAGG...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394853.8
CDS-3UTR GCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGATTGTTACAAGTGCATaGTTTGATTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQIVTSA*FDCQHV
Trigger: GACATGTTGGCAATCAAAGCATGCACTTGTAACAAT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACCCTTGGGATAGTCTTTaGCAGACTGTATCGAGAACA +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHPWDSL*QTVSRT
Trigger: TGTTCTCGATACAGTCTGGCAAAGACTATCCCAAGG...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATCAACAGTAGCGCTTTaGAGGGTTTGCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKSTVAL*RVCFPP
Trigger: TGGAGGGAAGCAAACCCTGCAAAGCGCTACTGTTGA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTTGGGATCAATTGCCTTaGGCTCGGACATCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLWDQLP*ARTSPA
Trigger: AGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCA...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTAGAGGTAGCGAGTGTTaGCAGGAGATCCCCCGACTT +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSRGSEC*QEIPRL
Trigger: AAGTCGGGGGATCTCCTGCCAACACTCGCTACCTCT...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394854.8
CDS-3UTR CCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAACATCCATGAAATTTaGAAGCCAGTATGGATGAGG +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYNIHEI*KPVWMR
Trigger: CCTCATCCATACTGGCTTCCAAATTTCATGGATGTT...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACGCACACATTCAATACTaGAGTACCCTCTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHAHIQY*STLCQH
Trigger: ATGTTGACAGAGGGTACTTCAGTATTGAATGTGTGC...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR TCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACTCTTCTCTGAGCACTaGGAACACTCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGLFSEH*EHSGHF
Trigger: AAAATGGCCAGAGTGTTCTCAGTGCTCAGAGAAGAG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACTCTTCTCTGAGCACTaGGAACACTCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKLFSEH*EHSGHF
Trigger: AAAATGGCCAGAGTGTTCTCAGTGCTCAGAGAAGAG...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR TCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTTCTCACTCTCTTCTCTaGGCACTGAGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLSHSLL*ALRTLW
Trigger: CCAGAGTGTTCTCAGTGCTCAGAGAAGAGAGTGAGA...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTCGTGCCGTTAGTCTCTaGGGTGAGAGCCTTGTTGAT +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSRAVSL*GESLVD
Trigger: ATCAACAAGGCTCTCACCTCAGAGACTAACGGCACG...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACGGCATCCAATACAACTaGAACAACCTGATAACAAAT +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYGIQYN*NNLITN
Trigger: ATTTGTTATCAGGTTGTTTCAGTTGTATTGGATGCC...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp ACCAAGGTACACAGAGAAAAGTCCTTTGGGTGGTTGTCAGTAGTTTACATTCCTCCTTTCTGTGTCATTTaGAAGCCATCCGTTTTTACC +
Preference number: 4 (lower is better)
Translates to: TKVHREKSFGWLSVVYIPPFCVI*KPSVFT
Trigger: GGTAAAAACGGATGGCTTTCAAATGACACAGAAAGG...AGGAATGTAAACTACTGACAACCACCCAAAGGACTTTTCTCTGTGTACCTTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR GCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTCAACTTGGGATCAATTaGCTTGGGCTCGGACATCTC +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLQLGIN*LGLGHL
Trigger: GAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTG...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTGGAGACAAACCACCATaGACACACAGGAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLGDKPP*THRNCW
Trigger: CCAACAGTTCCTGTGTGTGCATGGTGGTTTGTCTCC...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR GCA 90 bp ATAGGTCCATATGCAGGTGGTTCTTTGAATCGGTCTAATTTTCTGATATCATCTGGAGACAAACCACCATaGACACACAGGAACTGTTGG +
Preference number: 4 (lower is better)
Translates to: IGPYAGGSLNRSNFLISSGDKPP*THRNCW
Trigger: CCAACAGTTCCTGTGTGTGCATGGTGGTTTGTCTCC...AGATGATATCAGAAAATTAGACCGATTCAAAGAACCACCTGCATATGGACCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATATTGCTGCTATTACTaGCATTGCTGTCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKYCCYY*HCCPCR
Trigger: ACGGCACGGACAGCAATGGCAGTAATAGCAGCAATA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATATTGCTGCTATTACTaGCATTGCTGTCCGTGCCGT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGYCCYY*HCCPCR
Trigger: ACGGCACGGACAGCAATGGCAGTAATAGCAGCAATA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCTAACCATCTACATGTaGATTGACAAGCTTATGTTA +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHLTIYM*IDKLML
Trigger: TAACATAAGCTTGTCAATGCACATGTAGATGGTTAG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACATTGTTACAAGTGCATaGTTTGATTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYIVTSA*FDCQHV
Trigger: GACATGTTGGCAATCAAAGCATGCACTTGTAACAAT...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGTTTCTATGCCATAGTTaGCTCAGCACAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQFLCHS*LSTICK
Trigger: TTTACAAATTGTGCTGAGGCAACTATGGCATAGAAA...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATAAATGTTTATTTCTATaGCATAGTTGCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHKCLFL*HSCLST
Trigger: TGTGCTGAGGCAACTATGGCATAGAAATAAACATTT...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACGTGACTTGGAGGAAATaGAACAGCTTTCACCACCCT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYVTWRK*NSFHHP
Trigger: AGGGTGGTGAAAGCTGTTCCATTTCCTCCAAGTCAC...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGTGACTTGGAGGAAATaGAACAGCTTTCACCACCCT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKVTWRK*NSFHHP
Trigger: AGGGTGGTGAAAGCTGTTCCATTTCCTCCAAGTCAC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCCCACAAACAGTGACTaGCGCATCAATATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYPTNSD*RINIQQ
Trigger: TTGCTGGATATTGATGCGCCAGTCACTGTTTGTGGG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGCACTGAGAACACTCTaGCCATTTTGCCTATTGCTC +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGALRTL*PFCLLL
Trigger: GAGCAATAGGCAAAATGGCCAGAGTGTTCTCAGTGC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACACTGAATCCAATTCCTaGCCCCCAGAGCAAATAAGC +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYTESNS*PPEQIS
Trigger: GCTTATTTGCTCTGGGGGCCAGGAATTGGATTCAGT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACTAGGAAGAAGCCTGTaGAAATCAGCCTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGLGRSL*KSACDV
Trigger: CACATCACAGGCTGATTTCCACAGGCTTCTTCCTAG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCTAGGAAGAAGCCTGTaGAAATCAGCCTGTGATGTG +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYLGRSL*KSACDV
Trigger: CACATCACAGGCTGATTTCCACAGGCTTCTTCCTAG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGAGAACATCTTTGTTTaGGTATGCTATATCGCTAAT +
Preference number: 4 (lower is better)
Translates to: SSICQTTKRITVPYRPIQENIFV*VCYIAN
Trigger: ATTAGCGATATAGCATACCCAAACAAAGATGTTCTC...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTTTTGCTGTAAGCCGGTaGCTTGGAGGAAATGGAACA +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLFAVSR*LGGNGT
Trigger: TGTTCCATTTCCTCCAAGTCACCGGCTTACAGCAAA...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTTGTCCCCACAAACAGTaGCTGGCGCATCAATATCCA +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSCPHKQ*LAHQYP
Trigger: TGGATATTGATGCGCCAGTCACTGTTTGTGGGGACA...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394854.8
CDS-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACGTAACTGTAGAAGTATaGACACCCCCTGACTGTGTT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYVTVEV*TPPDCV
Trigger: AACACAGTCAGGGGGTGTTCATACTTCTACAGTTAC...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR TCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTCTCTTCTCTGAGCACTaGGAACACTCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLLFSEH*EHSGHF
Trigger: AAAATGGCCAGAGTGTTCTCAGTGCTCAGAGAAGAG...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTTCTCACTCTCTTCTCTaGGCACTGAGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSSHSLL*ALRTLW
Trigger: CCAGAGTGTTCTCAGTGCTCAGAGAAGAGAGTGAGA...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp ATAGGTCCATATGCAGGTGGTTCTTTGAATCGGTCTAATTTTCTGATATCATCTCTTCCCTGCCATGTGTaGAATCTCCTTTCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: IGPYAGGSLNRSNFLISSLPCHV*NLLSVS
