RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP2R3C (Homo sapiens)

Ensembl gene IDs: ENSG00000092020

Ensembl transcript IDs: ENST00000553273.5, ENST00000553282.1, ENST00000554222.5, ENST00000554265.5, ENST00000554488.5, ENST00000554899.5, ENST00000555219.1, ENST00000555630.5, ENST00000555644.5, ENST00000555726.5, ENST00000556254.1, ENST00000557074.1, ENST00000557217.5, ENST00000557278.1, ENST00000557288.1

Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTaGAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAA +
Preference number: 1 (lower is better)
Translates to: QRSCIIKVCRVFTVI*NKSLSVLVSPEAIQ
Trigger: TTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR GCA 90 bp AAGGAGTTTAGCAAAGACTTTTGCTGTGAAAAATTGCTTGCACTTTGCTCCAGCTCCCGAAGGTACCCCTaGCCAGCGACATCATATAAA +
Preference number: 2 (lower is better)
Translates to: KEFSKDFCCEKLLALCSSSRRYP*PATSYK
Trigger: TTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGA...GCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGCTAAACTCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR GCA 90 bp CTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAAATTGCTTGCACTTTaGTCCAGCCTTTTCACCAAC +
Preference number: 2 (lower is better)
Translates to: LQSFHCHLQQEPLCSRKSKLLAL*SSLFTN
Trigger: GTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTT...GGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR CAA 90 bp TCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTaGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCA +
Preference number: 2 (lower is better)
Translates to: SEIMYHQGLQSFHCH*QQEPLCSRKSRSHS
Trigger: TGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR GCA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCCCGAAGGTACCCCTaGCCAGCGACATCATATAAA +
Preference number: 2 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLSRRYP*PATSYK
Trigger: TTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGA...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR CCA 90 bp CAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: QSSLSEIMYHQGLQSFHCLSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...ACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CCA 90 bp AAGGAGTTTAGCAAAGACTTTTGCTGTGAAAAATTGCTTGCACTTTGCTCCAGCCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: KEFSKDFCCEKLLALCSSLSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...GCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGCTAAACTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR TCA 90 bp AAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTACTTGACATCTTGAAATaGAACAGGATCTTGTCCATG +
Preference number: 2 (lower is better)
Translates to: KVCRVFTVICNKSLSVLVLDILK*NRILSM
Trigger: CATGGACAAGATCCTGTTTCATTTCAAGATGTCAAG...TACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR TCA 90 bp GGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGGTTACTGTGTCTCCTTaGTTACTGTTGATTAAATCC +
Preference number: 2 (lower is better)
Translates to: GLQSFHCHLQQEPLCSRKVTVSP*LLLIKS
Trigger: GGATTTAATCAACAGTAATCAAGGAGACACAGTAAC...CTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR TCA 90 bp TCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGGTTACTGTGTCTCCTTaGTTACTGTTGATTAAATCC +
Preference number: 2 (lower is better)
Translates to: SRSAEFSLSFATRASLFSVTVSP*LLLIKS
Trigger: GGATTTAATCAACAGTAATCAAGGAGACACAGTAAC...CGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR TCA 90 bp GAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGAAAAGTTTTCGTAATTaGTCATCGCTTCCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: EPLCSRKSRSHSNRLEWWKSFRN*SSLPLQ
Trigger: TTGGAGAGGAAGCGATGATCAATTACGAAAACTTTT...CCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR GCA 90 bp TATCAAGATTCAAGTACTGGCCATAAACTCTTAGGGCAGAAGGAGCAGAAAACCTTTGCTGTGAAAAATTaGTTGCACTTTGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: YQDSSTGHKLLGQKEQKTFAVKN*LHFAPA
Trigger: GGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAA...GGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CCA 90 bp AGGAGTTTAGCAAAGACTTTTGCTGTGAAAAATTGCTTGCACTTTGCTCCAGCCATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: RSLAKTFAVKNCLHFAPAIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...GGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGCTAAACTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR CCA 90 bp CTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 2 (lower is better)
Translates to: LVFQRSCIIKVCRVFTVILSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...AATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR TCA 90 bp GAGCAGAAAACCAATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCCCTTACTTGACATCTTGAAATaGAACAGGATCTTGTCCATG +
Preference number: 2 (lower is better)
Translates to: EQKTNLFLDSPWTVPHPLLDILK*NRILSM
Trigger: CATGGACAAGATCCTGTTTCATTTCAAGATGTCAAG...TAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR TCA 90 bp CATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGAGTTACTGTGTCTCCTTaGTTACTGTTGATTAAATCC +
Preference number: 2 (lower is better)
Translates to: HLQQEPLCSRKSRSHSNRVTVSP*LLLIKS
Trigger: GGATTTAATCAACAGTAATCAAGGAGACACAGTAAC...TCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR GCA 90 bp CTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCGAAGAACTTCCTAACTaGTGTACAAACATAAAAGGA +
Preference number: 2 (lower is better)
Translates to: LQSFHCHLQQEPLCSRKSEELPN*CTNIKG
Trigger: TCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTC...GGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CCA 90 bp AAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAACAGGATCTTGTCCATaGATTTTCATTAGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: KVCRVFTVICNKSLSVLVTGSCP*IFISSC
Trigger: ACAGGAACTAATGAAAATCCATGGACAAGATCCTGT...TACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR CCA 90 bp TCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCAATCGATTAGAATGGTaGTTACTGTGTCTCCTTGAT +
Preference number: 2 (lower is better)
Translates to: SSRSAEFSLSFATRASLFNRLEW*LLCLLD
Trigger: ATCAAGGAGACACAGTAACCACCATTCTAATCGATT...GAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR TCA 90 bp GTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCCTTGACATCTTGAAATaGAACAGGATCTTGTCCATG +
Preference number: 2 (lower is better)
Translates to: VFQRSCIIKVCRVFTVICLDILK*NRILSM
Trigger: CATGGACAAGATCCTGTTTCATTTCAAGATGTCAAG...GCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR TCA 90 bp GAGCAGAAAACCAATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCCCTTAGTTACTGTGTCTCCTTaGTTACTGTTGATTAAATCC +
Preference number: 2 (lower is better)
Translates to: EQKTNLFLDSPWTVPHPLVTVSP*LLLIKS
Trigger: GGATTTAATCAACAGTAATCAAGGAGACACAGTAAC...TAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR TCA 90 bp AGAAGGAGCAGAAAACCAATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCCAAAGACTTTTGCTGTaGAAAATTGCTTGCACTTTG +
Preference number: 2 (lower is better)
Translates to: RRSRKPICFLTLLGQFLIQRLLL*KIACTL
Trigger: CAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTG...GATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTCCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR GCA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTAAAATTGCTTGCACTTTaGTCCAGCCTTTTCACCAAC +
Preference number: 2 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLKLLAL*SSLFTN
Trigger: GTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTT...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR GCA 90 bp AATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCCCTTAGCTCCAATAAATTTTGCTGTGAAAAATTaGTTGCACTTTGCTCCAGCC +
Preference number: 2 (lower is better)
Translates to: NLFLDSPWTVPHPLAPINFAVKN*LHFAPA
Trigger: GGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAA...ATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CCA 90 bp TCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: SFRDHVSSRSAEFSLSFAIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...TGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CCA 90 bp GAAACAGGATCTTGTCCATGGATTTTCATTAGTTCCTGTATGGCCCTAAAGAAAATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: ETGSCPWIFISSCMALKKIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...TTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR GCA 90 bp GACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTTGTATCATCAAGGTCTaGAGAGTTTTCACTGTCATT +
Preference number: 2 (lower is better)
Translates to: DSLVFQRSCIIKVCRVFTCIIKV*RVFTVI
Trigger: AATGACAGTGAAAACTCTGCAGACCTTGATGATACA...AGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR CCA 90 bp CAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTACAGGATCTTGTCCATaGATTTTCATTAGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: QSSLSEIMYHQGLQSFHCTGSCP*IFISSC
Trigger: ACAGGAACTAATGAAAATCCATGGACAAGATCCTGT...ACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR CCA 90 bp GAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGACAGGATCTTGTCCATaGATTTTCATTAGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: EIMYHQGLQSFHCHLQQETGSCP*IFISSC
Trigger: ACAGGAACTAATGAAAATCCATGGACAAGATCCTGT...CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR CCA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR CCA 90 bp GTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 2 (lower is better)
Translates to: VVSGVCPAKTISSVILHYIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...ATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR TCA 90 bp GTTCCTTTCTGTTTTCTAATGCAAGGACAAAGTCCAAGTAGGTCTTATAGTCCACCATATGAATCTGTATaGAGGAGTTTAGCAAAGACT +
Preference number: 2 (lower is better)
Translates to: VPFCFLMQGQSPSRSYSPPYESV*RSLAKT
Trigger: AGTCTTTGCTAAACTCCTTCATACAGATTCATATGG...TGGACTATAAGACCTACTTGGACTTTGTCCTTGCATTAGAAAACAGAAAGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR GCA 90 bp GTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCGAAGAACTTCCTAACTaGTGTACAAACATAAAAGGA +
Preference number: 2 (lower is better)
Translates to: VFQRSCIIKVCRVFTVICEELPN*CTNIKG
Trigger: TCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTC...GCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CCA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGACAGGATCTTGTCCATaGATTTTCATTAGTTCCTGT +
