RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PPP2R2A (Homo sapiens)

Ensembl gene IDs: ENSG00000221914

Ensembl transcript IDs: ENST00000315985.7, ENST00000380737.8, ENST00000517754.1, ENST00000518208.1, ENST00000518215.5, ENST00000518254.5, ENST00000518397.5, ENST00000518890.5, ENST00000519636.5, ENST00000520329.5, ENST00000521557.5, ENST00000522482.5, ENST00000522535.5, ENST00000524099.5, ENST00000524169.5, ENST00000657943.1, ENST00000660435.1, ENST00000665751.1, ENST00000665949.1, ENST00000666129.1, ENST00000667651.1

Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGTGCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGCAACTAAGCAGGAAGTaGGTTCTTCTGCTAGGAATG +
Preference number: 2 (lower is better)
Translates to: SALPLPKWLADMENTTVMQLSRK*VLLLGM
Trigger: CATTCCTAGCAGAAGAACCCACTTCCTGCTTAGTTG...CATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR-3UTR CCA 90 bp CCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATCCACAGCAACTAAGCAGGAAGTaGGTTCTTCTGCTAGGAATG +
Preference number: 2 (lower is better)
Translates to: PLPKWLADMENTTVMNPQQLSRK*VLLLGM
Trigger: CATTCCTAGCAGAAGAACCCACTTCCTGCTTAGTTG...CTGTGGATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR-3UTR CCA 90 bp GCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATCAATGTGTTGTCGAATaGCACACTGTCAAACACTGG +
Preference number: 2 (lower is better)
Translates to: ALPLPKWLADMENTTVMNQCVVE*HTVKHW
Trigger: CCAGTGTTTGACAGTGTGCCATTCGACAACACATTG...ATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR CAA 90 bp AGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTaGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAAT +
Preference number: 2 (lower is better)
Translates to: SDESTELSPCSYNNV*SNGTLSNTGKGRHN
Trigger: ATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR-3UTR CCA 90 bp AAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCAACCAACTAAGCAGGAAGTaGGTTCTTCTGCTAGGAATG +
Preference number: 2 (lower is better)
Translates to: KGRHNGPLSFIGTNARFNQLSRK*VLLLGM
Trigger: CATTCCTAGCAGAAGAACCCACTTCCTGCTTAGTTG...GTTGAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR-3UTR CCA 90 bp AACACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTCACACTGTCAAACACTaGAAAGGGGCGCCACAATGG +
Preference number: 2 (lower is better)
Translates to: NTTVMNPQSFLHVAITMCHTVKH*KGAPQW
Trigger: CCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTG...ACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR-3UTR CCA 90 bp CGTCATCACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCCAACTAAGCAGGAAGTaGGTTCTTCTGCTAGGAATG +
Preference number: 2 (lower is better)
Translates to: RHHNGRHKKWSKSMLIQSQLSRK*VLLLGM
Trigger: CATTCCTAGCAGAAGAACCCACTTCCTGCTTAGTTG...GGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTGATGACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR-3UTR CCA 90 bp ACAAGACATAATATTTGTAGTAGAGGGAATCACGGTCGGCTCGTTGAATTCTTTCTACCCTTACCTAAATaGCTAGCAGACATGGAGAAC +
Preference number: 2 (lower is better)
Translates to: TRHNICSRGNHGRLVEFFLPLPK*LADMEN
Trigger: GTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAG...AAAGAATTCAACGAGCCGACCGTGATTCCCTCTACTACAAATATTATGTCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380737.8
3UTR-3UTR CCA 90 bp CGTCATCACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCCTACCCTTACCTAAATaGCTAGCAGACATGGAGAAC +
Preference number: 2 (lower is better)
Translates to: RHHNGRHKKWSKSMLIQSLPLPK*LADMEN
Trigger: GTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAG...GGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTGATGACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR TCA 72 bp ACTGTCCAGTCACAACACAGGAAGAATATCACTGTTTaGCACTTGTGGCAGGGGAATATCCCACTTGCAAGT +
Preference number: 3 (lower is better)
Translates to: TVQSQHRKNITV*HLWQGNIPLAS
Trigger: ACTTGCAAGTGGGATATTCCCCTGCCACAAGTGTCAAACAGTGATATTCTTCCTGTGTTGTGACTGGACAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380737.8
3UTR-3UTR CAA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGGCTGGTGGCGTTAACTaGGGTCATTTGGTTAAGACA +
Preference number: 3 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKAGGVN*GHLVKT
Trigger: TGTCTTAACCAAATGACCCAAGTTAACGCCACCAGC...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
3UTR-3UTR CAA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGATATCTGCTCAGCTCTaGTGTTGTGAGGCACTTTAT +
Preference number: 3 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKISAQL*CCEALY
Trigger: ATAAAGTGCCTCACAACACAAGAGCTGAGCAGATAT...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520329.5
3UTR-3UTR CAA 90 bp AGCACTCTTCATCTTTGGATAATGTATCACCGCTTAGGGAAAATGTATTCATATAGCTATAACAATGTGTaGTCGAATGGCACACTGTCA +
Preference number: 3 (lower is better)
Translates to: STLHLWIMYHRLGKMYSYSYNNV*SNGTLS
Trigger: TGACAGTGTGCCATTCGACAACACATTGTTATAGCT...ATATGAATACATTTTCCCTAAGCGGTGATACATTATCCAAAGATGAAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380737.8
3UTR TCA 72 bp AAGTCCATTTCTTCTCCATTAAAGTTTCTGCAAGACTaGCAAAGGTACATTCTACCTATTAAAAATAGGAGC +
Preference number: 3 (lower is better)
Translates to: KSISSPLKFLQD*QRYILPIKNRS
Trigger: GCTCCTATTTTTAATAGGTAGAATGTACCTTTGTCAGTCTTGCAGAAACTTTAATGGAGAAGAAATGGACTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp CTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGCCTCCTCCAGCTCCGTaGCCACTTGCCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: LSNTGKGRHNGPLSFIGTPPPAP*PLASRE
Trigger: CTCCCGGGAGGCAAGTGGTCACGGAGCTGGAGGAGG...CGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665949.1
CDS-3UTR GCA 90 bp AGTGCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGGGGCTTCCCCGCTCGTaGTCTTTCTCCGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: SALPLPKWLADMENTTVMGLPRS*SFSGSG
Trigger: GCCGCTGCCGGAGAAAGAGCACGAGCGGGGAAGCCC...CATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CCA 90 bp GGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCGGTAGAGAGGGCGGATaGCGGCGGATGGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: GKGRHNGPLSFIGTNARFGREGG*RRMAPA