Trigger: TGACACAGAAAGGAGATTTCACACATGGCAGGGAAG...AGATGATATCAGAAAATTAGACCGATTCAAAGAACCACCTGCATATGGACCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR TCA 90 bp AAGTCCTTTGGGTGGTTGTCAGTAGTTTACATTCCTTCCCTGCCATGTGTGAAAAATTACCTTCAATACTaGAGTACCCTCTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: KSFGWLSVVYIPSLPCVKNYLQY*STLCQH
Trigger: ATGTTGACAGAGGGTACTTCAGTATTGAAGGTAATT...TTTCACACATGGCAGGGAAGGAATGTAAACTACTGACAACCACCCAAAGGACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAACACTCTGGCCATTTTaGCTATTGCTCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGTLWPF*LLLGSC
Trigger: ACAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAACACTCTGGCCATTTTaGCTATTGCTCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKTLWPF*LLLGSC
Trigger: ACAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTGCGCTTTGCAGGGTTTaGTTCCCTCCAGAAAGTACT +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSALCRV*FPPEST
Trigger: AGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGC...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTATCCAACTGCTGATATaGAGCAATCCCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLIQLLI*SNPHHA
Trigger: GGCATGATGGGGATTGCTGCATATCAGCAGTTGGAT...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCCTTGGGATAGTCTTTaGCAGACTGTATCGAGAACA +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYPWDSL*QTVSRT
Trigger: TGTTCTCGATACAGTCTGGCAAAGACTATCCCAAGG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATGTAAGCCGGTGACTTaGAGGAAATGGAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGCKPVT*RKWNSF
Trigger: AAAGCTGTTCCATTTCCTCCAAGTCACCGGCTTACA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACTTCAGCGGACTCAGTaGAAGGATGAGAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKLQRTQ*KDENSV
Trigger: TACAGAATTCTCATCCTTCCACTGAGTCCGCTGAAG...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACTTCAGCGGACTCAGTaGAAGGATGAGAATTCTGTA +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGLQRTQ*KDENSV
Trigger: TACAGAATTCTCATCCTTCCACTGAGTCCGCTGAAG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGAGGAAGCCAGAAGATaGCATCTGCTCTTTAAACAG +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGEEARR*HLLFKQ
Trigger: CTGTTTAAAGAGCAGATGCCATCTTCTGGCTTCCTC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACGCACACATTCAATACTaGAGTACCCTCTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYAHIQY*STLCQH
Trigger: ATGTTGACAGAGGGTACTTCAGTATTGAATGTGTGC...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR TCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGCACACATTCAATACTaGAGTACCCTCTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGAHIQY*STLCQH
Trigger: ATGTTGACAGAGGGTACTTCAGTATTGAATGTGTGC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR TCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTCTCTTCTCTGAGCACTaGGAACACTCTGGCCATTTT +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSLFSEH*EHSGHF
Trigger: AAAATGGCCAGAGTGTTCTCAGTGCTCAGAGAAGAG...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTACAAGTGCATGCTTTaGTTGCCAACATGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYYKCML*LPTCQK
Trigger: CTTCTGACATGTTGGCAATCAAAGCATGCACTTGTA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATACAAGTGCATGCTTTaGTTGCCAACATGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKYKCML*LPTCQK
Trigger: CTTCTGACATGTTGGCAATCAAAGCATGCACTTGTA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTCTCTTATCTGATTTaGGACACAAATCCACCAAGA +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHFSYLI*DTNPPR
Trigger: TCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACAGGCTTCTCTTATCTaGTTTGAGACACAAATCCAC +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKQASLI*FETQIH
Trigger: GTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTG...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACAGGCTTCTCTTATCTaGTTTGAGACACAAATCCAC +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGQASLI*FETQIH
Trigger: GTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACATCAAACACTTCTTTTaGTGTAAGCCGGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYIKHFF*CKPVTW
Trigger: CCAAGTCACCGGCTTACAGCAAAAGAAGTGTTTGAT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCCCTCCTTCATAAGATaGGCCTTTAAGATATCCACA +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYPSFIR*AFKIST
Trigger: TGTGGATATCTTAAAGGCGCATCTTATGAAGGAGGG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTGTTATTATTCTCAATaGAACACTCTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHCYYSQ*NTLFQP
Trigger: AGGCTGGAAGAGAGTGTTGCATTGAGAATAATAACA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAACACATAGGTCCATATaGAGGTGGTTCTTTGAATCG +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKTHRSI*RWFFES
Trigger: CGATTCAAAGAACCACCTGCATATGGACCTATGTGT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR GCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTATCCAACTGCTGATATaGAGCAATCCCCATCATGCC +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSIQLLI*SNPHHA
Trigger: GGCATGATGGGGATTGCTGCATATCAGCAGTTGGAT...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTTGTAAGCCGGTGACTTaGAGGAAATGGAACAGCTTT +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLCKPVT*RKWNSF
Trigger: AAAGCTGTTCCATTTCCTCCAAGTCACCGGCTTACA...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTCCCACAAACAGTGACTaGCGCATCAATATCCAGCAA +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSPTNSD*RINIQQ
Trigger: TTGCTGGATATTGATGCGCCAGTCACTGTTTGTGGG...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394854.8
CDS-3UTR TCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTGCACACATTCAATACTaGAGTACCCTCTGTCAACAT +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLAHIQY*STLCQH
Trigger: ATGTTGACAGAGGGTACTTCAGTATTGAATGTGTGC...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR TCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGATCTTATGTTGTGGTaGAAATCCTTTGATAGCGCT +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGDLMLW*KSFDSA
Trigger: AGCGCTATCAAAGGATTTTCACCACAACATAAGATC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394853.8
CDS-3UTR TCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTAATGATAGTGTAAACTaGATCCAATTCCTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSNDSVN*IQFLAP
Trigger: GGGGGCCAGGAATTGGATTCAGTTTACACTATCATT...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTGACTCAGTGGAAGGATaGGAATTCTGTAAGTTCATG +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLDSVEG*EFCKFM
Trigger: CATGAACTTACAGAATTCTCATCCTTCCACTGAGTC...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTACACTCTGGCCATTTTaGCTATTGCTCGGATCTTGT +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSTLWPF*LLLGSC
Trigger: ACAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGT...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATCTAGAAGTCCCCAATaGAGTAGGAAAACATGTTCA +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKSRSPQ*SRKTCS
Trigger: TGAACATGTTTTCCTACTGCATTGGGGACTTCTAGA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACATCTTTGTTTGGGTATaGTATATCGCTAATTGCCAT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHIFVWV*YIANCH
Trigger: ATGGCAATTAGCGATATAGCATACCCAAACAAAGAT...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACAAAGTGAACAGGAAGTaGTCACTGAATATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYKVNRK*SLNIAA
Trigger: AGCAGCAATATTCAGTGACCACTTCCTGTTCACTTT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTGAGGAAGCCAGAAGATaGCATCTGCTCTTTAAACAG +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSEEARR*HLLFKQ
Trigger: CTGTTTAAAGAGCAGATGCCATCTTCTGGCTTCCTC...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACGAGAACATCTTTGTTTaGGTATGCTATATCGCTAAT +
Preference number: 4 (lower is better)
Translates to: QKSNYKGKALGCSELLGHENIFV*VCYIAN
Trigger: ATTAGCGATATAGCATACCCAAACAAAGATGTTCTC...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
3UTR CAA 72 bp GGCATCTGCTCTTTAAACAGGCTTCTCTTATCTGATTaGAGACACAAATCCACCAAGATTCTTTCTTACAGT +
Preference number: 4 (lower is better)
Translates to: GICSLNRLLLSD*RHKSTKILSYS
Trigger: ACTGTAAGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAAAGAGCAGATGCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTCACACTAAAGAAACCTaGGGTAAGCATAATCTGTAC +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLHTKET*GKHNLY