Preference number: 2 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRTGSCP*IFISSC
Trigger: ACAGGAACTAATGAAAATCCATGGACAAGATCCTGT...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR TCA 90 bp TCTCATAATATAAGACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCTTGACATCTTGAAATaGAACAGGATCTTGTCCATG +
Preference number: 2 (lower is better)
Translates to: SHNIRQSSLSEIMYHQGLLDILK*NRILSM
Trigger: CATGGACAAGATCCTGTTTCATTTCAAGATGTCAAG...CAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTATATTATGAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR TCA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAAAAGTTTTCGTAATTaGTCATCGCTTCCTCTCCAA +
Preference number: 2 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSKSFRN*SSLPLQ
Trigger: TTGGAGAGGAAGCGATGATCAATTACGAAAACTTTT...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR TCA 90 bp TCTCATAATATAAGACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCTCCTTGATTACTGTTaGTTAAATCCTGAAGAGAGA +
Preference number: 2 (lower is better)
Translates to: SHNIRQSSLSEIMYHQGLLLDYC*LNPEER
Trigger: TCTCTCTTCAGGATTTAATCAACAGTAATCAAGGAG...CAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTATATTATGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR TCA 90 bp TCTCATAATATAAGACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAAAGACTTTTGCTGTaGAAAATTGCTTGCACTTTG +
Preference number: 2 (lower is better)
Translates to: SHNIRQSSLSEIMYHQGLQRLLL*KIACTL
Trigger: CAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTG...CAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTATATTATGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CAA 90 bp CACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCACGGTCTAAGAAGACATaGGTCATGGTAGCTGTTCCA +
Preference number: 3 (lower is better)
Translates to: HCHLQQEPLCSRKSRSHSRSKKT*VMVAVP
Trigger: TGGAACAGCTACCATGACCAATGTCTTCTTAGACCG...TGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CAA 90 bp AAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 3 (lower is better)
Translates to: KVCRVFTVICNKSLSVLVGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...TACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CAA 90 bp CTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGTTTTCACTGTCATTaGCAACAAGAGCCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: LQSFHCHLQQEPLCSRKSSFHCH*QQEPLC
Trigger: ACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACT...GGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR GCA 72 bp TGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTaGAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAA +
Preference number: 3 (lower is better)
Translates to: CIIKVCRVFTVI*NKSLSVLVSPE
Trigger: TTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR CAA 90 bp CAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTGTAGAAAGACAGCTCTaGATTCCTCTCTTAATTTCT +
Preference number: 3 (lower is better)
Translates to: QGLQSFHCHLQQEPLCSRVERQL*IPLLIS
Trigger: AGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTAC...ACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CAA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTAGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 3 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR CAA 90 bp GAAACAGGATCTTGTCCATGGATTTTCATTAGTTCCTGTATGGCCCTAAAGAAAGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 3 (lower is better)
Translates to: ETGSCPWIFISSCMALKKGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...TTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR TCA 72 bp CCAAGTAGGTCTTATAGTCCATTTCTCCATCATAAGTaGGACACTCCTGGAAAACACGGTCTAAGAAGACAT +
Preference number: 3 (lower is better)
Translates to: PSRSYSPFLHHK*DTPGKHGLRRH
Trigger: ATGTCTTCTTAGACCGTGTTTTCCAGGAGTGTCTCACTTATGATGGAGAAATGGACTATAAGACCTACTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
3UTR GCA 72 bp AGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTaGAGAGTTTTCACTGTCATTTGCAACAAGAGCCTC +
Preference number: 3 (lower is better)
Translates to: SLVFQRSCIIKV*RVFTVICNKSL
Trigger: GAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR CCA 72 bp TTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAAT +
Preference number: 3 (lower is better)
Translates to: LIIASSPIIGGV*CLSSKNHKFCN
Trigger: ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR CAA 90 bp GACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTAGTTTTCACTGTCATTaGCAACAAGAGCCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: DSLVFQRSCIIKVCRVFTSFHCH*QQEPLC
Trigger: ACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACT...AGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR CAA 90 bp CAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTAGTTTTCACTGTCATTaGCAACAAGAGCCTCTCTGT +
Preference number: 3 (lower is better)
Translates to: QSSLSEIMYHQGLQSFHCSFHCH*QQEPLC
Trigger: ACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACT...ACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR-3UTR CAA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 3 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR CAA 90 bp ATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTAAAATTGCTTGCACTTaGCTCCAGCCTTTTCACCAA +
Preference number: 3 (lower is better)
Translates to: IMYHQGLQSFHCHLQQEPKIACT*LQPFHQ
Trigger: TTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTT...AGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CAA 90 bp CAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTAAAATTGCTTGCACTTaGCTCCAGCCTTTTCACCAA +
Preference number: 3 (lower is better)
Translates to: QSSLSEIMYHQGLQSFHCKIACT*LQPFHQ
Trigger: TTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTT...ACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
3UTR-3UTR CAA 90 bp GTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 3 (lower is better)
Translates to: VSGVCPAKTISSVILHYLGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...TAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
3UTR-3UTR CAA 90 bp GTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATGTAGAAAGACAGCTCTaGATTCCTCTCTTAATTTCT +
Preference number: 3 (lower is better)
Translates to: VVSGVCPAKTISSVILHYVERQL*IPLLIS
Trigger: AGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTAC...ATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR GCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATTGTGCCTTTGGCGCGTaGGCACCACGTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHCAFGA*APRDPG
Trigger: TCCTGGGTCACGTGGTGCGCACGCGCCAAAGGCACA...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp GGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTGTGCCTTTGGCGCGTaGGCACCACGTGACCCAGGA +
Preference number: 4 (lower is better)
Translates to: GLQSFHCHLQQEPLCSRKCAFGA*APRDPG
Trigger: TCCTGGGTCACGTGGTGCGCACGCGCCAAAGGCACA...CTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp TTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAATGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: LIIASSPIIGGVWCLSSKCLDRC*ASLGAD
Trigger: GTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACA...TTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHCLDRC*ASLGAD
Trigger: GTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACA...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000555630.5
ENST00000555726.5
ENST00000557217.5
CDS-3UTR CCA 90 bp ATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATCTTCTTTCCAGTCCATaGCCGACTTCCGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: IASSPIIGGVWCLSSKNHLLSSP*PTSAQQ
Trigger: CTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAG...ATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATCTTCTTTCCAGTCCATaGCCGACTTCCGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHLLSSP*PTSAQQ
Trigger: CTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAG...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000555630.5
ENST00000557217.5
CDS-3UTR CCA 90 bp TTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAATCAGCAGGCAGTGTTTaGACAGGTGTTGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: LIIASSPIIGGVWCLSSKSAGSV*TGVGRR
Trigger: GCGACGCCCAACACCTGTCCAAACACTGCCTGCTGA...TTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATTCAGCAGGCAGTGTTTaGACAGGTGTTGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHSAGSV*TGVGRR
Trigger: GCGACGCCCAACACCTGTCCAAACACTGCCTGCTGA...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000555726.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCGTCCAACCACCATCTTaGTCGAGGGCGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LQSFHCHLQQEPLCSRKSVQPPS*SRAEVL
Trigger: CAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGAC...GGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp TCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCGTCCAACCACCATCTTaGTCGAGGGCGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: SSRSAEFSLSFATRASLFVQPPS*SRAEVL
Trigger: CAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGAC...GAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp ATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAATTGCTGTTTCCTACCTaGTCCACCCCTACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: IDHRFLSNHRWCLVFVQQLLFPT*STPTSS
Trigger: TGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAA...TTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp TCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTTGCTGTTTCCTACCTaGTCCACCCCTACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SRSAEFSLSFATRASLFSLLFPT*STPTSS
Trigger: TGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAA...CGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp CTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCTTTTCCTTTATCGTGTaGCTTTGGCGCGTGCGCACC +
Preference number: 4 (lower is better)
Translates to: LQSFHCHLQQEPLCSRKSFSFIV*LWRVRT
Trigger: GGTGCGCACGCGCCAAAGGCACACGATAAAGGAAAA...GGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNCLDRC*ASLGAD
Trigger: GTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACA...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp AGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: SLVFQRSCIIKVCRVFTVCLDRC*ASLGAD
