Pregenerated sensors for PPP2R5E (Homo sapiens)
Ensembl gene IDs: ENSG00000154001Ensembl transcript IDs: ENST00000337537.8, ENST00000422769.6, ENST00000553266.5, ENST00000555899.1, ENST00000556484.5, ENST00000556878.1
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACCGACCCCGTTGCGGCTCCGCCGGTGGCTCCTCGCTCACATTCCTaGCGGGCGGCGCCTCAGCTCGTTGCCCCGGACCCGGCGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: TDPVAAPPVAPRSHS*RAAPQLVAPDPAAA Trigger: CGCCGCCGCCGGGTCCGGGGCAACGAGCTGAGGCGCCGCCCGCCAGGAATGTGAGCGAGGAGCCACCGGCGGAGCCGCAACGGGGTCGGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CCA 90 bp | GGAGCCTCTAGGCCTCACGGCCGGACCCGAACCTCAGCGTTCCGGTaGCGGCGGCGGCCTCACGATCCTCCCCCGCGGGCCCGTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: GASRPHGRTRTSAFR*RRRPHDPPPRARPI Trigger: GATGGGACGGGCCCGCGGGGGAGGATCGTGAGGCCGCCGCCGCCACCGGAACGCTGAGGTTCGGGTCCGGCCGTGAGGCCTAGAGGCTCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS GCA 90 bp | ATCCTCCCCCGCGGGCCCGTCCCATCAAATCGGCACCGACCCCGTTaGGGCTCCGCCGGTGGCTCCTCGCTCACATTCCTGGCGGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: ILPRGPVPSNRHRPR*GSAGGSSLTFLAGG Trigger: GCCGCCCGCCAGGAATGTGAGCGAGGAGCCACCGGCGGAGCCGCAACGGGGTCGGTGCCGATTTGATGGGACGGGCCCGCGGGGGAGGAT 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CCA 90 bp | GCCCGTCCCATCAAATCGGCACCGACCCCGTTGCGGCTCCGCCGGTaGCTCCTCGCTCACATTCCTGGCGGGCGGCGCCTCAGCTCGTTG | + |
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Preference number: 5 (lower is better) Translates to: ARPIKSAPTPLRLRR*LLAHIPGGRRLSSL Trigger: CAACGAGCTGAGGCGCCGCCCGCCAGGAATGTGAGCGAGGAGCCACCGGCGGAGCCGCAACGGGGTCGGTGCCGATTTGATGGGACGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS GCA 90 bp | CGCTGCCAGAGCCACCTTTCGCTACCCGCGGTGGGTCCCAGTCAATaGCCCTTTCTCTCTCCTATTGTCAATATCACCGGGCGGCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: RCQSHLSLPAVGPSQ*PFLSPIVNITGRLS Trigger: ACTCAGCCGCCCGGTGATATTGACAATAGGAGAGAGAAAGGGGCATTGACTGGGACCCACCGCGGGTAGCGAAAGGTGGCTCTGGCAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000556878.1 |
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| CDS CCA 90 bp | GGAGCTGGAGCCGCCGCTGCCAGAGCCACCTTTCGCTACCCGCGGTaGGTCCCAGTCAATGCCCCTTTCTCTCTCCTATTGTCAATATCA | + |
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Preference number: 5 (lower is better) Translates to: GAGAAAARATFRYPR*VPVNAPFSLLLSIS Trigger: TGATATTGACAATAGGAGAGAGAAAGGGGCATTGACTGGGACCCACCGCGGGTAGCGAAAGGTGGCTCTGGCAGCGGCGGCTCCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000556878.1 |
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| CDS GCA 90 bp | AGTAGACCAGCTTCCCCACCCTGCAAAGCCCATCCCCAAATAGCGTaGACTCTCCAGCTCCAAGATCTTCTGGGATGCCAAGAAAGGCAA | + |