Trigger: GTACAGATTATGCTTACCTCAGGTTTCTTTAGTGTG...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGGCATCCAATACAACTaGAACAACCTGATAACAAAT +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKGIQYN*NNLITN
Trigger: ATTTGTTATCAGGTTGTTTCAGTTGTATTGGATGCC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR TCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGATCTTATGTTGTGGTaGAAATCCTTTGATAGCTTC +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKDLMLW*KSFDSF
Trigger: GAAGCTATCAAAGGATTTTCACCACAACATAAGATC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR GCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTACACATAGGTCCATATaGAGGTGGTTCTTTGAATCG +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSTHRSI*RWFFES
Trigger: CGATTCAAAGAACCACCTGCATATGGACCTATGTGT...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394854.8
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAATTGTTACAAGTGCATaGTTTGATTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGIVTSA*FDCQHV
Trigger: GACATGTTGGCAATCAAAGCATGCACTTGTAACAAT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTCGGGCTGCGCGTGTGTaGTGGTTATTTATTTATTTT +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSRAARV*WLFIYF
Trigger: AAAATAAATAAATAACCACCACACACGCGCAGCCCG...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTAAAGTGAACAGGAAGTaGTCACTGAATATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLKVNRK*SLNIAA
Trigger: AGCAGCAATATTCAGTGACCACTTCCTGTTCACTTT...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
3UTR CAA 72 bp AGGATATCACACATAGGTCCATATGCAGGTGGTTCTTaGAATCGGTCTAATTTTCTGATATCATCTAAAGTG +
Preference number: 4 (lower is better)
Translates to: RISHIGPYAGGS*NRSNFLISSKV
Trigger: CACTTTAGATGATATCAGAAAATTAGACCGATTCAAAGAACCACCTGCATATGGACCTATGTGTGATATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR GCA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCTAACCATCTACATGTaGATTGACAAGCTTATGTTA +
Preference number: 4 (lower is better)
Translates to: SNYKGKALGCSELLGHLYLTIYM*IDKLML
Trigger: TAACATAAGCTTGTCAATGCACATGTAGATGGTTAG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACTAACCATCTACATGTaGATTGACAAGCTTATGTTA +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGLTIYM*IDKLML
Trigger: TAACATAAGCTTGTCAATGCACATGTAGATGGTTAG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATTTCTATGCCATAGTTaGCTCAGCACAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGFLCHS*LSTICK
Trigger: TTTACAAATTGTGCTGAGGCAACTATGGCATAGAAA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATTTCTATGCCATAGTTaGCTCAGCACAATTTGTAAA +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKFLCHS*LSTICK
Trigger: TTTACAAATTGTGCTGAGGCAACTATGGCATAGAAA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAATGTTTATTTCTATaGCATAGTTGCCTCAGCACA +
Preference number: 4 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGKCLFL*HSCLST
Trigger: TGTGCTGAGGCAACTATGGCATAGAAATAAACATTT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAAAGATAAGTGTTATATaGAAAGAAGGGCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKKISVI*KEGHSS
Trigger: GCTTGAATGCCCTTCTTTCCATATAACACTTATCTT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTTGTTATTATTCTCAATaGAACACTCTCTTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSCYYSQ*NTLFQP
Trigger: AGGCTGGAAGAGAGTGTTGCATTGAGAATAATAACA...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR GCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTCTAACCATCTACATGTaGATTGACAAGCTTATGTTA +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLLTIYM*IDKLML
Trigger: TAACATAAGCTTGTCAATGCACATGTAGATGGTTAG...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CCA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTAAGATAAGTGTTATATaGAAAGAAGGGCATTCAAGC +
Preference number: 4 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLKISVI*KEGHSS
Trigger: GCTTGAATGCCCTTCTTTCCATATAACACTTATCTT...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp GCCGCACCTTGGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTGCTaGCGCTGCTGCTGCCGCTGCCGCTGTTGCTGCTGCCGCTGCCCC +
Preference number: 5 (lower is better)
Translates to: AAPWRPRRRRGGRRC*RCCCRCRCCCCRCP
Trigger: GGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTCCGCCGCCGGGGACGCCAAGGTGCGGC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp CTGCTGCCGCTGCCCCTGCTTCTCCACACAGAGCGCCGCCGCTGGTaGCGCGGCCGCCGGAGACGTCCCGCCGCCGCGATCGCCCGCGCT +
Preference number: 5 (lower is better)
Translates to: LLPLPLLLHTERRRW*RGRRRRPAAAIARA
Trigger: AGCGCGGGCGATCGCGGCGGCGGGACGTCTCCGGCGGCCGCGGCACCAGCGGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp CCAGCCGCACCTTGGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTaGTGCCGCTGCTGCTGCCGCTGCCGCTGTTGCTGCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: PAAPWRPRRRRGGRR*CRCCCRCRCCCCRC
Trigger: GCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTCCGCCGCCGGGGACGCCAAGGTGCGGCTGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp CGCGTCCCTCCTCCGCCGCCGCCGCCTTCACTCCTCCTCCGCCGCTaGCGCCAGCCCCGCCGACTCGCTCCGGGCTGCGCGTGTGTGGTG +
Preference number: 5 (lower is better)
Translates to: RVPPPPPPPSLLLRR*RQPRRLAPGCACVV
Trigger: CACCACACACGCGCAGCCCGGAGCGAGTCGGCGGGGCTGGCGGCAGCGGCGGAGGAGGAGTGAAGGCGGCGGCGGCGGAGGAGGGACGCG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp GGCCGCCGGAGACGTCCCGCCGCCGCGATCGCCCGCGCTCGCCTCTaGCTCCCCGCGCCGCTCCTCCACTCACCAAGGCACAGCCGCCGA +
Preference number: 5 (lower is better)
Translates to: GRRRRPAAAIARARL*LPAPLLHSPRHSRR
Trigger: TCGGCGGCTGTGCCTTGGTGAGTGGAGGAGCGGCGCGGGGAGGCAGAGGCGAGCGCGGGCGATCGCGGCGGCGGGACGTCTCCGGCGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394854.8
CDS GCA 90 bp TGGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTGCTGCCGCTGCTaGTGCCGCTGCCGCTGTTGCTGCTGCCGCTGCCCCTGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: WRPRRRRGGRRCCRC*CRCRCCCCRCPCFS
Trigger: GGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTCCGCCGCCGGGGACGCCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp CCTTGGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTGCTGCCGCTaGTGCTGCCGCTGCCGCTGTTGCTGCTGCCGCTGCCCCTGCTTC +
Preference number: 5 (lower is better)
Translates to: PWRPRRRRGGRRCCR*CCRCRCCCCRCPCF
Trigger: GAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTCCGCCGCCGGGGACGCCAAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp CGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTGCTGCCGCTGCTGCTaGCGCTGCCGCTGTTGCTGCTGCCGCTGCCCCTGCTTCTCCACA +
Preference number: 5 (lower is better)
Translates to: RPRRRRGGRRCCRCC*RCRCCCCRCPCFST
Trigger: TGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTCCGCCGCCGGGGACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp CGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTTGCTGCTGCCGCTaGCCCTGCTTCTCCACACAGAGCGCCGCCGCTGGTGCCGCGGCC +
Preference number: 5 (lower is better)
Translates to: RCCRCCCRCRCCCCR*PCFSTQSAAAGAAA
Trigger: GGCCGCGGCACCAGCGGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp GGCCGCCGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTTGCTGCTaGCGCTGCCCCTGCTTCTCCACACAGAGCGCCGCCGCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: GRRCCRCCCRCRCCC*RCPCFSTQSAAAGA
Trigger: GGCACCAGCGGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp GGCGGCCGCCGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTTGCTaGTGCCGCTGCCCCTGCTTCTCCACACAGAGCGCCGCCGCTGGT +
Preference number: 5 (lower is better)
Translates to: GGRRCCRCCCRCRCC*CRCPCFSTQSAAAG
Trigger: ACCAGCGGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp CGGCGGCGGAGAGGCGGCCGCCGCTGCTGCCGCTGCTGCTGCCGCTaGCGCTGTTGCTGCTGCCGCTGCCCCTGCTTCTCCACACAGAGC +
Preference number: 5 (lower is better)
Translates to: RRRRGGRRCCRCCCR*RCCCCRCPCFSTQS
Trigger: GCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTCCGCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp AGAGGCGGCCGCCGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTTaGTGCTGCCGCTGCCCCTGCTTCTCCACACAGAGCGCCGCCGCT +
Preference number: 5 (lower is better)
Translates to: RGGRRCCRCCCRCRC*CCRCPCFSTQSAAA
Trigger: AGCGGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp TCTCCAGCTGCCGGAGGACAGCGACGCGCTGCTCGTCCGTCCGACTaGACACCCCGACCGGACCGGCGGGCCAGACACTCAACGCCGCCG +
Preference number: 5 (lower is better)
Translates to: SPAAGGQRRAARPSD*TPRPDRRARHSTPP