Trigger: GTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACA...GACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTACACGGAATGAGGGGTaGGCAAGACAGCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSTRNEG*ARQPQP
Trigger: GGGCTGGGGCTGTCTTGCTCACCCCTCATTCCGTGT...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553282.1
CDS-3UTR TCA 90 bp CACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCATCATTAGTTCCGGCTTaGGGGAAGCGCCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: HCHLQQEPLCSRKSRSHSSLVPA*GKRLLS
Trigger: TGAAAGAAGGCGCTTCCCTCAAGCCGGAACTAATGA...TGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp ATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATTCCCGAAGGTACCCCTaGCCAGCGACATCATATAAA +
Preference number: 4 (lower is better)
Translates to: IASSPIIGGVWCLSSKNHSRRYP*PATSYK
Trigger: TTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGA...ATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR GCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATTCCCGAAGGTACCCCTaGCCAGCGACATCATATAAA +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHSRRYP*PATSYK
Trigger: TTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGA...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000555630.5
ENST00000555726.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATCTTCTTTCCAGTCCATaGCCGACTTCCGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNLLSSP*PTSAQQ
Trigger: CTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAG...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp AATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCCCTTAGCTCCAATAAATTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: NLFLDSPWTVPHPLAPINCLDRC*ASLGAD
Trigger: GTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACA...ATTTATTGGAGCTAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GTTCCTCATCCCTTAGCTCCAATAAATCATCTAGGAAGCTGCATGCTAAAATATTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: VPHPLAPINHLGSCMLKYCLDRC*ASLGAD
Trigger: GTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACA...ATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000555726.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGTCAGCAGGCAGTGTTTaGACAGGTGTTGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLSAGSV*TGVGRR
Trigger: GCGACGCCCAACACCTGTCCAAACACTGCCTGCTGA...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTCATTGCGGATATCTaGAAGCCTTCCAGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: EPLCSRKSRSHSNRLEWWFIADI*KPSRSP
Trigger: AGGGGACCTGGAAGGCTTCCAGATATCCGCAATGAA...CCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTCCAACCACCATCTTaGTCGAGGGCGGAAGTCTTG +
Preference number: 4 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLVQPPS*SRAEVL
Trigger: CAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGAC...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCGACAGCCCCAGCCCCTaGCCTCATGGAGTTTCAGCC +
Preference number: 4 (lower is better)
Translates to: CPAKTISSVILHYLTVLCDSPSP*PHGVSA
Trigger: GGCTGAAACTCCATGAGGTCAGGGGCTGGGGCTGTC...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553282.1
CDS-3UTR TCA 90 bp GTTCCTCATCCCTTAGCTCCAATAAATCATCTAGGAAGCTGCATGCTAAAATATCGCGTGCGCACCACGTaGCCCAGGAGTTCATTAGTT +
Preference number: 4 (lower is better)
Translates to: VPHPLAPINHLGSCMLKYRVRTT*PRSSLV
Trigger: AACTAATGAACTCCTGGGTCACGTGGTGCGCACGCG...ATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp AGAAGCCATTCAAATCGATTAGAATGGTGGTTACTGTGTCTCCTTGATTACTGTCGCGTGCGCACCACGTaGCCCAGGAGTTCATTAGTT +
Preference number: 4 (lower is better)
Translates to: RSHSNRLEWWLLCLLDYCRVRTT*PRSSLV
Trigger: AACTAATGAACTCCTGGGTCACGTGGTGCGCACGCG...ACAGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp AAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTATCCCGAAGGTACCCCTaGCCAGCGACATCATATAAA +
Preference number: 4 (lower is better)
Translates to: KVCRVFTVICNKSLSVLVSRRYP*PATSYK
Trigger: TTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGA...TACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATAGCAGCTTCTGCATTTaGTGTTTCCTACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHSSFCI*CFLPAP
Trigger: TGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTGCT...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000555630.5
ENST00000557217.5
CDS-3UTR GCA 90 bp GGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGAGCAGCTTCTGCATTTaGTGTTTCCTACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLQSFHCHLQQEPLCSRKSSFCI*CFLPAP
Trigger: TGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTGCT...CTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp CCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTATTTTCCTTTATCGTGTaGCTTTGGCGCGTGCGCACC +
Preference number: 4 (lower is better)
Translates to: PLCSRKSRSHSNRLEWWLFSFIV*LWRVRT
Trigger: GGTGCGCACGCGCCAAAGGCACACGATAAAGGAAAA...TAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp TCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATCTTCTTTCCAGTCCATaGCCGACTTCCGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SSLSEIMYHQGLQSFHCHLLSSP*PTSAQQ
Trigger: CTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAG...ATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: VVSGVCPAKTISSVILHYCLDRC*ASLGAD
Trigger: GTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACA...ATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHLSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000555630.5
ENST00000557217.5
CDS-3UTR CCA 90 bp AGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGTCAGCAGGCAGTGTTTaGACAGGTGTTGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: SLSEIMYHQGLQSFHCHLSAGSV*TGVGRR
Trigger: GCGACGCCCAACACCTGTCCAAACACTGCCTGCTGA...CAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCAGCAGGCAGTGTTTaGACAGGTGTTGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLSAGSV*TGVGRR
Trigger: GCGACGCCCAACACCTGTCCAAACACTGCCTGCTGA...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR TCA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACAGCTGTTCCATAGCGTaGGAGTTCTTCTTTACTGAG +
Preference number: 4 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNSCSIA*EFFFTE
Trigger: CTCAGTAAAGAAGAACTCTCACGCTATGGAACAGCT...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR GCA 90 bp AGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCTTGCTGTTTCCTACCTaGTCCACCCCTACCAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLVFQRSCIIKVCRVFTVLLFPT*STPTSS
Trigger: TGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAA...GACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGAC +
Preference number: 4 (lower is better)
Translates to: CPAKTISSVILHYLTVLCCLDRC*ASLGAD
Trigger: GTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACA...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACTTTCTCCATCATAAGTaGGACACTCCTGGAAAACAC +
Preference number: 4 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNFLHHK*DTPGKH
Trigger: GTGTTTTCCAGGAGTGTCTCACTTATGATGGAGAAA...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGTCATTAGTTCCGGCTTaGGGGAAGCGCCTTCTTTCA +
Preference number: 4 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLSLVPA*GKRLLS
Trigger: TGAAAGAAGGCGCTTCCCTCAAGCCGGAACTAATGA...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp ATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAGGAGGTATTTATGACTaGCTACCCAGTTCATACTTC +
Preference number: 4 (lower is better)
Translates to: IDHRFLSNHRWCLVFVQQGGIYD*LPSSYF
Trigger: GAAGTATGAACTGGGTAGTCAGTCATAAATACCTCC...TTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR GCA 90 bp CTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCTTTGCTGTGAAAAATTaGTTGCACTTTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LQSFHCHLQQEPLCSRKSFAVKN*LHFAPA
Trigger: GGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAA...GGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp ATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATTTTGCTGTGAAAAATTaGTTGCACTTTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IASSPIIGGVWCLSSKNHFAVKN*LHFAPA
Trigger: GGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAA...ATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR GCA 90 bp GACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTTCCCGAAGGTACCCCTaGCCAGCGACATCATATAAA +
Preference number: 4 (lower is better)
Translates to: DSLVFQRSCIIKVCRVFTSRRYP*PATSYK
Trigger: TTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGA...AGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp CCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTAAGCAGCTTCTGCATTTaGTGTTTCCTACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLCSRKSRSHSNRLEWWLSSFCI*CFLPAP
Trigger: TGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTGCT...TAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp TCTCATAATATAAGACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCTTCTTTCCAGTCCATaGCCGACTTCCGCGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SHNIRQSSLSEIMYHQGLLLSSP*PTSAQQ
Trigger: CTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAG...CAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTATATTATGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000555630.5
ENST00000557217.5
CDS-3UTR CCA 90 bp TCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: SCIIKVCRVFTVICNKSLLSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...GAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp AGAAGGAGCAGAAAACCAATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: RRSRKPICFLTLLGQFLILSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...GATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACTTTCTTGACTCTCCTTaGACAGTTCCTCATCCCTTA +
Preference number: 4 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNFLDSP*TVPHPL
Trigger: TAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAA...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp ATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATTTTCTTGACTCTCCTTaGACAGTTCCTCATCCCTTA +
Preference number: 4 (lower is better)
Translates to: IASSPIIGGVWCLSSKNHFLDSP*TVPHPL
