RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP2R5D (Homo sapiens)

Ensembl gene IDs: ENSG00000112640

Ensembl transcript IDs: ENST00000230402.10, ENST00000394110.7, ENST00000470467.5, ENST00000472118.5, ENST00000482315.1, ENST00000485511.6, ENST00000676174.1

Found 564 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGCTGTGGCCCTGTGGTAGGAACGTGAGGGGTCAGAGAGCCTCCTaGCTGGCAGTTAGGAACTCTTCCGCCCGCTTGTGCGCCTCCAGT +
Preference number: 1 (lower is better)
Translates to: GLWPCGRNVRGQRAS*LAVRNSSARLCASS
Trigger: ACTGGAGGCGCACAAGCGGGCGGAAGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTGACCCCTCACGTTCCTACCACAGGGCCACAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR GCA 90 bp CAGAGAGCCTCCTGGCTGGCAGTTAGGAACTCTTCCGCCCGCTTGTaGGCCTCCAGTGCCTTGATGGTGTACACGTCCTGGGGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: QRASWLAVRNSSARL*ASSALMVYTSWGSS
Trigger: GGAGCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR TCA 90 bp TGGCAGTTAGGAACTCTTCCGCCCGCTTGTGCGCCTCCAGTGCCTTaGTGGTGTACACGTCCTGGGGCAGCTCCGACTTCCTCCGCAGCA +
Preference number: 1 (lower is better)
Translates to: WQLGTLPPACAPPVP*WCTRPGAAPTSSAA
Trigger: TGCTGCGGAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTTCCTAACTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR TCA 90 bp CATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCCTTaGGTAGCTAGAGAGGCGCTGCCTTCCCCCAAGACAGCCAGTAGG +
Preference number: 1 (lower is better)
Translates to: HSVGVPASSAHIPLP*VAREALPSPKTASR
Trigger: CCTACTGGCTGTCTTGGGGGAAGGCAGCGCCTCTCTAGCTACTCAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR CCA 90 bp CCTCAGTCTCCACAGTCCTCTTCAGAAGCTGGATGTCCTCAGCTGTaGGGGTCTCTGTCTCCATCGAGTACACAGGGGGCAGTGGTGGAG +
Preference number: 1 (lower is better)
Translates to: PQSPQSSSEAGCPQL*GSLSPSSTQGAVVE
Trigger: CTCCACCACTGCCCCCTGTGTACTCGATGGAGACAGAGACCCCCACAGCTGAGGACATCCAGCTTCTGAAGAGGACTGTGGAGACTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR CCA 90 bp GTTCCCTACATGCCTCTGCAGGGGAGAGAGAGGAGGGGAGATACCTaGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTA +
Preference number: 1 (lower is better)
Translates to: VPYMPLQGRERRGDT*RSNEDEGKNRGAYV
Trigger: TACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATCTCCCCTCCTCTCTCTCCCCTGCAGAGGCATGTAGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR GCA 90 bp CATAACTTTGGTGAGAATAATCTCCTGCTGTTCCCTACATGCCTCTaGAGGGGAGAGAGAGGAGGGGAGATACCTGGCGTTCAAATGAGG +
Preference number: 1 (lower is better)
Translates to: HNFGENNLLLFPTCL*RGERGGEIPGVQMR
Trigger: CCTCATTTGAACGCCAGGTATCTCCCCTCCTCTCTCTCCCCTGCAGAGGCATGTAGGGAACAGCAGGAGATTATTCTCACCAAAGTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR CCA 90 bp AGAATCTCCTCCAGCTCATTCAAGAACATCACCTCCTTGGGGCTGTaGGTCTTGGGCCAAAACTTGAGAAGTCCCACAATTACCGGCTCA +
Preference number: 1 (lower is better)
Translates to: RISSSSFKNITSLGL*VLGQNLRSPTITGS
Trigger: TGAGCCGGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGACCCACAGCCCCAAGGAGGTGATGTTCTTGAATGAGCTGGAGGAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR CAA 90 bp CTGGCAGTTAGGAACTCTTCCGCCCGCTTGTGCGCCTCCAGTGCCTaGATGGTGTACACGTCCTGGGGCAGCTCCGACTTCCTCCGCAGC +
Preference number: 2 (lower is better)
Translates to: LAVRNSSARLCASSA*MVYTSWGSSDFLRS
Trigger: GCTGCGGAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTTCCTAACTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR CAA 90 bp GGTCAGAGAGCCTCCTGGCTGGCAGTTAGGAACTCTTCCGCCCGCTaGTGCGCCTCCAGTGCCTTGATGGTGTACACGTCCTGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: GQRASWLAVRNSSAR*CASSALMVYTSWGS
Trigger: GCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR GCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTTGTCCCTGCTTCAAGTaGCCACATCCCCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLCPCFK*PHPPPL
Trigger: CAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACA...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCTTGTACCACACAGTATaGCAGCTGAGGGTGGTAGAC +
Preference number: 2 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLLYHTV*QLRVVD
Trigger: GTCTACCACCCTCAGCTGGCATACTGTGTGGTACAA...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR TCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCCCCTGTGGGATTCGATaGAGGTGGCAGCGTCCGGAA +
Preference number: 2 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPPCGIR*RWQRPE
Trigger: TTCCGGACGCTGCCACCTTCATCGAATCCCACAGGG...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCGTAGGGAGCAGAGTATaGAGGGCCAGGGCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPVGSRV*RARAVS
Trigger: GGACACTGCCCTGGCCCTCCATACTCTGCTCCCTAC...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTGTCCCTGCTTCAAGTaGCCACATCCCCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPCPCFK*PHPPPL
Trigger: CAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACA...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCCTGCTGTTCCCTACATaGCTCTGCAGGGGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPLLFPT*LCRGER
Trigger: TCTCTCTCCCCTGCAGAGGCATGTAGGGAACAGCAG...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CCA 90 bp GTACACGTCCTGGGGCAGCTCCGACTTCCTCCGCAGCAGCACTTTCTCCTTCTTAAGCAGCTTCCAGGGTaGGCTCATCTTCCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: VHVLGQLRLPPQQHFLLLKQLPG*AHLPLG
Trigger: ACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTT...AAGAAGGAGAAAGTGCTGCTGCGGAGGAAGTCGGAGCTGCCCCAGGACGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCAGAACATCACCTCCTTaGGGCTGTGGGTCTTGGGCC +
Preference number: 2 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSRTSPP*GCGSWA
Trigger: GGCCCAAGACCCACAGCCCCAAGGAGGTGATGTTCT...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCGGTCAGAGAGCCTCCTaGCTGGCAGTTAGGAACTCT +
Preference number: 2 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPGQRAS*LAVRNS
Trigger: AGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTGACC...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR TCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACACATCCCCCTCCCTTaGGTAGCTAGAGAGGCGCTG +
Preference number: 2 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVHIPLP*VAREAL
Trigger: CAGCGCCTCTCTAGCTACTCAAGGGAGGGGGATGTG...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCGGAGTTCCTGTAGAGTaGAGGGAACATGATGGGGAG +
Preference number: 2 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPGVPVE*REHDGE
Trigger: CTCCCCATCATGTTCCCTGCACTCTACAGGAACTCC...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR TCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCATCACGGCTATGGGTaGTGTACTCCACCATCTCGT +
Preference number: 2 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLHHGYG*CTPPSR
Trigger: ACGAGATGGTGGAGTACATCACCCATAGCCGTGATG...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR TCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAACACATCCCCCTCCCTTaGGTAGCTAGAGAGGCGCTG +
Preference number: 2 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKEHIPLP*VAREAL
Trigger: CAGCGCCTCTCTAGCTACTCAAGGGAGGGGGATGTG...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR TCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCATACTTTTCTCCTTTTaGCCTCCCTTGGTCAGGCAT +
Preference number: 2 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPILFSF*PPLVRH
Trigger: ATGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTAT...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTTCTGTGGGTGTCCCTaGTTCAAGTGCCCACATCCC +
Preference number: 2 (lower is better)
Translates to: STNKEINRCWQEPCLGHRFCGCP*FKCPHP
Trigger: GGGATGTGGGCACTTGAAGCAGGGACACCCACAGAA...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACACAAACTCAGCCCCTGTaGGATTCGATGAAGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTQTQPL*DSMKVA
Trigger: TGCCACCTTCATCGAATCCCACAGGGGCTGAGTTTG...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCTTGGCTATGTTTGGCTaGAAATCAGGAGACTCAAGG +
Preference number: 2 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPLAMFG*KSGDSR
Trigger: CCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAA...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTACAACATCACGGCTATaGGTGATGTACTCCACCATC +
Preference number: 2 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFTTSRL*VMYSTI
Trigger: GATGGTGGAGTACATCACCCATAGCCGTGATGTTGT...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCGTAGGGAGCAGAGTATaGAGGGCCAGGGCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: THLSMYHSVENKAPYVHSVGSRV*RARAVS
Trigger: GGACACTGCCCTGGCCCTCCATACTCTGCTCCCTAC...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTAGGCATGAACACCTTTTaGGGAGAAGAGGGACCATTC +
Preference number: 2 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVGMNTF*GEEGPF
Trigger: GAATGGTCCCTCTTCTCCCCAAAAGGTGTTCATGCC...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR TCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCCCGGAAGAGGTTCACTaGAAACATGGTGACAGCCTC +
Preference number: 2 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTAPEEVH*KHGDSL
Trigger: GAGGCTGTCACCATGTTTTCAGTGAACCTCTTCCGG...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR TCA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTATACTTTTCTCCTTTTaGCCTCCCTTGGTCAGGCAT +
Preference number: 2 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFILFSF*PPLVRH
Trigger: ATGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTAT...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCTGTCCCTGCTTCAAGTaGCCACATCCCCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: THLSMYHSVENKAPYVHSCPCFK*PHPPPL
Trigger: CAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACA...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAACTGCTGTTCCCTACATaGCTCTGCAGGGGAGAGAGA +
Preference number: 2 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKELLFPT*LCRGER
Trigger: TCTCTCTCCCCTGCAGAGGCATGTAGGGAACAGCAG...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR TCA 90 bp TTCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCATCACTGAAAACATGGTaGCAGCCTCAGGGTAAATGG +
Preference number: 2 (lower is better)
Translates to: FLHSEPALLLLCLVLLCASLKTW*QPQGKW
Trigger: CCATTTACCCTGAGGCTGTCACCATGTTTTCAGTGA...TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR GCA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCTTCTGTGGGTGTCCCTaGTTCAAGTGCCCACATCCC +
Preference number: 2 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFFCGCP*FKCPHP
Trigger: GGGATGTGGGCACTTGAAGCAGGGACACCCACAGAA...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCTCCCTTCAGCTACTCTaGGACCAATGGGGCTTGACA +
Preference number: 2 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGSLQLL*DQWGLT
Trigger: TGTCAAGCCCCATTGGTCCCAGAGTAGCTGAAGGGA...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGGGAGCCCCAAAAACTTaGCATAGATGCGATGCAAAA +
Preference number: 2 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLGAPKT*HRCDAK
Trigger: TTTTGCATCGCATCTATGGCAAGTTTTTGGGGCTCC...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTGGGCTCATCTTCCTCTaGGTCAAACTCAGCCCCTGT +
Preference number: 2 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPGLIFL*VKLSPC
Trigger: ACAGGGGCTGAGTTTGACCCAGAGGAAGATGAGCCC...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR TCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACAGCCACAGGGAGGCATaGACACCTTTTGGGGAGAAG +
Preference number: 2 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDSHREA*TPFGEK
Trigger: CTTCTCCCCAAAAGGTGTTCATGCCTCCCTGTGGCT...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAAGTGAGAATAATCTCCTaGTGTTCCCTACATGCCTCT +
Preference number: 2 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKEVRIIS*CSLHAS
Trigger: AGAGGCATGTAGGGAACAGCAGGAGATTATTCTCAC...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCACTGGCGTAGCTTCTaGATAAACAGCTCCTCCCGC +
Preference number: 2 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDHWRSF*INSSSR
Trigger: GCGGGAGGAGCTGTTTATCCAGAAGCTACGCCAGTG...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCAGAGGGACCATTCTGTaGGTGTCCCTGCTTCAAGTG +
Preference number: 2 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTRGTIL*VSLLQV
Trigger: CACTTGAAGCAGGGACACCCACAGAATGGTCCCTCT...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACAGAGGGACCATTCTGTaGGTGTCCCTGCTTCAAGTG +
Preference number: 2 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYRGTIL*VSLLQV
Trigger: CACTTGAAGCAGGGACACCCACAGAATGGTCCCTCT...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCCCACTTGGTCCATCTaGGCCCTATATTCATCAGTT +
Preference number: 2 (lower is better)
Translates to: THLSMYHSVENKAPYVHSPTWSI*ALYSSV
Trigger: AACTGATGAATATAGGGCCCAGATGGACCAAGTGGG...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR TCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACCATCCCCAGGTTGTCTaGGCACTAAGCATCTTAGTG +
Preference number: 2 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYHPQVV*ALSILV
Trigger: CACTAAGATGCTTAGTGCTCAGACAACCTGGGGATG...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR GCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCATGAGGAACATCTTGTaGTCTTCTTTAAGGGGCAGG +
Preference number: 2 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGMRNIL*SSLRGR
Trigger: CCTGCCCCTTAAAGAAGAGCACAAGATGTTCCTCAT...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR GCA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCGCCCTTCTGCTTCTCTaGCTTGTATTGTTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFALLLL*LVLLCA
Trigger: TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGC...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACAGAGGGACCATTCTGTaGGTGTCCCTGCTTCAAGTG +
Preference number: 2 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDRGTIL*VSLLQV
Trigger: CACTTGAAGCAGGGACACCCACAGAATGGTCCCTCT...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCGCAAGTACAAACTTCTaGTCGATGTACTTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: THLSMYHSVENKAPYVHSASTNF*SMYFLA
Trigger: AGCCAAGAAGTACATCGACCAGAAGTTTGTACTTGC...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACGGCATGAACACCTTTTaGGGAGAAGAGGGACCATTC +
Preference number: 2 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDGMNTF*GEEGPF
Trigger: GAATGGTCCCTCTTCTCCCCAAAAGGTGTTCATGCC...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR TCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTAAATGGCCTCAGTaGCAACATCACGGCTATGGG +
Preference number: 2 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLGKWPQ*QHHGYG
Trigger: CCCATAGCCGTGATGTTGTCACTGAGGCCATTTACC...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACGGTCGATGTACTTCTTaGCTATGTTTGGCTGGAAAT +
Preference number: 2 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDGRCTS*LCLAGN
Trigger: ATTTCCAGCCAAACATAGCCAAGAAGTACATCGACC...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR TCA 72 bp GGAACTCTTCCGCCCGCTTGTGCGCCTCCAGTGCCTTaGTGGTGTACACGTCCTGGGGCAGCTCCGACTTCC +
Preference number: 3 (lower is better)
Translates to: GTLPPACAPPVP*WCTRPGAAPTS
Trigger: GGAAGTCGGAGCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR TCA 72 bp GGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCCTTaGGTAGCTAGAGAGGCGCTGCCTTCCCCCAAGACA +
Preference number: 3 (lower is better)
Translates to: GVPASSAHIPLP*VAREALPSPKT
Trigger: TGTCTTGGGGGAAGGCAGCGCCTCTCTAGCTACTCAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR GCA 72 bp AATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTaGCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: NKAPYVHSQKPH*LRPWNLGPAFL
Trigger: GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CAA 90 bp TGCGCCTCCAGTGCCTTGATGGTGTACACGTCCTGGGGCAGCTCCGACTTCCTCACTTCTTGGCTATGTTaGGCTGGAAATCAGGAGACT +
Preference number: 3 (lower is better)
Translates to: CASSALMVYTSWGSSDFLTSWLC*AGNQET
Trigger: AGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGT...GAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR GCA 72 bp GGTGAGAATAATCTCCTGCTGTTCCCTACATGCCTCTaGAGGGGAGAGAGAGGAGGGGAGATACCTGGCGTT +
Preference number: 3 (lower is better)
Translates to: GENNLLLFPTCL*RGERGGEIPGV
Trigger: AACGCCAGGTATCTCCCCTCCTCTCTCTCCCCTGCAGAGGCATGTAGGGAACAGCAGGAGATTATTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CAA 90 bp CAGAATCTCCTCCAGCTCATTCAAGAACATCACCTCCTTGGGGCTGTGGGTCTTGGCAGGGCAAAGCCATaGATGATGCTGCCCAGGATC +
Preference number: 3 (lower is better)
Translates to: QNLLQLIQEHHLLGAVGLGRAKP*MMLPRI
Trigger: GATCCTGGGCAGCATCATCAATGGCTTTGCCCTGCC...AAGACCCACAGCCCCAAGGAGGTGATGTTCTTGAATGAGCTGGAGGAGATTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CAA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCTTCACCTCCTTGAATTaGAGGTCACTGAGTGGGTCT +
Preference number: 3 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFFTSLN*RSLSGS
Trigger: AGACCCACTCAGTGACCTCAAATTCAAGGAGGTGAA...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CAA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCTGGTCGATGTACTTCTaGGCTATGTTTGGCTGGAAA +
Preference number: 3 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSWSMYF*AMFGWK
Trigger: TTTCCAGCCAAACATAGCCAAGAAGTACATCGACCA...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CAA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCGGGCTTGACATAACTTaGGTGAGAATAATCTCCTGC +
Preference number: 3 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPGLDIT*VRIISC