Trigger: CGGCGGCGTTGAGTGTCTGGCCCGCCGGTCCGGTCGGGGTGTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCTCCGGCAGCTGGAGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp GCCTTGGGCTCGGACATCTCCAGCTGCCGGAGGACAGCGACGCGCTaGTCGTCCGTCCGACTGCACACCCCGACCGGACCGGCGGGCCAG +
Preference number: 5 (lower is better)
Translates to: ALGSDISSCRRTATR*SSVRLHTPTGPAGQ
Trigger: CTGGCCCGCCGGTCCGGTCGGGGTGTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS CCA 90 bp CACACACGAGCACCCACCCCGGCACGGAGACCCAGCACCGCGGAATaGAGCCCCACGCGCGCACACACGGCCAGGATTAAGACCGATCAC +
Preference number: 5 (lower is better)
Translates to: HTRAPTPARRPSTAE*SPTRAHTARIKTDH
Trigger: GTGATCGGTCTTAATCCTGGCCGTGTGTGCGCGCGTGGGGCTCCATTCCGCGGTGCTGGGTCTCCGTGCCGGGGTGGGTGCTCGTGTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS TCA 90 bp CCGCCGCCGCCGCGCTGCAAACCGCTCGGCTGGAGGTCTAGGCTCTaGGCTGGCTTTAAAGTTGCTGCCTTTTCCGCGCGTCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PPPPRCKPLGWRSRL*AGFKVAAFSARPSS
Trigger: GGAGGAGGGACGCGCGGAAAAGGCAGCAACTTTAAAGCCAGCTCAGAGCCTAGACCTCCAGCCGAGCGGTTTGCAGCGCGGCGGCGGCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp GTCGACAACTTGGGATCAATTGCCTTGGGCTCGGACATCTCCAGCTaGCGGAGGACAGCGACGCGCTGCTCGTCCGTCCGACTGCACACC +
Preference number: 5 (lower is better)
Translates to: VDNLGSIALGSDISS*RRTATRCSSVRLHT
Trigger: GGTGTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS CCA 90 bp CTTTCACCACCCTGTCGGTCGTCGACAACTTGGGATCAATTGCCTTaGGCTCGGACATCTCCAGCTGCCGGAGGACAGCGACGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: LSPPCRSSTTWDQLP*ARTSPAAGGQRRAA
Trigger: AGCAGCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS GCA 90 bp AACAGCTTTCACCACCCTGTCGGTCGTCGACAACTTGGGATCAATTaGCTTGGGCTCGGACATCTCCAGCTGCCGGAGGACAGCGACGCG +
Preference number: 5 (lower is better)
Translates to: NSFHHPVGRRQLGIN*LGLGHLQLPEDSDA
Trigger: CGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp ACAAACTTTCACCACCCTGTCGGTCGTCGACAACTTGGGATCAATTaGCTTGGGCTCGGACATCTCCAGCTGCCGGAGGACAGCGACGCG +
Preference number: 5 (lower is better)
Translates to: TNFHHPVGRRQLGIN*LGLGHLQLPEDSDA
Trigger: CGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGTTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507176.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGCGGTACCCTGCATCTaGGGCTTCGTGGGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQAVPCI*GFVGSE
Trigger: CTCCGAGCCCACGAAGCCCAAGATGCAGGGTACCGC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CAA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAGAGCTGGCTTTAAAGTaGCTGCCTTTTCCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEELALK*LPFPRV
Trigger: GACGCGCGGAAAAGGCAGCAACTTTAAAGCCAGCTC...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAATCGGTCGTCGACAACTaGGGATCAATTGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVESVVDN*GSIALG
Trigger: GCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGA...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS CCA 90 bp GAATGTCCCCACAAACTTTCACCACCCTGTCGGTCGTCGACAACTTaGGATCAATTGCCTTGGGCTCGGACATCTCCAGCTGCCGGAGGA +
Preference number: 5 (lower is better)
Translates to: ECPHKLSPPCRSSTT*DQLPWARTSPAAGG
Trigger: TCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGTTTGTGGGGACATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507176.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTGGGGAGCATGCCAGTaGGGGTCAAGCCTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQWGACQ*GSSLSA
Trigger: CGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCCA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAAGCGCTTTGCAGGGTTaGCTTCCCTCCAGAAAGTAC +
Preference number: 5 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVESALQG*LPSRKY
Trigger: GTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGCT...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAGAGGTGAGAGCCTTGTaGATGGAGTTAAGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVEEVRAL*MELRLA
Trigger: CGCCAACCTTAACTCCATCAACAAGGCTCTCACCTC...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS CCA 90 bp CACAATGACAAAGAGTCATCATCTCAGAGTCCCCTGGCCTGCTCCTaGTGCATCACCAGCCTCATCTGTATTCCCCACGGGAAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: HNDKESSSQSPLACS*CITSLICIPHGKQQ
Trigger: CTGCTGCTTCCCGTGGGGAATACAGATGAGGCTGGTGATGCACCAGGAGCAGGCCAGGGGACTCTGAGATGATGACTCTTTGTCATTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510292.1
CDS-3UTR CAA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAAACAACTTGGGATCAATaGCCTTGGGCTCGGACATCT +
Preference number: 5 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVETTWDQ*PWARTS
Trigger: AGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGT...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTCCGGGCTGCAGCTGTaGCACCATCAAATCCATCTT +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQSGLQL*HHQIHL
Trigger: AAGATGGATTTGATGGTGCAACAGCTGCAGCCCGGA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTGGGGAGCATGCCAGTaGGGGTCAAGCCTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHWGACQ*GSSLSA
Trigger: CGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCCA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGAGCGCTTTGCAGGGTTaGCTTCCCTCCAGAAAGTAC +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQSALQG*LPSRKY
Trigger: GTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGCT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAATGTGGTGAAAATCCTTaGATAGCGCTTTGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVECGENP*IALCRV
Trigger: AACCCTGCAAAGCGCTATCAAAGGATTTTCACCACA...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000323055.10
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGATTCGGTCTAAGCCCTaGGCTTCCTCGAAGCTAGTG +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQIRSKP*ASSKLV
Trigger: CACTAGCTTCGAGGAAGCCAAGGGCTTAGACCGAAT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGAGGTGAGAGCCTTGTaGATGGAGTTAAGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQEVRAL*MELRLA
Trigger: CGCCAACCTTAACTCCATCAACAAGGCTCTCACCTC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp GGAACTGTTGGTTCATCAGGGCAGCCAGGGGAAGGCAGTCAAAGGCATCCATACCCATCCGTTTTTACCTaGGTGTGTGAATCGGGGTCA +
Preference number: 5 (lower is better)
Translates to: GTVGSSGQPGEGSQRHPYPSVFT*VCESGS
Trigger: TGACCCCGATTCACACACCAAGGTAAAAACGGATGG...GTATGGATGCCTTTGACTGCCTTCCCCTGGCTGCCCTGATGAACCAACAGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS GCA 90 bp ATTATTCACAATGACAAAGAGTCATCATCTCAGAGTCCCCTGGCCTaGTCCTGGTGCATCACCAGCCTCATCTGTATTCCCCACGGGAAG +
Preference number: 5 (lower is better)
Translates to: IIHNDKESSSQSPLA*SWCITSLICIPHGK
Trigger: CTTCCCGTGGGGAATACAGATGAGGCTGGTGATGCACCAGGAGCAGGCCAGGGGACTCTGAGATGATGACTCTTTGTCATTGTGAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510292.1
CDS-3UTR CAA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGTTGGGATCAATTGCCTaGGGCTCGGACATCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SSICQTTKRITVPYRPIQLGSIA*GSDISS
Trigger: GCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAA...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGTCGGTCGTCGACAACTaGGGATCAATTGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SSICQTTKRITVPYRPIQSVVDN*GSIALG
Trigger: GCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGA...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGAACACTCTGGCCATTTaGCCTATTGCTCGGATCTTG +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQNTLAI*PIARIL
Trigger: CAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGTT...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp GGAAGTAGGCACCACCCCTCAGATCACGAGGCCCCTAGGAAGAAGCCTGTGGAACTTCTCTTATCTGATTaGAGACACAAATCCACCAAG +
Preference number: 5 (lower is better)
Translates to: GSRHHPSDHEAPRKKPVELLLSD*RHKSTK
Trigger: CTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAG...TTCCACAGGCTTCTTCCTAGGGGCCTCGTGATCTGAGGGGTGGTGCCTACTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS TCA 90 bp AATATTGCTGCTATTACTGCCATTGCTGTCCGTGCCGTTAGTCTCTaGGGTGAGAGCCTTGTTGATGGAGTTAAGGTTGGCGTCAGAGGG +
Preference number: 5 (lower is better)
Translates to: NIAAITAIAVRAVSL*GESLVDGVKVGVRG
Trigger: CCCTCTGACGCCAACCTTAACTCCATCAACAAGGCTCTCACCTCAGAGACTAACGGCACGGACAGCAATGGCAGTAATAGCAGCAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CCA 90 bp AGAGAATTATTCACAATGACAAAGAGTCATCATCTCAGAGTCCCCTaGCCTGCTCCTGGTGCATCACCAGCCTCATCTGTATTCCCCACG +