Trigger: CGCAGGTGCCATCCGCCGCCATCCGCCCTCTCTACC...GAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CCA 90 bp GTGGCGTTAACTTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCACTGGTAGAGAGGGCGGATaGCGGCGGATGGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: VALTWVIWLRQCLPGFSTGREGG*RRMAPA
Trigger: CGCAGGTGCCATCCGCCGCCATCCGCCCTCTCTACC...AGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAAGTTAACGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR GCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGGGGCTTCCCCGCTCGTaGTCTTTCTCCGGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKGLPRS*SFSGSG
Trigger: GCCGCTGCCGGAGAAAGAGCACGAGCGGGGAAGCCC...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520329.5
CDS-3UTR CCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCACACTGTCAAACACTaGAAAGGGGCGCCACAATGG +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPHTVKH*KGAPQW
Trigger: CCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTG...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGGGTAGAGAGGGCGGATaGCGGCGGATGGCACCTGCG +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKGREGG*RRMAPA
Trigger: CGCAGGTGCCATCCGCCGCCATCCGCCCTCTCTACC...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518397.5
ENST00000520329.5
CDS-3UTR GCA 90 bp GGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCCAGCTCCTGCCATGTTaGGCTGCAAATGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: GKGRHNGPLSFIGTNARFQLLPC*AANGDP
Trigger: AGGGTCACCATTTGCAGCGCAACATGGCAGGAGCTG...GAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp ACTCGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCTTGCGCTGCAAATGGTaGCCCTGCTGGGTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: TRSVVTVVGSLYLPSSSFLRCKW*PCWVPR
Trigger: CCGAGGAACCCAGCAGGGTCACCATTTGCAGCGCAA...GAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR TCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGTTGCGCTGCAAATGGTaGCCCTGCTGGGTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKLRCKW*PCWVPR
Trigger: CCGAGGAACCCAGCAGGGTCACCATTTGCAGCGCAA...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518397.5
ENST00000520329.5
CDS-3UTR TCA 90 bp CTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGCGCTCCTGCTCCTGTTaGAAGATGACAACTCTACCA +
Preference number: 4 (lower is better)
Translates to: LSNTGKGRHNGPLSFIGTRSCSC*KMTTLP
Trigger: TGGTAGAGTTGTCATCTTTCAACAGGAGCAGGAGCG...CGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTGTTTGTAAAGCACTTTaGGATCCTCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPVCKAL*DPQVKG
Trigger: GCCTTTGACCTGAGGATCTCAAAGTGCTTTACAAAC...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp AGTGCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGCTTTCGCTTGCCACTTaGACAGACTTTGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SALPLPKWLADMENTTVMLSLAT*TDFARL
Trigger: AAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAG...CATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTGGGGAATATCCCACTTaGAAGTCAAGCGTGAAGAAT +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPGEYPT*KSSVKN
Trigger: ATTCTTCACGCTTGACTTGCAAGTGGGATATTCCCC...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCAACTAAGCAGGAAGTaGGTTCTTCTGCTAGGAATG +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPQLSRK*VLLLGM
Trigger: CATTCCTAGCAGAAGAACCCACTTCCTGCTTAGTTG...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp GCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATCACACTGTCAAACACTaGAAAGGGGCGCCACAATGG +
Preference number: 4 (lower is better)
Translates to: ALPLPKWLADMENTTVMNHTVKH*KGAPQW
Trigger: CCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTG...ATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATCCACAGCACACTGTCAAACACTaGAAAGGGGCGCCACAATGG +
Preference number: 4 (lower is better)
Translates to: PLPKWLADMENTTVMNPQHTVKH*KGAPQW
Trigger: CCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTG...CTGTGGATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTACCCTTACCTAAATaGCTAGCAGACATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPLPLPK*LADMEN
Trigger: GTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAG...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTAACAGAGTTTACTTCTaGGGTATTCATGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPNRVYF*GIHAPG
Trigger: ACCAGGTGCATGAATACCTCAGAAGTAAACTCTGTT...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp ATCAATGTTGATACAGTCCAATCTAGTCCATTAGGCAAGATGGTGCAAGAAGTCTTGCGCTGCAAATGGTaGCCCTGCTGGGTTCCTCGG +
Preference number: 4 (lower is better)
Translates to: INVDTVQSSPLGKMVQEVLRCKW*PCWVPR
Trigger: CCGAGGAACCCAGCAGGGTCACCATTTGCAGCGCAA...GACTTCTTGCACCATCTTGCCTAATGGACTAGATTGGACTGTATCAACATTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR GCA 90 bp ACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGACTTTCGCTTGCCACTTaGACAGACTTTGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TGKGRHNGPLSFIGTNARLSLAT*TDFARL
Trigger: AAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAG...TCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp ATAGCTGGTGGCGTTAACTTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCAGCTCCTGCCATGTTaGGCTGCAAATGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: IAGGVNLGHLVKTMFARLQLLPC*AANGDP
Trigger: AGGGTCACCATTTGCAGCGCAACATGGCAGGAGCTG...AAGCCTGGCAAACATTGTCTTAACCAAATGACCCAAGTTAACGCCACCAGCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR CCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTGAGAGCTGTTTGGTaGTGTTATCTCAAGACATAC +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPLRAVW*CYLKTY
Trigger: GTATGTCTTGAGATAACACCACCAAACAGCTCTCAG...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTTTCTCCTGCTCCTGTTaGAAGATGACAACTCTACCA +
Preference number: 4 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFFSCSC*KMTTLP