Trigger: TAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAA...ATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTATCAGCAGGCAGTGTTTaGACAGGTGTTGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: VSGVCPAKTISSVILHYLSAGSV*TGVGRR
Trigger: GCGACGCCCAACACCTGTCCAAACACTGCCTGCTGA...TAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATCAGCCCCTGACCTCATaGAGTTTCAGCCTCATAATC +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNQPLTS*SFSLII
Trigger: GATTATGAGGCTGAAACTCCATGAGGTCAGGGGCTG...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553282.1
CDS-3UTR TCA 90 bp CATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTTCTCCATCATAAGTaGGACACTCCTGGAAAACAC +
Preference number: 4 (lower is better)
Translates to: HLQQEPLCSRKSRSHSNRFLHHK*DTPGKH
Trigger: GTGTTTTCCAGGAGTGTCTCACTTATGATGGAGAAA...TCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp TCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTTTCTCCATCATAAGTaGGACACTCCTGGAAAACAC +
Preference number: 4 (lower is better)
Translates to: SSRSAEFSLSFATRASLFFLHHK*DTPGKH
Trigger: GTGTTTTCCAGGAGTGTCTCACTTATGATGGAGAAA...GAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCTTGACATCTTGAAATaGAACAGGATCTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNLDILK*NRILSM
Trigger: CATGGACAAGATCCTGTTTCATTTCAAGATGTCAAG...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATGACAATCAGGCACTTTaGTTTGGACCTTCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNDNQAL*FGPSLS
Trigger: GGACAGAGAAGGTCCAAATCAAAGTGCCTGATTGTC...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR GCA 90 bp TCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTCCCGAAGGTACCCCTaGCCAGCGACATCATATAAA +
Preference number: 4 (lower is better)
Translates to: SSLSEIMYHQGLQSFHCHSRRYP*PATSYK
Trigger: TTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGA...ATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp GAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGAACAATTACTGTCACTaGCGCGGAGAATACCGCTAC +
Preference number: 4 (lower is better)
Translates to: EIMYHQGLQSFHCHLQQENNYCH*RGEYRY
Trigger: GTAGCGGTATTCTCCGCGGCAGTGACAGTAATTGTT...CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557217.5
CDS-3UTR CCA 90 bp GAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EIMYHQGLQSFHCHLQQELSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLLSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp GAGTTTAGCAAAGACTTTTGCTGTGAAAAATTGCTTGCACTTTGCTCCAGCCTTCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: EFSKDFCCEKLLALCSSLLSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...AAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGCTAAACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp CATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTTCTTGACTCTCCTTaGACAGTTCCTCATCCCTTA +
Preference number: 4 (lower is better)
Translates to: HLQQEPLCSRKSRSHSNRFLDSP*TVPHPL
Trigger: TAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAA...TCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp TCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGAAAAGTTTTCGTAATTaGTCATCGCTTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRSAEFSLSFATRASLFSKSFRN*SSLPLQ
Trigger: TTGGAGAGGAAGCGATGATCAATTACGAAAACTTTT...CGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATCAAAGACTTTTGCTGTaGAAAATTGCTTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHQRLLL*KIACTL
Trigger: CAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTG...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATCCATATGAATCTGTATaGAGGAGTTTAGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHPYESV*RSLAKT
Trigger: AGTCTTTGCTAAACTCCTTCATACAGATTCATATGG...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000555630.5
ENST00000555726.5
ENST00000557217.5
CDS-3UTR TCA 90 bp TTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCTTGACATCTTGAAATaGAACAGGATCTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: FTVICNKSLSVLVSPEAILDILK*NRILSM
Trigger: CATGGACAAGATCCTGTTTCATTTCAAGATGTCAAG...AATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR TCA 90 bp ATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATGTTACTGTGTCTCCTTaGTTACTGTTGATTAAATCC +
Preference number: 4 (lower is better)
Translates to: IASSPIIGGVWCLSSKNHVTVSP*LLLIKS
Trigger: GGATTTAATCAACAGTAATCAAGGAGACACAGTAAC...ATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACAAGTCTGGGCAGGTTTaGACAGTTAATAAAACAAAC +
Preference number: 4 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNKSGQV*TVNKTN
Trigger: GTTTGTTTTATTAACTGTTCAAACCTGCCCAGACTT...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR GCA 90 bp CCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTATTTGCTGTGAAAAATTaGTTGCACTTTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLCSRKSRSHSNRLEWWLFAVKN*LHFAPA
Trigger: GGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAA...TAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp GGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTGTATCATCAAGGTCTaGAGAGTTTTCACTGTCATT +
Preference number: 4 (lower is better)
Translates to: GLQSFHCHLQQEPLCSRKCIIKV*RVFTVI
Trigger: AATGACAGTGAAAACTCTGCAGACCTTGATGATACA...CTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR GCA 90 bp GTTCCTCATCCCTTAGCTCCAATAAATCATCTAGGAAGCTGCATGCTAAAATATAGCAGCTTCTGCATTTaGTGTTTCCTACCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VPHPLAPINHLGSCMLKYSSFCI*CFLPAP
Trigger: TGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTGCT...ATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GAGCAGAAAACCAATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCCCTTAATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: EQKTNLFLDSPWTVPHPLIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...TAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTAATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: PLCSRKSRSHSNRLEWWLIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...TAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp TATCAAGATTCAAGTACTGGCCATAAACTCTTAGGGCAGAAGGAGCAGAAAACCATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: YQDSSTGHKLLGQKEQKTIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...GGTTTTCTGCTCCTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CCA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACACAGGATCTTGTCCATaGATTTTCATTAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNTGSCP*IFISSC
Trigger: ACAGGAACTAATGAAAATCCATGGACAAGATCCTGT...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGACAGGATCTTGTCCATaGATTTTCATTAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: EPLCSRKSRSHSNRLEWWTGSCP*IFISSC
Trigger: ACAGGAACTAATGAAAATCCATGGACAAGATCCTGT...CCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR CCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATAATCGATTAGAATGGTaGTTACTGTGTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHNRLEW*LLCLLD
Trigger: ATCAAGGAGACACAGTAACCACCATTCTAATCGATT...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp TCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGAATCGATTAGAATGGTaGTTACTGTGTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: SRSAEFSLSFATRASLFSNRLEW*LLCLLD
Trigger: ATCAAGGAGACACAGTAACCACCATTCTAATCGATT...CGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR CCA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTTGTTTCTCTACTGTTTaGACAGGTGTTGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSCFSTV*TGVGRR
Trigger: GCGACGCCCAACACCTGTCCAAACAGTAGAGAAACA...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553282.1
CDS-3UTR CCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATAAGGTAAATTTTGTTTaGACAGGTGTTGGGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNKVNFV*TGVGRR
Trigger: GCGACGCCCAACACCTGTCCAAACAAAATTTACCTT...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557288.1
3UTR CAA 72 bp ATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: IASSPIIGGVWC*SSKNHKFCNSS
Trigger: TGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp AAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTACCATATGAATCTGTATaGAGGAGTTTAGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: KVCRVFTVICNKSLSVLVPYESV*RSLAKT
Trigger: AGTCTTTGCTAAACTCCTTCATACAGATTCATATGG...TACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp AGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGAGCTGTTCCATAGCGTaGGAGTTCTTCTTTACTGAG +
Preference number: 4 (lower is better)
Translates to: SLSEIMYHQGLQSFHCHLSCSIA*EFFFTE
Trigger: CTCAGTAAAGAAGAACTCTCACGCTATGGAACAGCT...CAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGACTCCTTGATTACTGTTaGTTAAATCCTGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: HLQQEPLCSRKSRSHSNRLLDYC*LNPEER
Trigger: TCTCTCTTCAGGATTTAATCAACAGTAATCAAGGAG...TCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR GCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATAAATTGCTTGCACTTTaGTCCAGCCTTTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNKLLAL*SSLFTN
Trigger: GTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTT...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR GCA 90 bp GAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGAAATTGCTTGCACTTTaGTCCAGCCTTTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: EIMYHQGLQSFHCHLQQEKLLAL*SSLFTN
Trigger: GTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTT...CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp ATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTTTTGCTGTGAAAAATTaGTTGCACTTTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: IMYHQGLQSFHCHLQQEPFAVKN*LHFAPA
Trigger: GGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAA...AGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp GAGTTTAGCAAAGACTTTTGCTGTGAAAAATTGCTTGCACTTTGCTCCAGCCTTTTTGCTGTGAAAAATTaGTTGCACTTTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EFSKDFCCEKLLALCSSLFAVKN*LHFAPA
Trigger: GGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAA...AAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGCTAAACTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR GCA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCTCCCGAAGGTACCCCTaGCCAGCGACATCATATAAA +
Preference number: 4 (lower is better)
Translates to: CPAKTISSVILHYLTVLCSRRYP*PATSYK