Preference number: 5 (lower is better)
Translates to: RELFTMTKSHHLRVP*PAPGASPASSVFPT
Trigger: CGTGGGGAATACAGATGAGGCTGGTGATGCACCAGGAGCAGGCCAGGGGACTCTGAGATGATGACTCTTTGTCATTGTGAATAATTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510292.1
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTCGGTCGTCGACAACTaGGGATCAATTGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYSVVDN*GSIALG
Trigger: GCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGCGGTACCCTGCATCTaGGGCTTCGTGGGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGAVPCI*GFVGSE
Trigger: CTCCGAGCCCACGAAGCCCAAGATGCAGGGTACCGC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGCGGTACCCTGCATCTaGGGCTTCGTGGGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKAVPCI*GFVGSE
Trigger: CTCCGAGCCCACGAAGCCCAAGATGCAGGGTACCGC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGCCTATTGCTCGGATCTaGTTCCTTATCACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQPIARI*FLITSF
Trigger: GAAAGAGGTGATAAGGAACAAGATCCGAGCAATAGG...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTGTGGTGAAAATCCTTaGATAGCGCTTTGCAGGGTT +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQCGENP*IALCRV
Trigger: AACCCTGCAAAGCGCTATCAAAGGATTTTCACCACA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394853.8
CDS-3UTR CAA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGATTCGGTCTAAGCCCTaGGCTTCCTCGAAGCTAGTG +
Preference number: 5 (lower is better)
Translates to: SSICQTTKRITVPYRPIQIRSKP*ASSKLV
Trigger: CACTAGCTTCGAGGAAGCCAAGGGCTTAGACCGAAT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTTGATGGAGTTAAGGTaGGCGTCAGAGGGCATGGCA +
Preference number: 5 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHLMELR*ASEGMA
Trigger: TGCCATGCCCTCTGACGCCAACCTTAACTCCATCAA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGAGGTGAGAGCCTTGTaGATGGAGTTAAGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: SSICQTTKRITVPYRPIQEVRAL*MELRLA
Trigger: CGCCAACCTTAACTCCATCAACAAGGCTCTCACCTC...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATCTGCTATTACTGCCATaGCTGTCCGTGCCGTTAGTC +
Preference number: 5 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHLLLLP*LSVPLV
Trigger: GACTAACGGCACGGACAGCAATGGCAGTAATAGCAG...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACCTCAACAGTAGCGCTTaGCAGGGTTTGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYLNSSA*QGLLPS
Trigger: GGAGGGAAGCAAACCCTGCAAAGCGCTACTGTTGAG...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTGCGGTACCCTGCATCTaGGGCTTCGTGGGCTCGGAG +
Preference number: 5 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLAVPCI*GFVGSE
Trigger: CTCCGAGCCCACGAAGCCCAAGATGCAGGGTACCGC...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACGAGGTGAGAGCCTTGTaGATGGAGTTAAGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYEVRAL*MELRLA
Trigger: CGCCAACCTTAACTCCATCAACAAGGCTCTCACCTC...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGTGTGGTGAAAATCCTTaGATAGCTTCATCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQCGENP*IASSAS
Trigger: TGAGGCTGATGAAGCTATCAAAGGATTTTCACCACA...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACGAGCTGGCTTTAAAGTaGCTGCCTTTTCCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: QKSNYKGKALGCSELLGHELALK*LPFPRV
Trigger: GACGCGCGGAAAAGGCAGCAACTTTAAAGCCAGCTC...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATAACACTCTGGCCATTTaGCCTATTGCTCGGATCTTG +
Preference number: 5 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHNTLAI*PIARIL
Trigger: CAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGTT...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGAACACTCTGGCCATTTaGCCTATTGCTCGGATCTTG +
Preference number: 5 (lower is better)
Translates to: SSICQTTKRITVPYRPIQNTLAI*PIARIL
Trigger: CAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGTT...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATGGGGAGCATGCCAGTaGGGGTCAAGCCTTTCAGCG +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKWGACQ*GSSLSA
Trigger: CGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCCA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACCTCAACAGTAGCGCTTaGCAGGGTTTGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: QKSNYKGKALGCSELLGHLNSSA*QGLLPS
Trigger: GGAGGGAAGCAAACCCTGCAAAGCGCTACTGTTGAG...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394854.8
ENST00000512215.5
CDS TCA 90 bp CGAGGTTTTCCATCATTATCAAACACTTCTTTTGCTGTAAGCCGGTaGCTTGGAGGAAATGGAACAGCTTGCGGAGAAGAGCTACGACTG +
Preference number: 5 (lower is better)
Translates to: RGFPSLSNTSFAVSR*LGGNGTACGEELRL
Trigger: CAGTCGTAGCTCTTCTCCGCAAGCTGTTCCATTTCCTCCAAGTCACCGGCTTACAGCAAAAGAAGTGTTTGATAATGATGGAAAACCTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529324.5
CDS-3UTR CAA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTGGCCATTTTGCCTATaGCTCGGATCTTGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHWPFCL*LGSCSL
Trigger: TAAGGAACAAGATCCGAGCAATAGGCAAAATGGCCA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGTGGCCATTTTGCCTATaGCTCGGATCTTGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: SSICQTTKRITVPYRPIQWPFCL*LGSCSL
Trigger: TAAGGAACAAGATCCGAGCAATAGGCAAAATGGCCA...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTCTGAGGTGAGAGCCTaGTTGATGGAGTTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYSEVRA*LMELRL
Trigger: CAACCTTAACTCCATCAACAAGGCTCTCACCTCAGA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACCTGCTATTACTGCCATaGCTGTCCGTGCCGTTAGTC +
Preference number: 5 (lower is better)
Translates to: QKSNYKGKALGCSELLGHLLLLP*LSVPLV
Trigger: GACTAACGGCACGGACAGCAATGGCAGTAATAGCAG...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp AGAGGCAAGAACATCCAACTGCTGATATGCAGCAATCCCCATCATGCCCCGCAGGCTGTAGTGAATTACTaGGGCACTTATACAATTGTT +
Preference number: 5 (lower is better)
Translates to: RGKNIQLLICSNPHHAPQAVVNY*GTYTIV
Trigger: AACAATTGTATAAGTGCCCAAGTAATTCACTACAGC...CTGCGGGGCATGATGGGGATTGCTGCATATCAGCAGTTGGATGTTCTTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTTTTTAACTGGCTCCTaGAGGAAGCCAGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYFLTGS*RKPEDG
Trigger: GCCATCTTCTGGCTTCCTCAAGGAGCCAGTTAAAAA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAGAGCTGGCTTTAAAGTaGCTGCCTTTTCCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGELALK*LPFPRV
Trigger: GACGCGCGGAAAAGGCAGCAACTTTAAAGCCAGCTC...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTCGGTCGTCGACAACTaGGGATCAATTGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYSVVDN*GSIALG
Trigger: GCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATCGGTCGTCGACAACTaGGGATCAATTGCCTTGGGC +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKSVVDN*GSIALG
Trigger: GCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTGGCCATTTTGCCTATaGCTCGGATCTTGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYWPFCL*LGSCSL
Trigger: TAAGGAACAAGATCCGAGCAATAGGCAAAATGGCCA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACTCAACAGTAGCGCTTaGCAGGGTTTGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGLNSSA*QGLLPS
Trigger: GGAGGGAAGCAAACCCTGCAAAGCGCTACTGTTGAG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS TCA 90 bp TACATTCCTTCCCTGCCATGTGTGAAATCTCCTTTCTGTGTCATTTaGAAGCCATCCGTTTTTACCTTGGTGTGTGAATCGGGGTCATCT +
Preference number: 5 (lower is better)
Translates to: YIPSLPCVKSPFCVI*KPSVFTLVCESGSS
Trigger: AGATGACCCCGATTCACACACCAAGGTAAAAACGGATGGCTTTCAAATGACACAGAAAGGAGATTTCACACATGGCAGGGAAGGAATGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR CAA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGTTTCCTGTCGAAGAATaGATGCACCCTCTGTTATTA +
Preference number: 5 (lower is better)
Translates to: SSICQTTKRITVPYRPIQFPVEE*MHPLLL
Trigger: TAATAACAGAGGGTGCATCAATTCTTCGACAGGAAA...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTATGCAGGTGGTTCTTaGAATCGGTCTAATTTTCTG +
Preference number: 5 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHYAGGS*NRSNFL
Trigger: CAGAAAATTAGACCGATTCAAAGAACCACCTGCATA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTCCGGGCTGCAGCTGTaGCACCATCAAATCCATCTT +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYSGLQL*HHQIHL
Trigger: AAGATGGATTTGATGGTGCAACAGCTGCAGCCCGGA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATCCGGGCTGCAGCTGTaGCACCATCAAATCCATCTT +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKSGLQL*HHQIHL