Trigger: TGGTAGAGTTGTCATCTTTCAACAGGAGCAGGAGAA...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000315985.7
ENST00000380737.8
CDS-3UTR TCA 90 bp AGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACACCCTCCTCCAGCTCATaGAAGGCCTTGCACTCTTCG +
Preference number: 4 (lower is better)
Translates to: SFLHVAITMCCRMAHCQTPSSSS*KALHSS
Trigger: CGAAGAGTGCAAGGCCTTTCATGAGCTGGAGGAGGG...TGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGCTACATGGAGAAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000660435.1
CDS-3UTR GCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTGTTTGGATGAAATTCTaGTGCTGTAATCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPVWMKF*CCNHLC
Trigger: ACAGAGGTGATTACAGCAGCAGAATTTCATCCAAAC...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGCAGCTCCTGCCATGTTaGGCTGCAAATGGTGACCCT +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKQLLPC*AANGDP
Trigger: AGGGTCACCATTTGCAGCGCAACATGGCAGGAGCTG...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518397.5
ENST00000520329.5
CDS-3UTR CCA 90 bp ATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAAGGTATTCATGCACCTaGTATGTTTCCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: ITMCCRMAHCQTLERGATRYSCT*YVSTGL
Trigger: CAGGCCTGTGGAAACATACCAGGTGCATGAATACCT...TGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATCCACAGAGGTATTCATGCACCTaGTATGTTTCCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: PLPKWLADMENTTVMNPQRYSCT*YVSTGL
Trigger: CAGGCCTGTGGAAACATACCAGGTGCATGAATACCT...CTGTGGATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp GCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCCAACTAAGCAGGAAGTaGGTTCTTCTGCTAGGAATG +
Preference number: 4 (lower is better)
Translates to: AITMCCRMAHCQTLERGAQLSRK*VLLLGM
Trigger: CATTCCTAGCAGAAGAACCCACTTCCTGCTTAGTTG...GGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTCAACTAAGCAGGAAGTaGGTTCTTCTGCTAGGAATG +
Preference number: 4 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFQLSRK*VLLLGM
Trigger: CATTCCTAGCAGAAGAACCCACTTCCTGCTTAGTTG...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGCAATGTGTTGTCGAATaGCACACTGTCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: LSNTGKGRHNGPLSFIGTQCVVE*HTVKHW
Trigger: CCAGTGTTTGACAGTGTGCCATTCGACAACACATTG...CGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp GCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCCAATGTGTTGTCGAATaGCACACTGTCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: AITMCCRMAHCQTLERGAQCVVE*HTVKHW
Trigger: CCAGTGTTTGACAGTGTGCCATTCGACAACACATTG...GGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp GCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCAAGAATATCACTGTTTaGCACTTGTGGCAGGGGAAT +
Preference number: 4 (lower is better)
Translates to: AITMCCRMAHCQTLERGAKNITV*HLWQGN
Trigger: ATTCCCCTGCCACAAGTGTCAAACAGTGATATTCTT...GGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp GCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATGTTTGTAAAGCACTTTaGGATCCTCAGGTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: ALPLPKWLADMENTTVMNVCKAL*DPQVKG
Trigger: GCCTTTGACCTGAGGATCTCAAAGTGCTTTACAAAC...ATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTCTTCTGAGGTATTCATaGACCTGGTATGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFLLRYS*TWYVST
Trigger: TGTGGAAACATACCAGGTGCATGAATACCTCAGAAG...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp AGTGCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGCTTCTGAGGTATTCATaGACCTGGTATGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: SALPLPKWLADMENTTVMLLRYS*TWYVST
Trigger: TGTGGAAACATACCAGGTGCATGAATACCTCAGAAG...CATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp GCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATCATCTTTCTTTCGCTTaGCACTTGCACAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: ALPLPKWLADMENTTVMNHLSFA*HLHRLC
Trigger: GCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATG...ATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGATATTCTTCGTGGACTaGCCTCAACCATTAGATCCA +
Preference number: 4 (lower is better)
Translates to: LSNTGKGRHNGPLSFIGTIFFVD*PQPLDP
Trigger: TGGATCTAATGGTTGAGGCCAGTCCACGAAGAATAT...CGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp AGTGCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGATATTCTTCGTGGACTaGCCTCAACCATTAGATCCA +
Preference number: 4 (lower is better)
Translates to: SALPLPKWLADMENTTVMIFFVD*PQPLDP
Trigger: TGGATCTAATGGTTGAGGCCAGTCCACGAAGAATAT...CATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp GGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCCTACCCTTACCTAAATaGCTAGCAGACATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: GKGRHNGPLSFIGTNARFLPLPK*LADMEN
Trigger: GTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAG...GAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATCCACAGCTACCCTTACCTAAATaGCTAGCAGACATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: PLPKWLADMENTTVMNPQLPLPK*LADMEN
Trigger: GTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAG...CTGTGGATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp GCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATAACAGAGTTTACTTCTaGGGTATTCATGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: ALPLPKWLADMENTTVMNNRVYF*GIHAPG
Trigger: ACCAGGTGCATGAATACCTCAGAAGTAAACTCTGTT...ATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp ATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAAACAGAGTTTACTTCTaGGGTATTCATGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: ITMCCRMAHCQTLERGATNRVYF*GIHAPG
Trigger: ACCAGGTGCATGAATACCTCAGAAGTAAACTCTGTT...TGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp GTGGCGTTAACTTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCACTTCTGTTCTTTGGAAGTaGGTCACTAAATCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: VALTWVIWLRQCLPGFSTSVLWK*VTKSSL