Trigger: GCAGGAGATTATTCTCACCAAAGTTATGTCAAGCCC...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR CCA 72 bp ATGCCTCTGCAGGGGAGAGAGAGGAGGGGAGATACCTaGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGA +
Preference number: 3 (lower is better)
Translates to: MPLQGRERRGDT*RSNEDEGKNRG
Trigger: TCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATCTCCCCTCCTCTCTCTCCCCTGCAGAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CAA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAAGGGGTTCCATCACTTaGCTGAACTCAGAAGGTTCA +
Preference number: 3 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRRGSIT*LNSEGS
Trigger: TGAACCTTCTGAGTTCAGCAAAGTGATGGAACCCCT...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR CCA 72 bp GTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTaGGCCCTATATTCATCAGTTATTGTCCACAGCCTA +
Preference number: 3 (lower is better)
Translates to: VYSSLPGPTWSI*ALYSSVIVHSL
Trigger: TAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR-3UTR CAA 90 bp TCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAGGTCTTGGGCCAAAACTaGAGAAGTCCCACAATTACC +
Preference number: 3 (lower is better)
Translates to: SFIRNRPFCFSALYCCVQVLGQN*RSPTIT
Trigger: GGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGAC...CTGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR CCA 72 bp TCCAGCTCATTCAAGAACATCACCTCCTTGGGGCTGTaGGTCTTGGGCCAAAACTTGAGAAGTCCCACAATT +
Preference number: 3 (lower is better)
Translates to: SSSFKNITSLGL*VLGQNLRSPTI
Trigger: AATTGTGGGACTTCTCAAGTTTTGGCCCAAGACCCACAGCCCCAAGGAGGTGATGTTCTTGAATGAGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CAA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCAGTCCATGGATTGTCTaGTTCCAGTGGCTCTTGGAG +
Preference number: 3 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGSPWIV*FQWLLE
Trigger: CTCCAAGAGCCACTGGAACAAGACAATCCATGGACT...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CAA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCCGGATGAGGAACATCTaGTGCTCTTCTTTAAGGGGC +
Preference number: 3 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTRMRNI*CSSLRG
Trigger: GCCCCTTAAAGAAGAGCACAAGATGTTCCTCATCCG...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR-3UTR CAA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCTATACTTTTCTCCTTTaGACCTCCCTTGGTCAGGCA +
Preference number: 3 (lower is better)
Translates to: THLSMYHSVENKAPYVHSYTFLL*TSLGQA
Trigger: TGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATA...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR CCA 72 bp AACTTCTGGTCGATGTACTTCTTGGCTATGTTTGGCTaGAAATCAGGAGACTCAAGGAAACGTAAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: NFWSMYFLAMFG*KSGDSRKRKKN
Trigger: GTTCTTCTTACGTTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACATCGACCAGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCTGCGCCCCTGGAACCTaGGTCCGGCCTTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLCAPGT*VRPSSA
Trigger: GGCTGAGGAAGGCCGGACCCAGGTTCCAGGGGCGCA...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTTGCGCCCCTGGAACCTaGGTCCGGCCTTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLCAPGT*VRPSSA
Trigger: GGCTGAGGAAGGCCGGACCCAGGTTCCAGGGGCGCA...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTGGGGCGGCGTGCTATTaGTGGGACGCTTGTTGGATG +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLGAACY*WDACWM
Trigger: CATCCAACAAGCGTCCCAGCAATAGCACGCCGCCCC...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCTCCCCGGCCCCACTTaGTCCATCTGGGCCCTATAT +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLLPGPT*SIWALY
Trigger: ATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAG...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCGGCTGGGGCTGCGGCTaGGCCTCCTCAGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPGWGCG*ASSVFS
Trigger: CGAGAACACTGAGGAGGCCCAGCCGCAGCCCCAGCC...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394110.7
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTGCGGCGTGCTATTGCTaGGACGCTTGTTGGATGACG +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLAACYC*DACWMT
Trigger: CGTCATCCAACAAGCGTCCCAGCAATAGCACGCCGC...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTAGAACATCACCTCCTTaGGGCTGTGGGTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLRTSPP*GCGSWA
Trigger: GGCCCAAGACCCACAGCCCCAAGGAGGTGATGTTCT...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCGGCAGGAGCCATGCTTaGGGCACCGCTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSGRSHA*GTAPCF
Trigger: GAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCC...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR CAA 72 bp AGGAACTCTTCCGCCCGCTTGTGCGCCTCCAGTGCCTaGATGGTGTACACGTCCTGGGGCAGCTCCGACTTC +
Preference number: 4 (lower is better)
Translates to: RNSSARLCASSA*MVYTSWGSSDF
Trigger: GAAGTCGGAGCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
3UTR CAA 72 bp GCCTCCTGGCTGGCAGTTAGGAACTCTTCCGCCCGCTaGTGCGCCTCCAGTGCCTTGATGGTGTACACGTCC +
Preference number: 4 (lower is better)
Translates to: ASWLAVRNSSAR*CASSALMVYTS
Trigger: GGACGTGTACACCATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTTCCTAACTGCCAGCCAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR TCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCTTGGATGACGGTGGCTaGGACTGGGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPLDDGG*DWAWGW
Trigger: CCAGCCCCAAGCCCAGTCTCAGCCACCGTCATCCAA...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GCTCTTGGAGTTCCTGTAGAGTGCAGGGAACATGATGGGGAGGACTCGGGCAGCGGGACGCTTGTTGGATaGCGGTGGCTGAGACTGGGC +
Preference number: 4 (lower is better)
Translates to: ALGVPVECREHDGEDSGSGTLVG*RWLRLG
Trigger: GCCCAGTCTCAGCCACCGTCATCCAACAAGCGTCCC...GCTGCCCGAGTCCTCCCCATCATGTTCCCTGCACTCTACAGGAACTCCAAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR TCA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGGCGCCTCCAGTGCCTTaGTGGTGTACACGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRAPPVP*WCTRPG
Trigger: CCCAGGACGTGTACACCATCAAGGCACTGGAGGCGC...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTAGGGCAGGAAGCTTCTaGAGCTCCCGATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLRAGSF*SSRFLL
Trigger: CAGCAAGAATCGGGAGCTGCAGAAGCTTCCTGCCCT...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCGGCTGGGGCTGCGGCTaGGCCTGGTCAAACAAGTCA +
Preference number: 4 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPGWGCG*AWSNKS
Trigger: TGACTTGTTTGACCAGGCCCAGCCGCAGCCCCAGCC...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCGCACACGGCTGGGACTaGGGGGCCTATTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSAHGWD*GAYLCC
Trigger: GCAGCACAAATAGGCCCCCCAGTCCCAGCCGTGTGC...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCTGCGCCCCTGGAACCTaGGTCCGGCCTTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TPFGEKRDHSVGVPASSACAPGT*VRPSSA
Trigger: GGCTGAGGAAGGCCGGACCCAGGTTCCAGGGGCGCA...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATGCGCCCCTGGAACCTaGGTCCGGCCTTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: LLGRRGTILWVSLLQVPTCAPGT*VRPSSA
Trigger: GGCTGAGGAAGGCCGGACCCAGGTTCCAGGGGCGCA...TGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCTCAGTTCTGTACATATaGGGACATCGGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLSVLYI*GHRSKP
Trigger: GGGCTTGGACCGATGTCCCCATATGTACAGAACTGA...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTTTGGATGACGGTGGCTaGGACTGGGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSLDDGG*DWAWGW
Trigger: CCAGCCCCAAGCCCAGTCTCAGCCACCGTCATCCAA...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCGGAAGAGGTTCACTaGAAACATGGTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLPEEVH*KHGDSL
Trigger: GAGGCTGTCACCATGTTTTCAGTGAACCTCTTCCGG...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCCCTGTGGGATTCGATaGAGGTGGCAGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPPCGIR*RWQRPE
Trigger: TTCCGGACGCTGCCACCTTCATCGAATCCCACAGGG...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTGATGCAAAATGGTCTTaGGGAAGTCCCGCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLDAKWS*GSPALE
Trigger: CTCGAGAGCGGGACTTCCTCAAGACCATTTTGCATC...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCACATCCCCCTCCCTTaGGTAGCTAGAGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSHIPLP*VAREAL
Trigger: CAGCGCCTCTCTAGCTACTCAAGGGAGGGGGATGTG...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCCACATCCCCCTCCCTTaGGTAGCTAGAGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSHIPLP*VAREAL
Trigger: CAGCGCCTCTCTAGCTACTCAAGGGAGGGGGATGTG...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGGGGGCGGCGTGCTATTaGTGGGACGCTTGTTGGATG +
Preference number: 4 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRGAACY*WDACWM
Trigger: CATCCAACAAGCGTCCCAGCAATAGCACGCCGCCCC...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCTTCCGCCCGCTTGTaGGCCTCCAGTGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPSSARL*ASSALM
Trigger: CATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGA...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCTCTTCCGCCCGCTTGTaGGCCTCCAGTGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSSSARL*ASSALM
Trigger: CATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGA...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCAGCCAAAAGCCGCACTaGCTGCGCCCCTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFSQKPH*LRPWNL
Trigger: CAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCT...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGCTCTTCGCCACCGCCTaGGCGCTGCGCCCGGGTCGA +
Preference number: 4 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLLFATA*ALRPGR
Trigger: TCGACCCGGGCGCAGCGCGCAGGCGGTGGCGAAGAG...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394110.7
ENST00000472118.5
CDS-3UTR GCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCCTCTTCGCCACCGCCTaGGCGCTGCGCCCGGGTCGA +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPLFATA*ALRPGR
Trigger: TCGACCCGGGCGCAGCGCGCAGGCGGTGGCGAAGAG...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394110.7
ENST00000472118.5
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCAAACTCAGCCCCTGTaGGATTCGATGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLQTQPL*DSMKVA
Trigger: TGCCACCTTCATCGAATCCCACAGGGGCTGAGTTTG...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTCACAGGGGGCAGTGGTaGAGGGGCTCGGAACATGGG +
Preference number: 4 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFHRGQW*RGSEHG
Trigger: CCCATGTTCCGAGCCCCTCCACCACTGCCCCCTGTG...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCGTACACAGGGGGCAGTaGTGGAGGGGCTCGGAACAT +
Preference number: 4 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSVHRGQ*WRGSEH
Trigger: ATGTTCCGAGCCCCTCCACCACTGCCCCCTGTGTAC...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTGTACACAGGGGGCAGTaGTGGAGGGGCTCGGAACAT +
Preference number: 4 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSVHRGQ*WRGSEH
Trigger: ATGTTCCGAGCCCCTCCACCACTGCCCCCTGTGTAC...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCCTCCCCGGCCCCACTTaGTCCATCTGGGCCCTATAT +
Preference number: 4 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPLPGPT*SIWALY
Trigger: ATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAG...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCGCCTTCCTCAGCCCCTaGCCCCTCCAAGGTACCTAT +
Preference number: 4 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPAFLSP*PLQGTY
Trigger: ATAGGTACCTTGGAGGGGCCAGGGGCTGAGGAAGGC...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCACTGCCTGCGCCCCTaGAACCTGGGTCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLHCLRP*NLGPAF
Trigger: GAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTG...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCCCCTGTGGGATTCGATaGAGGTGGCAGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFPCGIR*RWQRPE
Trigger: TTCCGGACGCTGCCACCTTCATCGAATCCCACAGGG...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGCGCCTCCAGTGCCTTaGTGGTGTACACGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFAPPVP*WCTRPG
Trigger: CCCAGGACGTGTACACCATCAAGGCACTGGAGGCGC...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCGGAGCCCCAAAAACTTaGCATAGATGCGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLGAPKT*HRCDAK
Trigger: TTTTGCATCGCATCTATGGCAAGTTTTTGGGGCTCC...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCAAAAGCCGCACTGCCTaGGCCCCTGGAACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TPFGEKRDHSVGVPASSAKSRTA*APGTWV
Trigger: GACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTT...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCAGCTCCTCCCGCTCCTaGGTTGGCGAATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPSSSRS*VGESFR
Trigger: CCTGAAAGATTCGCCAACCCAGGAGCGGGAGGAGCT...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCACAGGGGGCAGTGGTaGAGGGGCTCGGAACATGGG +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLHRGQW*RGSEHG
Trigger: CCCATGTTCCGAGCCCCTCCACCACTGCCCCCTGTG...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCATGGTGTACACGTCCTaGGGCAGCTCCGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSMVYTS*GSSDFL
Trigger: GAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCAT...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCGTAGGGAGCAGAGTATaGAGGGCCAGGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFVGSRV*RARAVS
Trigger: GGACACTGCCCTGGCCCTCCATACTCTGCTCCCTAC...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTGGCATGAACACCTTTTaGGGAGAAGAGGGACCATTC +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLGMNTF*GEEGPF
Trigger: GAATGGTCCCTCTTCTCCCCAAAAGGTGTTCATGCC...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAGGCAGGAGCCATGCTTaGGGCACCGCTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRGRSHA*GTAPCF
Trigger: GAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCC...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCGCCTTCCTCAGCCCCTaGCCCCTCCAAGGTACCTAT +
Preference number: 4 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSAFLSP*PLQGTY
Trigger: ATAGGTACCTTGGAGGGGCCAGGGGCTGAGGAAGGC...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCATAGAGAGCACGCTCTaGCACCTGGAAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSIESTL*HLEMGA
Trigger: AGCCCCCATTTCCAGGTGGCAGAGCGTGCTCTCTAT...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCTTGTGCGCCTCCAGTaGCTTGATGGTGTACACGTC +
Preference number: 4 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSLVRLQ*LDGVHV
Trigger: GACGTGTACACCATCAAGGCACTGGAGGCGCACAAG...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGCTGCTGTTCCCTACATaGCTCTGCAGGGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRLLFPT*LCRGER
Trigger: TCTCTCTCCCCTGCAGAGGCATGTAGGGAACAGCAG...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTAGCCAAAAGCCGCACTaGCTGCGCCCCTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLSQKPH*LRPWNL
Trigger: CAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCT...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAAGCCAAAAGCCGCACTaGCTGCGCCCCTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRSQKPH*LRPWNL
Trigger: CAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCT...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCTGCTGGGACGCTTGTTaGATGACGGTGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSCWDAC*MTVAET
Trigger: AGTCTCAGCCACCGTCATCCAACAAGCGTCCCAGCA...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTACAACATCACGGCTATaGGTGATGTACTCCACCATC +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLTTSRL*VMYSTI
Trigger: GATGGTGGAGTACATCACCCATAGCCGTGATGTTGT...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCAAGCAGCTTCCAGGGTaGGCTCATCTTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPKQLPG*AHLPLG
Trigger: ACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTT...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCACCTCCTTGGGGCTGTaGGTCTTGGGCCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSTSLGL*VLGQNL
Trigger: CAAGTTTTGGCCCAAGACCCACAGCCCCAAGGAGGT...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCACCTCCTTGGGGCTGTaGGTCTTGGGCCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPTSLGL*VLGQNL
Trigger: CAAGTTTTGGCCCAAGACCCACAGCCCCAAGGAGGT...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGAACATCACCTCCTTaGGGCTGTGGGTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSRTSPP*GCGSWA
Trigger: GGCCCAAGACCCACAGCCCCAAGGAGGTGATGTTCT...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGTAGCTGTGGGTCACAGGGGGCAGTGGTaGAGGGGCTCGGAACATGGG +
Preference number: 4 (lower is better)
Translates to: ERMYSCVYFSEQPQVAVGHRGQW*RGSEHG
Trigger: CCCATGTTCCGAGCCCCTCCACCACTGCCCCCTGTG...ACCCACAGCTACCTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCAGAGAGCCTCCTGGCTaGCAGTTAGGAACTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPREPPG*QLGTLP
Trigger: CGGAAGAGTTCCTAACTGCCAGCCAGGAGGCTCTCT...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTACACGTCCTGGGGCAGCTCCGACTTCCTCCGCAGCAGCACTTTCTCCTTCTTGGTCAGAGAGCCTCCTaGCTGGCAGTTAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: VHVLGQLRLPPQQHFLLLGQRAS*LAVRNS
Trigger: AGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTGACC...AAGAAGGAGAAAGTGCTGCTGCGGAGGAAGTCGGAGCTGCCCCAGGACGTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTAGCACACGGCTGGGACTaGGGGGCCTATTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVAHGWD*GAYLCC