Trigger: AAGATGGATTTGATGGTGCAACAGCTGCAGCCCGGA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATCCGGGCTGCAGCTGTaGCACCATCAAATCCATCTT +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGSGLQL*HHQIHL
Trigger: AAGATGGATTTGATGGTGCAACAGCTGCAGCCCGGA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAGCGCTTTGCAGGGTTaGCTTCCCTCCAGAAAGTAC +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGSALQG*LPSRKY
Trigger: GTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGCT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATCCTTTGATAGCGCTTaGCAGGGTTTGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGSFDSA*QGLLPS
Trigger: GGAGGGAAGCAAACCCTGCAAAGCGCTATCAAAGGA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394853.8
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTCCTTTGATAGCGCTTaGCAGGGTTTGCTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYSFDSA*QGLLPS
Trigger: GGAGGGAAGCAAACCCTGCAAAGCGCTATCAAAGGA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394853.8
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAATTCGGTCTAAGCCCTaGGCTTCCTCGAAGCTAGTG +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGIRSKP*ASSKLV
Trigger: CACTAGCTTCGAGGAAGCCAAGGGCTTAGACCGAAT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAATTCGGTCTAAGCCCTaGGCTTCCTCGAAGCTAGTG +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKIRSKP*ASSKLV
Trigger: CACTAGCTTCGAGGAAGCCAAGGGCTTAGACCGAAT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATTGATGGAGTTAAGGTaGGCGTCAGAGGGCATGGCA +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKLMELR*ASEGMA
Trigger: TGCCATGCCCTCTGACGCCAACCTTAACTCCATCAA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAGAGGTGAGAGCCTTGTaGATGGAGTTAAGGTTGGCG +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKEVRAL*MELRLA
Trigger: CGCCAACCTTAACTCCATCAACAAGGCTCTCACCTC...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACTGCTATTACTGCCATaGCTGTCCGTGCCGTTAGTC +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKLLLLP*LSVPLV
Trigger: GACTAACGGCACGGACAGCAATGGCAGTAATAGCAG...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCTGCTATTACTGCCATaGCTGTCCGTGCCGTTAGTC +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYLLLLP*LSVPLV
Trigger: GACTAACGGCACGGACAGCAATGGCAGTAATAGCAG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp GAATCCAATTCCTGGCCCCCAGAGCAAATAAGCTACTGTCAGAGGCAAGAACATTTACAAGTGCATGCTTaGATTGCCAACATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: ESNSWPPEQISYCQRQEHLQVHA*IANMSE
Trigger: TTCTGACATGTTGGCAATCAAAGCATGCACTTGTAA...ATGTTCTTGCCTCTGACAGTAGCTTATTTGCTCTGGGGGCCAGGAATTGGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTTTTAACTGGCTCCTaGAGGAAGCCAGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: QKSNYKGKALGCSELLGHFLTGS*RKPEDG
Trigger: GCCATCTTCTGGCTTCCTCAAGGAGCCAGTTAAAAA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TTAAACAGGCTTCTCTTATCTGATTTGAGACACAAATCCACCAAGATTCTTTCTGAGCTGGCTTTAAAGTaGCTGCCTTTTCCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: LNRLLLSDLRHKSTKILSELALK*LPFPRV
Trigger: GACGCGCGGAAAAGGCAGCAACTTTAAAGCCAGCTC...AGAAAGAATCTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAGCCTGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACACAACTTGGGATCAATaGCCTTGGGCTCGGACATCT +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYTTWDQ*PWARTS
Trigger: AGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGT...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAACAACTTGGGATCAATaGCCTTGGGCTCGGACATCT +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGTTWDQ*PWARTS
Trigger: AGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAACAACTTGGGATCAATaGCCTTGGGCTCGGACATCT +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKTTWDQ*PWARTS
Trigger: AGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTTTCCTGTCGAAGAATaGATGCACCCTCTGTTATTA +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYFPVEE*MHPLLL
Trigger: TAATAACAGAGGGTGCATCAATTCTTCGACAGGAAA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTTCCGGGCTGCAGCTGTaGCACCATCAAATCCATCTT +
Preference number: 5 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLSGLQL*HHQIHL
Trigger: AAGATGGATTTGATGGTGCAACAGCTGCAGCCCGGA...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACCCTATTGCTCGGATCTaGTTCCTTATCACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QKSNYKGKALGCSELLGHPIARI*FLITSF
Trigger: GAAAGAGGTGATAAGGAACAAGATCCGAGCAATAGG...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTCTGCTATTACTGCCATaGCTGTCCGTGCCGTTAGTC +
Preference number: 5 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLLLLLP*LSVPLV
Trigger: GACTAACGGCACGGACAGCAATGGCAGTAATAGCAG...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACAGGCTGTAGTGAATTACTaGGGCACTTATACAATTGTT +
Preference number: 5 (lower is better)
Translates to: SSICQTTKRITVPYRPIQAVVNY*GTYTIV
Trigger: AACAATTGTATAAGTGCCCAAGTAATTCACTACAGC...CTGTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACTTACAAGTGCATGCTTaGATTGCCAACATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYLQVHA*IANMSE
Trigger: TTCTGACATGTTGGCAATCAAAGCATGCACTTGTAA...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 90 bp ATTCTCAATGCAACACTCTCTTCCAGCCTTCCCTCCTTCATAAGATaGGCCTTTAAGATATCCACACGAGGTTTTCCATCATTATCAAAC +
Preference number: 5 (lower is better)
Translates to: ILNATLSSSLPSFIR*AFKISTRGFPSLSN
Trigger: GTTTGATAATGATGGAAAACCTCGTGTGGATATCTTAAAGGCGCATCTTATGAAGGAGGGAAGGCTGGAAGAGAGTGTTGCATTGAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
ENST00000525819.1
ENST00000529324.5
CDS-3UTR CAA 90 bp CCACAAACCAAGGTACACAGAGAAAAGTCCTTTGGGTGGTTGTCAGTAGTTTACTATGCAGGTGGTTCTTaGAATCGGTCTAATTTTCTG +
Preference number: 5 (lower is better)
Translates to: PQTKVHREKSFGWLSVVYYAGGS*NRSNFL
Trigger: CAGAAAATTAGACCGATTCAAAGAACCACCTGCATA...GTAAACTACTGACAACCACCCAAAGGACTTTTCTCTGTGTACCTTGGTTTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACACTCTGGCCATTTaGCCTATTGCTCGGATCTTG +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGNTLAI*PIARIL
Trigger: CAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGTT...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAAAACACTCTGGCCATTTaGCCTATTGCTCGGATCTTG +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKNTLAI*PIARIL
Trigger: CAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGTT...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATCTGAGGTGAGAGCCTaGTTGATGGAGTTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGSEVRA*LMELRL
Trigger: CAACCTTAACTCCATCAACAAGGCTCTCACCTCAGA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATCTGAGGTGAGAGCCTaGTTGATGGAGTTAAGGTTG +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKSEVRA*LMELRL
Trigger: CAACCTTAACTCCATCAACAAGGCTCTCACCTCAGA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp TTTCCAGTATATGTCAGACCACTAAGCGCATTACAGTCCCATACAGGCCGATACGCTGTAGTGAATTACTaGGGCACTTATACAATTGTT +
Preference number: 5 (lower is better)
Translates to: FPVYVRPLSALQSHTGRYAVVNY*GTYTIV
Trigger: AACAATTGTATAAGTGCCCAAGTAATTCACTACAGC...GTATCGGCCTGTATGGGACTGTAATGCGCTTAGTGGTCTGACATATACTGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATTTTTAACTGGCTCCTaGAGGAAGCCAGAAGATGGC +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKFLTGS*RKPEDG
Trigger: GCCATCTTCTGGCTTCCTCAAGGAGCCAGTTAAAAA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAAGTCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTGTGGTGAAAATCCTTaGATAGCTTCATCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: QKSNYKGKALGCSELLGHCGENP*IASSAS
Trigger: TGAGGCTGATGAAGCTATCAAAGGATTTTCACCACA...GTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGACTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCCTATTGCTCGGATCTaGTTCCTTATCACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYPIARI*FLITSF
Trigger: GAAAGAGGTGATAAGGAACAAGATCCGAGCAATAGG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAACCTATTGCTCGGATCTaGTTCCTTATCACCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKPIARI*FLITSF
Trigger: GAAAGAGGTGATAAGGAACAAGATCCGAGCAATAGG...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATGGCCATTTTGCCTATaGCTCGGATCTTGTTCCTTA +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKWPFCL*LGSCSL