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Preference number: 5 (lower is better) Translates to: SRPASPPCKAHPQIA*TLQLQDLLGCQERQ Trigger: TTGCCTTTCTTGGCATCCCAGAAGATCTTGGAGCTGGAGAGTGCACGCTATTTGGGGATGGGCTTTGCAGGGTGGGGAAGCTGGTCTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 90 bp | ACGTCTTTTAGCAGCGGCAGAGGTGTTAACTCAATAGGCTTGCCTTaGGACCTAAACTGTGAGGAACTTTGCGACCTCTTCTGTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: TSFSSGRGVNSIGLP*DLNCEELCDLFCLA Trigger: AGCCAGACAGAAGAGGTCGCAAAGTTCCTCACAGTTTAGGTCTCAAGGCAAGCCTATTGAGTTAACACCTCTGCCGCTGCTAAAAGACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337537.8 ENST00000555899.1 ENST00000556878.1 |
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| CDS GCA 90 bp | CTAAATACAAAAGCCAGGCAGATGTTCCGCAGTACACAGAGAGTGTaGCAGATCCTGCAATGGACTCCTCAACGATGCACTGACCTTAAG | + |
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Preference number: 5 (lower is better) Translates to: LNTKARQMFRSTQRV*QILQWTPQRCTDLK Trigger: CTTAAGGTCAGTGCATCGTTGAGGAGTCCATTGCAGGATCTGGCACACTCTCTGTGTACTGCGGAACATCTGCCTGGCTTTTGTATTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 90 bp | ATACCTTTTAGCAGCGGCAGAGGTGTTAACTCAATAGGCTTGCCTTaGGACCTAAACTGTGAGGAACTTTGCGACCTCTTCTGTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: IPFSSGRGVNSIGLP*DLNCEELCDLFCLA Trigger: AGCCAGACAGAAGAGGTCGCAAAGTTCCTCACAGTTTAGGTCTCAAGGCAAGCCTATTGAGTTAACACCTCTGCCGCTGCTAAAAGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553266.5 |
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| CDS TCA 90 bp | AGATCAGATAGCGTGTCCATGAAGTCAAAAATGACACAGCACTGCTaGAGTTTCTTTAGGAACAGTTCAGGCTGCTCTGAGGATGGAACG | + |
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Preference number: 5 (lower is better) Translates to: RSDSVSMKSKMTQHC*SFFRNSSGCSEDGT Trigger: CGTTCCATCCTCAGAGCAGCCTGAACTGTTCCTAAAGAAACTTCAGCAGTGCTGTGTCATTTTTGACTTCATGGACACGCTATCTGATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000337537.8 ENST00000422769.6 ENST00000555899.1 ENST00000556484.5 ENST00000556878.1 |
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| CDS TCA 90 bp | TTAGCTCTCCAAAGGTTGGCTCTCATTTGTGGAGTTGACCTCCAATaGCCTCACTCTTGCAATATATACACCTGTGAGTCACTATGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LALQRLALICGVDLQ*PHSCNIYTCESLWK Trigger: CTTCCATAGTGACTCACAGGTGTATATATTGCAAGAGTGAGGTCATTGGAGGTCAACTCCACAAATGAGAGCCAACCTTTGGAGAGCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS CCA 90 bp | GTGATGAAGAAGTGGAGCACAGAGGATTTTCAGGGCAGTGATGTATaGTATGTATGGTACTATAATGGTGGATACATGTCATTACACATT | + |
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Preference number: 5 (lower is better) Translates to: VMKKWSTEDFQGSDV*YVWYYNGGYMSLHI Trigger: AATGTGTAATGACATGTATCCACCATTATAGTACCATACATACCATACATCACTGCCCTGAAAATCCTCTGTGCTCCACTTCTTCATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS CCA 90 bp | AAGTGGAGCACAGAGGATTTTCAGGGCAGTGATGTATGGTATGTATaGTACTATAATGGTGGATACATGTCATTACACATTTGTCTAAAC | + |