Trigger: TTTATATGATGTCGCTGGGCAGGGGTACCTTCGGGA...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR GCA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATGAAGAACTTCCTAACTaGTGTACAAACATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHEELPN*CTNIKG
Trigger: TCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTC...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000555630.5
ENST00000555726.5
ENST00000557217.5
CDS-3UTR GCA 90 bp CACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAGAAGAACTTCCTAACTaGTGTACAAACATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: HCHLQQEPLCSRKSRSHSEELPN*CTNIKG
Trigger: TCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTC...TGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp AAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTATGTATCATCAAGGTCTaGAGAGTTTTCACTGTCATT +
Preference number: 4 (lower is better)
Translates to: KVCRVFTVICNKSLSVLVCIIKV*RVFTVI
Trigger: AATGACAGTGAAAACTCTGCAGACCTTGATGATACA...TACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR CCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp GTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTCTCCAATCATAGGTaGTGTCTGGTGTTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: VVSGVCPAKTISSVILHYLSNHR*CLVFVQ
Trigger: CTGGACAAACACCAGACACCACCTATGATTGGAGAG...ATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp TTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTAATCGATTAGAATGGTaGTTACTGTGTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: FTVICNKSLSVLVSPEAINRLEW*LLCLLD
Trigger: ATCAAGGAGACACAGTAACCACCATTCTAATCGATT...AATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR CCA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCTTCATTGCGGATATCTaGAAGCCTTCCAGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: CPAKTISSVILHYLTVLCFIADI*KPSRSP
Trigger: AGGGGACCTGGAAGGCTTCCAGATATCCGCAATGAA...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATAGAGTTCTTCTTTACTaGGCATGCCATTGTGATCTT +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNRVLLY*ACHCDL
Trigger: AAGATCACAATGGCATGCTCAGTAAAGAAGAACTCT...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR TCA 90 bp CAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCTTGACATCTTGAAATaGAACAGGATCTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: QSSLSEIMYHQGLQSFHCLDILK*NRILSM
Trigger: CATGGACAAGATCCTGTTTCATTTCAAGATGTCAAG...ACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR TCA 90 bp CCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTACTCCTTGATTACTGTTaGTTAAATCCTGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PLCSRKSRSHSNRLEWWLLLDYC*LNPEER
Trigger: TCTCTCTTCAGGATTTAATCAACAGTAATCAAGGAG...TAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR TCA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTAGGAAGGAGGTATTTATaGCTGACTACCCAGTTCATA +
Preference number: 4 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLGRRYL*LTTQFI
Trigger: TATGAACTGGGTAGTCAGTCATAAATACCTCCTTCC...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR GCA 90 bp TCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATAAATTGCTTGCACTTTaGTCCAGCCTTTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: SSLSEIMYHQGLQSFHCHKLLAL*SSLFTN
Trigger: GTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTT...ATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGCTAAATCTTGCACTTTaGTCCAGCCTTTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRLNLAL*SSLFTN
Trigger: GTTGGTGAAAAGGCTGGAGCAAAGTGCAAGATTTAG...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR CCA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp CCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTAAATCGATTAGAATGGTaGTTACTGTGTCTCCTTGAT +
Preference number: 4 (lower is better)
Translates to: PLCSRKSRSHSNRLEWWLNRLEW*LLCLLD
Trigger: ATCAAGGAGACACAGTAACCACCATTCTAATCGATT...TAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR CCA 90 bp GTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTACGAGGGCGGAAGTCTTaGCTAAAGAGGCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: VSGVCPAKTISSVILHYLRGRKS*LKRQKQ
Trigger: TTGTTTTTGCCTCTTTAGCCAAGACTTCCGCCCTCG...TAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000557217.5
CDS-3UTR TCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATAAAAGTTTTCGTAATTaGTCATCGCTTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNKSFRN*SSLPLQ
Trigger: TTGGAGAGGAAGCGATGATCAATTACGAAAACTTTT...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGAAAAGTTTTCGTAATTaGTCATCGCTTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLKSFRN*SSLPLQ
Trigger: TTGGAGAGGAAGCGATGATCAATTACGAAAACTTTT...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp GAGTTTAGCAAAGACTTTTGCTGTGAAAAATTGCTTGCACTTTGCTCCAGCCTTCAAAGACTTTTGCTGTaGAAAATTGCTTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: EFSKDFCCEKLLALCSSLQRLLL*KIACTL
Trigger: CAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTG...AAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGCTAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGCCATATGAATCTGTATaGAGGAGTTTAGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLPYESV*RSLAKT
Trigger: AGTCTTTGCTAAACTCCTTCATACAGATTCATATGG...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp AGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGAGAGTTCTTCTTTACTaGGCATGCCATTGTGATCTT +
Preference number: 4 (lower is better)
Translates to: SLSEIMYHQGLQSFHCHLRVLLY*ACHCDL
Trigger: AAGATCACAATGGCATGCTCAGTAAAGAAGAACTCT...CAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp GAGTTTAGCAAAGACTTTTGCTGTGAAAAATTGCTTGCACTTTGCTCCAGCCTTGTTACTGTGTCTCCTTaGTTACTGTTGATTAAATCC +
Preference number: 4 (lower is better)
Translates to: EFSKDFCCEKLLALCSSLVTVSP*LLLIKS
Trigger: GGATTTAATCAACAGTAATCAAGGAGACACAGTAAC...AAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGCTAAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAAATTGCTTGCACTTTaGTCCAGCCTTTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSKLLAL*SSLFTN
Trigger: GTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTT...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR GCA 90 bp GTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATAAATTGCTTGCACTTTaGTCCAGCCTTTTCACCAAC +
Preference number: 4 (lower is better)
Translates to: VVSGVCPAKTISSVILHYKLLAL*SSLFTN
Trigger: GTTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTT...ATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR GCA 90 bp CCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTAGAAGAACTTCCTAACTaGTGTACAAACATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: PLCSRKSRSHSNRLEWWLEELPN*CTNIKG
Trigger: TCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTC...TAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp AGAAGGAGCAGAAAACCAATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCGAAGAACTTCCTAACTaGTGTACAAACATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: RRSRKPICFLTLLGQFLIEELPN*CTNIKG
Trigger: TCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTC...GATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTCCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR GCA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGTGTATCATCAAGGTCTaGAGAGTTTTCACTGTCATT +
Preference number: 4 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLCIIKV*RVFTVI
Trigger: AATGACAGTGAAAACTCTGCAGACCTTGATGATACA...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTACTTTTCATTGTTCATTaGGGATATCTGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLLFIVH*GYLEAF
Trigger: GAAGGCTTCCAGATATCCGCAATGAACAATGAAAAG...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp AATTGCCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTTTCTTGACTCTCCTTaGACAGTTCCTCATCCCTTA +
Preference number: 4 (lower is better)
Translates to: NCLQKVFVIDHRFLSNHRFLDSP*TVPHPL
Trigger: TAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAA...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGCAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554899.5
CDS-3UTR CCA 90 bp GACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTTCAAATCGATTAGAATaGTGGTTACTGTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DSLVFQRSCIIKVCRVFTSNRLE*WLLCLL
Trigger: AAGGAGACACAGTAACCACCATTCTAATCGATTTGA...AGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR CCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCAAATCGATTAGAATaGTGGTTACTGTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNSNRLE*WLLCLL
Trigger: AAGGAGACACAGTAACCACCATTCTAATCGATTTGA...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGTTATATGCAAATAACTaGCTTCCTAGAACTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLLYANN*LPRTGR
Trigger: CCTTCCAGTTCTAGGAAGCCAGTTATTTGCATATAA...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR CCA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATGCATCACTGGCTAAATaGCTCTCATATTTCCAAATA +
Preference number: 4 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNASLAK*LSYFQI
Trigger: TATTTGGAAATATGAGAGCCATTTAGCCAGTGATGC...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR TCA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGAAAAGTTTTCGTAATTaGTCATCGCTTCCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRKSFRN*SSLPLQ
Trigger: TTGGAGAGGAAGCGATGATCAATTACGAAAACTTTT...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp CTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTCAAAGACTTTTGCTGTaGAAAATTGCTTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: LVFQRSCIIKVCRVFTVIQRLLL*KIACTL
Trigger: CAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTG...AATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGCAAAGACTTTTGCTGTaGAAAATTGCTTGCACTTTG +
Preference number: 4 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRQRLLL*KIACTL
Trigger: CAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTG...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGCCATATGAATCTGTATaGAGGAGTTTAGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRPYESV*RSLAKT
Trigger: AGTCTTTGCTAAACTCCTTCATACAGATTCATATGG...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp GTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTTGACATCTTGAAATaGAACAGGATCTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: VVSGVCPAKTISSVILHYLDILK*NRILSM