Trigger: CAGGCTGGATTTAGTGACTCACTTCCAAAGAACAGA...AGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAAGTTAACGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR GCA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTAATTATATCTGCTTCTaGTACATCATCATCTACTGC +
Preference number: 4 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPNYICF*YIIIYC
Trigger: GCAGTAGATGATGATGTAGCAGAAGCAGATATAATT...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTGTTTGGATGAAATTCTaGTGCTGTAATCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFVWMKF*CCNHLC
Trigger: ACAGAGGTGATTACAGCAGCAGAATTTCATCCAAAC...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp ATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATATTCTTCGTGGACTaGCCTCAACCATTAGATCCA +
Preference number: 4 (lower is better)
Translates to: ITMCCRMAHCQTLERGATIFFVD*PQPLDP
Trigger: TGGATCTAATGGTTGAGGCCAGTCCACGAAGAATAT...TGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR CAA 72 bp TCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTaGTCGAATGGCACACTGTCAAACACTGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: STELSPCSYNNV*SNGTLSNTGKG
Trigger: CCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp GAACGAATGCTAGATTCAACTATCTCAACTAAGCAGGAAGTGGGTTCTTCTGCTCATGGCCATGTAAAATaGGTGGCTGGGCTTAGAGTT +
Preference number: 4 (lower is better)
Translates to: ERMLDSTISTKQEVGSSAHGHVK*VAGLRV
Trigger: AACTCTAAGCCCAGCCACTCATTTTACATGGCCATG...AGCAGAAGAACCCACTTCCTGCTTAGTTGAGATAGTTGAATCTAGCATTCGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp AAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCAACTTCTCCACTATACAATaGCTCTTTCACCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KGRHNGPLSFIGTNARFNFSTIQ*LFHPCH
Trigger: ATGGCAAGGGTGAAAGAGTCATTGTATAGTGGAGAA...GTTGAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665949.1
CDS-3UTR TCA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGCGCTCCTGCTCCTGTTaGAAGATGACAACTCTACCA +
Preference number: 4 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMRSCSC*KMTTLP
Trigger: TGGTAGAGTTGTCATCTTTCAACAGGAGCAGGAGCG...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp ATCAATGTTGATACAGTCCAATCTAGTCCATTAGGCAAGATGGTGCAAGAAGTCCTTTCGCTTGCCACTTaGACAGACTTTGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: INVDTVQSSPLGKMVQEVLSLAT*TDFARL
Trigger: AAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAG...GACTTCTTGCACCATCTTGCCTAATGGACTAGATTGGACTGTATCAACATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp ACAAGACATAATATTTGTAGTAGAGGGAATCACGGTCGGCTCGTTGAATTCTTTCACACTGTCAAACACTaGAAAGGGGCGCCACAATGG +
Preference number: 4 (lower is better)
Translates to: TRHNICSRGNHGRLVEFFHTVKH*KGAPQW
Trigger: CCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTG...AAAGAATTCAACGAGCCGACCGTGATTCCCTCTACTACAAATATTATGTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGCCTCCTCCAGCTCCATaGAACATAGAACGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMPPPAP*NIERRE
Trigger: TTCTCTTCGTTCTATGTTTCATGGAGCTGGAGGAGG...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000315985.7
CDS-3UTR TCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGTTCTCCTGCTCCTGTTaGAAGATGACAACTCTACCA +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKFSCSC*KMTTLP
Trigger: TGGTAGAGTTGTCATCTTTCAACAGGAGCAGGAGAA...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518397.5
ENST00000520329.5
CDS-3UTR TCA 90 bp GGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCGTCATTTTCATACAGTaGACAGAGTTTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GKGRHNGPLSFIGTNARFVIFIQ*TEFTSE
Trigger: CTCAGAAGTAAACTCTGTTCACTGTATGAAAATGAC...GAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp GCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATGTCATTTTCATACAGTaGACAGAGTTTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: ALPLPKWLADMENTTVMNVIFIQ*TEFTSE
Trigger: CTCAGAAGTAAACTCTGTTCACTGTATGAAAATGAC...ATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp ATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATACAGATTTTTATTTaGGGCAGCTGTTGGAGTTCA +
Preference number: 4 (lower is better)
Translates to: ITMCCRMAHCQTLERGATIQIFI*GSCWSS
Trigger: TGAACTCCAACAGCTGCCTCAAATAAAAATCTGTAT...TGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR GCA 90 bp AGTGCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATTATATCTGCTTCTaGTACATCATCATCTACTGC +
Preference number: 4 (lower is better)
Translates to: SALPLPKWLADMENTTVMNYICF*YIIIYC
Trigger: GCAGTAGATGATGATGTAGCAGAAGCAGATATAATT...CATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTCATTATATTCTCCTCTaGTATGAGACTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFHYILL*YETGFC
Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATATAATG...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp CGTCATCACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCCTTTCGCTTGCCACTTaGACAGACTTTGCGAGGCTT +
Preference number: 4 (lower is better)
Translates to: RHHNGRHKKWSKSMLIQSLSLAT*TDFARL
Trigger: AAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAG...GGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTGATGACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp GAACGAATGCTAGATTCAACTATCTCAACTAAGCAGGAAGTGGGTTCTTCTGCTCATCTTTCTTTCGCTTaGCACTTGCACAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: ERMLDSTISTKQEVGSSAHLSFA*HLHRLC
Trigger: GCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATG...AGCAGAAGAACCCACTTCCTGCTTAGTTGAGATAGTTGAATCTAGCATTCGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp AAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCAACTGTGTTACAGCTGTTTaGATGAAATTCTGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: KGRHNGPLSFIGTNARFNCVTAV*MKFCCC
Trigger: ACAGCAGCAGAATTTCATCCAAACAGCTGTAACACA...GTTGAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGAGGTATTCATGCACCTaGTATGTTTCCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMRYSCT*YVSTGL
Trigger: CAGGCCTGTGGAAACATACCAGGTGCATGAATACCT...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGCTACCCTTACCTAAATaGCTAGCAGACATGGAGAAC +