Trigger: GCAGCACAAATAGGCCCCCCAGTCCCAGCCGTGTGC...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTGAAATAAATAGGTGTTaGCAGGAGCCATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLEINRC*QEPCLG
Trigger: CCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCCACTGCCTGCGCCCCTaGAACCTGGGTCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPHCLRP*NLGPAF
Trigger: GAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTG...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGTAGCTGTGGGTTTGGATGACGGTGGCTaGGACTGGGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ERMYSCVYFSEQPQVAVGLDDGG*DWAWGW
Trigger: CCAGCCCCAAGCCCAGTCTCAGCCACCGTCATCCAA...ACCCACAGCTACCTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGGGTAAATGGCCTCAGTaGCAACATCACGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRGKWPQ*QHHGYG
Trigger: CCCATAGCCGTGATGTTGTCACTGAGGCCATTTACC...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCGCCTCCAGTGCCTTaGTGGTGTACACGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLAPPVP*WCTRPG
Trigger: CCCAGGACGTGTACACCATCAAGGCACTGGAGGCGC...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCAAGCGGGAGGAGCTTTaGCGTCGCTCCTTCTTGACA +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFKREEL*RRSFLT
Trigger: TGTCAAGAAGGAGCGACGGCAAAGCTCCTCCCGCTT...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230402.10
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGGGCAGGAAGCTTCTaGAGCTCCCGATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSRAGSF*SSRFLL
Trigger: CAGCAAGAATCGGGAGCTGCAGAAGCTTCCTGCCCT...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGCTCAGTCAGACTaGTCTCCTTCTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSPAQSD*SPSPGI
Trigger: AATTCCTGGAGAAGGAGAGCAGTCTGACTGAGCCGG...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGGGAGTTCCTGTAGAGTaGAGGGAACATGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRGVPVE*REHDGE
Trigger: CTCCCCATCATGTTCCCTGCACTCTACAGGAACTCC...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTGGAGTTCCTGTAGAGTaGAGGGAACATGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSGVPVE*REHDGE
Trigger: CTCCCCATCATGTTCCCTGCACTCTACAGGAACTCC...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGATCTTCCGCCCGCTTGTaGGCCTCCAGTGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRSSARL*ASSALM
Trigger: CATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGA...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTGTCCCTGCTTCAAGTaGCCACATCCCCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: EINRCWQEPCLGHRSLLPCPCFK*PHPPPL
Trigger: CAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACA...AGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CAGAATCTCCTCCAGCTCATTCAAGAACATCACCTCCTTGGGGCTGTGGGTCTTAGCCAAAAGCCGCACTaGCTGCGCCCCTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: QNLLQLIQEHHLLGAVGLSQKPH*LRPWNL
Trigger: CAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCT...AAGACCCACAGCCCCAAGGAGGTGATGTTCTTGAATGAGCTGGAGGAGATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCTGCTGGGACGCTTGTTaGATGACGGTGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSCWDAC*MTVAET
Trigger: AGTCTCAGCCACCGTCATCCAACAAGCGTCCCAGCA...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCGCGGCGTGCTATTGCTaGGACGCTTGTTGGATGACG +
Preference number: 4 (lower is better)
Translates to: TPFGEKRDHSVGVPASSAAACYC*DACWMT
Trigger: CGTCATCCAACAAGCGTCCCAGCAATAGCACGCCGC...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCCACAGGGGGCAGTGGTaGAGGGGCTCGGAACATGGG +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTAHRGQW*RGSEHG
Trigger: CCCATGTTCCGAGCCCCTCCACCACTGCCCCCTGTG...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAGTACACAGGGGGCAGTaGTGGAGGGGCTCGGAACAT +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRVHRGQ*WRGSEH
Trigger: ATGTTCCGAGCCCCTCCACCACTGCCCCCTGTGTAC...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CCCCTGTGGGATTCGATGAAGGTGGCAGCGTCCGGAAGAGGTTCACTGAAAACAATGGTGTACACGTCCTaGGGCAGCTCCGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: PLWDSMKVAASGRGSLKTMVYTS*GSSDFL
Trigger: GAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCAT...TGTTTTCAGTGAACCTCTTCCGGACGCTGCCACCTTCATCGAATCCCACAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAGTAGGGAGCAGAGTATaGAGGGCCAGGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRVGSRV*RARAVS
Trigger: GGACACTGCCCTGGCCCTCCATACTCTGCTCCCTAC...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGCACTGCCTGCGCCCCTaGAACCTGGGTCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: GRIEERMYSCVYFSEQPQHCLRP*NLGPAF
Trigger: GAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTG...CTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAACACTGCCTGCGCCCCTaGAACCTGGGTCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKEHCLRP*NLGPAF
Trigger: GAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTG...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCCATCACGGCTATGGGTaGTGTACTCCACCATCTCGT +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFHHGYG*CTPPSR
Trigger: ACGAGATGGTGGAGTACATCACCCATAGCCGTGATG...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTGGTAAATGGCCTCAGTaGCAACATCACGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSGKWPQ*QHHGYG
Trigger: CCCATAGCCGTGATGTTGTCACTGAGGCCATTTACC...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAGCCCTGTGGGATTCGATaGAGGTGGCAGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: SFIRNRPFCFSALYCCVQPCGIR*RWQRPE
Trigger: TTCCGGACGCTGCCACCTTCATCGAATCCCACAGGG...CTGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR TCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCGATGCAAAATGGTCTTaGGGAAGTCCCGCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFDAKWS*GSPALE
Trigger: CTCGAGAGCGGGACTTCCTCAAGACCATTTTGCATC...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCGCGCCTCCAGTGCCTTaGTGGTGTACACGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPAPPVP*WCTRPG
Trigger: CCCAGGACGTGTACACCATCAAGGCACTGGAGGCGC...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTGGAGTTCCTGTAGAGTaGAGGGAACATGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSGVPVE*REHDGE
Trigger: CTCCCCATCATGTTCCCTGCACTCTACAGGAACTCC...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCCTGCTGTTCCCTACATaGCTCTGCAGGGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PAPLGPSGPYIHQLLSTALLFPT*LCRGER
Trigger: TCTCTCTCCCCTGCAGAGGCATGTAGGGAACAGCAG...GGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCAAAAGCCGCACTGCCTaGGCCCCTGGAACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTAKSRTA*APGTWV
Trigger: GACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTT...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGAAAAGCCGCACTGCCTaGGCCCCTGGAACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLKSRTA*APGTWV
Trigger: GACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTT...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCCTCCCGCTCCTGGGTTaGCGAATCTTTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: STNKEINRCWQEPCLGHRLPLLG*RIFQGR
Trigger: CCTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAG...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCCAAACTCAGCCCCTGTaGGATTCGATGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFQTQPL*DSMKVA
Trigger: TGCCACCTTCATCGAATCCCACAGGGGCTGAGTTTG...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTCAAACTCAGCCCCTGTaGGATTCGATGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSQTQPL*DSMKVA
Trigger: TGCCACCTTCATCGAATCCCACAGGGGCTGAGTTTG...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCAACTCATACACGAGCTaGAGATGTGGCCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSNSYTS*RCGQAA
Trigger: AGCTGCTTGGCCACATCTCCAGCTCGTGTATGAGTT...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTACCTCCTTGGGGCTGTaGGTCTTGGGCCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFTSLGL*VLGQNL
Trigger: CAAGTTTTGGCCCAAGACCCACAGCCCCAAGGAGGT...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCGGAACATGGGATACTaGGGATTAAGCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCRNMGY*GLSRAS
Trigger: GCTGGCCCGGCTTAATCCCCAGTATCCCATGTTCCG...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTATGGTGTACACGTCCTaGGGCAGCTCCGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLMVYTS*GSSDFL
Trigger: GAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCAT...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGTAGCTGTGGGTGTAGGGAGCAGAGTATaGAGGGCCAGGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ERMYSCVYFSEQPQVAVGVGSRV*RARAVS
Trigger: GGACACTGCCCTGGCCCTCCATACTCTGCTCCCTAC...ACCCACAGCTACCTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCAGAGGGACCATTCTGTaGGTGTCCCTGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFRGTIL*VSLLQV
Trigger: CACTTGAAGCAGGGACACCCACAGAATGGTCCCTCT...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGAGGGACCATTCTGTaGGTGTCCCTGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSRGTIL*VSLLQV
Trigger: CACTTGAAGCAGGGACACCCACAGAATGGTCCCTCT...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCAGAGGGACCATTCTGTaGGTGTCCCTGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSRGTIL*VSLLQV
Trigger: CACTTGAAGCAGGGACACCCACAGAATGGTCCCTCT...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGGGCATGAACACCTTTTaGGGAGAAGAGGGACCATTC +
Preference number: 4 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRGMNTF*GEEGPF
Trigger: GAATGGTCCCTCTTCTCCCCAAAAGGTGTTCATGCC...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCGGCATGAACACCTTTTaGGGAGAAGAGGGACCATTC +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPGMNTF*GEEGPF
Trigger: GAATGGTCCCTCTTCTCCCCAAAAGGTGTTCATGCC...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGTAGCTGTGGGTCTCCCCGGCCCCACTTaGTCCATCTGGGCCCTATAT +
Preference number: 4 (lower is better)
Translates to: ERMYSCVYFSEQPQVAVGLPGPT*SIWALY
Trigger: ATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAG...ACCCACAGCTACCTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAAGGCAGGAGCCATGCTTaGGGCACCGCTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKEGRSHA*GTAPCF
Trigger: GAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCC...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTGCATGTATCACTCTGTaGAGAATAAAGCACCCTATG +
Preference number: 4 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLACITL*RIKHPM
Trigger: CATAGGGTGCTTTATTCTCCACAGAGTGATACATGC...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCTCAGTTCTGTACATATaGGGACATCGGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPSVLYI*GHRSKP
Trigger: GGGCTTGGACCGATGTCCCCATATGTACAGAACTGA...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTCCGGAAGAGGTTCACTaGAAACATGGTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFPEEVH*KHGDSL
Trigger: GAGGCTGTCACCATGTTTTCAGTGAACCTCTTCCGG...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTGAAGTAGGACACGGATaGGGAACATCTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSEVGHG*GTSCAL
Trigger: AAGAGCACAAGATGTTCCTCATCCGTGTCCTACTTC...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGACTCAGAAGGTTCAATaGCGTCCAGAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRTQKVQ*RPESPP
Trigger: TGGAGGAGATTCTGGACGTCATTGAACCTTCTGAGT...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTAAGCCACAGGGAGGCATaGACACCTTTTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVSHREA*TPFGEK
Trigger: CTTCTCCCCAAAAGGTGTTCATGCCTCCCTGTGGCT...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAAGCCACAGGGAGGCATaGACACCTTTTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTSHREA*TPFGEK
Trigger: CTTCTCCCCAAAAGGTGTTCATGCCTCCCTGTGGCT...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCCATCCCCAGGTTGTCTaGGCACTAAGCATCTTAGTG +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFHPQVV*ALSILV
Trigger: CACTAAGATGCTTAGTGCTCAGACAACCTGGGGATG...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCCATCCCCAGGTTGTCTaGGCACTAAGCATCTTAGTG +
Preference number: 4 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSHPQVV*ALSILV
Trigger: CACTAAGATGCTTAGTGCTCAGACAACCTGGGGATG...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCGGGACCAATGGGGCTTaGCATAACTTTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPGTNGA*HNFGEN
Trigger: ATTCTCACCAAAGTTATGTCAAGCCCCATTGGTCCC...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACACCGGCTCAGTCAGACTaGTCTCCTTCTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: LLGRRGTILWVSLLQVPTPAQSD*SPSPGI
Trigger: AATTCCTGGAGAAGGAGAGCAGTCTGACTGAGCCGG...TGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTATAGAGAGCACGCTCTaGCACCTGGAAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLIESTL*HLEMGA
Trigger: AGCCCCCATTTCCAGGTGGCAGAGCGTGCTCTCTAT...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTATAGAGAGCACGCTCTaGCACCTGGAAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCIESTL*HLEMGA
Trigger: AGCCCCCATTTCCAGGTGGCAGAGCGTGCTCTCTAT...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ACGTCCTGGGGCAGCTCCGACTTCCTCCGCAGCAGCACTTTCTCCTTCTTGATGGCCCTTCTGCTTCTCTaGCTTGTATTGTTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TSWGSSDFLRSSTFSFLMALLLL*LVLLCA
Trigger: TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGC...CATCAAGAAGGAGAAAGTGCTGCTGCGGAGGAAGTCGGAGCTGCCCCAGGACGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR GCA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTGCCCTTCTGCTTCTCTaGCTTGTATTGTTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSALLLL*LVLLCA
Trigger: TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGC...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACACGGAACCGGCCCTTCTaGTTCTCTGCCTTGTATTGT +
Preference number: 4 (lower is better)
Translates to: LLGRRGTILWVSLLQVPTRNRPF*FSALYC
Trigger: ACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCG...TGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTCGGAACCGGCCCTTCTaGTTCTCTGCCTTGTATTGT +
Preference number: 4 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFRNRPF*FSALYC
Trigger: ACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCG...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACACTTGTGCGCCTCCAGTaGCTTGATGGTGTACACGTC +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTLVRLQ*LDGVHV
Trigger: GACGTGTACACCATCAAGGCACTGGAGGCGCACAAG...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGTCTTCCGCCCGCTTGTaGGCCTCCAGTGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLSSARL*ASSALM
Trigger: CATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGA...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGATTCTGTGGGTGTCCCTaGTTCAAGTGCCCACATCCC +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRFCGCP*FKCPHP
Trigger: GGGATGTGGGCACTTGAAGCAGGGACACCCACAGAA...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGACTGCTGTTCCCTACATaGCTCTGCAGGGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRLLFPT*LCRGER
Trigger: TCTCTCTCCCCTGCAGAGGCATGTAGGGAACAGCAG...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGAAAAGCCGCACTGCCTaGGCCCCTGGAACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: GRIEERMYSCVYFSEQPQKSRTA*APGTWV
Trigger: GACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTT...CTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCCTCCCGCTCCTGGGTTaGCGAATCTTTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPLPLLG*RIFQGR
Trigger: CCTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAG...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCAGCTCCTCCCGCTCCTaGGTTGGCGAATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: STNKEINRCWQEPCLGHRSSSRS*VGESFR
Trigger: CCTGAAAGATTCGCCAACCCAGGAGCGGGAGGAGCT...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACACACTGGCGTAGCTTCTaGATAAACAGCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTHWRSF*INSSSR
Trigger: GCGGGAGGAGCTGTTTATCCAGAAGCTACGCCAGTG...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTACAACATCACGGCTATaGGTGATGTACTCCACCATC +
Preference number: 4 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSTTSRL*VMYSTI
Trigger: GATGGTGGAGTACATCACCCATAGCCGTGATGTTGT...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTCAAACTCAGCCCCTGTaGGATTCGATGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: EINRCWQEPCLGHRSLLPQTQPL*DSMKVA
Trigger: TGCCACCTTCATCGAATCCCACAGGGGCTGAGTTTG...AGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTAGGGCTCATCTTCCTCTaGGTCAAACTCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVGLIFL*VKLSPC
Trigger: ACAGGGGCTGAGTTTGACCCAGAGGAAGATGAGCCC...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAACCTCCTTGGGGCTGTaGGTCTTGGGCCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTTSLGL*VLGQNL
Trigger: CAAGTTTTGGCCCAAGACCCACAGCCCCAAGGAGGT...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAAGAACATCACCTCCTTaGGGCTGTGGGTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLRTSPP*GCGSWA
Trigger: GGCCCAAGACCCACAGCCCCAAGGAGGTGATGTTCT...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAAATGGTGTACACGTCCTaGGGCAGCTCCGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: LSTKHLSAQPVLATGRHEMVYTS*GSSDFL
Trigger: GAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCAT...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTGGTCAGAGAGCCTCCTaGCTGGCAGTTAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCGQRAS*LAVRNS
Trigger: AGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTGACC...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGGTCAGAGAGCCTCCTaGCTGGCAGTTAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTGQRAS*LAVRNS