Trigger: CATGGACAAGATCCTGTTTCATTTCAAGATGTCAAG...ATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR TCA 90 bp AGAAGCCATTCAAATCGATTAGAATGGTGGTTACTGTGTCTCCTTGATTACTGTCTCCTTGATTACTGTTaGTTAAATCCTGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: RSHSNRLEWWLLCLLDYCLLDYC*LNPEER
Trigger: TCTCTCTTCAGGATTTAATCAACAGTAATCAAGGAG...ACAGTAATCAAGGAGACACAGTAACCACCATTCTAATCGATTTGAATGGCTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR TCA 90 bp AGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCTCCTTGATTACTGTTaGTTAAATCCTGAAGAGAGA +
Preference number: 4 (lower is better)
Translates to: SLSEIMYHQGLQSFHCHLLLDYC*LNPEER
Trigger: TCTCTCTTCAGGATTTAATCAACAGTAATCAAGGAG...CAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR TCA 90 bp GAAACAGGATCTTGTCCATGGATTTTCATTAGTTCCTGTATGGCCCTAAAGAAAGTTACTGTGTCTCCTTaGTTACTGTTGATTAAATCC +
Preference number: 4 (lower is better)
Translates to: ETGSCPWIFISSCMALKKVTVSP*LLLIKS
Trigger: GGATTTAATCAACAGTAATCAAGGAGACACAGTAAC...TTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp AGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCGAAGAACTTCCTAACTaGTGTACAAACATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: SLVFQRSCIIKVCRVFTVEELPN*CTNIKG
Trigger: TCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTC...GACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR GCA 90 bp GTTCCTCATCCCTTAGCTCCAATAAATCATCTAGGAAGCTGCATGCTAAAATATTGTATCATCAAGGTCTaGAGAGTTTTCACTGTCATT +
Preference number: 4 (lower is better)
Translates to: VPHPLAPINHLGSCMLKYCIIKV*RVFTVI
Trigger: AATGACAGTGAAAACTCTGCAGACCTTGATGATACA...ATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAATCATAGGTGGTGTCTaGTGTTTGTCCAGCAAAAAC +
Preference number: 4 (lower is better)
Translates to: VSGVCPAKTISSVILHYLIIGGV*CLSSKN
Trigger: GTTTTTGCTGGACAAACACCAGACACCACCTATGAT...TAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CCA 90 bp CATTGTGATCTTTATCAAGATTCAAGTACTGGCCATAAACTCTTAGGGCAGAAGACAGGATCTTGTCCATaGATTTTCATTAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: HCDLYQDSSTGHKLLGQKTGSCP*IFISSC
Trigger: ACAGGAACTAATGAAAATCCATGGACAAGATCCTGT...CTTCTGCCCTAAGAGTTTATGGCCAGTACTTGAATCTTGATAAAGATCACAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCAAATCGATTAGAATaGTGGTTACTGTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLSNRLE*WLLCLL
Trigger: AAGGAGACACAGTAACCACCATTCTAATCGATTTGA...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GAAATGAAACAGGATCTTGTCCATGGATTTTCATTAGTTCCTGTATGGCCTGTATCAAATCGATTAGAATaGTGGTTACTGTGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: EMKQDLVHGFSLVPVWPVSNRLE*WLLCLL
Trigger: AAGGAGACACAGTAACCACCATTCTAATCGATTTGA...TACAGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTCATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557074.1
CDS-3UTR TCA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTCCATATGAATCTGTATaGAGGAGTTTAGCAAAGACT +
Preference number: 4 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSPYESV*RSLAKT
Trigger: AGTCTTTGCTAAACTCCTTCATACAGATTCATATGG...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR TCA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCAGAGTTCTTCTTTACTaGGCATGCCATTGTGATCTT +
Preference number: 4 (lower is better)
Translates to: CPAKTISSVILHYLTVLCRVLLY*ACHCDL
Trigger: AAGATCACAATGGCATGCTCAGTAAAGAAGAACTCT...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR GCA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGGAAGAACTTCCTAACTaGTGTACAAACATAAAAGGA +
Preference number: 4 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHREELPN*CTNIKG
Trigger: TCCTTTTATGTTTGTACAGCAGTTAGGAAGTTCTTC...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000557217.5
CDS-3UTR GCA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCCTTTTCATTGTTCATTaGGGATATCTGGAAGCCTTC +
Preference number: 4 (lower is better)
Translates to: CPAKTISSVILHYLTVLCLFIVH*GYLEAF
Trigger: GAAGGCTTCCAGATATCCGCAATGAACAATGAAAAG...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CCA 90 bp GTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTATCACACAGCAGGTTATaGTCAGTGCAAGTAAATCAT +
Preference number: 4 (lower is better)
Translates to: VSGVCPAKTISSVILHYLSHSRL*SVQVNH
Trigger: ATGATTTACTTGCACTGACCATAACCTGCTGTGTGA...TAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR CCA 90 bp TCTCATAATATAAGACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGACAGGATCTTGTCCATaGATTTTCATTAGTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SHNIRQSSLSEIMYHQGLTGSCP*IFISSC
Trigger: ACAGGAACTAATGAAAATCCATGGACAAGATCCTGT...CAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTATATTATGAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
3UTR CAA 72 bp ACATTCAGGTATCCTTTGTTCTCAATATCAAGCAGTTaGAAAATATATTGTAGAGCTGCAGGTTCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: TFRYPLFSISSS*KIYCRAAGSFL
Trigger: CAGAAAGGAACCTGCAGCTCTACAATATATTTTCAAACTGCTTGATATTGAGAACAAAGGATACCTGAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS TCA 90 bp CCGCCAGGCCCCGTAAAGGTTAGGAAGGCCGTCCAACCACCATCTTaGTCGAGGGCGGAAGTCTTGGCAAGCCGGATTTTAAAGGCCACG +
Preference number: 5 (lower is better)
Translates to: PPGPVKVRKAVQPPS*SRAEVLASRILKAT
Trigger: CGTGGCCTTTAAAATCCGGCTTGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAACCTTTACGGGGCCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557278.1
CDS GCA 90 bp TTCTTTCCAGTCCATGGCCGACTTCCGCGCAGCAGCTTCTGCATTTaGTGTTTCCTACCTGCTCCACCCCTACCAGCTCAGGCGTCAGCA +
Preference number: 5 (lower is better)
Translates to: FFPVHGRLPRSSFCI*CFLPAPPLPAQASA
Trigger: TGCTGACGCCTGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000555644.5
ENST00000557217.5
ENST00000557278.1
CDS CCA 90 bp TGTTGGGCGTCGCTAGGCGCCGACGAAGAACTTCTTTCCAGTCCATaGCCGACTTCCGCGCAGCAGCTTCTGCATTTGCTGTTTCCTACC +
Preference number: 5 (lower is better)
Translates to: CWASLGADEELLSSP*PTSAQQLLHLLFPT
Trigger: GGTAGGAAACAGCAAATGCAGAAGCTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000555630.5
ENST00000555644.5
ENST00000557217.5
ENST00000557278.1
CDS GCA 90 bp AAGAACTTCTTTCCAGTCCATGGCCGACTTCCGCGCAGCAGCTTCTaGATTTGCTGTTTCCTACCTGCTCCACCCCTACCAGCTCAGGCG +
Preference number: 5 (lower is better)
Translates to: KNFFPVHGRLPRSSF*ICCFLPAPPLPAQA
Trigger: CGCCTGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAGTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000555644.5
ENST00000557217.5
ENST00000557278.1
CDS GCA 90 bp GGGTACATGACCCATGCAAACTCAGCGGCTGCTTCTGGTGGGAACTaGTGCTTCAGAGCCTATGTAGTACCACTCTGTAGTACGGACTCC +
Preference number: 5 (lower is better)
Translates to: GYMTHANSAAASGGN*CFRAYVVPLCSTDS
Trigger: GGAGTCCGTACTACAGAGTGGTACTACATAGGCTCTGAAGCAGCAGTTCCCACCAGAAGCAGCCGCTGAGTTTGCATGGGTCATGTACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556254.1
CDS TCA 90 bp CCGCCAGGCCCCGTAAAGGTTAGGAAGGCCGTCCAACCACCATCTTaGTCGAGGGCGGAAGTCTTGGCTAAAGAGGCAAAAACAATTACT +
Preference number: 5 (lower is better)
Translates to: PPGPVKVRKAVQPPS*SRAEVLAKEAKTIT
Trigger: AGTAATTGTTTTTGCCTCTTTAGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAACCTTTACGGGGCCTGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000555644.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACGTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNVFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAC...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATTTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHLFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAA...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555630.5
CDS-3UTR CAA 90 bp AAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAGTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: KVCRVFTVICNKSLSVLVVFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAC...TACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGCTTTATCGTGTGCCTTaGGCGCGTGCGCACCACGTG +
Preference number: 5 (lower is better)
Translates to: EPLCSRKSRSHSNRLEWWLYRVP*ARAHHV
Trigger: CACGTGGTGCGCACGCGCCAAAGGCACACGATAAAG...CCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS GCA 90 bp TACATGACCCATGCAAACTCAGCGGCTGCTTCTGGTGGGAACTGCTaGTTCAGAGCCTATGTAGTACCACTCTGTAGTACGGACTCCATT +
Preference number: 5 (lower is better)
Translates to: YMTHANSAAASGGNC*FRAYVVPLCSTDSI
Trigger: AATGGAGTCCGTACTACAGAGTGGTACTACATAGGCTCTGAAGCAGCAGTTCCCACCAGAAGCAGCCGCTGAGTTTGCATGGGTCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556254.1
CDS-3UTR CAA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACTTCAGCAGGCAGTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNFSRQC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACACTGCCTGCTGAA...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp AAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTACTTTATCGTGTGCCTTaGGCGCGTGCGCACCACGTG +
Preference number: 5 (lower is better)
Translates to: KVCRVFTVICNKSLSVLVLYRVP*ARAHHV
Trigger: CACGTGGTGCGCACGCGCCAAAGGCACACGATAAAG...TACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS CCA 90 bp TTAGGAAGGCCGTCCAACCACCATCTTGATCGAGGGCGGAAGTCTTaGCTAAAGAGGCAAAAACAATTACTGTCACTGCCGCGGAGAATA +
Preference number: 5 (lower is better)
Translates to: LGRPSNHHLDRGRKS*LKRQKQLLSLPRRI
Trigger: TATTCTCCGCGGCAGTGACAGTAATTGTTTTTGCCTCTTTAGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000555644.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATCGTCCAACCACCATCTaGATCGAGGGCGGAAGTCTT +
Preference number: 5 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHRPTTI*IEGGSL
Trigger: AAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACG...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTGTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: QSSLSEIMYHQGLQSFHCVFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAC...ACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GAGTTTAGCAAAGACTTTTGCTGTGAAAAATTGCTTGCACTTTGCTCCAGCCTTTTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: EFSKDFCCEKLLALCSSLLFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAA...AAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGCAAAAGTCTTTGCTAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000557288.1