Preference number: 4 (lower is better)
Translates to: HHSDESTELSPCSYNNVLLPLPK*LADMEN
Trigger: GTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAG...CAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGGCTCCTGTTGAAAGATaGCAACTCTACCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKAPVER*QLYHLY
Trigger: ATAAAGGTGGTAGAGTTGTCATCTTTCAACAGGAGC...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518397.5
ENST00000520329.5
CDS-3UTR TCA 90 bp AACACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTTCTCCTGCTCCTGTTaGAAGATGACAACTCTACCA +
Preference number: 4 (lower is better)
Translates to: NTTVMNPQSFLHVAITMCFSCSC*KMTTLP
Trigger: TGGTAGAGTTGTCATCTTTCAACAGGAGCAGGAGAA...ACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000315985.7
ENST00000380737.8
CDS-3UTR TCA 90 bp TTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCACTATACAATGACTTTCTCCTGCTCCTGTTaGAAGATGACAACTCTACCA +
Preference number: 4 (lower is better)
Translates to: LGHLVKTMFARLLHYTMTFSCSC*KMTTLP
Trigger: TGGTAGAGTTGTCATCTTTCAACAGGAGCAGGAGAA...AGTCATTGTATAGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR TCA 90 bp CACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTATTCTCCTCTGCTATaGGACTGGATTTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: HHSDESTELSPCSYNNVLYSPLL*DWILFS
Trigger: GGAGAACAAAATCCAGTCTCATAGCAGAGGAGAATA...CAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000315985.7
ENST00000380737.8
CDS-3UTR TCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGTATTCTCCTCTGCTATaGGACTGGATTTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKYSPLL*DWILFS
Trigger: GGAGAACAAAATCCAGTCTCATAGCAGAGGAGAATA...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518397.5
ENST00000520329.5
CDS-3UTR TCA 90 bp GAACGAATGCTAGATTCAACTATCTCAACTAAGCAGGAAGTGGGTTCTTCTGCTGCACTCAGAGTCCTCTaGAATTCAAGGTTGTTACAT +
Preference number: 4 (lower is better)
Translates to: ERMLDSTISTKQEVGSSAALRVL*NSRLLH
Trigger: ATGTAACAACCTTGAATTTCAGAGGACTCTGAGTGC...AGCAGAAGAACCCACTTCCTGCTTAGTTGAGATAGTTGAATCTAGCATTCGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGTTCTCCACTATACAATaGCTCTTTCACCCTTGCCAT +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKFSTIQ*LFHPCH
Trigger: ATGGCAAGGGTGAAAGAGTCATTGTATAGTGGAGAA...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR GCA 90 bp ATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACACATTATATTCTCCTCTaGTATGAGACTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: ITMCCRMAHCQTLERGATHYILL*YETGFC
Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATATAATG...TGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp GAACGAATGCTAGATTCAACTATCTCAACTAAGCAGGAAGTGGGTTCTTCTGCTCTTCTGAGGTATTCATaGACCTGGTATGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: ERMLDSTISTKQEVGSSALLRYS*TWYVST
Trigger: TGTGGAAACATACCAGGTGCATGAATACCTCAGAAG...AGCAGAAGAACCCACTTCCTGCTTAGTTGAGATAGTTGAATCTAGCATTCGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp AACACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTCATCTTTCTTTCGCTTaGCACTTGCACAGACTTTGC +
Preference number: 4 (lower is better)
Translates to: NTTVMNPQSFLHVAITMCHLSFA*HLHRLC
Trigger: GCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATG...ACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CGTCATCACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCAGGTATTCATGCACCTaGTATGTTTCCACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RHHNGRHKKWSKSMLIQSRYSCT*YVSTGL
Trigger: CAGGCCTGTGGAAACATACCAGGTGCATGAATACCT...GGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTGATGACG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp AGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACACAATGTGTTGTCGAATaGCACACTGTCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: SFLHVAITMCCRMAHCQTQCVVE*HTVKHW
Trigger: CCAGTGTTTGACAGTGTGCCATTCGACAACACATTG...TGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGCTACATGGAGAAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CTGGTGGCGTTAACTTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCTTAACTTGGGTCATTTaGTTAAGACAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: LVALTWVIWLRQCLPGFSLTWVI*LRQCLP
Trigger: TGGCAAACATTGTCTTAACCAAATGACCCAAGTTAA...GGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAAGTTAACGCCACCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR CCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGCTGGTGGCGTTAACTTaGGTCATTTGGTTAAGACAA +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKLVALT*VIWLRQ
Trigger: TTGTCTTAACCAAATGACCCAAGTTAACGCCACCAG...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR TCA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGGCTCCTGTTGAAAGATaGCAACTCTACCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMAPVER*QLYHLY
Trigger: ATAAAGGTGGTAGAGTTGTCATCTTTCAACAGGAGC...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp TTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCACTATACAATGACTGCTCCTGTTGAAAGATaGCAACTCTACCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: LGHLVKTMFARLLHYTMTAPVER*QLYHLY
Trigger: ATAAAGGTGGTAGAGTTGTCATCTTTCAACAGGAGC...AGTCATTGTATAGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR TCA 90 bp TTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCACTATACAATGACTTATTCTCCTCTGCTATaGGACTGGATTTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LGHLVKTMFARLLHYTMTYSPLL*DWILFS
Trigger: GGAGAACAAAATCCAGTCTCATAGCAGAGGAGAATA...AGTCATTGTATAGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR TCA 90 bp CACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTATTCTCCTCTGCTATaGGACTGGATTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: HHSDESTELSPCSYNNVLYSPLL*DWILFS
Trigger: TGAGAACAAAATCCAGTCTCATAGCAGAGGAGAATA...CAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGGGGAACATTACTGCCTaGGTAAGGAGTAATGATTCA +
Preference number: 4 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMGNITA*VRSNDS