Trigger: TAAGGAACAAGATCCGAGCAATAGGCAAAATGGCCA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATGTGGTGAAAATCCTTaGATAGCTTCATCAGCCTCA +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKCGENP*IASSAS
Trigger: TGAGGCTGATGAAGCTATCAAAGGATTTTCACCACA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATTTCCTGTCGAAGAATaGATGCACCCTCTGTTATTA +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKFPVEE*MHPLLL
Trigger: TAATAACAGAGGGTGCATCAATTCTTCGACAGGAAA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACTTTCCTGTCGAAGAATaGATGCACCCTCTGTTATTA +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYFPVEE*MHPLLL
Trigger: TAATAACAGAGGGTGCATCAATTCTTCGACAGGAAA...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp CAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGAAATATGCAGGTGGTTCTTaGAATCGGTCTAATTTTCTG +
Preference number: 5 (lower is better)
Translates to: QNKRPFINLSRSPQCSRKYAGGS*NRSNFL
Trigger: CAGAAAATTAGACCGATTCAAAGAACCACCTGCATA...TTTCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGATATGCAGGTGGTTCTTaGAATCGGTCTAATTTTCTG +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGYAGGS*NRSNFL
Trigger: CAGAAAATTAGACCGATTCAAAGAACCACCTGCATA...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
CDS-3UTR CAA 90 bp AACAGAATAAAAGGCCTTTCATTAACCTATCTAGAAGTCCCCAATGCAGTAGGACTTCTCTTATCTGATTaGAGACACAAATCCACCAAG +
Preference number: 5 (lower is better)
Translates to: NRIKGLSLTYLEVPNAVGLLLSD*RHKSTK
Trigger: CTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAG...TCCTACTGCATTGGGGACTTCTAGATAGGTTAATGAAAGGCCTTTTATTCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACCTTCTCTTATCTGATTaGAGACACAAATCCACCAAG +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYLLLSD*RHKSTK
Trigger: CTTGGTGGATTTGTGTCTCAAATCAGATAAGAGAAG...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp TCAAATTACAAAGGCAAGGCTTTAGGCTGTAGTGAATTACTTGGGCACTTATACGCTGTAGTGAATTACTaGGGCACTTATACAATTGTT +
Preference number: 5 (lower is better)
Translates to: SNYKGKALGCSELLGHLYAVVNY*GTYTIV
Trigger: AACAATTGTATAAGTGCCCAAGTAATTCACTACAGC...GTATAAGTGCCCAAGTAATTCACTACAGCCTAAAGCCTTGCCTTTGTAATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS-3UTR CAA 90 bp ATTTCACAAGGTTTGCTAAACATGCTAACCATCTACATGTGCATTGACAAGCTTTTACAAGTGCATGCTTaGATTGCCAACATGTCAGAA +
Preference number: 5 (lower is better)
Translates to: ISQGLLNMLTIYMCIDKLLQVHA*IANMSE
Trigger: TTCTGACATGTTGGCAATCAAAGCATGCACTTGTAA...AAGCTTGTCAATGCACATGTAGATGGTTAGCATGTTTAGCAAACCTTGTGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp TGGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTGCTaGCGCTGCTGCTGCCGCTGCCGCTGTTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: WRPRRRRGGRRC*RCCCRCRCCCC
Trigger: GCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTCCGCCGCCGGGGACGCCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp CCTTGGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTaGTGCCGCTGCTGCTGCCGCTGCCGCTGTTGCTGC +
Preference number: 6 (lower is better)
Translates to: PWRPRRRRGGRR*CRCCCRCRCCC
Trigger: GCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTCCGCCGCCGGGGACGCCAAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS CCA 72 bp GCAGGGCCGCCGATGTCAGTGCCACCAGCCGCACCTTaGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTGC +
Preference number: 6 (lower is better)
Translates to: AGPPMSVPPAAP*RPRRRRGGRRC
Trigger: GCAGCGGCGGCCGCCTCTCCGCCGCCGGGGACGCCAAGGTGCGGCTGGTGGCACTGACATCGGCGGCCCTGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS CAA 72 bp GGCAGGGCCGCCGATGTCAGTGCCACCAGCCGCACCTaGGCGTCCCCGGCGGCGGAGAGGCGGCCGCCGCTG +
Preference number: 6 (lower is better)
Translates to: GRAADVSATSRT*ASPAAERRPPL
Trigger: CAGCGGCGGCCGCCTCTCCGCCGCCGGGGACGCCAAGGTGCGGCTGGTGGCACTGACATCGGCGGCCCTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS CAA 90 bp GAGAGGCGGCCGCCGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTaGCTGCTGCCGCTGCCCCTGCTTCTCCACACAGAGCGCCGCCGC +
Preference number: 6 (lower is better)
Translates to: ERRPPLLPLLLPLPL*LLPLPLLLHTERRR
Trigger: GCGGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGGCCGCCTCTC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp GGGGCGAGGGAGGAGAGGCAGGGCCGCCGATGTCAGTaGCACCAGCCGCACCTTGGCGTCCCCGGCGGCGGA +
Preference number: 6 (lower is better)
Translates to: GAREERQGRRCQ*HQPHLGVPGGG
Trigger: TCCGCCGCCGGGGACGCCAAGGTGCGGCTGGTGGCACTGACATCGGCGGCCCTGCCTCTCCTCCCTCGCCCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp TGCTGCCGCTGCCGCTGTTGCTGCTGCCGCTGCCCCTaGTTCTCCACACAGAGCGCCGCCGCTGGTGCCGCG +
Preference number: 6 (lower is better)
Translates to: CCRCRCCCCRCP*FSTQSAAAGAA
Trigger: CGCGGCACCAGCGGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp GCCGGAGGACAGCGACGCGCTGCTCGTCCGTCCGACTaGACACCCCGACCGGACCGGCGGGCCAGACACTCA +
Preference number: 6 (lower is better)
Translates to: AGGQRRAARPSD*TPRPDRRARHS
Trigger: TGAGTGTCTGGCCCGCCGGTCCGGTCGGGGTGTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCTCCGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp CGCTGCTGCTGCCGCTGCCGCTGTTGCTGCTGCCGCTaGCCCTGCTTCTCCACACAGAGCGCCGCCGCTGGT +
Preference number: 6 (lower is better)
Translates to: RCCCRCRCCCCR*PCFSTQSAAAG
Trigger: ACCAGCGGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp TGCTGCCGCTGCTGCTGCCGCTGCCGCTGTTGCTGCTaGCGCTGCCCCTGCTTCTCCACACAGAGCGCCGCC +
Preference number: 6 (lower is better)
Translates to: CCRCCCRCRCCC*RCPCFSTQSAA
Trigger: GGCGGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp CGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTTGCTaGTGCCGCTGCCCCTGCTTCTCCACACAGAGCGCC +
Preference number: 6 (lower is better)
Translates to: RCCRCCCRCRCC*CRCPCFSTQSA
Trigger: GGCGCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp CGCCGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTTaGTGCTGCCGCTGCCCCTGCTTCTCCACACAGAGC +
Preference number: 6 (lower is better)
Translates to: RRCCRCCCRCRC*CCRCPCFSTQS
Trigger: GCTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS CAA 72 bp CCGCCGCTGCTGCCGCTGCTGCTGCCGCTGCCGCTGTaGCTGCTGCCGCTGCCCCTGCTTCTCCACACAGAG +
Preference number: 6 (lower is better)
Translates to: PPLLPLLLPLPL*LLPLPLLLHTE
Trigger: CTCTGTGTGGAGAAGCAGGGGCAGCGGCAGCAGCAACAGCGGCAGCGGCAGCAGCAGCGGCAGCAGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323055.10
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp TCGGACATCTCCAGCTGCCGGAGGACAGCGACGCGCTaGTCGTCCGTCCGACTGCACACCCCGACCGGACCG +
Preference number: 6 (lower is better)
Translates to: SDISSCRRTATR*SSVRLHTPTGP
Trigger: CGGTCCGGTCGGGGTGTGCAGTCGGACGGACGAGCAGCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp TTGGGATCAATTGCCTTGGGCTCGGACATCTCCAGCTaGCGGAGGACAGCGACGCGCTGCTCGTCCGTCCGA +
Preference number: 6 (lower is better)
Translates to: LGSIALGSDISS*RRTATRCSSVR
Trigger: TCGGACGGACGAGCAGCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CAA 72 bp TCGGCTGGAGGTCTAGGCTCTGAGCTGGCTTTAAAGTaGCTGCCTTTTCCGCGCGTCCCTCCTCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SAGGLGSELALK*LPFPRVPPPPP
Trigger: CGGCGGCGGAGGAGGGACGCGCGGAAAAGGCAGCAACTTTAAAGCCAGCTCAGAGCCTAGACCTCCAGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS CAA 90 bp GCTTTCACCACCCTGTCGGTCGTCGACAACTTGGGATCAATTGCCTaGGGCTCGGACATCTCCAGCTGCCGGAGGACAGCGACGCGCTGC +
Preference number: 6 (lower is better)
Translates to: AFTTLSVVDNLGSIA*GSDISSCRRTATRC
Trigger: GCAGCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS CAA 90 bp ACTTTCACCACCCTGTCGGTCGTCGACAACTTGGGATCAATTGCCTaGGGCTCGGACATCTCCAGCTGCCGGAGGACAGCGACGCGCTGC +
Preference number: 6 (lower is better)
Translates to: TFTTLSVVDNLGSIA*GSDISSCRRTATRC
Trigger: GCAGCGCGTCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507176.5
CDS TCA 72 bp CCGCGCTGCAAACCGCTCGGCTGGAGGTCTAGGCTCTaGGCTGGCTTTAAAGTTGCTGCCTTTTCCGCGCGT +
Preference number: 6 (lower is better)
Translates to: PRCKPLGWRSRL*AGFKVAAFSAR
Trigger: ACGCGCGGAAAAGGCAGCAACTTTAAAGCCAGCTCAGAGCCTAGACCTCCAGCCGAGCGGTTTGCAGCGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS GCA 72 bp CACCACCCTGTCGGTCGTCGACAACTTGGGATCAATTaGCTTGGGCTCGGACATCTCCAGCTGCCGGAGGAC +
Preference number: 6 (lower is better)
Translates to: HHPVGRRQLGIN*LGLGHLQLPED
Trigger: GTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CCA 72 bp CCCTGTCGGTCGTCGACAACTTGGGATCAATTGCCTTaGGCTCGGACATCTCCAGCTGCCGGAGGACAGCGA +
Preference number: 6 (lower is better)
Translates to: PCRSSTTWDQLP*ARTSPAAGGQR