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Preference number: 5 (lower is better) Translates to: KWSTEDFQGSDVWYV*YYNGGYMSLHICLN Trigger: GTTTAGACAAATGTGTAATGACATGTATCCACCATTATAGTACCATACATACCATACATCACTGCCCTGAAAATCCTCTGTGCTCCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 90 bp | CAGTCACAGTCTCACGCTGAGATCATTCAAGTGCCTTTGCAAATCTaGACTATCATTTTTAAACATATCTACTCCATCACAAAAGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: QSQSHAEIIQVPLQI*TIIFKHIYSITKVS Trigger: AGAGACTTTTGTGATGGAGTAGATATGTTTAAAAATGATAGTTCAGATTTGCAAAGGCACTTGAATGATCTCAGCGTGAGACTGTGACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 90 bp | CATTCAGATATAGAACTGAGGAATATATTGGGCATCGTTTTCAGATaGCCTTCATTATTTCAGTCACAGTCTCACGCTGAGATCATTCAA | + |
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Preference number: 5 (lower is better) Translates to: HSDIELRNILGIVFR*PSLFQSQSHAEIIQ Trigger: TTGAATGATCTCAGCGTGAGACTGTGACTGAAATAATGAAGGTCATCTGAAAACGATGCCCAATATATTCCTCAGTTCTATATCTGAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS GCA 90 bp | AGTAATACCCTGGCAATCTTGGCTTCATATTTTGAAGTCATTTATTaGTTCAGCACTGTCGTAGTTAAAGTTCTGGATTTCGTTCTCATG | + |
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Preference number: 5 (lower is better) Translates to: SNTLAILASYFEVIY*FSTVVVKVLDFVLM Trigger: CATGAGAACGAAATCCAGAACTTTAACTACGACAGTGCTGAAGCAATAAATGACTTCAAAATATGAAGCCAAGATTGCCAGGGTATTACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS GCA 72 bp | TCGCTCACATTCCTGGCGGGCGGCGCCTCAGCTCGTTaGCCCGGACCCGGCGGCGGCGGCGACGACGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SLTFLAGGASAR*PGPGGGGDDVG Trigger: CCCCACGTCGTCGCCGCCGCCGCCGGGTCCGGGGCAACGAGCTGAGGCGCCGCCCGCCAGGAATGTGAGCGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CCA 72 bp | AGGCCTCACGGCCGGACCCGAACCTCAGCGTTCCGGTaGCGGCGGCGGCCTCACGATCCTCCCCCGCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: RPHGRTRTSAFR*RRRPHDPPPRA Trigger: GGCCCGCGGGGGAGGATCGTGAGGCCGCCGCCGCCACCGGAACGCTGAGGTTCGGGTCCGGCCGTGAGGCCT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CAA 72 bp | CTCGCTCACATTCCTGGCGGGCGGCGCCTCAGCTCGTaGCCCCGGACCCGGCGGCGGCGGCGACGACGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LAHIPGGRRLSS*PRTRRRRRRRG Trigger: CCCACGTCGTCGCCGCCGCCGCCGGGTCCGGGGCAACGAGCTGAGGCGCCGCCCGCCAGGAATGTGAGCGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CCA 72 bp | GTTGCGGCTCCGCCGGTGGCTCCTCGCTCACATTCCTaGCGGGCGGCGCCTCAGCTCGTTGCCCCGGACCCG | + |
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Preference number: 6 (lower is better) Translates to: VAAPPVAPRSHS*RAAPQLVAPDP Trigger: CGGGTCCGGGGCAACGAGCTGAGGCGCCGCCCGCCAGGAATGTGAGCGAGGAGCCACCGGCGGAGCCGCAAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CAA 90 bp | GATCCTCCCCCGCGGGCCCGTCCCATCAAATCGGCACCGACCCCGTaGCGGCTCCGCCGGTGGCTCCTCGCTCACATTCCTGGCGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: DPPPRARPIKSAPTP*RLRRWLLAHIPGGR Trigger: CCGCCCGCCAGGAATGTGAGCGAGGAGCCACCGGCGGAGCCGCAACGGGGTCGGTGCCGATTTGATGGGACGGGCCCGCGGGGGAGGATC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS GCA 72 bp | CGCGGGCCCGTCCCATCAAATCGGCACCGACCCCGTTaGGGCTCCGCCGGTGGCTCCTCGCTCACATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RGPVPSNRHRPR*GSAGGSSLTFL Trigger: CAGGAATGTGAGCGAGGAGCCACCGGCGGAGCCGCAACGGGGTCGGTGCCGATTTGATGGGACGGGCCCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CCA 72 bp | ATCAAATCGGCACCGACCCCGTTGCGGCTCCGCCGGTaGCTCCTCGCTCACATTCCTGGCGGGCGGCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: IKSAPTPLRLRR*LLAHIPGGRRL Trigger: GAGGCGCCGCCCGCCAGGAATGTGAGCGAGGAGCCACCGGCGGAGCCGCAACGGGGTCGGTGCCGATTTGAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CAA 72 bp | CCGCGGGCCCGTCCCATCAAATCGGCACCGACCCCGTaGCGGCTCCGCCGGTGGCTCCTCGCTCACATTCCT | + |
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Preference number: 6 (lower is better) Translates to: PRARPIKSAPTP*RLRRWLLAHIP Trigger: AGGAATGTGAGCGAGGAGCCACCGGCGGAGCCGCAACGGGGTCGGTGCCGATTTGATGGGACGGGCCCGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CCA 72 bp | GCCGCCGCTGCCAGAGCCACCTTTCGCTACCCGCGGTaGGTCCCAGTCAATGCCCCTTTCTCTCTCCTATTG | + |
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Preference number: 6 (lower is better) Translates to: AAAARATFRYPR*VPVNAPFSLLL Trigger: CAATAGGAGAGAGAAAGGGGCATTGACTGGGACCCACCGCGGGTAGCGAAAGGTGGCTCTGGCAGCGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000556878.1 |
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| CDS CAA 72 bp | AAGCTTCTGGGGAAGAATCCAAAGATGATCTGTGGCTaGGAGGGGCGGGAGACGGGCGAGGTGGCCGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: KLLGKNPKMICG*EGRETGEVAAA Trigger: CGCTGCGGCCACCTCGCCCGTCTCCCGCCCCTCCAAGCCACAGATCATCTTTGGATTCTTCCCCAGAAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS CCA 72 bp | CTTGAAGCTTCTGGGGAAGAATCCAAAGATGATCTGTaGCTTGGAGGGGCGGGAGACGGGCGAGGTGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LEASGEESKDDL*LGGAGDGRGGR Trigger: GCGGCCACCTCGCCCGTCTCCCGCCCCTCCAAGCCACAGATCATCTTTGGATTCTTCCCCAGAAGCTTCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS TCA 72 bp | CCTTTCTCTCTCCTATTGTCAATATCACCGGGCGGCTaGGTCCATGGCACACGCGCAACCGAACCTTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PFSLLLSISPGG*VHGTRATEPSG Trigger: GCCAGAAGGTTCGGTTGCGCGTGTGCCATGGACTCAGCCGCCCGGTGATATTGACAATAGGAGAGAGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000337537.8 ENST00000556878.1 |
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| CDS GCA 72 bp | AGCCACCTTTCGCTACCCGCGGTGGGTCCCAGTCAATaGCCCTTTCTCTCTCCTATTGTCAATATCACCGGG | + |
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Preference number: 6 (lower is better) Translates to: SHLSLPAVGPSQ*PFLSPIVNITG Trigger: CCCGGTGATATTGACAATAGGAGAGAGAAAGGGGCATTGACTGGGACCCACCGCGGGTAGCGAAAGGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000556878.1 |