Trigger: TGAATCATTACTCCTTACCCAGGCAGTAATGTTCCC...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000315985.7
CDS-3UTR CCA 90 bp GAACGAATGCTAGATTCAACTATCTCAACTAAGCAGGAAGTGGGTTCTTCTGCTTTTCTGAGAGCTGTTTaGTGGTGTTATCTCAAGACA +
Preference number: 4 (lower is better)
Translates to: ERMLDSTISTKQEVGSSAFLRAV*WCYLKT
Trigger: TGTCTTGAGATAACACCACCAAACAGCTCTCAGAAA...AGCAGAAGAACCCACTTCCTGCTTAGTTGAGATAGTTGAATCTAGCATTCGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CCA 90 bp ATCAATGTTGATACAGTCCAATCTAGTCCATTAGGCAAGATGGTGCAAGAAGTCCTGGTGGCGTTAACTTaGGTCATTTGGTTAAGACAA +
Preference number: 4 (lower is better)
Translates to: INVDTVQSSPLGKMVQEVLVALT*VIWLRQ
Trigger: TTGTCTTAACCAAATGACCCAAGTTAACGCCACCAG...GACTTCTTGCACCATCTTGCCTAATGGACTAGATTGGACTGTATCAACATTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665949.1
CDS-3UTR TCA 90 bp CGTCATCACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCCTGTGCCCAAAGGTATaGCACAAAATATTGGCTACA +
Preference number: 4 (lower is better)
Translates to: RHHNGRHKKWSKSMLIQSLCPKV*HKILAT
Trigger: TGTAGCCAATATTTTGTGTCATACCTTTGGGCACAG...GGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTGATGACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp ATCAATGTTGATACAGTCCAATCTAGTCCATTAGGCAAGATGGTGCAAGAAGTCAAGTTTCTGCAAGACTaGCAAAGGTACATTCTACCT +
Preference number: 4 (lower is better)
Translates to: INVDTVQSSPLGKMVQEVKFLQD*QRYILP
Trigger: AGGTAGAATGTACCTTTGTCAGTCTTGCAGAAACTT...GACTTCTTGCACCATCTTGCCTAATGGACTAGATTGGACTGTATCAACATTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp AACACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTATTCTCCTCTGCTATaGGACTGGATTTTGTTCTCA +
Preference number: 4 (lower is better)
Translates to: NTTVMNPQSFLHVAITMCYSPLL*DWILFS
Trigger: TGAGAACAAAATCCAGTCTCATAGCAGAGGAGAATA...ACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGGTTTGGATGAAATTCTaGTGCTGTAATCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMVWMKF*CCNHLC
Trigger: ACAGAGGTGATTACAGCAGCAGAATTTCATCCAAAC...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
3UTR CAA 72 bp TATTGTTTTATAGCTGGTGGCGTTAACTTGGGTCATTaGGTTAAGACAATGTTTGCCAGGCTTCTCCACTAT +
Preference number: 4 (lower is better)
Translates to: YCFIAGGVNLGH*VKTMFARLLHY
Trigger: ATAGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAAGTTAACGCCACCAGCTATAAAACAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR TCA 90 bp CCATTTTGTTTCACTGTGCCCAAAGGTATGACACAAAATATTGGCTACAAGAGGGTCATTTTCATACAGTaGACAGAGTTTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PFCFTVPKGMTQNIGYKRVIFIQ*TEFTSE
Trigger: CTCAGAAGTAAACTCTGTTCACTGTATGAAAATGAC...CCTCTTGTAGCCAATATTTTGTGTCATACCTTTGGGCACAGTGAAACAAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGGTCATTTTCATACAGTaGACAGAGTTTACTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMVIFIQ*TEFTSE
Trigger: CTCAGAAGTAAACTCTGTTCACTGTATGAAAATGAC...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp ACTCGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAATTATATCTGCTTCTaGTACATCATCATCTACTGC +
Preference number: 4 (lower is better)
Translates to: TRSVVTVVGSLYLPSSSFNYICF*YIIIYC
Trigger: GCAGTAGATGATGATGTAGCAGAAGCAGATATAATT...GAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACGAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR GCA 90 bp CGTAGTGTAGTAACTGTAGTAGGATCTCTATACCTTCCATCCTCCTCTTTCAAGCATTATATTCTCCTCTaGTATGAGACTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: RSVVTVVGSLYLPSSSFKHYILL*YETGFC
Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATATAATG...CTTGAAAGAGGAGGATGGAAGGTATAGAGATCCTACTACAGTTACTACACTACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000518397.5
ENST00000520329.5
CDS-3UTR CCA 90 bp CACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCAATCTACAACTAAGCAGGAAGTaGGTTCTTCTGCTAGGAATG +
Preference number: 4 (lower is better)
Translates to: HNGRHKKWSKSMLIQSNLQLSRK*VLLLGM
Trigger: CATTCCTAGCAGAAGAACCCACTTCCTGCTTAGTTG...TAGATTGGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCAATCTACAATGTGTTGTCGAATaGCACACTGTCAAACACTGG +
Preference number: 4 (lower is better)
Translates to: HNGRHKKWSKSMLIQSNLQCVVE*HTVKHW
Trigger: CCAGTGTTTGACAGTGTGCCATTCGACAACACATTG...TAGATTGGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp CCATTTTGTTTCACTGTGCCCAAAGGTATGACACAAAATATTGGCTACAAGAGGAGCACTCTTCATCTTTaGATAATGTATCACCGCTTA +
Preference number: 4 (lower is better)
Translates to: PFCFTVPKGMTQNIGYKRSTLHL*IMYHRL
Trigger: TAAGCGGTGATACATTATCCAAAGATGAAGAGTGCT...CCTCTTGTAGCCAATATTTTGTGTCATACCTTTGGGCACAGTGAAACAAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CCA 90 bp ATCAATGTTGATACAGTCCAATCTAGTCCATTAGGCAAGATGGTGCAAGAAGTCCAGTCTCAAAAATATTaGCATCTACAGTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: INVDTVQSSPLGKMVQEVQSQKY*HLQWGK
Trigger: TTTTCCCCACTGTAGATGCCAATATTTTTGAGACTG...GACTTCTTGCACCATCTTGCCTAATGGACTAGATTGGACTGTATCAACATTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000660435.1
CDS-3UTR TCA 90 bp AGCACTCTTCATCTTTGGATAATGTATCACCGCTTAGGGAAAATGTATTCATATGCTCCTGTTGAAAGATaGCAACTCTACCACCTTTAT +
Preference number: 4 (lower is better)
Translates to: STLHLWIMYHRLGKMYSYAPVER*QLYHLY
Trigger: ATAAAGGTGGTAGAGTTGTCATCTTTCAACAGGAGC...ATATGAATACATTTTCCCTAAGCGGTGATACATTATCCAAAGATGAAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp AGCACTCTTCATCTTTGGATAATGTATCACCGCTTAGGGAAAATGTATTCATATTATTCTCCTCTGCTATaGGACTGGATTTTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: STLHLWIMYHRLGKMYSYYSPLL*DWILFS
Trigger: GGAGAACAAAATCCAGTCTCATAGCAGAGGAGAATA...ATATGAATACATTTTCCCTAAGCGGTGATACATTATCCAAAGATGAAGAGTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR TCA 90 bp CACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCAATCTAAACAGAGTTTACTTCTaGGGTATTCATGCACCTGGT +
Preference number: 4 (lower is better)
Translates to: HNGRHKKWSKSMLIQSNLNRVYF*GIHAPG
Trigger: ACCAGGTGCATGAATACCTCAGAAGTAAACTCTGTT...TAGATTGGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR TCA 90 bp CACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCAATCTATCTGTTCTTTGGAAGTaGGTCACTAAATCCAGCCAT +