Trigger: TCGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CAA 72 bp ACCCTGTCGGTCGTCGACAACTTGGGATCAATTGCCTaGGGCTCGGACATCTCCAGCTGCCGGAGGACAGCG +
Preference number: 6 (lower is better)
Translates to: TLSVVDNLGSIA*GSDISSCRRTA
Trigger: CGCTGTCCTCCGGCAGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CAA 72 bp GTCTCTGAGGTGAGAGCCTTGTTGATGGAGTTAAGGTaGGCGTCAGAGGGCATGGCATCTCTGCGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: VSEVRALLMELR*ASEGMASLRGG
Trigger: GCCGCCTCGCAGAGATGCCATGCCCTCTGACGCCAACCTTAACTCCATCAACAAGGCTCTCACCTCAGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CAA 90 bp GTGCCGTTAGTCTCTGAGGTGAGAGCCTTGTTGATGGAGTTAAGGTaGGCGTCAGAGGGCATGGCATCTCTGCGAGGCGGCATCCTCTCA +
Preference number: 6 (lower is better)
Translates to: VPLVSEVRALLMELR*ASEGMASLRGGILS
Trigger: TGAGAGGATGCCGCCTCGCAGAGATGCCATGCCCTCTGACGCCAACCTTAACTCCATCAACAAGGCTCTCACCTCAGAGACTAACGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS GCA 72 bp TTTGCTTCCCTCCAGAAAGTACTCCGCTGGGGAGCATaGCAGTTGGGGTCAAGCCTTTCAGCGTCAGCACAC +
Preference number: 6 (lower is better)
Translates to: FASLQKVLRWGA*QLGSSLSASAH
Trigger: GTGTGCTGACGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCCAGCGGAGTACTTTCTGGAGGGAAGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CCA 72 bp TTTGCAGGGTTTGCTTCCCTCCAGAAAGTACTCCGCTaGGGAGCATGCCAGTTGGGGTCAAGCCTTTCAGCG +
Preference number: 6 (lower is better)
Translates to: FAGFASLQKVLR*GACQLGSSLSA
Trigger: CGCTGAAAGGCTTGACCCCAACTGGCATGCTCCCCAGCGGAGTACTTTCTGGAGGGAAGCAAACCCTGCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CAA 72 bp GGAACAGCTTTCACCACCCTGTCGGTCGTCGACAACTaGGGATCAATTGCCTTGGGCTCGGACATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GTAFTTLSVVDN*GSIALGSDISS
Trigger: GCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGCTGTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS CAA 90 bp CTGCCATTGCTGTCCGTGCCGTTAGTCTCTGAGGTGAGAGCCTTGTaGATGGAGTTAAGGTTGGCGTCAGAGGGCATGGCATCTCTGCGA +
Preference number: 6 (lower is better)
Translates to: LPLLSVPLVSEVRAL*MELRLASEGMASLR
Trigger: TCGCAGAGATGCCATGCCCTCTGACGCCAACCTTAACTCCATCAACAAGGCTCTCACCTCAGAGACTAACGGCACGGACAGCAATGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS GCA 72 bp GCCTCAATAGCCTCAACAGTAGCGCTTTGCAGGGTTTaGTTCCCTCCAGAAAGTACTCCGCTGGGGAGCATG +
Preference number: 6 (lower is better)
Translates to: ASIASTVALCRV*FPPESTPLGSM
Trigger: CATGCTCCCCAGCGGAGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGCTACTGTTGAGGCTATTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CCA 72 bp GAACAGCTTTCACCACCCTGTCGGTCGTCGACAACTTaGGATCAATTGCCTTGGGCTCGGACATCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: EQLSPPCRSSTT*DQLPWARTSPA
Trigger: AGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGCTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
CDS CAA 72 bp CTGTCCGTGCCGTTAGTCTCTGAGGTGAGAGCCTTGTaGATGGAGTTAAGGTTGGCGTCAGAGGGCATGGCA +
Preference number: 6 (lower is better)
Translates to: LSVPLVSEVRAL*MELRLASEGMA
Trigger: TGCCATGCCCTCTGACGCCAACCTTAACTCCATCAACAAGGCTCTCACCTCAGAGACTAACGGCACGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CAA 72 bp CCACAAACTTTCACCACCCTGTCGGTCGTCGACAACTaGGGATCAATTGCCTTGGGCTCGGACATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PQTFTTLSVVDN*GSIALGSDISS
Trigger: GCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGTTTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507176.5
CDS CCA 72 bp CACAAACTTTCACCACCCTGTCGGTCGTCGACAACTTaGGATCAATTGCCTTGGGCTCGGACATCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: HKLSPPCRSSTT*DQLPWARTSPA
Trigger: AGCTGGAGATGTCCGAGCCCAAGGCAATTGATCCCAAGTTGTCGACGACCGACAGGGTGGTGAAAGTTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507176.5
CDS CAA 72 bp TTGCTGTCCGTGCCGTTAGTCTCTGAGGTGAGAGCCTaGTTGATGGAGTTAAGGTTGGCGTCAGAGGGCATG +
Preference number: 6 (lower is better)
Translates to: LLSVPLVSEVRA*LMELRLASEGM
Trigger: CATGCCCTCTGACGCCAACCTTAACTCCATCAACAAGGCTCTCACCTCAGAGACTAACGGCACGGACAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CAA 72 bp AGCCTCAATAGCCTCAACAGTAGCGCTTTGCAGGGTTaGCTTCCCTCCAGAAAGTACTCCGCTGGGGAGCAT +
Preference number: 6 (lower is better)
Translates to: SLNSLNSSALQG*LPSRKYSAGEH
Trigger: ATGCTCCCCAGCGGAGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGCTACTGTTGAGGCTATTGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS CAA 90 bp TTACTGCCATTGCTGTCCGTGCCGTTAGTCTCTGAGGTGAGAGCCTaGTTGATGGAGTTAAGGTTGGCGTCAGAGGGCATGGCATCTCTG +
Preference number: 6 (lower is better)
Translates to: LLPLLSVPLVSEVRA*LMELRLASEGMASL
Trigger: CAGAGATGCCATGCCCTCTGACGCCAACCTTAACTCCATCAACAAGGCTCTCACCTCAGAGACTAACGGCACGGACAGCAATGGCAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS GCA 72 bp AATGACAAAGAGTCATCATCTCAGAGTCCCCTGGCCTaGTCCTGGTGCATCACCAGCCTCATCTGTATTCCC +
Preference number: 6 (lower is better)
Translates to: NDKESSSQSPLA*SWCITSLICIP
Trigger: GGGAATACAGATGAGGCTGGTGATGCACCAGGAGCAGGCCAGGGGACTCTGAGATGATGACTCTTTGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510292.1
CDS TCA 72 bp GCTATTACTGCCATTGCTGTCCGTGCCGTTAGTCTCTaGGGTGAGAGCCTTGTTGATGGAGTTAAGGTTGGC +
Preference number: 6 (lower is better)
Translates to: AITAIAVRAVSL*GESLVDGVKVG
Trigger: GCCAACCTTAACTCCATCAACAAGGCTCTCACCTCAGAGACTAACGGCACGGACAGCAATGGCAGTAATAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS GCA 72 bp TGTGGTGAAAATCCTTTGATAGCGCTTTGCAGGGTTTaGTTCCCTCCAGAAAGTACTCCGCTGGGGAGCATG +
Preference number: 6 (lower is better)
Translates to: CGENPLIALCRV*FPPESTPLGSM
Trigger: CATGCTCCCCAGCGGAGTACTTTCTGGAGGGAAGCAAACCCTGCAAAGCGCTATCAAAGGATTTTCACCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323055.10
ENST00000394853.8
CDS TCA 72 bp TGTCATTTGAAAGCCATCCGTTTTTACCTTGGTGTGTaGATCGGGGTCATCTGTGGAGCTTCAGTGACTGGC +
Preference number: 6 (lower is better)
Translates to: CHLKAIRFYLGV*IGVICGASVTG
Trigger: GCCAGTCACTGAAGCTCCACAGATGACCCCGATTCACACACCAAGGTAAAAACGGATGGCTTTCAAATGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS TCA 72 bp CCATCATTATCAAACACTTCTTTTGCTGTAAGCCGGTaGCTTGGAGGAAATGGAACAGCAAGGCACAGCCGC +
Preference number: 6 (lower is better)
Translates to: PSLSNTSFAVSR*LGGNGTARHSR
Trigger: GCGGCTGTGCCTTGCTGTTCCATTTCCTCCAAGTCACCGGCTTACAGCAAAAGAAGTGTTTGATAATGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525819.1
CDS CAA 72 bp CTCTCTTCTCTGAGCACTGAGAACACTCTGGCCATTTaGCCTATTGCTCGGATCTTGTTCCTTATCACCTCT +
Preference number: 6 (lower is better)
Translates to: LSSLSTENTLAI*PIARILFLITS
Trigger: AGAGGTGATAAGGAACAAGATCCGAGCAATAGGCAAAATGGCCAGAGTGTTCTCAGTGCTCAGAGAAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000507176.5
ENST00000512215.5
CDS TCA 72 bp CCATCATTATCAAACACTTCTTTTGCTGTAAGCCGGTaGCTTGGAGGAAATGGAACAGCTTGCGGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: PSLSNTSFAVSR*LGGNGTACGEE
Trigger: CTCTTCTCCGCAAGCTGTTCCATTTCCTCCAAGTCACCGGCTTACAGCAAAAGAAGTGTTTGATAATGATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529324.5
CDS CCA 72 bp CTTTCTGTGTCATTTGAAAGCCATCCGTTTTTACCTTaGTGTGTGAATCGGGGTCATCTGTGGAGCTTCAGT +
Preference number: 6 (lower is better)
Translates to: LSVSFESHPFLP*CVNRGHLWSFS
Trigger: ACTGAAGCTCCACAGATGACCCCGATTCACACACCAAGGTAAAAACGGATGGCTTTCAAATGACACAGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS CCA 72 bp ATTATCAAACACTTCTTTTGCTGTAAGCCGGTGACTTaGAGGAAATGGAACAGCTTGCGGAGAAGAGCTACG +
Preference number: 6 (lower is better)
Translates to: IIKHFFCCKPVT*RKWNSLRRRAT
Trigger: CGTAGCTCTTCTCCGCAAGCTGTTCCATTTCCTCCAAGTCACCGGCTTACAGCAAAAGAAGTGTTTGATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529324.5
CDS TCA 72 bp TCCCTGCCATGTGTGAAATCTCCTTTCTGTGTCATTTaGAAGCCATCCGTTTTTACCTTGGTGTGTGAATCG +
Preference number: 6 (lower is better)
Translates to: SLPCVKSPFCVI*KPSVFTLVCES
Trigger: CGATTCACACACCAAGGTAAAAACGGATGGCTTTCAAATGACACAGAAAGGAGATTTCACACATGGCAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000492351.6
CDS GCA 72 bp CACACGAGGTTTTCCATCATTATCAAACACTTCTTTTaGTGTAAGCCGGTGACTTGGAGGAAATGGAACAGC +
Preference number: 6 (lower is better)
Translates to: HTRFSIIIKHFF*CKPVTWRKWNS
Trigger: GCTGTTCCATTTCCTCCAAGTCACCGGCTTACAGCAAAAGAAGTGTTTGATAATGATGGAAAACCTCGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000323055.10
ENST00000394853.8
ENST00000394854.8
ENST00000512215.5
ENST00000525819.1
ENST00000529324.5