CDS-3UTR CAA 90 bp AGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGGTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: SLSEIMYHQGLQSFHCHLVFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAC...CAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGGTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRVFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAC...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GTTCCTCATCCCTTAGCTCCAATAAATCATCTAGGAAGCTGCATGCTAAAATATGTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: VPHPLAPINHLGSCMLKYVFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAC...ATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000555726.5
ENST00000557217.5
CDS-3UTR CAA 90 bp TGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATTTCAGCAGGCAGTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: CHLQQEPLCSRKSRSHSNFSRQC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACACTGCCTGCTGAA...ATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GAGCAGAAAACCAATTTGTTTCTTGACTCTCCTTGGACAGTTCCTCATCCCTTATTCAGCAGGCAGTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: EQKTNLFLDSPWTVPHPLFSRQC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACACTGCCTGCTGAA...TAAGGGATGAGGAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000555630.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: IDHRFLSNHRWCLVFVQQGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...TTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp GAAACAGGATCTTGTCCATGGATTTTCATTAGTTCCTGTATGGCCCTAAAGAAATTCAGCAGGCAGTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: ETGSCPWIFISSCMALKKFSRQC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACACTGCCTGCTGAA...TTTCTTTAGGGCCATACAGGAACTAATGAAAATCCATGGACAAGATCCTGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTTCAGCAGGCAGTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRFSRQC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACACTGCCTGCTGAA...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GTTCCTCATCCCTTAGCTCCAATAAATCATCTAGGAAGCTGCATGCTAAAATATTTCAGCAGGCAGTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: VPHPLAPINHLGSCMLKYFSRQC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACACTGCCTGCTGAA...ATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000555726.5
ENST00000557217.5
CDS-3UTR CAA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCCTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGA +
Preference number: 5 (lower is better)
Translates to: CPAKTISSVILHYLTVLCLFGQV*GVARRR
Trigger: TCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAG...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553282.1
CDS-3UTR CAA 90 bp CATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTCATTAGTTCCGGCTaGAGGGAAGCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: HLQQEPLCSRKSRSHSNRFISSG*REAPSF
Trigger: GAAAGAAGGCGCTTCCCTCAAGCCGGAACTAATGAA...TCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCAAGGTAAATTTTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNQGKFC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACAAAATTTACCTTG...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557288.1
CDS-3UTR CAA 90 bp CTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTCGTCCAACCACCATCTaGATCGAGGGCGGAAGTCTT +
Preference number: 5 (lower is better)
Translates to: LVFQRSCIIKVCRVFTVIRPTTI*IEGGSL
Trigger: AAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACG...AATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATCTGTTTCTCTACTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNLFLYC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACAGTAGAGAAACAG...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553282.1
CDS-3UTR CAA 90 bp CAACAAGAGCCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAAGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: QQEPLCSRKSRSHSNRLEGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...TTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGGCTCTTGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACAAAATTGCTTGCACTTaGCTCCAGCCTTTTCACCAA +
Preference number: 5 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNKIACT*LQPFHQ
Trigger: TTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTT...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp CTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGTAAGTCCAAAATTGCTTGCACTTaGCTCCAGCCTTTTCACCAA +
Preference number: 5 (lower is better)
Translates to: LQSFHCHLQQEPLCSRKSKIACT*LQPFHQ
Trigger: TTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTT...GGACTTACGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAAATTGCTTGCACTTaGCTCCAGCCTTTTCACCAA +
Preference number: 5 (lower is better)
Translates to: IASSPIIGGVWCLSSKNHKIACT*LQPFHQ
Trigger: TTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTT...ATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp TCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCTCGGAGCAGAAAACCAATTaGTTTCTTGACTCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SRSAEFSLSFATRASLFSEQKTN*FLDSPW
Trigger: CCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTC...CGAGAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACGAGCAGAAAACCAATTaGTTTCTTGACTCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: IIASSPIIGGVWCLSSKNEQKTN*FLDSPW
Trigger: CCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTC...GTTTTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAGTTTTCACTGTCATTaGCAACAAGAGCCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: IDHRFLSNHRWCLVFVQQSFHCH*QQEPLC
Trigger: ACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACT...TTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTCGTCCAACCACCATCTaGATCGAGGGCGGAAGTCTT +
Preference number: 5 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSRPTTI*IEGGSL
Trigger: AAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACG...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTATTCAGCAGGCAGTGTTaGGACAGGTGTTGGGCGTCG +
Preference number: 5 (lower is better)
Translates to: VSGVCPAKTISSVILHYLFSRQC*DRCWAS
Trigger: CGACGCCCAACACCTGTCCAAACACTGCCTGCTGAA...TAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTTTCATTAGTTCCGGCTaGAGGGAAGCGCCTTCTTTC +
Preference number: 5 (lower is better)
Translates to: IMYHQGLQSFHCHLQQEPFISSG*REAPSF
Trigger: GAAAGAAGGCGCTTCCCTCAAGCCGGAACTAATGAA...AGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGTCGAGGGCGGAAGTCTaGGCTAAAGAGGCAAAAACA +
Preference number: 5 (lower is better)
Translates to: QRSCIIKVCRVFTVICNKSRAEV*AKEAKT
Trigger: TGTTTTTGCCTCTTTAGCCAAGACTTCCGCCCTCGA...CTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000557217.5
CDS-3UTR CAA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp CAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: QRSCIIKVCRVFTVICNKGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...CTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp TTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAAACCAATTTGTTTCTaGACTCTCCTTGGACAGTTC +
Preference number: 5 (lower is better)
Translates to: LIIASSPIIGGVWCLSSKKPICF*TLLGQF
Trigger: GAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTT...TTTGCTGGACAAACACCAGACACCACCTATGATTGGAGAGGAAGCGATGATCAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp AGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCCGGTCTAAGAAGACATaGGTCATGGTAGCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: SLVFQRSCIIKVCRVFTVRSKKT*VMVAVP
Trigger: TGGAACAGCTACCATGACCAATGTCTTCTTAGACCG...GACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CCAATATGTAGTTTTCTAAATCAGATTCCCGAAGGTACCCCTGCCCAGCGACATTCTTTTCATTGTTCATaGCGGATATCTGGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: PICSFLNQIPEGTPAQRHSFHCS*RISGSL
Trigger: AAGGCTTCCAGATATCCGCAATGAACAATGAAAAGA...ATGTCGCTGGGCAGGGGTACCTTCGGGAATCTGATTTAGAAAACTACATATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGTGGTGTCTGGGACAATCAGGCACTTaGATTTGGACCTTCTCTGTC +
Preference number: 5 (lower is better)
Translates to: QKVFVIDHRFLSNHRWCLGQSGT*IWTFSV
Trigger: GACAGAGAAGGTCCAAATCAAAGTGCCTGATTGTCC...CAGACACCACCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR CAA 90 bp ATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTGCTGTGAAAAATTGCTaGCACTTTGCTCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: IMYHQGLQSFHCHLQQEPAVKNC*HFAPAF
Trigger: AAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGC...AGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATGCTGTGAAAAATTGCTaGCACTTTGCTCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNAVKNC*HFAPAF
Trigger: AAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGC...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp TCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCGAGCAGAAAACCAATTaGTTTCTTGACTCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: SCIIKVCRVFTVICNKSLEQKTN*FLDSPW
Trigger: CCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTC...GAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp TCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCGTAGAAAGACAGCTCTaGATTCCTCTCTTAATTTCT +
Preference number: 5 (lower is better)
Translates to: SSRSAEFSLSFATRASLFVERQL*IPLLIS
Trigger: AGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTAC...GAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGAAAATTGCTTGCACTTaGCTCCAGCCTTTTCACCAA +
Preference number: 5 (lower is better)
Translates to: EIMYHQGLQSFHCHLQQEKIACT*LQPFHQ
Trigger: TTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTT...CTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATGAGCAGAAAACCAATTaGTTTCTTGACTCTCCTTGG +
Preference number: 5 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNEQKTN*FLDSPW
Trigger: CCAAGGAGAGTCAAGAAACAAATTGGTTTTCTGCTC...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp TCATCAAGGTCTGCAGAGTTTTCACTGTCATTTGCAACAAGAGCCTCTCTGTTCACATTCAGGTATCCTTaGTTCTCAATATCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: SSRSAEFSLSFATRASLFTFRYP*FSISSS
Trigger: ACTGCTTGATATTGAGAACAAAGGATACCTGAATGT...GAACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACTCTGCAGACCTTGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557074.1