Preference number: 4 (lower is better)
Translates to: HNGRHKKWSKSMLIQSNLSVLWK*VTKSSH
Trigger: ATGGCTGGATTTAGTGACTCACTTCCAAAGAACAGA...TAGATTGGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000665949.1
CDS-3UTR GCA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGAATTATATCTGCTTCTaGTACATCATCATCTACTGC +
Preference number: 4 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMNYICF*YIIIYC
Trigger: GCAGTAGATGATGATGTAGCAGAAGCAGATATAATT...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp AGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACACATTATATTCTCCTCTaGTATGAGACTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: SFLHVAITMCCRMAHCQTHYILL*YETGFC
Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATATAATG...TGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGCTACATGGAGAAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp TTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCACTATACAATGACTCATTATATTCTCCTCTaGTATGAGACTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: LGHLVKTMFARLLHYTMTHYILL*YETGFC
Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATATAATG...AGTCATTGTATAGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR GCA 90 bp AACACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTCATTATATTCTCCTCTaGTATGAGACTGGATTTTGT +
Preference number: 4 (lower is better)
Translates to: NTTVMNPQSFLHVAITMCHYILL*YETGFC
Trigger: ACAAAATCCAGTCTCATAGCAGAGGAGAATATAATG...ACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp CACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCAATCTACTTCTGAGGTATTCATaGACCTGGTATGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: HNGRHKKWSKSMLIQSNLLLRYS*TWYVST
Trigger: TGTGGAAACATACCAGGTGCATGAATACCTCAGAAG...TAGATTGGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CCA 90 bp ATCAATGTTGATACAGTCCAATCTAGTCCATTAGGCAAGATGGTGCAAGAAGTCTTAACTTGGGTCATTTaGTTAAGACAATGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: INVDTVQSSPLGKMVQEVLTWVI*LRQCLP
Trigger: TGGCAAACATTGTCTTAACCAAATGACCCAAGTTAA...GACTTCTTGCACCATCTTGCCTAATGGACTAGATTGGACTGTATCAACATTGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000665949.1
CDS-3UTR GCA 90 bp CGTCATCACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCAATTATATCTGCTTCTaGTACATCATCATCTACTGC +
Preference number: 4 (lower is better)
Translates to: RHHNGRHKKWSKSMLIQSNYICF*YIIIYC
Trigger: GCAGTAGATGATGATGTAGCAGAAGCAGATATAATT...GGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTGATGACG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR GCA 90 bp CACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCAATCTAGTTTGGATGAAATTCTaGTGCTGTAATCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: HNGRHKKWSKSMLIQSNLVWMKF*CCNHLC
Trigger: ACAGAGGTGATTACAGCAGCAGAATTTCATCCAAAC...TAGATTGGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS GCA 90 bp CCAGCCGGCAGGATGCTAGATTTCACTCTGGGGCTTCCCCGCTCGTaGTCTTTCTCCGGCAGCGGCGGCGGCGACTACGACAGCGACGGC +
Preference number: 5 (lower is better)
Translates to: PAGRMLDFTLGLPRS*SFSGSGGGDYDSDG
Trigger: GCCGTCGCTGTCGTAGTCGCCGCCGCCGCTGCCGGAGAAAGAGCACGAGCGGGGAAGCCCCAGAGTGAAATCTAGCATCCTGCCGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000380737.8
ENST00000518254.5
ENST00000520329.5
CDS GCA 90 bp TCAGCCGGCAGGATGCTAGATTTCACTCTGGGGCTTCCCCGCTCGTaGTCTTTCTCCGGCAGCGGCGGCGGCGACTACGACAGCGACGGC +
Preference number: 5 (lower is better)
Translates to: SAGRMLDFTLGLPRS*SFSGSGGGDYDSDG
Trigger: GCCGTCGCTGTCGTAGTCGCCGCCGCCGCTGCCGGAGAAAGAGCACGAGCGGGGAAGCCCCAGAGTGAAATCTAGCATCCTGCCGGCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524169.5
CDS GCA 90 bp TTTGACCCCTACCTCCCACCCCAAGACCACTGTTCCAGACAGCTTTaGTACCAATCAAGTCCATATTCAGCACTACCCAGCAATGGCCCC +
Preference number: 5 (lower is better)
Translates to: FDPYLPPQDHCSRQL*YQSSPYSALPSNGP
Trigger: GGGGCCATTGCTGGGTAGTGCTGAATATGGACTTGATTGGTAGCAAAGCTGTCTGGAACAGTGGTCTTGGGGTGGGAGGTAGGGGTCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666129.1
CDS TCA 90 bp CTGAGTTCCACATGGCTGGGAAGGCCTCAGAATCATGACGGGAGGTaGAAGTTACCTCTTACATGGCGGCGGCAAGAGAAAAATGAGGAA +
Preference number: 5 (lower is better)
Translates to: LSSTWLGRPQNHDGR*KLPLTWRRQEKNEE
Trigger: TTCCTCATTTTTCTCTTGCCGCCGCCATGTAAGAGGTAACTTTCACCTCCCGTCATGATTCTGAGGCCTTCCCAGCCATGTGGAACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000657943.1
CDS-3UTR CAA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTCCACTTGCACAGACTTaGCGAGGCTTCAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFPLAQT*RGFRTV
Trigger: CACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGG...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp GCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCGCGCTCCTGCTCCTGTaGAAAGATGACAACTCTACC +
Preference number: 5 (lower is better)
Translates to: AITMCCRMAHCQTLERGAALLLL*KDDNST
Trigger: GGTAGAGTTGTCATCTTTCAACAGGAGCAGGAGCGC...GGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000660435.1
ENST00000665949.1
CDS GCA 90 bp TCTTTCGCTTGCCACTTGCACAGACTTTGCGAGGCTTCAGAACTGTaGGAGGCTTATTGTTTTCCCGCGATGCTTCTAGGGTTATGTCTC +
Preference number: 5 (lower is better)
Translates to: SFACHLHRLCEASEL*EAYCFPAMLLGLCL
Trigger: GAGACATAACCCTAGAAGCATCGCGGGAAAACAATAAGCCTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS-3UTR CAA 90 bp ATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACACCACTTGCACAGACTTaGCGAGGCTTCAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: ITMCCRMAHCQTLERGATPLAQT*RGFRTV
Trigger: CACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGG...TGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp ATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACATCTTTCGCTTGCCACTaGCACAGACTTTGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: ITMCCRMAHCQTLERGATSFACH*HRLCEA