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| CDS GCA 72 bp | GCTTCCCCACCCTGCAAAGCCCATCCCCAAATAGCGTaGACTCTCCAGCTCCAAGATCTTCTGGGATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: ASPPCKAHPQIA*TLQLQDLLGCQ Trigger: TTGGCATCCCAGAAGATCTTGGAGCTGGAGAGTGCACGCTATTTGGGGATGGGCTTTGCAGGGTGGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS GCA 72 bp | AAAGCCAGGCAGATGTTCCGCAGTACACAGAGAGTGTaGCAGATCCTGCAATGGACTCCTCAACGATGCACT | + |
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Preference number: 6 (lower is better) Translates to: KARQMFRSTQRV*QILQWTPQRCT Trigger: AGTGCATCGTTGAGGAGTCCATTGCAGGATCTGGCACACTCTCTGTGTACTGCGGAACATCTGCCTGGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 72 bp | TGGGGGAGGCTGTGCTTGTGCAGGGACAGGGGCATATaGGAAATCTCTGTACTTTCCTCTCAATTGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: WGRLCLCRDRGI*EISVLSSQLCC Trigger: ACAGCACAATTGAGAGGAAAGTACAGAGATTTCTCATATGCCCCTGTCCCTGCACAAGCACAGCCTCCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS CCA 72 bp | TTCCGCAGTACACAGAGAGTGTGCCAGATCCTGCAATaGACTCCTCAACGATGCACTGACCTTAAGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: FRSTQRVCQILQ*TPQRCTDLKDL Trigger: GAGATCCTTAAGGTCAGTGCATCGTTGAGGAGTCCATTGCAGGATCTGGCACACTCTCTGTGTACTGCGGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 72 bp | AGCAGCGGCAGAGGTGTTAACTCAATAGGCTTGCCTTaGGACCTAAACTGTGAGGAACTTTGCGACCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSGRGVNSIGLP*DLNCEELCDLF Trigger: GAAGAGGTCGCAAAGTTCCTCACAGTTTAGGTCTCAAGGCAAGCCTATTGAGTTAACACCTCTGCCGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS TCA 72 bp | GTGAGGAACTTTGCGACCTCTTCTGTCTGGCTTTTCTaGCGGACTTCCGAGAAAATCCGTCTACTTTATCCA | + |
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Preference number: 6 (lower is better) Translates to: VRNFATSSVWLF*RTSEKIRLLYP Trigger: TGGATAAAGTAGACGGATTTTCTCGGAAGTCCGTCAGAAAAGCCAGACAGAAGAGGTCGCAAAGTTCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000337537.8 ENST00000553266.5 ENST00000555899.1 ENST00000556878.1 |
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| CDS TCA 72 bp | AGCGTGTCCATGAAGTCAAAAATGACACAGCACTGCTaGAGTTTCTTTAGGAACAGTTCAGGCTGCTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SVSMKSKMTQHC*SFFRNSSGCSE Trigger: CTCAGAGCAGCCTGAACTGTTCCTAAAGAAACTTCAGCAGTGCTGTGTCATTTTTGACTTCATGGACACGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000337537.8 ENST00000422769.6 ENST00000555899.1 ENST00000556484.5 ENST00000556878.1 |
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| CDS GCA 72 bp | CCCTGTAAGGTAAAATCACACCTGGTTGAGAAGCACTaGTCAAGAGCCACACGGTCATCTTTAACCTACAAA | + |
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Preference number: 6 (lower is better) Translates to: PCKVKSHLVEKH*SRATRSSLTYK Trigger: TTTGTAGGTTAAAGATGACCGTGTGGCTCTTGAGCAGTGCTTCTCAACCAGGTGTGATTTTACCTTACAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS CAA 72 bp | CATGCTCTTCAAATTCTAGCACTGTGCCGACTACATTaGCTTAGCTCTCCAAAGGTTGGCTCTCATTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: HALQILALCRLH*LSSPKVGSHLW Trigger: CCACAAATGAGAGCCAACCTTTGGAGAGCTAAGCAAATGTAGTCGGCACAGTGCTAGAATTTGAAGAGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 72 bp | CAAAGGTTGGCTCTCATTTGTGGAGTTGACCTCCAATaGCCTCACTCTTGCAATATATACACCTGTGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: QRLALICGVDLQ*PHSCNIYTCES Trigger: TGACTCACAGGTGTATATATTGCAAGAGTGAGGTCATTGGAGGTCAACTCCACAAATGAGAGCCAACCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 72 bp | CTTAGCTCTCCAAAGGTTGGCTCTCATTTGTGGAGTTaGCCTCCAATGACCTCACTCTTGCAATATATACAC | + |
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Preference number: 6 (lower is better) Translates to: LSSPKVGSHLWS*PPMTSLLQYIH Trigger: GTGTATATATTGCAAGAGTGAGGTCATTGGAGGTCAACTCCACAAATGAGAGCCAACCTTTGGAGAGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS CCA 72 bp | AAGTGGAGCACAGAGGATTTTCAGGGCAGTGATGTATaGTATGTATGGTACTATAATGGTGGATACATGTCA | + |
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Preference number: 6 (lower is better) Translates to: KWSTEDFQGSDV*YVWYYNGGYMS Trigger: TGACATGTATCCACCATTATAGTACCATACATACCATACATCACTGCCCTGAAAATCCTCTGTGCTCCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 72 bp | CAGATGACCTTCATTATTTCAGTCACAGTCTCACGCTaGGATCATTCAAGTGCCTTTGCAAATCTGAACTAT | + |
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Preference number: 6 (lower is better) Translates to: QMTFIISVTVSR*DHSSAFANLNY Trigger: ATAGTTCAGATTTGCAAAGGCACTTGAATGATCTCAGCGTGAGACTGTGACTGAAATAATGAAGGTCATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 72 bp | ATAGAACTGAGGAATATATTGGGCATCGTTTTCAGATaGCCTTCATTATTTCAGTCACAGTCTCACGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: IELRNILGIVFR*PSLFQSQSHAE Trigger: CTCAGCGTGAGACTGTGACTGAAATAATGAAGGTCATCTGAAAACGATGCCCAATATATTCCTCAGTTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 72 bp | GTCAAAGAAGCCCATCTGAAAAGAGTACATGCTGTATaGTTCCAACTATATGACAGTCTGGAAAAAGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: VKEAHLKRVHAV*FQLYDSLEKAK Trigger: TTTTGCTTTTTCCAGACTGTCATATAGTTGGAATCATACAGCATGTACTCTTTTCAGATGGGCTTCTTTGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS GCA 72 bp | GTAGTTAAAGTTCTGGATTTCGTTCTCATGAAATCATaGTCTTCAAATTCTAGCACTGTGCCGACTACATTT | + |
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Preference number: 6 (lower is better) Translates to: VVKVLDFVLMKS*SSNSSTVPTTF Trigger: AAATGTAGTCGGCACAGTGCTAGAATTTGAAGAGCATGATTTCATGAGAACGAAATCCAGAACTTTAACTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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| CDS TCA 72 bp | TCTCACGCTGAGATCATTCAAGTGCCTTTGCAAATCTaGACTATCATTTTTAAACATATCTACTCCATCACA | + |
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Preference number: 6 (lower is better) Translates to: SHAEIIQVPLQI*TIIFKHIYSIT Trigger: TGTGATGGAGTAGATATGTTTAAAAATGATAGTTCAGATTTGCAAAGGCACTTGAATGATCTCAGCGTGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000556878.1 |
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