Trigger: AGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTGACC...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCAGAGGGACCATTCTGTaGGTGTCCCTGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: TPFGEKRDHSVGVPASSARGTIL*VSLLQV
Trigger: CACTTGAAGCAGGGACACCCACAGAATGGTCCCTCT...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCAGGAGGGGAGATACCTaGCGTTCAAATGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPRRGDT*RSNEDE
Trigger: TTCATCCTCATTTGAACGCCAGGTATCTCCCCTCCT...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCCACTTGGTCCATCTaGGCCCTATATTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSPTWSI*ALYSSV
Trigger: AACTGATGAATATAGGGCCCAGATGGACCAAGTGGG...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTGAAATAAATAGGTGTTaGCAGGAGCCATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSEINRC*QEPCLG
Trigger: CCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TTCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAGCCTTCCTCAGCCCCTaGCCCCTCCAAGGTACCTAT +
Preference number: 4 (lower is better)
Translates to: FLHSEPALLLLCLVLLCAAFLSP*PLQGTY
Trigger: ATAGGTACCTTGGAGGGGCCAGGGGCTGAGGAAGGC...TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR TCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGACATCACGGCTATGGGTaGTGTACTCCACCATCTCGT +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRHHGYG*CTPPSR
Trigger: ACGAGATGGTGGAGTACATCACCCATAGCCGTGATG...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACATCACGGCTATGGGTaGTGTACTCCACCATCTCGT +
Preference number: 4 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVHHGYG*CTPPSR
Trigger: ACGAGATGGTGGAGTACATCACCCATAGCCGTGATG...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTGGTAAATGGCCTCAGTaGCAACATCACGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLGKWPQ*QHHGYG
Trigger: CCCATAGCCGTGATGTTGTCACTGAGGCCATTTACC...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAGGTAAATGGCCTCAGTaGCAACATCACGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRGKWPQ*QHHGYG
Trigger: CCCATAGCCGTGATGTTGTCACTGAGGCCATTTACC...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCTCACTGAAAACATGGTaGCAGCCTCAGGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSSLKTW*QPQGKW
Trigger: CCATTTACCCTGAGGCTGTCACCATGTTTTCAGTGA...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGATGCAAAATGGTCTTaGGGAAGTCCCGCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTDAKWS*GSPALE
Trigger: CTCGAGAGCGGGACTTCCTCAAGACCATTTTGCATC...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCACTCAGAAGGTTCAATaGCGTCCAGAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFTQKVQ*RPESPP
Trigger: TGGAGGAGATTCTGGACGTCATTGAACCTTCTGAGT...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCGGGACCAATGGGGCTTaGCATAACTTTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSGTNGA*HNFGEN
Trigger: ATTCTCACCAAAGTTATGTCAAGCCCCATTGGTCCC...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCATGAGGAACATCTTGTaGTCTTCTTTAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSMRNIL*SSLRGR
Trigger: CCTGCCCCTTAAAGAAGAGCACAAGATGTTCCTCAT...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGACCGGCTCAGTCAGACTaGTCTCCTTCTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRPAQSD*SPSPGI
Trigger: AATTCCTGGAGAAGGAGAGCAGTCTGACTGAGCCGG...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTACTTGTGCGCCTCCAGTaGCTTGATGGTGTACACGTC +
Preference number: 4 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLLVRLQ*LDGVHV
Trigger: GACGTGTACACCATCAAGGCACTGGAGGCGCACAAG...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCTGTCCCTGCTTCAAGTaGCCACATCCCCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTACPCFK*PHPPPL
Trigger: CAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACA...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GCTCTTGGAGTTCCTGTAGAGTGCAGGGAACATGATGGGGAGGACTCGGGCAGCGTGAGAATAATCTCCTaGTGTTCCCTACATGCCTCT +
Preference number: 4 (lower is better)
Translates to: ALGVPVECREHDGEDSGSVRIIS*CSLHAS
Trigger: AGAGGCATGTAGGGAACAGCAGGAGATTATTCTCAC...GCTGCCCGAGTCCTCCCCATCATGTTCCCTGCACTCTACAGGAACTCCAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTGCTGGGACGCTTGTTaGATGACGGTGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: STNKEINRCWQEPCLGHRCWDAC*MTVAET
Trigger: AGTCTCAGCCACCGTCATCCAACAAGCGTCCCAGCA...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAACACTGGCGTAGCTTCTaGATAAACAGCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSTKHLSAQPVLATGRHEHWRSF*INSSSR
Trigger: GCGGGAGGAGCTGTTTATCCAGAAGCTACGCCAGTG...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCAAGCAGCTTCCAGGGTaGGCTCATCTTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: STNKEINRCWQEPCLGHRKQLPG*AHLPLG
Trigger: ACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTT...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCTTCTTGGCTATGTTTaGCTGGAAATCAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPLLGYV*LEIRRL
Trigger: GAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAG...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTCTTCTTGGCTATGTTTaGCTGGAAATCAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSLLGYV*LEIRRL
Trigger: GAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAG...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGCTTCTTGGCTATGTTTaGCTGGAAATCAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRLLGYV*LEIRRL
Trigger: GAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAG...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGTAGCTGTGGGTAGAGAGCCTCCTGGCTaGCAGTTAGGAACTCTTCCG +
Preference number: 4 (lower is better)
Translates to: ERMYSCVYFSEQPQVAVGREPPG*QLGTLP
Trigger: CGGAAGAGTTCCTAACTGCCAGCCAGGAGGCTCTCT...ACCCACAGCTACCTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAAGAGGGACCATTCTGTaGGTGTCCCTGCTTCAAGTG +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTRGTIL*VSLLQV
Trigger: CACTTGAAGCAGGGACACCCACAGAATGGTCCCTCT...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGATCCCTTCAGCTACTCTaGGACCAATGGGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRSLQLL*DQWGLT
Trigger: TGTCAAGCCCCATTGGTCCCAGAGTAGCTGAAGGGA...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTTCCCTTCAGCTACTCTaGGACCAATGGGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCSLQLL*DQWGLT
Trigger: TGTCAAGCCCCATTGGTCCCAGAGTAGCTGAAGGGA...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTTCCCTTCAGCTACTCTaGGACCAATGGGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLSLQLL*DQWGLT
Trigger: TGTCAAGCCCCATTGGTCCCAGAGTAGCTGAAGGGA...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTCACTGCCTGCGCCCCTaGAACCTGGGTCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPHCLRP*NLGPAF
Trigger: GAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTG...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCAGTTCTGTACATATaGGGACATCGGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: EINRCWQEPCLGHRSLLPSVLYI*GHRSKP
Trigger: GGGCTTGGACCGATGTCCCCATATGTACAGAACTGA...AGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCGACTGGGCTTGGGGCTaGGGCTCCTCAGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGDWAWG*GSSVFS
Trigger: CGAGAACACTGAGGAGCCCCAGCCCCAAGCCCAGTC...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000472118.5
CDS-3UTR TCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTTGGATGACGGTGGCTaGGACTGGGCTTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSLDDGG*DWAWGW
Trigger: CCAGCCCCAAGCCCAGTCTCAGCCACCGTCATCCAA...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTCACTGAAAACATGGTaGCAGCCTCAGGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: PAPLGPSGPYIHQLLSTASLKTW*QPQGKW
Trigger: CCATTTACCCTGAGGCTGTCACCATGTTTTCAGTGA...GGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTGTAGAAGATGTGGTTaGTCTGCCTACGGATATAAG +
Preference number: 4 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPCRRCG*SAYGYK
Trigger: CTTATATCCGTAGGCAGATCAACCACATCTTCTACA...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTTCTTGGGCCAAAACTTaGGAAGTCCCACAATTACCG +
Preference number: 4 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFSWAKT*EVPQLP
Trigger: CGGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGA...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCAGCCACAGGGAGGCATaGACACCTTTTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTASHREA*TPFGEK
Trigger: CTTCTCCCCAAAAGGTGTTCATGCCTCCCTGTGGCT...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGAGCCACAGGGAGGCATaGACACCTTTTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLSHREA*TPFGEK
Trigger: CTTCTCCCCAAAAGGTGTTCATGCCTCCCTGTGGCT...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACACATCCCCAGGTTGTCTaGGCACTAAGCATCTTAGTG +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTHPQVV*ALSILV
Trigger: CACTAAGATGCTTAGTGCTCAGACAACCTGGGGATG...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACAGGGACCAATGGGGCTTaGCATAACTTTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: LLGRRGTILWVSLLQVPTGTNGA*HNFGEN
Trigger: ATTCTCACCAAAGTTATGTCAAGCCCCATTGGTCCC...TGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTATACTTTTCTCCTTTTaGCCTCCCTTGGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSILFSF*PPLVRH
Trigger: ATGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTAT...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCGGAGCCCCAAAAACTTaGCATAGATGCGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFGAPKT*HRCDAK
Trigger: TTTTGCATCGCATCTATGGCAAGTTTTTGGGGCTCC...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAACGGAACCGGCCCTTCTaGTTCTCTGCCTTGTATTGT +
Preference number: 4 (lower is better)
Translates to: LSTKHLSAQPVLATGRHERNRPF*FSALYC
Trigger: ACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCG...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCCTTGTGCGCCTCCAGTaGCTTGATGGTGTACACGTC +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTALVRLQ*LDGVHV
Trigger: GACGTGTACACCATCAAGGCACTGGAGGCGCACAAG...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCTTCTGTGGGTGTCCCTaGTTCAAGTGCCCACATCCC +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPFCGCP*FKCPHP
Trigger: GGGATGTGGGCACTTGAAGCAGGGACACCCACAGAA...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCCTCCCGCTCCTGGGTTaGCGAATCTTTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGLPLLG*RIFQGR
Trigger: CCTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAG...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAAAGCTCCTCCCGCTCCTaGGTTGGCGAATCTTTCAGG +
Preference number: 4 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKESSSRS*VGESFR
Trigger: CCTGAAAGATTCGCCAACCCAGGAGCGGGAGGAGCT...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCGGGCTCATCTTCCTCTaGGTCAAACTCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTAGLIFL*VKLSPC
Trigger: ACAGGGGCTGAGTTTGACCCAGAGGAAGATGAGCCC...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCAAGCAGCTTCCAGGGTaGGCTCATCTTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTAKQLPG*AHLPLG
Trigger: ACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTT...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTCTTCTTGGCTATGTTTaGCTGGAAATCAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSLLGYV*LEIRRL
Trigger: GAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAG...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCGGTCGATGTACTTCTTaGCTATGTTTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSGRCTS*LCLAGN
Trigger: ATTTCCAGCCAAACATAGCCAAGAAGTACATCGACC...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CCAGGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCGCAAGTACAAACTTCTaGTCGATGTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PGLLLTKDRARGRVFIHPASTNF*SMYFLA
Trigger: AGCCAAGAAGTACATCGACCAGAAGTTTGTACTTGC...GGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCGCAAGTACAAACTTCTaGTCGATGTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSASTNF*SMYFLA
Trigger: AGCCAAGAAGTACATCGACCAGAAGTTTGTACTTGC...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACCACAGGGGGCAGTGGTaGAGGGGCTCGGAACATGGG +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYHRGQW*RGSEHG
Trigger: CCCATGTTCCGAGCCCCTCCACCACTGCCCCCTGTG...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACAAGGAGGGGAGATACCTaGCGTTCAAATGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: LLGRRGTILWVSLLQVPTRRGDT*RSNEDE
Trigger: TTCATCCTCATTTGAACGCCAGGTATCTCCCCTCCT...TGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTATCCCTTCAGCTACTCTaGGACCAATGGGGCTTGACA +
Preference number: 4 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLSLQLL*DQWGLT
Trigger: TGTCAAGCCCCATTGGTCCCAGAGTAGCTGAAGGGA...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCGCACACGGCTGGGACTaGGGGGCCTATTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFAHGWD*GAYLCC
Trigger: GCAGCACAAATAGGCCCCCCAGTCCCAGCCGTGTGC...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACACCCACTTGGTCCATCTaGGCCCTATATTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: LLGRRGTILWVSLLQVPTPTWSI*ALYSSV
Trigger: AACTGATGAATATAGGGCCCAGATGGACCAAGTGGG...TGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTCCCACTTGGTCCATCTaGGCCCTATATTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: EINRCWQEPCLGHRSLLPPTWSI*ALYSSV
Trigger: AACTGATGAATATAGGGCCCAGATGGACCAAGTGGG...AGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCCTCCCCGGCCCCACTTaGTCCATCTGGGCCCTATAT +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGLPGPT*SIWALY
Trigger: ATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAG...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACGGCAGGAGCCATGCTTaGGGCACCGCTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYGRSHA*GTAPCF
Trigger: GAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCC...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCGCCTTCCTCAGCCCCTaGCCCCTCCAAGGTACCTAT +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSAFLSP*PLQGTY
Trigger: ATAGGTACCTTGGAGGGGCCAGGGGCTGAGGAAGGC...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACGGCTGGGGCTGCGGCTaGGCCTCCTCAGTGTTCTCG +
Preference number: 4 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDGWGCG*ASSVFS
Trigger: CGAGAACACTGAGGAGGCCCAGCCGCAGCCCCAGCC...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394110.7
ENST00000485511.6
CDS-3UTR TCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCACCCTGTGGGATTCGATaGAGGTGGCAGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRAPCGIR*RWQRPE
Trigger: TTCCGGACGCTGCCACCTTCATCGAATCCCACAGGG...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACATCTTGGGCCAAAACTTaGGAAGTCCCACAATTACCG +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTSWAKT*EVPQLP
Trigger: CGGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGA...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAAAGCCACAGGGAGGCATaGACACCTTTTGGGGAGAAG +
Preference number: 4 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKESHREA*TPFGEK
Trigger: CTTCTCCCCAAAAGGTGTTCATGCCTCCCTGTGGCT...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGGTCGATGTACTTCTTGGCTATGTTTGGCTGGAAATCAGGAGACTCAAGGAAAGGGGCGGCGTGCTATTaGTGGGACGCTTGTTGGATG +
Preference number: 4 (lower is better)
Translates to: WSMYFLAMFGWKSGDSRKGAACY*WDACWM
Trigger: CATCCAACAAGCGTCCCAGCAATAGCACGCCGCCCC...TTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACATCGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR GCA 90 bp GGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGAGGGCAGGAAGCTTCTaGAGCTCCCGATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GRIEERMYSCVYFSEQPQRAGSF*SSRFLL
Trigger: CAGCAAGAATCGGGAGCTGCAGAAGCTTCCTGCCCT...CTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTTGTACCACACAGTATaGCAGCTGAGGGTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: STNKEINRCWQEPCLGHRLYHTV*QLRVVD
Trigger: GTCTACCACCCTCAGCTGGCATACTGTGTGGTACAA...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGTAGCTGTGGGTTTGTACCACACAGTATaGCAGCTGAGGGTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: ERMYSCVYFSEQPQVAVGLYHTV*QLRVVD
Trigger: GTCTACCACCCTCAGCTGGCATACTGTGTGGTACAA...ACCCACAGCTACCTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTGCCCTTCTGCTTCTCTaGCTTGTATTGTTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLALLLL*LVLLCA
Trigger: TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGC...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCTCTTCCGCCCGCTTGTaGGCCTCCAGTGCCTTGATG +
Preference number: 4 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFSSARL*ASSALM
Trigger: CATCAAGGCACTGGAGGCGCACAAGCGGGCGGAAGA...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCTGTCCCTGCTTCAAGTaGCCACATCCCCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGCPCFK*PHPPPL
Trigger: CAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACA...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAATTCTGTGGGTGTCCCTaGTTCAAGTGCCCACATCCC +
Preference number: 4 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKEFCGCP*FKCPHP
Trigger: GGGATGTGGGCACTTGAAGCAGGGACACCCACAGAA...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACAGCCAAAAGCCGCACTaGCTGCGCCCCTGGAACCTG +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYSQKPH*LRPWNL