ENST00000557217.5
CDS-3UTR CAA 90 bp CCTCTCTGTTCTCGTAAGTCCAGAAGCCATTCAAATCGATTAGAATGGTGGTTATCTTTTCATTGTTCATaGCGGATATCTGGAAGCCTT +
Preference number: 5 (lower is better)
Translates to: PLCSRKSRSHSNRLEWWLSFHCS*RISGSL
Trigger: AAGGCTTCCAGATATCCGCAATGAACAATGAAAAGA...TAACCACCATTCTAATCGATTTGAATGGCTTCTGGACTTACGAGAACAGAGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCGGTGGTGTCTGGTGTTaGTCCAGCAAAAACCATAAG +
Preference number: 5 (lower is better)
Translates to: CPAKTISSVILHYLTVLCGGVWC*SSKNHK
Trigger: CTTATGGTTTTTGCTGGACAAACACCAGACACCACC...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp CCAATCATAGGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATAAACCAATTTGTTTCTaGACTCTCCTTGGACAGTTC +
Preference number: 5 (lower is better)
Translates to: PIIGGVWCLSSKNHKFCNKPICF*TLLGQF
Trigger: GAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTT...ATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACCTATGATTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTACGGTCTAAGAAGACATaGGTCATGGTAGCTGTTCCA +
Preference number: 5 (lower is better)
Translates to: VSGVCPAKTISSVILHYLRSKKT*VMVAVP
Trigger: TGGAACAGCTACCATGACCAATGTCTTCTTAGACCG...TAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTAAGTTTTCACTGTCATTaGCAACAAGAGCCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLSFHCH*QQEPLC
Trigger: ACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACT...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGAGTTTTCACTGTCATTaGCAACAAGAGCCTCTCTGT +
Preference number: 5 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRSFHCH*QQEPLC
Trigger: ACAGAGAGGCTCTTGTTGCAAATGACAGTGAAAACT...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAAAATTGCTTGCACTTaGCTCCAGCCTTTTCACCAA +
Preference number: 5 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSKIACT*LQPFHQ
Trigger: TTGGTGAAAAGGCTGGAGCAAAGTGCAAGCAATTTT...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp GTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAGCTGTGAAAAATTGCTaGCACTTTGCTCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: VSGVCPAKTISSVILHYLAVKNC*HFAPAF
Trigger: AAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGC...TAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp TCTCATAATATAAGACAGTCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGGCTGTGAAAAATTGCTaGCACTTTGCTCCAGCCTTT +
Preference number: 5 (lower is better)
Translates to: SHNIRQSSLSEIMYHQGLAVKNC*HFAPAF
Trigger: AAAGGCTGGAGCAAAGTGCAAGCAATTTTTCACAGC...CAGACCTTGATGATACATGATCTCTGAAAGACTAGACTGTCTTATATTATGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp TCTAGTCTTTCAGAGATCATGTATCATCAAGGTCTGCAGAGTTTTCACTGTCATAAACCAATTTGTTTCTaGACTCTCCTTGGACAGTTC +
Preference number: 5 (lower is better)
Translates to: SSLSEIMYHQGLQSFHCHKPICF*TLLGQF
Trigger: GAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTT...ATGACAGTGAAAACTCTGCAGACCTTGATGATACATGATCTCTGAAAGACTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATTCTAAATCTTGCACTTaGCTCCAGCCTTTTCACCAA +
Preference number: 5 (lower is better)
Translates to: VVSGVCPAKTISSVILHYSKSCT*LQPFHQ
Trigger: TTGGTGAAAAGGCTGGAGCAAAGTGCAAGATTTAGA...ATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554265.5
CDS-3UTR CAA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTAGTAGAAAGACAGCTCTaGATTCCTCTCTTAATTTCT +
Preference number: 5 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLVERQL*IPLLIS
Trigger: AGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTAC...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000553273.5
ENST00000553282.1
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp ACCAACCTTCAAAAAGTTTTCGTAATTGATCATCGCTTCCTCTCCAATCATAGGGTAGAAAGACAGCTCTaGATTCCTCTCTTAATTTCT +
Preference number: 5 (lower is better)
Translates to: TNLQKVFVIDHRFLSNHRVERQL*IPLLIS
Trigger: AGAAATTAAGAGAGGAATCAAGAGCTGTCTTTCTAC...CCTATGATTGGAGAGGAAGCGATGATCAATTACGAAAACTTTTTGAAGGTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000557217.5
ENST00000557288.1
CDS-3UTR CAA 90 bp GTTCCTCATCCCTTAGCTCCAATAAATCATCTAGGAAGCTGCATGCTAAAATATACATTCAGGTATCCTTaGTTCTCAATATCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: VPHPLAPINHLGSCMLKYTFRYP*FSISSS
Trigger: ACTGCTTGATATTGAGAACAAAGGATACCTGAATGT...ATATTTTAGCATGCAGCTTCCTAGATGATTTATTGGAGCTAAGGGATGAGGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GGTGGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTAACATTCAGGTATCCTTaGTTCTCAATATCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: GGVWCLSSKNHKFCNSSLTFRYP*FSISSS
Trigger: ACTGCTTGATATTGAGAACAAAGGATACCTGAATGT...TAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS-3UTR CAA 90 bp TGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTAACAGTTCTCTGCAAACCAATTTGTTTCTaGACTCTCCTTGGACAGTTC +
Preference number: 5 (lower is better)
Translates to: CPAKTISSVILHYLTVLCKPICF*TLLGQF
Trigger: GAACTGTCCAAGGAGAGTCAAGAAACAAATTGGTTT...GCAGAGAACTGTTAGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554899.5
ENST00000557217.5
CDS-3UTR CAA 90 bp GGTGTCTGGTGTTTGTCCAGCAAAAACCATAAGTTCTGTAATTCTTCATTATCTACATTCAGGTATCCTTaGTTCTCAATATCAAGCAGT +
Preference number: 5 (lower is better)
Translates to: GVWCLSSKNHKFCNSSLSTFRYP*FSISSS
Trigger: ACTGCTTGATATTGAGAACAAAGGATACCTGAATGT...AGATAATGAAGAATTACAGAACTTATGGTTTTTGCTGGACAAACACCAGACACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557217.5
CDS GCA 72 bp GTCCATGGCCGACTTCCGCGCAGCAGCTTCTGCATTTaGTGTTTCCTACCTGCTCCACCCCTACCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: VHGRLPRSSFCI*CFLPAPPLPAQ
Trigger: CTGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTGCTGCGCGGAAGTCGGCCATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000555644.5
ENST00000557217.5
ENST00000557278.1
CDS CAA 90 bp CTTCTTTCCAGTCCATGGCCGACTTCCGCGCAGCAGCTTCTGCATTaGCTGTTTCCTACCTGCTCCACCCCTACCAGCTCAGGCGTCAGC +
Preference number: 6 (lower is better)
Translates to: LLSSPWPTSAQQLLH*LFPTCSTPTSSGVS
Trigger: GCTGACGCCTGAGCTGGTAGGGGTGGAGCAGGTAGGAAACAGCAAATGCAGAAGCTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000555644.5
ENST00000557217.5
ENST00000557278.1
CDS CCA 72 bp TCGCTAGGCGCCGACGAAGAACTTCTTTCCAGTCCATaGCCGACTTCCGCGCAGCAGCTTCTGCATTTGCTG +
Preference number: 6 (lower is better)
Translates to: SLGADEELLSSP*PTSAQQLLHLL
Trigger: CAGCAAATGCAGAAGCTGCTGCGCGGAAGTCGGCCATGGACTGGAAAGAAGTTCTTCGTCGGCGCCTAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000555630.5
ENST00000555644.5
ENST00000557217.5
ENST00000557278.1
CDS CCA 72 bp GACTTCATCTTCAGCAGGCAGTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGACGAAGAACTTCTTTCC +
Preference number: 6 (lower is better)
Translates to: DFIFSRQCLDRC*ASLGADEELLS
Trigger: GGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACACTGCCTGCTGAAGATGAAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS CCA 72 bp GGGGTACATGACCCATGCAAACTCAGCGGCTGCTTCTaGTGGGAACTGCTGCTTCAGAGCCTATGTAGTACC +
Preference number: 6 (lower is better)
Translates to: GVHDPCKLSGCF*WELLLQSLCST
Trigger: GGTACTACATAGGCTCTGAAGCAGCAGTTCCCACCAGAAGCAGCCGCTGAGTTTGCATGGGTCATGTACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556254.1
CDS TCA 72 bp CCCGTAAAGGTTAGGAAGGCCGTCCAACCACCATCTTaGTCGAGGGCGGAAGTCTTGGCAAGCCGGATTTTA +
Preference number: 6 (lower is better)
Translates to: PVKVRKAVQPPS*SRAEVLASRIL
Trigger: TAAAATCCGGCTTGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAACCTTTACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000557278.1
CDS CAA 72 bp AGACTTCATCTTCAGCAGGCAGTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGACGAAGAACTTCTTTC +
Preference number: 6 (lower is better)
Translates to: RLHLQQAVFGQV*GVARRRRRTSF
Trigger: GAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACACTGCCTGCTGAAGATGAAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000553273.5
ENST00000554222.5
ENST00000554265.5
ENST00000554488.5
ENST00000554899.5
ENST00000557217.5
CDS TCA 72 bp CCCGTAAAGGTTAGGAAGGCCGTCCAACCACCATCTTaGTCGAGGGCGGAAGTCTTGGCTAAAGAGGCAAAA +
Preference number: 6 (lower is better)
Translates to: PVKVRKAVQPPS*SRAEVLAKEAK
Trigger: TTTTGCCTCTTTAGCCAAGACTTCCGCCCTCGATCAAGATGGTGGTTGGACGGCCTTCCTAACCTTTACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555644.5
ENST00000557217.5
CDS GCA 72 bp ATGTTTGGGGTACATGACCCATGCAAACTCAGCGGCTaGTTCTGGTGGGAACTGCTGCTTCAGAGCCTATGT +
Preference number: 6 (lower is better)
Translates to: MFGVHDPCKLSG*FWWELLLQSLC
Trigger: ACATAGGCTCTGAAGCAGCAGTTCCCACCAGAAGCAGCCGCTGAGTTTGCATGGGTCATGTACCCCAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556254.1
CDS CAA 90 bp TTGGCGCGTGCGCACCACGTGACCCAGGAGTTCATTAGTTCCGGCTaGAGGGAAGCGCCTTCTTTCACAATTTCTTTTCATTGTTCATTG +
Preference number: 6 (lower is better)
Translates to: LARAHHVTQEFISSG*REAPSFTISFHCSL
Trigger: CAATGAACAATGAAAAGAAATTGTGAAAGAAGGCGCTTCCCTCAAGCCGGAACTAATGAACTCCTGGGTCACGTGGTGCGCACGCGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554222.5
ENST00000557217.5
ENST00000557278.1
CDS CAA 72 bp CTCATAATCACTGTTTCTCTACTGTTTGGACAGGTGTaGGGCGTCGCTAGGCGCCGACGAAGAACTTCTTTC +
Preference number: 6 (lower is better)
Translates to: LIITVSLLFGQV*GVARRRRRTSF
Trigger: GAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAGTAGAGAAACAGTGATTATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553282.1
CDS CAA 72 bp GCGCACCACGTGACCCAGGAGTTCATTAGTTCCGGCTaGAGGGAAGCGCCTTCTTTCACAATTTCTTTTCAT +
Preference number: 6 (lower is better)
Translates to: AHHVTQEFISSG*REAPSFTISFH
Trigger: ATGAAAAGAAATTGTGAAAGAAGGCGCTTCCCTCAAGCCGGAACTAATGAACTCCTGGGTCACGTGGTGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000554222.5
ENST00000557217.5
ENST00000557278.1
CDS CCA 72 bp CTGAAAATACAAGGTAAATTTTGTTTGGACAGGTGTTaGGCGTCGCTAGGCGCCGACGAAGAACTTCTTTCC +
Preference number: 6 (lower is better)
Translates to: LKIQGKFCLDRC*ASLGADEELLS
Trigger: GGAAAGAAGTTCTTCGTCGGCGCCTAGCGACGCCCAACACCTGTCCAAACAAAATTTACCTTGTATTTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557288.1
CDS TCA 72 bp TCATTAGTTCCTGTATGGCCATTTCTCCATCATAAGTaGGACACTCCTGGAAAACACGGTCTAAGAAGACAT +
Preference number: 6 (lower is better)
Translates to: SLVPVWPFLHHK*DTPGKHGLRRH
Trigger: ATGTCTTCTTAGACCGTGTTTTCCAGGAGTGTCTCACTTATGATGGAGAAATGGCCATACAGGAACTAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555219.1