Trigger: CAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCT...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTATGCATTTGGCAACCTTaGGGGGCTCCTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLCIWQP*GAPSPF
Trigger: AAAAGGAGAAGGAGCCCCCCAAGGTTGCCAAATGCA...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCACTCCCGCTCCTGGGTTaGCGAATCTTTCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRALPLLG*RIFQGR
Trigger: CCTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAG...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCGCAAGTACAAACTTCTaGTCGATGTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFASTNF*SMYFLA
Trigger: AGCCAAGAAGTACATCGACCAGAAGTTTGTACTTGC...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTATGTTCCAGTGGCTCTTaGAGTTCCTGTAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLCSSGS*SSCRVQ
Trigger: CTGCACTCTACAGGAACTCCAAGAGCCACTGGAACA...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAATGTTCCAGTGGCTCTTaGAGTTCCTGTAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: LSTKHLSAQPVLATGRHECSSGS*SSCRVQ
Trigger: CTGCACTCTACAGGAACTCCAAGAGCCACTGGAACA...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCGGAACATGGGATACTaGGGATTAAGCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSRNMGY*GLSRAS
Trigger: GCTGGCCCGGCTTAATCCCCAGTATCCCATGTTCCG...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCCGGAACATGGGATACTaGGGATTAAGCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGRNMGY*GLSRAS
Trigger: GCTGGCCCGGCTTAATCCCCAGTATCCCATGTTCCG...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCGTACACAGGGGGCAGTaGTGGAGGGGCTCGGAACAT +
Preference number: 4 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFVHRGQ*WRGSEH
Trigger: ATGTTCCGAGCCCCTCCACCACTGCCCCCTGTGTAC...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCGTAGGGAGCAGAGTATaGAGGGCCAGGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSVGSRV*RARAVS
Trigger: GGACACTGCCCTGGCCCTCCATACTCTGCTCCCTAC...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGTAGGGAGCAGAGTATaGAGGGCCAGGGCAGTGTCC +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRAVGSRV*RARAVS
Trigger: GGACACTGCCCTGGCCCTCCATACTCTGCTCCCTAC...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTGCACACGGCTGGGACTaGGGGGCCTATTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPAHGWD*GAYLCC
Trigger: GCAGCACAAATAGGCCCCCCAGTCCCAGCCGTGTGC...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACGCACACGGCTGGGACTaGGGGGCCTATTTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYAHGWD*GAYLCC
Trigger: GCAGCACAAATAGGCCCCCCAGTCCCAGCCGTGTGC...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCACTCCCCGGCCCCACTTaGTCCATCTGGGCCCTATAT +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRALPGPT*SIWALY
Trigger: ATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAG...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCACTGGCGTAGCTTCTaGATAAACAGCTCCTTCTTG +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLHWRSF*INSSFL
Trigger: CAAGAAGGAGCTGTTTATCCAGAAGCTACGCCAGTG...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394110.7
CDS-3UTR TCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCACTGAAAACATGGTaGCAGCCTCAGGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: STNKEINRCWQEPCLGHRSLKTW*QPQGKW
Trigger: CCATTTACCCTGAGGCTGTCACCATGTTTTCAGTGA...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCCCCTGTGGGATTCGATaGAGGTGGCAGCGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTPCGIR*RWQRPE
Trigger: TTCCGGACGCTGCCACCTTCATCGAATCCCACAGGG...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGTAGCTGTGGGTGAAGTAGGACACGGATaGGGAACATCTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: ERMYSCVYFSEQPQVAVGEVGHG*GTSCAL
Trigger: AAGAGCACAAGATGTTCCTCATCCGTGTCCTACTTC...ACCCACAGCTACCTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAAACTCAGAAGGTTCAATaGCGTCCAGAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSTKHLSAQPVLATGRHETQKVQ*RPESPP
Trigger: TGGAGGAGATTCTGGACGTCATTGAACCTTCTGAGT...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCACTCAGAAGGTTCAATaGCGTCCAGAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: STNKEINRCWQEPCLGHRTQKVQ*RPESPP
Trigger: TGGAGGAGATTCTGGACGTCATTGAACCTTCTGAGT...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAATGTCTTTTAGCATCTaGACAGCCTCAGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRMSFSI*TASVST
Trigger: TGTGGAGACTGAGGCTGTTCAGATGCTAAAAGACAT...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCCACATCCCCCTCCCTTaGGTAGCTAGAGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTHIPLP*VAREAL
Trigger: CAGCGCCTCTCTAGCTACTCAAGGGAGGGGGATGTG...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCCATCCCCAGGTTGTCTaGGCACTAAGCATCTTAGTG +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPHPQVV*ALSILV
Trigger: CACTAAGATGCTTAGTGCTCAGACAACCTGGGGATG...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGCATCCCCAGGTTGTCTaGGCACTAAGCATCTTAGTG +
Preference number: 4 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLHPQVV*ALSILV
Trigger: CACTAAGATGCTTAGTGCTCAGACAACCTGGGGATG...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTATACTTTTCTCCTTTTaGCCTCCCTTGGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLILFSF*PPLVRH
Trigger: ATGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTAT...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp CTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGGAGCCCCAAAAACTTaGCATAGATGCGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: LGAPLPASFFLVLGTNSTGAPKT*HRCDAK
Trigger: TTTTGCATCGCATCTATGGCAAGTTTTTGGGGCTCC...TGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTATGAGGAACATCTTGTaGTCTTCTTTAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCMRNIL*SSLRGR
Trigger: CCTGCCCCTTAAAGAAGAGCACAAGATGTTCCTCAT...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTAATGAGGAACATCTTGTaGTCTTCTTTAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVMRNIL*SSLRGR
Trigger: CCTGCCCCTTAAAGAAGAGCACAAGATGTTCCTCAT...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGGAGTTCCTGTAGAGTaGAGGGAACATGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: GRIEERMYSCVYFSEQPQGVPVE*REHDGE
Trigger: CTCCCCATCATGTTCCCTGCACTCTACAGGAACTCC...CTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCATGTCCCTGCTTCAAGTaGCCACATCCCCCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRACPCFK*PHPPPL
Trigger: CAAGGGAGGGGGATGTGGGCACTTGAAGCAGGGACA...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAGTGAGAATAATCTCCTaGTGTTCCCTACATGCCTCT +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRVRIIS*CSLHAS
Trigger: AGAGGCATGTAGGGAACAGCAGGAGATTATTCTCAC...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTAAAAGCCGCACTGCCTaGGCCCCTGGAACCTGGGTC +
Preference number: 4 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGKSRTA*APGTWV
Trigger: GACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTT...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCTGCTGGGACGCTTGTTaGATGACGGTGGCTGAGACT +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSCWDAC*MTVAET
Trigger: AGTCTCAGCCACCGTCATCCAACAAGCGTCCCAGCA...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCGCGGCGTGCTATTGCTaGGACGCTTGTTGGATGACG +
Preference number: 4 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFAACYC*DACWMT
Trigger: CGTCATCCAACAAGCGTCCCAGCAATAGCACGCCGC...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCACAACATCACGGCTATaGGTGATGTACTCCACCATC +
Preference number: 4 (lower is better)
Translates to: STNKEINRCWQEPCLGHRTTSRL*VMYSTI
Trigger: GATGGTGGAGTACATCACCCATAGCCGTGATGTTGT...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAAACAACATCACGGCTATaGGTGATGTACTCCACCATC +
Preference number: 4 (lower is better)
Translates to: LSTKHLSAQPVLATGRHETTSRL*VMYSTI
Trigger: GATGGTGGAGTACATCACCCATAGCCGTGATGTTGT...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCGGGCTCATCTTCCTCTaGGTCAAACTCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGGLIFL*VKLSPC
Trigger: ACAGGGGCTGAGTTTGACCCAGAGGAAGATGAGCCC...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TTCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAAACTCATACACGAGCTaGAGATGTGGCCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: FLHSEPALLLLCLVLLCANSYTS*RCGQAA
Trigger: AGCTGCTTGGCCACATCTCCAGCTCGTGTATGAGTT...TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCAACTCATACACGAGCTaGAGATGTGGCCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTANSYTS*RCGQAA
Trigger: AGCTGCTTGGCCACATCTCCAGCTCGTGTATGAGTT...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGATTGGCTATGTTTGGCTaGAAATCAGGAGACTCAAGG +
Preference number: 4 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRLAMFG*KSGDSR
Trigger: CCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAA...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCTTCTTGGCTATGTTTaGCTGGAAATCAGGAGACTC +
Preference number: 4 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCLLGYV*LEIRRL
Trigger: GAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAG...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCGGTCGATGTACTTCTTaGCTATGTTTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: TPFGEKRDHSVGVPASSAGRCTS*LCLAGN
Trigger: ATTTCCAGCCAAACATAGCCAAGAAGTACATCGACC...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAAGAACATCACCTCCTTaGGGCTGTGGGTCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRARTSPP*GCGSWA
Trigger: GGCCCAAGACCCACAGCCCCAAGGAGGTGATGTTCT...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCATCACGGCTATGGGTaGTGTACTCCACCATCTCGT +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSHHGYG*CTPPSR
Trigger: ACGAGATGGTGGAGTACATCACCCATAGCCGTGATG...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCGGTAAATGGCCTCAGTaGCAACATCACGGCTATGGG +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSGKWPQ*QHHGYG
Trigger: CCCATAGCCGTGATGTTGTCACTGAGGCCATTTACC...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCTCACTGAAAACATGGTaGCAGCCTCAGGGTAAATGG +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTASLKTW*QPQGKW
Trigger: CCATTTACCCTGAGGCTGTCACCATGTTTTCAGTGA...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCCGGAAGAGGTTCACTaGAAACATGGTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSPEEVH*KHGDSL
Trigger: GAGGCTGTCACCATGTTTTCAGTGAACCTCTTCCGG...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTATGTAGAAGATGTGGTTaGTCTGCCTACGGATATAAG +
Preference number: 4 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVCRRCG*SAYGYK
Trigger: CTTATATCCGTAGGCAGATCAACCACATCTTCTACA...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TTCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAGAAGTAGGACACGGATaGGGAACATCTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: FLHSEPALLLLCLVLLCAEVGHG*GTSCAL
Trigger: AAGAGCACAAGATGTTCCTCATCCGTGTCCTACTTC...TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR TCA 90 bp TTCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAACTCAGAAGGTTCAATaGCGTCCAGAATCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLHSEPALLLLCLVLLCATQKVQ*RPESPP
Trigger: TGGAGGAGATTCTGGACGTCATTGAACCTTCTGAGT...TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR GCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACGGGGCGGCGTGCTATTaGTGGGACGCTTGTTGGATG +
Preference number: 4 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDGAACY*WDACWM
Trigger: CATCCAACAAGCGTCCCAGCAATAGCACGCCGCCCC...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAATAGAGAGCACGCTCTaGCACCTGGAAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRAIESTL*HLEMGA
Trigger: AGCCCCCATTTCCAGGTGGCAGAGCGTGCTCTCTAT...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCGGAGTTCCTGTAGAGTaGAGGGAACATGATGGGGAG +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGGVPVE*REHDGE
Trigger: CTCCCCATCATGTTCCCTGCACTCTACAGGAACTCC...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCACTTGTGCGCCTCCAGTaGCTTGATGGTGTACACGTC +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRALVRLQ*LDGVHV
Trigger: GACGTGTACACCATCAAGGCACTGGAGGCGCACAAG...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCGGGCTCATCTTCCTCTaGGTCAAACTCAGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSGLIFL*VKLSPC
Trigger: ACAGGGGCTGAGTTTGACCCAGAGGAAGATGAGCCC...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAAAGCAGCTTCCAGGGTaGGCTCATCTTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRAKQLPG*AHLPLG
Trigger: ACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTT...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTGGTCGATGTACTTCTTaGCTATGTTTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCGRCTS*LCLAGN
Trigger: ATTTCCAGCCAAACATAGCCAAGAAGTACATCGACC...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGACAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTAGCAAGTACAAACTTCTaGTCGATGTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GQASPGCLSTKHLSAQPVASTNF*SMYFLA
Trigger: AGCCAAGAAGTACATCGACCAGAAGTTTGTACTTGC...TACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCACCTCCTTGGGGCTGTaGGTCTTGGGCCAAAACTTG +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSTSLGL*VLGQNL
Trigger: CAAGTTTTGGCCCAAGACCCACAGCCCCAAGGAGGT...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCCGGAACATGGGATACTaGGGATTAAGCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTRNMGY*GLSRAS
Trigger: GCTGGCCCGGCTTAATCCCCAGTATCCCATGTTCCG...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACCGGAACATGGGATACTaGGGATTAAGCCGGGCCAGC +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYRNMGY*GLSRAS
Trigger: GCTGGCCCGGCTTAATCCCCAGTATCCCATGTTCCG...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACATGGTGTACACGTCCTaGGGCAGCTCCGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYMVYTS*GSSDFL
Trigger: GAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCAT...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGGTCAGAGAGCCTCCTaGCTGGCAGTTAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRAGQRAS*LAVRNS
Trigger: AGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTGACC...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGCAGGAGCCATGCTTaGGGCACCGCTCCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLGRSHA*GTAPCF
Trigger: GAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCC...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCGAAATAAATAGGTGTTaGCAGGAGCCATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPEINRC*QEPCLG
Trigger: CCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTGCATGTATCACTCTGTaGAGAATAAAGCACCCTATG +
Preference number: 4 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCACITL*RIKHPM
Trigger: CATAGGGTGCTTTATTCTCCACAGAGTGATACATGC...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR CAA 72 bp TCAGCTACTCTGGGACCAATGGGGCTTGACATAACTTaGGTGAGAATAATCTCCTGCTGTTCCCTACATGCC +
Preference number: 4 (lower is better)
Translates to: SATLGPMGLDIT*VRIISCCSLHA
Trigger: GGCATGTAGGGAACAGCAGGAGATTATTCTCACCAAAGTTATGTCAAGCCCCATTGGTCCCAGAGTAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCACCGGAAGAGGTTCACTaGAAACATGGTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRAPEEVH*KHGDSL
Trigger: GAGGCTGTCACCATGTTTTCAGTGAACCTCTTCCGG...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCGATGCAAAATGGTCTTaGGGAAGTCCCGCTCTCGAG +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSDAKWS*GSPALE
Trigger: CTCGAGAGCGGGACTTCCTCAAGACCATTTTGCATC...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTATGTAGAAGATGTGGTTaGTCTGCCTACGGATATAAG +
Preference number: 4 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLCRRCG*SAYGYK
Trigger: CTTATATCCGTAGGCAGATCAACCACATCTTCTACA...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp GGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGTCTTGGGCCAAAACTTaGGAAGTCCCACAATTACCG +
Preference number: 4 (lower is better)
Translates to: GRIEERMYSCVYFSEQPQSWAKT*EVPQLP
Trigger: CGGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGA...CTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCATGTCTTTTAGCATCTaGACAGCCTCAGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPMSFSI*TASVST
Trigger: TGTGGAGACTGAGGCTGTTCAGATGCTAAAAGACAT...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCCAAAAGCCGCACTGCCATACTTTTCTCCTTTTaGCCTCCCTTGGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: ITLWRIKHPMYTAKSRTAILFSF*PPLVRH
Trigger: ATGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTAT...GGCAGTGCGGCTTTTGGCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTAGGGCAGGAAGCTTCTaGAGCTCCCGATTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPRAGSF*SSRFLL
Trigger: CAGCAAGAATCGGGAGCTGCAGAAGCTTCCTGCCCT...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCATAGAGAGCACGCTCTaGCACCTGGAAATGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTIESTL*HLEMGA
Trigger: AGCCCCCATTTCCAGGTGGCAGAGCGTGCTCTCTAT...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAAGCCCTTCTGCTTCTCTaGCTTGTATTGTTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKEALLLL*LVLLCA
Trigger: TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGC...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCCGGAACCGGCCCTTCTaGTTCTCTGCCTTGTATTGT +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSRNRPF*FSALYC
Trigger: ACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCG...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTCTGTGGGTGTCCCTaGTTCAAGTGCCCACATCCC +
Preference number: 4 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPFCGCP*FKCPHP
Trigger: GGGATGTGGGCACTTGAAGCAGGGACACCCACAGAA...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCTGCATTTGGCAACCTTaGGGGGCTCCTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSCIWQP*GAPSPF
Trigger: AAAAGGAGAAGGAGCCCCCCAAGGTTGCCAAATGCA...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCCACTGGCGTAGCTTCTaGATAAACAGCTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTHWRSF*INSSSR
Trigger: GCGGGAGGAGCTGTTTATCCAGAAGCTACGCCAGTG...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCACAAACTCAGCCCCTGTaGGATTCGATGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRAQTQPL*DSMKVA
Trigger: TGCCACCTTCATCGAATCCCACAGGGGCTGAGTTTG...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACAAGCAGCTTCCAGGGTaGGCTCATCTTCCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYKQLPG*AHLPLG
Trigger: ACCCAGAGGAAGATGAGCCCACCCTGGAAGCTGCTT...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCAACTCATACACGAGCTaGAGATGTGGCCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSNSYTS*RCGQAA
Trigger: AGCTGCTTGGCCACATCTCCAGCTCGTGTATGAGTT...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAAGGTCGATGTACTTCTTaGCTATGTTTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: LSTKHLSAQPVLATGRHEGRCTS*LCLAGN
Trigger: ATTTCCAGCCAAACATAGCCAAGAAGTACATCGACC...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGTACTTCTTGGCTATGTTTGGCTGGAAATCAGGAGACTCAAGGAAACGTAAGAAGAGAGCCTCCTGGCTaGCAGTTAGGAACTCTTCCG +
Preference number: 4 (lower is better)
Translates to: CTSWLCLAGNQETQGNVRREPPG*QLGTLP
Trigger: CGGAAGAGTTCCTAACTGCCAGCCAGGAGGCTCTCT...TCTTACGTTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACAGAGAGCCTCCTGGCTaGCAGTTAGGAACTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYREPPG*QLGTLP
Trigger: CGGAAGAGTTCCTAACTGCCAGCCAGGAGGCTCTCT...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACGGTCAGAGAGCCTCCTaGCTGGCAGTTAGGAACTCT +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYGQRAS*LAVRNS
Trigger: AGAGTTCCTAACTGCCAGCCAGGAGGCTCTCTGACC...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCGGCATGAACACCTTTTaGGGAGAAGAGGGACCATTC +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGGMNTF*GEEGPF
Trigger: GAATGGTCCCTCTTCTCCCCAAAAGGTGTTCATGCC...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAGGCATGTATCACTCTGTaGAGAATAAAGCACCCTATG +
Preference number: 4 (lower is better)
Translates to: SFIRNRPFCFSALYCCVQACITL*RIKHPM
Trigger: CATAGGGTGCTTTATTCTCCACAGAGTGATACATGC...CTGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR TCA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCTGTAGAAGATGTGGTTaGTCTGCCTACGGATATAAG +
Preference number: 4 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPCRRCG*SAYGYK
Trigger: CTTATATCCGTAGGCAGATCAACCACATCTTCTACA...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCTCTTGGGCCAAAACTTaGGAAGTCCCACAATTACCG +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSSWAKT*EVPQLP
Trigger: CGGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGA...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTCACATCCCCCTCCCTTaGGTAGCTAGAGAGGCGCTG +
Preference number: 4 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLHIPLP*VAREAL
Trigger: CAGCGCCTCTCTAGCTACTCAAGGGAGGGGGATGTG...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCGGGACCAATGGGGCTTaGCATAACTTTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGGTNGA*HNFGEN
Trigger: ATTCTCACCAAAGTTATGTCAAGCCCCATTGGTCCC...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCTTGTACCACACAGTATaGCAGCTGAGGGTGGTAGAC +
Preference number: 4 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFLYHTV*QLRVVD
Trigger: GTCTACCACCCTCAGCTGGCATACTGTGTGGTACAA...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TGTACTTCTTGGCTATGTTTGGCTGGAAATCAGGAGACTCAAGGAAACGTAAGACCGGCTCAGTCAGACTaGTCTCCTTCTCCAGGAATT +
Preference number: 4 (lower is better)
Translates to: CTSWLCLAGNQETQGNVRPAQSD*SPSPGI
Trigger: AATTCCTGGAGAAGGAGAGCAGTCTGACTGAGCCGG...TCTTACGTTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR GCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACCGGAACCGGCCCTTCTaGTTCTCTGCCTTGTATTGT +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYRNRPF*FSALYC
Trigger: ACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCG...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCTGCTGTTCCCTACATaGCTCTGCAGGGGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGLLFPT*LCRGER
Trigger: TCTCTCTCCCCTGCAGAGGCATGTAGGGAACAGCAG...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGCATTTGGCAACCTTaGGGGGCTCCTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSCIWQP*GAPSPF
Trigger: AAAAGGAGAAGGAGCCCCCCAAGGTTGCCAAATGCA...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAATTGGCTATGTTTGGCTaGAAATCAGGAGACTCAAGG +
Preference number: 4 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKELAMFG*KSGDSR
Trigger: CCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAA...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGGCAAGTACAAACTTCTaGTCGATGTACTTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLASTNF*SMYFLA
Trigger: AGCCAAGAAGTACATCGACCAGAAGTTTGTACTTGC...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTTCCAGTGGCTCTTaGAGTTCCTGTAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSCSSGS*SSCRVQ
Trigger: CTGCACTCTACAGGAACTCCAAGAGCCACTGGAACA...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGTACACAGGGGGCAGTaGTGGAGGGGCTCGGAACAT +
Preference number: 4 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLVHRGQ*WRGSEH
Trigger: ATGTTCCGAGCCCCTCCACCACTGCCCCCTGTGTAC...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACAGAGAGCCTCCTGGCTaGCAGTTAGGAACTCTTCCG +
Preference number: 4 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDREPPG*QLGTLP
Trigger: CGGAAGAGTTCCTAACTGCCAGCCAGGAGGCTCTCT...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCGAAATAAATAGGTGTTaGCAGGAGCCATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSEINRC*QEPCLG
Trigger: CCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGCCTTCCTCAGCCCCTaGCCCCTCCAAGGTACCTAT +
Preference number: 4 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLAFLSP*PLQGTY
Trigger: ATAGGTACCTTGGAGGGGCCAGGGGCTGAGGAAGGC...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCATCAGTTCTGTACATATaGGGACATCGGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: DEGKNRGAYVFLCVLLRASVLYI*GHRSKP
Trigger: GGGCTTGGACCGATGTCCCCATATGTACAGAACTGA...TGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCATGTCTTTTAGCATCTaGACAGCCTCAGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSMSFSI*TASVST
Trigger: TGTGGAGACTGAGGCTGTTCAGATGCTAAAAGACAT...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCTCTTGGGCCAAAACTTaGGAAGTCCCACAATTACCT +
Preference number: 4 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGSWAKT*EVPQLP
Trigger: AGGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGA...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000470467.5
CDS-3UTR GCA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCGGAGCCCCAAAAACTTaGCATAGATGCGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: THLSMYHSVENKAPYVHSGAPKT*HRCDAK
Trigger: TTTTGCATCGCATCTATGGCAAGTTTTTGGGGCTCC...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTGCATTTGGCAACCTTaGGGGGCTCCTTCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYCIWQP*GAPSPF
Trigger: AAAAGGAGAAGGAGCCCCCCAAGGTTGCCAAATGCA...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCACAACATCACGGCTATaGGTGATGTACTCCACCATC +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSTTSRL*VMYSTI
Trigger: GATGGTGGAGTACATCACCCATAGCCGTGATGTTGT...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTGTTCCAGTGGCTCTTaGAGTTCCTGTAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYCSSGS*SSCRVQ
Trigger: CTGCACTCTACAGGAACTCCAAGAGCCACTGGAACA...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCGGCATGAACACCTTTTaGGGAGAAGAGGGACCATTC +
Preference number: 4 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTGMNTF*GEEGPF
Trigger: GAATGGTCCCTCTTCTCCCCAAAAGGTGTTCATGCC...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCAGGAGGGGAGATACCTaGCGTTCAAATGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFRRGDT*RSNEDE
Trigger: TTCATCCTCATTTGAACGCCAGGTATCTCCCCTCCT...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
3UTR CAA 72 bp CCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATaGTCCACAGCCTATACTTTTCTCCTTTTGACCTCC +
Preference number: 4 (lower is better)
Translates to: PLGPSGPYIHQL*STAYTFLLLTS
Trigger: GGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCGGAGCCCCAAAAACTTaGCATAGATGCGATGCAAAA +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSGAPKT*HRCDAK
Trigger: TTTTGCATCGCATCTATGGCAAGTTTTTGGGGCTCC...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCATGAGGAACATCTTGTaGTCTTCTTTAAGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSMRNIL*SSLRGR
Trigger: CCTGCCCCTTAAAGAAGAGCACAAGATGTTCCTCAT...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTGCCCTTCTGCTTCTCTaGCTTGTATTGTTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPALLLL*LVLLCA
Trigger: TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGC...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTAACTCATACACGAGCTaGAGATGTGGCCAAGCAGCT +
Preference number: 4 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGNSYTS*RCGQAA
Trigger: AGCTGCTTGGCCACATCTCCAGCTCGTGTATGAGTT...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTTGGCTATGTTTGGCTaGAAATCAGGAGACTCAAGG +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSLAMFG*KSGDSR
Trigger: CCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAA...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACTGTTCCAGTGGCTCTTaGAGTTCCTGTAGAGTGCAG +
Preference number: 4 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDCSSGS*SSCRVQ
Trigger: CTGCACTCTACAGGAACTCCAAGAGCCACTGGAACA...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTCCCACTTGGTCCATCTaGGCCCTATATTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPPTWSI*ALYSSV
Trigger: AACTGATGAATATAGGGCCCAGATGGACCAAGTGGG...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTCCGGAAGAGGTTCACTaGAAACATGGTGACAGCCTC +
Preference number: 4 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLPEEVH*KHGDSL
Trigger: GAGGCTGTCACCATGTTTTCAGTGAACCTCTTCCGG...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACGAAGTAGGACACGGATaGGGAACATCTTGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDEVGHG*GTSCAL
Trigger: AAGAGCACAAGATGTTCCTCATCCGTGTCCTACTTC...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTGGGACCAATGGGGCTTaGCATAACTTTGGTGAGAAT +
Preference number: 4 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGGTNGA*HNFGEN
Trigger: ATTCTCACCAAAGTTATGTCAAGCCCCATTGGTCCC...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTGTGAGAATAATCTCCTaGTGTTCCCTACATGCCTCT +
Preference number: 4 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPVRIIS*CSLHAS
Trigger: AGAGGCATGTAGGGAACAGCAGGAGATTATTCTCAC...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACGTGAGAATAATCTCCTaGTGTTCCCTACATGCCTCT +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYVRIIS*CSLHAS
Trigger: AGAGGCATGTAGGGAACAGCAGGAGATTATTCTCAC...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTGGCTATGTTTGGCTaGAAATCAGGAGACTCAAGG +
Preference number: 4 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYLAMFG*KSGDSR
Trigger: CCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAA...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TGGTCGATGTACTTCTTGGCTATGTTTGGCTGGAAATCAGGAGACTCAAGGAAAGGTCGATGTACTTCTTaGCTATGTTTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: WSMYFLAMFGWKSGDSRKGRCTS*LCLAGN
Trigger: ATTTCCAGCCAAACATAGCCAAGAAGTACATCGACC...TTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACATCGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACGAAATAAATAGGTGTTaGCAGGAGCCATGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDEINRC*QEPCLG
Trigger: CCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCGCATGTATCACTCTGTaGAGAATAAAGCACCCTATG +
Preference number: 4 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSACITL*RIKHPM
Trigger: CATAGGGTGCTTTATTCTCCACAGAGTGATACATGC...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TGTACTTCTTGGCTATGTTTGGCTGGAAATCAGGAGACTCAAGGAAACGTAAGATGTAGAAGATGTGGTTaGTCTGCCTACGGATATAAG +
Preference number: 4 (lower is better)
Translates to: CTSWLCLAGNQETQGNVRCRRCG*SAYGYK
Trigger: CTTATATCCGTAGGCAGATCAACCACATCTTCTACA...TCTTACGTTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR TCA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACATGTCTTTTAGCATCTaGACAGCCTCAGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDMSFSI*TASVST
Trigger: TGTGGAGACTGAGGCTGTTCAGATGCTAAAAGACAT...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR GCA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTGTGAGAATAATCTCCTaGTGTTCCCTACATGCCTCT +
Preference number: 4 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGVRIIS*CSLHAS
Trigger: AGAGGCATGTAGGGAACAGCAGGAGATTATTCTCAC...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTTTGGCTATGTTTGGCTaGAAATCAGGAGACTCAAGG +
Preference number: 4 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGLAMFG*KSGDSR
Trigger: CCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAA...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTGCATGTATCACTCTGTaGAGAATAAAGCACCCTATG +
Preference number: 4 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPACITL*RIKHPM
Trigger: CATAGGGTGCTTTATTCTCCACAGAGTGATACATGC...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTTCAGTTCTGTACATATaGGGACATCGGTCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLSVLYI*GHRSKP
Trigger: GGGCTTGGACCGATGTCCCCATATGTACAGAACTGA...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTAGGAGGGGAGATACCTaGCGTTCAAATGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLRRGDT*RSNEDE
Trigger: TTCATCCTCATTTGAACGCCAGGTATCTCCCCTCCT...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR TCA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTATACTTTTCTCCTTTTaGCCTCCCTTGGTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLILFSF*PPLVRH
Trigger: ATGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTAT...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS GCA 90 bp TCCGGACCCGGCCCGTCTCCTGCGGCCCCGCTCCGGCTCCGGCTTTaGTCGGCCGCACTCGGCCCGCTCGGCGTCTCTTCGCCACCGCCT +
Preference number: 5 (lower is better)
Translates to: SGPGPSPAAPLRLRL*SAALGPLGVSSPPP
Trigger: AGGCGGTGGCGAAGAGACGCCGAGCGGGCCGAGTGCGGCCGAGCAAAGCCGGAGCCGGAGCGGGGCCGCAGGAGACGGGCCGGGTCCGGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS GCA 90 bp TCAGTTTATAGGGCATCTCGGCCCGTCCGGACCCGGCCCGTCTCCTaGGGCCCCGCTCCGGCTCCGGCTTTGCTCGGCCGCACTCGGCCC +
Preference number: 5 (lower is better)
Translates to: SVYRASRPVRTRPVS*GPAPAPALLGRTRP
Trigger: GGGCCGAGTGCGGCCGAGCAAAGCCGGAGCCGGAGCGGGGCCGCAGGAGACGGGCCGGGTCCGGACGGGCCGAGATGCCCTATAAACTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCGCTCCGGCTCCGGCTTaGCTCGGCCGCACTCGGCCC +
Preference number: 5 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSAPAPA*LGRTRP
Trigger: GGGCCGAGTGCGGCCGAGCAAAGCCGGAGCCGGAGC...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCGGGGGCGGCGTGCTATaGCTGGGACGCTTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLGGGVL*LGRLLD
Trigger: ATCCAACAAGCGTCCCAGCAATAGCACGCCGCCCCC...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCGCTCCGGCTCCGGCTTaGCTCGGCCGCACTCGGCCC +
Preference number: 5 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSAPAPA*LGRTRP
Trigger: GGGCCGAGTGCGGCCGAGCAAAGCCGGAGCCGGAGC...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTTGGCAGGAGCCATGCTaGGGGCACCGCTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLWQEPC*GHRSLL
Trigger: AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCA...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCTGCAGCTCCCGATTCTaGCTGAGGTTGAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLCSSRF*LRLKRE
Trigger: CTCCCGCTTCAACCTCAGCAAGAATCGGGAGCTGCA...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTGAAGCGGGAGGAGCTTaGCCGTCGCTCCTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLEAGGA*PSLLLD
Trigger: GTCAAGAAGGAGCGACGGCAAAGCTCCTCCCGCTTC...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000230402.10
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCTCCGGCTCCGGCTTaGCTCGGCCGCACTCGGCCC +
Preference number: 5 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLAPAPA*LGRTRP
Trigger: GGGCCGAGTGCGGCCGAGCAAAGCCGGAGCCGGAGC...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCAGGACTCGGGCAGCATaGTCACTTATCAGGCTCATG +
Preference number: 5 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLRTRAA*SLIRLM
Trigger: CATGAGCCTGATAAGTGACAATGCTGCCCGAGTCCT...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCTCCCCGGCCCCACTaGGTCCATCTGGGCCCTATA +
Preference number: 5 (lower is better)
Translates to: GLLLTKDRARGRVFIHPSPPRPH*VHLGPI
Trigger: TATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGG...GGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCTGGCAGGAGCCATGCTaGGGGCACCGCTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSWQEPC*GHRSLL
Trigger: AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCA...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGGCTCCGGCTCCGGCTTaGCTCGGCCGCACTCGGCCC +
Preference number: 5 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLAPAPA*LGRTRP
Trigger: GGGCCGAGTGCGGCCGAGCAAAGCCGGAGCCGGAGC...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCTCGCCTCCACCATCCTaGCCCGAGCTGCTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPSPPPS*PELLGL
Trigger: CAAGCCTAGCAGCTCGGGCAAGGATGGTGGAGGCGA...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTCGCCTCCACCATCCTaGCCCGAGCTGCTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSSPPPS*PELLGL
Trigger: CAAGCCTAGCAGCTCGGGCAAGGATGGTGGAGGCGA...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGCGCCTCCAGTGCCTTGATGGTGTACACGTCCTGGGGCAGCTCCGACTTCCTCGGCAGGGCAAAGCCATaGATGATGCTGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: CASSALMVYTSWGSSDFLGRAKP*MMLPRI
Trigger: GATCCTGGGCAGCATCATCAATGGCTTTGCCCTGCC...GAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCCGGATGAGGAACATCTaGTGCTCTTCTTTAAGGGGC +
Preference number: 5 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLRMRNI*CSSLRG
Trigger: GCCCCTTAAAGAAGAGCACAAGATGTTCCTCATCCG...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTCCTCAGTCCATGGATTGTCTaGTTCCAGTGGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: HSQKPHCLRPWNLGPAFLSPWIV*FQWLLE
Trigger: CTCCAAGAGCCACTGGAACAAGACAATCCATGGACT...GAGGAAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTAACTCTTCCGCCCGCTaGTGCGCCTCCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSNSSAR*CASSAL
Trigger: CAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTT...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCGGGCTAGAGACACACTaGGCCAGCTGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSGLETH*ASWRKR
Trigger: CCTCTTCCGCCAGCTGGCCAAGTGTGTCTCTAGCCC...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCTGCGCCTCCAGTGCCTaGATGGTGTACACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPCASSA*MVYTSW
Trigger: CCAGGACGTGTACACCATCAAGGCACTGGAGGCGCA...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCAACTCTTCCGCCCGCTaGTGCGCCTCCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSNSSAR*CASSAL
Trigger: CAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTT...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCTGGCAGGAGCCATGCTaGGGGCACCGCTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: TPFGEKRDHSVGVPASSAWQEPC*GHRSLL
Trigger: AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCA...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCCTCCCGCTCCTGGGTaGGCGAATCTTTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: TPFGEKRDHSVGVPASSAPPAPG*ANLSGQ
Trigger: CTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAGG...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTCCCCGGCCCCACTaGGTCCATCTGGGCCCTATA +
Preference number: 5 (lower is better)
Translates to: KEINRCWQEPCLGHRSLLPPRPH*VHLGPI
Trigger: TATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGG...AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTTGGCAGGAGCCATGCTaGGGGCACCGCTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCWQEPC*GHRSLL
Trigger: AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCA...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS CCA 90 bp GTAGGTACAGACTGGCAAGTGATGCTGACAGTAAGAGGTGGGCCTTaGGGCCCGGAAGGGGAATTACCGGCTCAGTCAGACTGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: VGTDWQVMLTVRGGP*GPEGELPAQSDCSP
Trigger: AGGAGAGCAGTCTGACTGAGCCGGTAATTCCCCTTCCGGGCCCCAAGGCCCACCTCTTACTGTCAGCATCACTTGCCAGTCTGTACCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS-3UTR CAA 90 bp CCCCTGTGGGATTCGATGAAGGTGGCAGCGTCCGGAAGAGGTTCACTGAAAACAGAAGCGGGAGGAGCTTaGCCGTCGCTCCTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: PLWDSMKVAASGRGSLKTEAGGA*PSLLLD
Trigger: GTCAAGAAGGAGCGACGGCAAAGCTCCTCCCGCTTC...TGTTTTCAGTGAACCTCTTCCGGACGCTGCCACCTTCATCGAATCCCACAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTAGGGGTTCCATCACTTaGCTGAACTCAGAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLRGSIT*LNSEGS
Trigger: TGAACCTTCTGAGTTCAGCAAAGTGATGGAACCCCT...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAGGGCTAGAGACACACTaGGCCAGCTGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRGLETH*ASWRKR
Trigger: CCTCTTCCGCCAGCTGGCCAAGTGTGTCTCTAGCCC...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTGCGCCTCCAGTGCCTaGATGGTGTACACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: PAPLGPSGPYIHQLLSTACASSA*MVYTSW
Trigger: CCAGGACGTGTACACCATCAAGGCACTGGAGGCGCA...GGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAGCCTCCCCGGCCCCACTaGGTCCATCTGGGCCCTATA +
Preference number: 5 (lower is better)
Translates to: SFIRNRPFCFSALYCCVQPPRPH*VHLGPI
Trigger: TATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGG...CTGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS TCA 90 bp CCCTTCAGAGAGGAAACCATGTTACCGGTCAGGTCACAGCCCTCCTaGGTTCCCCCTTATGGCACCCCCAGTAGGTACAGACTGGCAAGT +
Preference number: 5 (lower is better)
Translates to: PFREETMLPVRSQPS*VPPYGTPSRYRLAS
Trigger: ACTTGCCAGTCTGTACCTACTGGGGGTGCCATAAGGGGGAACTCAGGAGGGCTGTGACCTGACCGGTAACATGGTTTCCTCTCTGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS-3UTR CAA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCGGGGGCGGCGTGCTATaGCTGGGACGCTTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: STNKEINRCWQEPCLGHRGGGVL*LGRLLD
Trigger: ATCCAACAAGCGTCCCAGCAATAGCACGCCGCCCCC...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCCGATTCTTGCTGAGGTaGAAGCGGGAGGAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFRFLLR*KREELC
Trigger: GCAAAGCTCCTCCCGCTTCAACCTCAGCAAGAATCG...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCTGCAGCTCCCGATTCTaGCTGAGGTTGAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: TPFGEKRDHSVGVPASSACSSRF*LRLKRE
Trigger: CTCCCGCTTCAACCTCAGCAAGAATCGGGAGCTGCA...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTGCAGCTCCCGATTCTaGCTGAGGTTGAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: PAPLGPSGPYIHQLLSTACSSRF*LRLKRE
Trigger: CTCCCGCTTCAACCTCAGCAAGAATCGGGAGCTGCA...GGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAACCTCCCGCTCCTGGGTaGGCGAATCTTTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: LSTKHLSAQPVLATGRHEPPAPG*ANLSGQ
Trigger: CTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAGG...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGTACACAGCCAAAAGCCGCACTGCCTGCGCCCCTGGAACCTGGGTCCGGCCTTACTTCTTGGCTATGTTaGGCTGGAAATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: CTQPKAALPAPLEPGSGLTSWLC*AGNQET
Trigger: AGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGT...AAGGCCGGACCCAGGTTCCAGGGGCGCAGGCAGTGCGGCTTTTGGCTGTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGCGATGCAAAATGGTCTaGAGGAAGTCCCGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRRCKMV*RKSRSR
Trigger: TCGAGAGCGGGACTTCCTCAAGACCATTTTGCATCG...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTCGATGCAAAATGGTCTaGAGGAAGTCCCGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: GVGRSHAWGTAPCFLLSSRCKMV*RKSRSR
Trigger: TCGAGAGCGGGACTTCCTCAAGACCATTTTGCATCG...ACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCCGATGCAAAATGGTCTaGAGGAAGTCCCGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSRCKMV*RKSRSR
Trigger: TCGAGAGCGGGACTTCCTCAAGACCATTTTGCATCG...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTGGCAGGGCAAAGCCATaGATGATGCTGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: EINRCWQEPCLGHRSLLPGRAKP*MMLPRI
Trigger: GATCCTGGGCAGCATCATCAATGGCTTTGCCCTGCC...AGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGCGCCTCCAGTGCCTTGATGGTGTACACGTCCTGGGGCAGCTCCGACTTCCTCAGGGGTTCCATCACTTaGCTGAACTCAGAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: CASSALMVYTSWGSSDFLRGSIT*LNSEGS
Trigger: TGAACCTTCTGAGTTCAGCAAAGTGATGGAACCCCT...GAGGAAGTCGGAGCTGCCCCAGGACGTGTACACCATCAAGGCACTGGAGGCGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCAACTCTTCCGCCCGCTaGTGCGCCTCCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: STNKEINRCWQEPCLGHRNSSAR*CASSAL
Trigger: CAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTT...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCCCTCCCCGGCCCCACTaGGTCCATCTGGGCCCTATA +
Preference number: 5 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPPPRPH*VHLGPI
Trigger: TATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGG...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TTCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCATCGCCTCCACCATCCTaGCCCGAGCTGCTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: FLHSEPALLLLCLVLLCASPPPS*PELLGL
Trigger: CAAGCCTAGCAGCTCGGGCAAGGATGGTGGAGGCGA...TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp GGGTGTTTATTCATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCCGATGCAAAATGGTCTaGAGGAAGTCCCGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: GCLFIPPRPHLVHLGPIFRCKMV*RKSRSR
Trigger: TCGAGAGCGGGACTTCCTCAAGACCATTTTGCATCG...GAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGATGAATAAACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGAGGCAGGGCAAAGCCATaGATGATGCTGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRGRAKP*MMLPRI
Trigger: GATCCTGGGCAGCATCATCAATGGCTTTGCCCTGCC...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ACGTCCTGGGGCAGCTCCGACTTCCTCCGCAGCAGCACTTTCTCCTTCTTGATGCGGATGAGGAACATCTaGTGCTCTTCTTTAAGGGGC +
Preference number: 5 (lower is better)
Translates to: TSWGSSDFLRSSTFSFLMRMRNI*CSSLRG
Trigger: GCCCCTTAAAGAAGAGCACAAGATGTTCCTCATCCG...CATCAAGAAGGAGAAAGTGCTGCTGCGGAGGAAGTCGGAGCTGCCCCAGGACGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp TTCCTTCATTCGGAACCGGCCCTTCTGCTTCTCTGCCTTGTATTGTTGTGTGCAGGGCTAGAGACACACTaGGCCAGCTGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: FLHSEPALLLLCLVLLCAGLETH*ASWRKR
Trigger: CCTCTTCCGCCAGCTGGCCAAGTGTGTCTCTAGCCC...TGCACACAACAATACAAGGCAGAGAAGCAGAAGGGCCGGTTCCGAATGAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCAGGACTCGGGCAGCATaGTCACTTATCAGGCTCATG +
Preference number: 5 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSRTRAA*SLIRLM
Trigger: CATGAGCCTGATAAGTGACAATGCTGCCCGAGTCCT...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAAGGGGGCGGCGTGCTATaGCTGGGACGCTTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKEGGGVL*LGRLLD
Trigger: ATCCAACAAGCGTCCCAGCAATAGCACGCCGCCCCC...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGACGATTCTTGCTGAGGTaGAAGCGGGAGGAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRRFLLR*KREELC
Trigger: GCAAAGCTCCTCCCGCTTCAACCTCAGCAAGAATCG...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAACCTCCCGCTCCTGGGTaGGCGAATCTTTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKEPPAPG*ANLSGQ
Trigger: CTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAGG...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGCTGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCGTCTTGGGCCAAAACTaGAGAAGTCCCACAATTACC +
Preference number: 5 (lower is better)
Translates to: GCCSPKTGHGVGCLFIPPVLGQN*RSPTIT
Trigger: GGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGAC...GGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTAGGACTCGGGCAGCATaGTCACTTATCAGGCTCATG +
Preference number: 5 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFRTRAA*SLIRLM
Trigger: CATGAGCCTGATAAGTGACAATGCTGCCCGAGTCCT...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTCCATGGATTGTCTaGTTCCAGTGGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: IGVGRSHAWGTAPCFLLSSPWIV*FQWLLE
Trigger: CTCCAAGAGCCACTGGAACAAGACAATCCATGGACT...AGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAACACCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACATCCCCCTCCAGATCAGTCCATGGATaGTCTTGTTCCAGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: RRGTILWVSLLQVPTSPSRSVHG*SCSSGS
Trigger: AGAGCCACTGGAACAAGACAATCCATGGACTGATCT...GGAGGGGGATGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS TCA 90 bp TATCCCAGCTGGAACACTTTCCTGCCGGCTCTTTTCTCTGCTGCCTaGGTTGGACATTATAAGGAGGAAGGCAGCTCACCTGAGGGTGGT +
Preference number: 5 (lower is better)
Translates to: YPSWNTFLPALFSAA*VGHYKEEGSSPEGG
Trigger: ACCACCCTCAGGTGAGCTGCCTTCCTCCTTATAATGTCCAACTCAGGCAGCAGAGAAAAGAGCCGGCAGGAAAGTGTTCCAGCTGGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS-3UTR CAA 90 bp GTACACGTCCTGGGGCAGCTCCGACTTCCTCCGCAGCAGCACTTTCTCCTTCTTACTTCTTGGCTATGTTaGGCTGGAAATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: VHVLGQLRLPPQQHFLLLTSWLC*AGNQET
Trigger: AGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGT...AAGAAGGAGAAAGTGCTGCTGCGGAGGAAGTCGGAGCTGCCCCAGGACGTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCGATGCAAAATGGTCTaGAGGAAGTCCCGCTCTCGA +
Preference number: 5 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCRCKMV*RKSRSR
Trigger: TCGAGAGCGGGACTTCCTCAAGACCATTTTGCATCG...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCCGGATGAGGAACATCTaGTGCTCTTCTTTAAGGGGC +
Preference number: 5 (lower is better)
Translates to: PAPLGPSGPYIHQLLSTARMRNI*CSSLRG
Trigger: GCCCCTTAAAGAAGAGCACAAGATGTTCCTCATCCG...GGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCAGGGGTTCCATCACTTaGCTGAACTCAGAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSRGSIT*LNSEGS
Trigger: TGAACCTTCTGAGTTCAGCAAAGTGATGGAACCCCT...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACAAGTCCATGGATTGTCTaGTTCCAGTGGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: LLGRRGTILWVSLLQVPTSPWIV*FQWLLE
Trigger: CTCCAAGAGCCACTGGAACAAGACAATCCATGGACT...TGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCAACTCTTCCGCCCGCTaGTGCGCCTCCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGNSSAR*CASSAL
Trigger: CAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTT...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGCTGCTCACCAAAGACAGGGCACGGGGTAGGGTGTTTATTCATCCCTCCCCGGGGGCTTGACATAACTTaGGTGAGAATAATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: CCSPKTGHGVGCLFIPPRGLDIT*VRIISC
Trigger: GCAGGAGATTATTCTCACCAAAGTTATGTCAAGCCC...CCGGGGAGGGATGAATAAACACCCTACCCCGTGCCCTGTCTTTGGTGAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GTTGGCAGGAGCCATGCTTGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTTTCACCTCCTTGAATTaGAGGTCACTGAGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: VGRSHAWGTAPCFLLSSFFTSLN*RSLSGS
Trigger: AGACCCACTCAGTGACCTCAAATTCAAGGAGGTGAA...AAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCAAC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCGTCTTGGGCCAAAACTaGAGAAGTCCCACAATTACC +
Preference number: 5 (lower is better)
Translates to: TPFGEKRDHSVGVPASSAVLGQN*RSPTIT
Trigger: GGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGAC...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CAGAATCTCCTCCAGCTCATTCAAGAACATCACCTCCTTGGGGCTGTGGGTCTTAGGACTCGGGCAGCATaGTCACTTATCAGGCTCATG +
Preference number: 5 (lower is better)
Translates to: QNLLQLIQEHHLLGAVGLRTRAA*SLIRLM
Trigger: CATGAGCCTGATAAGTGACAATGCTGCCCGAGTCCT...AAGACCCACAGCCCCAAGGAGGTGATGTTCTTGAATGAGCTGGAGGAGATTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTAGTCCATGGATTGTCTaGTTCCAGTGGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCSPWIV*FQWLLE
Trigger: CTCCAAGAGCCACTGGAACAAGACAATCCATGGACT...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCCACAAGATCAGTCCATGGATaGTCTTGTTCCAGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: LLGRRGTILWVSLLQVPTRSVHG*SCSSGS
Trigger: AGAGCCACTGGAACAAGACAATCCATGGACTGATCT...TGTGGGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTCCTATACTTTTCTCCTTTaGACCTCCCTTGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: PSPAPLGPSGPYIHQLLSYTFLL*TSLGQA
Trigger: TGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATA...GGACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCCCTCCCCGGCCCCACTaGGTCCATCTGGGCCCTATA +
Preference number: 5 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTPPRPH*VHLGPI
Trigger: TATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGG...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTGGCAGGAGCCATGCTaGGGGCACCGCTCCCTGCTT +
Preference number: 5 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPWQEPC*GHRSLL
Trigger: AAGCAGGGAGCGGTGCCCCAAGCATGGCTCCTGCCA...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTGGCTGAGACTGGGCTaGGGGCTGGGGCTCCTCAGT +
Preference number: 5 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYWLRLG*GLGLLS
Trigger: ACTGAGGAGCCCCAGCCCCAAGCCCAGTCTCAGCCA...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472118.5
CDS CCA 90 bp AGAATCTCCTCCAGCTCATTCAAGAACATCACCTCCTTGGGGCTGTaGGTCTTGGGCCAAAACTTGAGAAGTCCCACAATTACCTGGGAG +
Preference number: 5 (lower is better)
Translates to: RISSSSFKNITSLGL*VLGQNLRSPTITWE
Trigger: CTCCCAGGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGACCCACAGCCCCAAGGAGGTGATGTTCTTGAATGAGCTGGAGGAGATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS-3UTR CAA 90 bp TGGTCGATGTACTTCTTGGCTATGTTTGGCTGGAAATCAGGAGACTCAAGGAAACCCGAGCTGCTAGGCTaGGCTGTGCATTTGGCAACC +
Preference number: 5 (lower is better)
Translates to: WSMYFLAMFGWKSGDSRKPELLG*AVHLAT
Trigger: GGTTGCCAAATGCACAGCCAAGCCTAGCAGCTCGGG...TTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACATCGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCGCCTCCACCATCCTaGCCCGAGCTGCTAGGCTTG +
Preference number: 5 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTSPPPS*PELLGL
Trigger: CAAGCCTAGCAGCTCGGGCAAGGATGGTGGAGGCGA...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCGGGGGCGGCGTGCTATaGCTGGGACGCTTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTGGGVL*LGRLLD
Trigger: ATCCAACAAGCGTCCCAGCAATAGCACGCCGCCCCC...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCGAAGCGGGAGGAGCTTaGCCGTCGCTCCTTCTTGAC +
Preference number: 5 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFEAGGA*PSLLLD
Trigger: GTCAAGAAGGAGCGACGGCAAAGCTCCTCCCGCTTC...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230402.10
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCTGCAGCTCCCGATTCTaGCTGAGGTTGAAGCGGGAG +
Preference number: 5 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGCSSRF*LRLKRE
Trigger: CTCCCGCTTCAACCTCAGCAAGAATCGGGAGCTGCA...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTGTCTTGGGCCAAAACTaGAGAAGTCCCACAATTACC +
Preference number: 5 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCVLGQN*RSPTIT
Trigger: GGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGAC...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTGGGCTAGAGACACACTaGGCCAGCTGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPGLETH*ASWRKR
Trigger: CCTCTTCCGCCAGCTGGCCAAGTGTGTCTCTAGCCC...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGAGGACTCGGGCAGCATaGTCACTTATCAGGCTCATG +
Preference number: 5 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLRTRAA*SLIRLM
Trigger: CATGAGCCTGATAAGTGACAATGCTGCCCGAGTCCT...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AGCACAAACAAGGAAATAAATAGGTGTTGGCAGGAGCCATGCTTGGGGCACCGCAGTCCATGGATTGTCTaGTTCCAGTGGCTCTTGGAG +
Preference number: 5 (lower is better)
Translates to: STNKEINRCWQEPCLGHRSPWIV*FQWLLE
Trigger: CTCCAAGAGCCACTGGAACAAGACAATCCATGGACT...GCGGTGCCCCAAGCATGGCTCCTGCCAACACCTATTTATTTCCTTGTTTGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGCGCCTCCAGTGCCTaGATGGTGTACACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSCASSA*MVYTSW
Trigger: CCAGGACGTGTACACCATCAAGGCACTGGAGGCGCA...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGTACTTCTTGGCTATGTTTGGCTGGAAATCAGGAGACTCAAGGAAACGTAAGAAACTCTTCCGCCCGCTaGTGCGCCTCCAGTGCCTTG +
Preference number: 5 (lower is better)
Translates to: CTSWLCLAGNQETQGNVRNSSAR*CASSAL
Trigger: CAAGGCACTGGAGGCGCACAAGCGGGCGGAAGAGTT...TCTTACGTTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp ACACCTTTTGGGGAGAAGAGGGACCATTCTGTGGGTGTCCCTGCTTCAAGTGCCTATACTTTTCTCCTTTaGACCTCCCTTGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: TPFGEKRDHSVGVPASSAYTFLL*TSLGQA
Trigger: TGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATA...GGCACTTGAAGCAGGGACACCCACAGAATGGTCCCTCTTCTCCCCAAAAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTGCGCCTCCAGTGCCTaGATGGTGTACACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPCASSA*MVYTSW
Trigger: CCAGGACGTGTACACCATCAAGGCACTGGAGGCGCA...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ATCCCTCCCCGGCCCCACTTGGTCCATCTGGGCCCTATATTCATCAGTTATTGTGGGCTTGACATAACTTaGGTGAGAATAATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: IPPRPHLVHLGPIFISYCGLDIT*VRIISC
Trigger: GCAGGAGATTATTCTCACCAAAGTTATGTCAAGCCC...ACAATAACTGATGAATATAGGGCCCAGATGGACCAAGTGGGGCCGGGGAGGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGGGGCACCGCTCCCTGCTTCCTTCTTTCTAGTTTTGGGAACCAACAGCACAGATATACTTTTCTCCTTTaGACCTCCCTTGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: WGTAPCFLLSSFGNQQHRYTFLL*TSLGQA
Trigger: TGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATA...TCTGTGCTGTTGGTTCCCAAAACTAGAAAGAAGGAAGCAGGGAGCGGTGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTAGCCACAGGGAGGCATGAATGGTCGATGTACTTCTaGGCTATGTTTGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: LSTKHLSAQPVLATGRHEWSMYF*AMFGWK
Trigger: TTTCCAGCCAAACATAGCCAAGAAGTACATCGACCA...TTCATGCCTCCCTGTGGCTAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp CAGGCATCCCCAGGTTGTCTGAGCACTAAGCATCTTAGTGCTCAGCCTGTACTATGGTCGATGTACTTCTaGGCTATGTTTGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: QASPGCLSTKHLSAQPVLWSMYF*AMFGWK
Trigger: TTTCCAGCCAAACATAGCCAAGAAGTACATCGACCA...TAGTACAGGCTGAGCACTAAGATGCTTAGTGCTCAGACAACCTGGGGATGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTGGCAGGGCAAAGCCATaGATGATGCTGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPGRAKP*MMLPRI
Trigger: GATCCTGGGCAGCATCATCAATGGCTTTGCCCTGCC...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACGGCAGGGCAAAGCCATaGATGATGCTGCCCAGGATC +
Preference number: 5 (lower is better)
Translates to: VQMRMKGRIEERMYSCVYGRAKP*MMLPRI
Trigger: GATCCTGGGCAGCATCATCAATGGCTTTGCCCTGCC...GTACACACAGGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AGACCCACTTTATTCAGTTCTGTACATATGGGGACATCGGTCCAAGCCCAACCCAGGGGTTCCATCACTTaGCTGAACTCAGAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: RPTLFSSVHMGTSVQAQPRGSIT*LNSEGS
Trigger: TGAACCTTCTGAGTTCAGCAAAGTGATGGAACCCCT...GGGTTGGGCTTGGACCGATGTCCCCATATGTACAGAACTGAATAAAGTGGGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GTCAGGCATGGGGTAAGAAGAAATAATACAACCCTATCTGCCAGCACACGGCTGAGATCAGTCCATGGATaGTCTTGTTCCAGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: VRHGVRRNNTTLSASTRLRSVHG*SCSSGS
Trigger: AGAGCCACTGGAACAAGACAATCCATGGACTGATCT...CAGCCGTGTGCTGGCAGATAGGGTTGTATTATTTCTTCTTACCCCATGCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACTGCGCCTCCAGTGCCTaGATGGTGTACACGTCCTGG +
Preference number: 5 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDCASSA*MVYTSW
Trigger: CCAGGACGTGTACACCATCAAGGCACTGGAGGCGCA...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGGTAGCTGTGGGTGGGCTTGACATAACTTaGGTGAGAATAATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ERMYSCVYFSEQPQVAVGGLDIT*VRIISC
Trigger: GCAGGAGATTATTCTCACCAAAGTTATGTCAAGCCC...ACCCACAGCTACCTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS GCA 90 bp CCCGTTTCTTTGCCTTGGATCTGTTTCCTAGGTGTATATAGGTTTTaGTTCCCCTTCAGAGAGGAAACCATGTTACCGGTCAGGTCACAG +
Preference number: 5 (lower is better)
Translates to: PVSLPWICFLGVYRF*FPFREETMLPVRSQ
Trigger: CTGTGACCTGACCGGTAACATGGTTTCCTCTCTGAAGGGGAAGCAAAACCTATATACACCTAGGAAACAGATCCAAGGCAAAGAAACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS-3UTR CAA 90 bp TCCATCTGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTCGATTCTTGCTGAGGTaGAAGCGGGAGGAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: SIWALYSSVIVHSLYFSPRFLLR*KREELC
Trigger: GCAAAGCTCCTCCCGCTTCAACCTCAGCAAGAATCG...AGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCAGATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTCCTCCCGCTCCTGGGTaGGCGAATCTTTCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLPPAPG*ANLSGQ
Trigger: CTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAGG...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGTTCACCTCCTTGAATTaGAGGTCACTGAGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GRIEERMYSCVYFSEQPQFTSLN*RSLSGS
Trigger: AGACCCACTCAGTGACCTCAAATTCAAGGAGGTGAA...CTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGGCTAGAGACACACTaGGCCAGCTGGCGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLGLETH*ASWRKR
Trigger: CCTCTTCCGCCAGCTGGCCAAGTGTGTCTCTAGCCC...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp AAGGTACCTATAAGGGACAAGAGAAGGCCTGCCCAGCATAGCACAAACAAGGAAAGATCAGTCCATGGATaGTCTTGTTCCAGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: KVPIRDKRRPAQHSTNKERSVHG*SCSSGS
Trigger: AGAGCCACTGGAACAAGACAATCCATGGACTGATCT...TTCCTTGTTTGTGCTATGCTGGGCAGGCCTTCTCTTGTCCCTTATAGGTACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCTTCACCTCCTTGAATTaGAGGTCACTGAGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGFTSLN*RSLSGS
Trigger: AGACCCACTCAGTGACCTCAAATTCAAGGAGGTGAA...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGAAGAATAGAGGAGCGTATGTATTCCTGTGTGTACTTCTCAGAGCAGCCTCAGACTTCTTGGCTATGTTaGGCTGGAAATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: GRIEERMYSCVYFSEQPQTSWLC*AGNQET
Trigger: AGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGT...CTGAGGCTGCTCTGAGAAGTACACACAGGAATACATACGCTCCTCTATTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCGTCTTGGGCCAAAACTaGAGAAGTCCCACAATTACC +
Preference number: 5 (lower is better)
Translates to: THLSMYHSVENKAPYVHSVLGQN*RSPTIT
Trigger: GGTAATTGTGGGACTTCTCAAGTTTTGGCCCAAGAC...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ACCCACCTTAGCATGTATCACTCTGTGGAGAATAAAGCACCCTATGTACACAGCTGGTCGATGTACTTCTaGGCTATGTTTGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: THLSMYHSVENKAPYVHSWSMYF*AMFGWK
Trigger: TTTCCAGCCAAACATAGCCAAGAAGTACATCGACCA...GCTGTGTACATAGGGTGCTTTATTCTCCACAGAGTGATACATGCTAAGGTGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCAGATCAGTCCATGGATaGTCTTGTTCCAGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: DTWRSNEDEGKNRGAYVFRSVHG*SCSSGS
Trigger: AGAGCCACTGGAACAAGACAATCCATGGACTGATCT...GAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTCAGGCGGGCTTGACATAACTTaGGTGAGAATAATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: SVIVHSLYFSPFDLPWSGGLDIT*VRIISC
Trigger: GCAGGAGATTATTCTCACCAAAGTTATGTCAAGCCC...GCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ATACCTGGCGTTCAAATGAGGATGAAGGGAAGAATAGAGGAGCGTATGTATTCCACTTCTTGGCTATGTTaGGCTGGAAATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: IPGVQMRMKGRIEERMYSTSWLC*AGNQET
Trigger: AGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGT...GGAATACATACGCTCCTCTATTCTTCCCTTCATCCTCATTTGAACGCCAGGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCGGATGAGGAACATCTaGTGCTCTTCTTTAAGGGGC +
Preference number: 5 (lower is better)
Translates to: WALYSSVIVHSLYFSPFDRMRNI*CSSLRG
Trigger: GCCCCTTAAAGAAGAGCACAAGATGTTCCTCATCCG...GTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp GGGCCCTATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCAGGGGTTCCATCACTTaGCTGAACTCAGAAGGTTCA +
Preference number: 5 (lower is better)
Translates to: GPYIHQLLSTAYTFLLLTRGSIT*LNSEGS
Trigger: TGAACCTTCTGAGTTCAGCAAAGTGATGGAACCCCT...GGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATAGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTTTCACCTCCTTGAATTaGAGGTCACTGAGTGGGTCT +
Preference number: 5 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGFTSLN*RSLSGS
Trigger: AGACCCACTCAGTGACCTCAAATTCAAGGAGGTGAA...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TGTACTTCTTGGCTATGTTTGGCTGGAAATCAGGAGACTCAAGGAAACGTAAGATATACTTTTCTCCTTTaGACCTCCCTTGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: CTSWLCLAGNQETQGNVRYTFLL*TSLGQA
Trigger: TGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATA...TCTTACGTTTCCTTGAGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS-3UTR CAA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTACTTCTTGGCTATGTTaGGCTGGAAATCAGGAGACT +
Preference number: 5 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGTSWLC*AGNQET
Trigger: AGTCTCCTGATTTCCAGCCAAACATAGCCAAGAAGT...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp ATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTGGTGGGCTTGACATAACTTaGGTGAGAATAATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: IHQLLSTAYTFLLLTSLGGLDIT*VRIISC
Trigger: GCAGGAGATTATTCTCACCAAAGTTATGTCAAGCCC...ACCAAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTTGGTCGATGTACTTCTaGGCTATGTTTGGCTGGAAA +
Preference number: 5 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLWSMYF*AMFGWK
Trigger: TTTCCAGCCAAACATAGCCAAGAAGTACATCGACCA...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS-3UTR CAA 90 bp TATATTCATCAGTTATTGTCCACAGCCTATACTTTTCTCCTTTTGACCTCCCTTTATACTTTTCTCCTTTaGACCTCCCTTGGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: YIHQLLSTAYTFLLLTSLYTFLL*TSLGQA
Trigger: TGCCTGACCAAGGGAGGTCAAAAGGAGAAAAGTATA...AAGGGAGGTCAAAAGGAGAAAAGTATAGGCTGTGGACAATAACTGATGAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000230402.10
ENST00000394110.7
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS CAA 90 bp GTCCGGACCCGGCCCGTCTCCTGCGGCCCCGCTCCGGCTCCGGCTTaGCTCGGCCGCACTCGGCCCGCTCGGCGTCTCTTCGCCACCGCC +
Preference number: 6 (lower is better)
Translates to: VRTRPVSCGPAPAPA*LGRTRPARRLFATA
Trigger: GGCGGTGGCGAAGAGACGCCGAGCGGGCCGAGTGCGGCCGAGCAAAGCCGGAGCCGGAGCGGGGCCGCAGGAGACGGGCCGGGTCCGGAC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS CAA 72 bp CGGCCCGTCTCCTGCGGCCCCGCTCCGGCTCCGGCTTaGCTCGGCCGCACTCGGCCCGCTCGGCGTCTCTTC +
Preference number: 6 (lower is better)
Translates to: RPVSCGPAPAPA*LGRTRPARRLF
Trigger: GAAGAGACGCCGAGCGGGCCGAGTGCGGCCGAGCAAAGCCGGAGCCGGAGCGGGGCCGCAGGAGACGGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394110.7
ENST00000472118.5
ENST00000485511.6
CDS CAA 72 bp GGCTGGGGCTCCTCAGTGTTCTCGCCTCCACCATCCTaGCCCGAGCTGCTAGGCTTGGCTGTGCATTTGGCA +
Preference number: 6 (lower is better)
Translates to: GWGSSVFSPPPS*PELLGLAVHLA
Trigger: TGCCAAATGCACAGCCAAGCCTAGCAGCTCGGGCAAGGATGGTGGAGGCGAGAACACTGAGGAGCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472118.5
CDS CAA 90 bp CTGGTCAAACAAGTCACCTCCTCAGTGTTCTCGCCTCCACCATCCTaGCCCGAGCTGCTAGGCTTGGCTGTGCATTTGGCAACCTTGGGG +
Preference number: 6 (lower is better)
Translates to: LVKQVTSSVFSPPPS*PELLGLAVHLATLG
Trigger: CCCCAAGGTTGCCAAATGCACAGCCAAGCCTAGCAGCTCGGGCAAGGATGGTGGAGGCGAGAACACTGAGGAGGTGACTTGTTTGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS CAA 90 bp AGTAGGTACAGACTGGCAAGTGATGCTGACAGTAAGAGGTGGGCCTaGGGGCCCGGAAGGGGAATTACCGGCTCAGTCAGACTGCTCTCC +
Preference number: 6 (lower is better)
Translates to: SRYRLASDADSKRWA*GPGRGITGSVRLLS
Trigger: GGAGAGCAGTCTGACTGAGCCGGTAATTCCCCTTCCGGGCCCCAAGGCCCACCTCTTACTGTCAGCATCACTTGCCAGTCTGTACCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS GCA 72 bp TTGCACCTGCCTAGGTCACCAGGAAGTTTTCCTACCTaGTCTCTCCCCCACCCTGGTGGGCACAGTTTGGGT +
Preference number: 6 (lower is better)
Translates to: LHLPRSPGSFPT*SLPHPGGHSLG
Trigger: ACCCAAACTGTGCCCACCAGGGTGGGGGAGAGAGCAGGTAGGAAAACTTCCTGGTGACCTAGGCAGGTGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS CAA 72 bp CAAGTCACCTCCTCAGTGTTCTCGCCTCCACCATCCTaGCCCGAGCTGCTAGGCTTGGCTGTGCATTTGGCA +
Preference number: 6 (lower is better)
Translates to: QVTSSVFSPPPS*PELLGLAVHLA
Trigger: TGCCAAATGCACAGCCAAGCCTAGCAGCTCGGGCAAGGATGGTGGAGGCGAGAACACTGAGGAGGTGACTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000230402.10
CDS CAA 72 bp TCTTTCAGGGCAGGAAGCTTCTGCAGCTCCCGATTCTaGCTGAGGTTGAAGCGGGAGGAGCTTTGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: SFRAGSFCSSRF*LRLKREELCRR
Trigger: GCGACGGCAAAGCTCCTCCCGCTTCAACCTCAGCAAGAATCGGGAGCTGCAGAAGCTTCCTGCCCTGAAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS CAA 90 bp GTTGGCGAATCTTTCAGGGCAGGAAGCTTCTGCAGCTCCCGATTCTaGCTGAGGTTGAAGCGGGAGGAGCTTTGCCGTCGCTCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: VGESFRAGSFCSSRF*LRLKREELCRRSFL
Trigger: CAAGAAGGAGCGACGGCAAAGCTCCTCCCGCTTCAACCTCAGCAAGAATCGGGAGCTGCAGAAGCTTCCTGCCCTGAAAGATTCGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS TCA 72 bp GAGGAAACCATGTTACCGGTCAGGTCACAGCCCTCCTaGGTTCCCCCTTATGGCACCCCCAGTAGGTACAGA +
Preference number: 6 (lower is better)
Translates to: EETMLPVRSQPS*VPPYGTPSRYR
Trigger: TCTGTACCTACTGGGGGTGCCATAAGGGGGAACTCAGGAGGGCTGTGACCTGACCGGTAACATGGTTTCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS CCA 72 bp TGGCGTAGCTTCTGGATAAACAGCTCCTCCCGCTCCTaGGTTGGCGAATCTTTCAGGGCAGGAAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: WRSFWINSSSRS*VGESFRAGSFC
Trigger: GCAGAAGCTTCCTGCCCTGAAAGATTCGCCAACCCAGGAGCGGGAGGAGCTGTTTATCCAGAAGCTACGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000230402.10
ENST00000470467.5
ENST00000472118.5
ENST00000485511.6
CDS CAA 90 bp TCTTTCAGGGCAGGAAGCTTCTGCAGCTCCCGATTCTTGCTGAGGTaGAAGCGGGAGGAGCTTTGCCGTCGCTCCTTCTTGACAATCTGG +
Preference number: 6 (lower is better)
Translates to: SFRAGSFCSSRFLLR*KREELCRRSFLTIW
Trigger: CCAGATTGTCAAGAAGGAGCGACGGCAAAGCTCCTCCCGCTTCAACCTCAGCAAGAATCGGGAGCTGCAGAAGCTTCCTGCCCTGAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000230402.10
ENST00000472118.5
ENST00000485511.6
CDS GCA 72 bp GAGATGGAGGGAAGGAATTATCCCACCTGCTCCCTATaGTTCCCCTATCCCAGCTGGAACACTTTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: EMEGRNYPTCSL*FPYPSWNTFLP
Trigger: CGGCAGGAAAGTGTTCCAGCTGGGATAGGGGAAGCATAGGGAGCAGGTGGGATAATTCCTTCCCTCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS TCA 72 bp GTATGCCAGCTGCAAAGGTGTGAGGTAGAAGGGAGGTaGGGTGTAGGTCCTAGAAGCTCTCAGAGAAGTCAG +
Preference number: 6 (lower is better)
Translates to: VCQLQRCEVEGR*GVGPRSSQRSQ
Trigger: CTGACTTCTCTGAGAGCTTCTAGGACCTACACCTCACCTCCCTTCTACCTCACACCTTTGCAGCTGGCATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS TCA 72 bp TGGAACACTTTCCTGCCGGCTCTTTTCTCTGCTGCCTaGGTTGGACATTATAAGGAGGAAGGCAGCTCACCT +
Preference number: 6 (lower is better)
Translates to: WNTFLPALFSAA*VGHYKEEGSSP
Trigger: AGGTGAGCTGCCTTCCTCCTTATAATGTCCAACTCAGGCAGCAGAGAAAAGAGCCGGCAGGAAAGTGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS GCA 72 bp TTGCCTTGGATCTGTTTCCTAGGTGTATATAGGTTTTaGTTCCCCTTCAGAGAGGAAACCATGTTACCGGTC +
Preference number: 6 (lower is better)
Translates to: LPWICFLGVYRF*FPFREETMLPV
Trigger: GACCGGTAACATGGTTTCCTCTCTGAAGGGGAAGCAAAACCTATATACACCTAGGAAACAGATCCAAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676174.1
CDS CAA 72 bp GCAAAGCCATTGATGATGCTAGGAATTAAGGGACATTaGTTAGGACCAGAGGGTCAGATCCAAGTTCAGTAC +
Preference number: 6 (lower is better)
Translates to: AKPLMMLGIKGH*LGPEGQIQVQY
Trigger: GTACTGAACTTGGATCTGACCCTCTGGTCCTAACAAATGTCCCTTAATTCCTAGCATCATCAATGGCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482315.1