Trigger: AGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGA...TGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTGAAGAATATCACTGTTaGACACTTGTGGCAGGGGAA +
Preference number: 5 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPEEYHC*TLVAGE
Trigger: TTCCCCTGCCACAAGTGTCAAACAGTGATATTCTTC...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS TCA 90 bp GAAATTATATCTGAGTTCCACATGGCTGGGAAGGCCTCAGAATCATaGCGGGAGGTGAAAGTTACCTCTTACATGGCGGCGGCAAGAGAA +
Preference number: 5 (lower is better)
Translates to: EIISEFHMAGKASES*REVKVTSYMAAARE
Trigger: TTCTCTTGCCGCCGCCATGTAAGAGGTAACTTTCACCTCCCGTCATGATTCTGAGGCCTTCCCAGCCATGTGGAACTCAGATATAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657943.1
CDS-3UTR CAA 90 bp GTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTAGCTATAACAATGTGTaGTCGAATGGCACACTGTCA +
Preference number: 5 (lower is better)
Translates to: VLSNGTLSNTGKGRHNGPSYNNV*SNGTLS
Trigger: TGACAGTGTGCCATTCGACAACACATTGTTATAGCT...AGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp CTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGGCTGGTGGCGTTAACTaGGGTCATTTGGTTAAGACA +
Preference number: 5 (lower is better)
Translates to: LSNTGKGRHNGPLSFIGTAGGVN*GHLVKT
Trigger: TGTCTTAACCAAATGACCCAAGTTAACGCCACCAGC...CGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000665949.1
CDS-3UTR CAA 90 bp AAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCAACGCGCTCCTGCTCCTGTaGAAAGATGACAACTCTACC +
Preference number: 5 (lower is better)
Translates to: KGRHNGPLSFIGTNARFNALLLL*KDDNST
Trigger: GGTAGAGTTGTCATCTTTCAACAGGAGCAGGAGCGC...GTTGAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTTCATCTTTCTTTCGCTaGCCACTTGCACAGACTTTG +
Preference number: 5 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFSSFFR*PLAQTL
Trigger: CAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGA...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp ATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAAGGGGAATATCCCACTaGCAAGTCAAGCGTGAAGAA +
Preference number: 5 (lower is better)
Translates to: ITMCCRMAHCQTLERGATRGISH*QVKREE
Trigger: TTCTTCACGCTTGACTTGCAAGTGGGATATTCCCCT...TGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS GCA 90 bp CAACACTTATTTCATCTTTCTTTCGCTTGCCACTTGCACAGACTTTaGGAGGCTTCAGAACTGTGCGAGGCTTATTGTTTTCCCGCGATG +
Preference number: 5 (lower is better)
Translates to: QHLFHLSFACHLHRL*EASELCEAYCFPAM
Trigger: CATCGCGGGAAAACAATAAGCCTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAATAAGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS-3UTR CAA 90 bp GCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACACTGGAAAGGGGCGCCATGTGTTACAGCTGTTaGGATGAAATTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: AITMCCRMAHCQTLERGAMCYSC*DEILLL
Trigger: CAGCAGCAGAATTTCATCCAAACAGCTGTAACACAT...GGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp GAACGAATGCTAGATTCAACTATCTCAACTAAGCAGGAAGTGGGTTCTTCTGCTCCACTTGCACAGACTTaGCGAGGCTTCAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: ERMLDSTISTKQEVGSSAPLAQT*RGFRTV
Trigger: CACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGG...AGCAGAAGAACCCACTTCCTGCTTAGTTGAGATAGTTGAATCTAGCATTCGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp GAACGAATGCTAGATTCAACTATCTCAACTAAGCAGGAAGTGGGTTCTTCTGCTTCTTTCGCTTGCCACTaGCACAGACTTTGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: ERMLDSTISTKQEVGSSASFACH*HRLCEA
Trigger: AGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGA...AGCAGAAGAACCCACTTCCTGCTTAGTTGAGATAGTTGAATCTAGCATTCGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTAGCTATAACAATGTGTaGTCGAATGGCACACTGTCA +
Preference number: 5 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFSYNNV*SNGTLS
Trigger: TGACAGTGTGCCATTCGACAACACATTGTTATAGCT...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGCCACTTGCACAGACTTaGCGAGGCTTCAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMPLAQT*RGFRTV
Trigger: CACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGG...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp AACACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTCTTTCGCTTGCCACTaGCACAGACTTTGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: NTTVMNPQSFLHVAITMCSFACH*HRLCEA
Trigger: AGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGA...ACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp AGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGGCACACTGTCAAACATCTTTCGCTTGCCACTaGCACAGACTTTGCGAGGCT +
Preference number: 5 (lower is better)
Translates to: SFLHVAITMCCRMAHCQTSFACH*HRLCEA
Trigger: AGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGA...TGTTTGACAGTGTGCCATTCGACAACACATTGTTATAGCTACATGGAGAAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp GCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATCCAGTCTCAAAAATATaGGCATCTACAGTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: ALPLPKWLADMENTTVMNPVSKI*ASTVGK
Trigger: TTTCCCCACTGTAGATGCCAATATTTTTGAGACTGG...ATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000660435.1
CDS-3UTR CAA 90 bp ATCAATGTTGATACAGTCCAATCTAGTCCATTAGGCAAGATGGTGCAAGAAGTCACTGTGCGAGGCTTATaGTTTTCCCGCGATGCTTCT +
Preference number: 5 (lower is better)
Translates to: INVDTVQSSPLGKMVQEVTVRGL*FSRDAS
Trigger: AGAAGCATCGCGGGAAAACAATAAGCCTCGCACAGT...GACTTCTTGCACCATCTTGCCTAATGGACTAGATTGGACTGTATCAACATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp AGTGCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGTGGAGTAAATCAATGTaGATACAGTCCAATCTAGTC +
Preference number: 5 (lower is better)
Translates to: SALPLPKWLADMENTTVMWSKSM*IQSNLV
Trigger: GACTAGATTGGACTGTATCAACATTGATTTACTCCA...CATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp AATGGCACACTGTCAAACACTGGAAAGGGGCGCCACAATGGACCTCTCTCTTTTTATACAGATTTTTATTaGAGGCAGCTGTTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: NGTLSNTGKGRHNGPLSFYTDFY*RQLLEF
Trigger: GAACTCCAACAGCTGCCTCAAATAAAAATCTGTATA...AAAAGAGAGAGGTCCATTGTGGCGCCCCTTTCCAGTGTTTGACAGTGTGCCATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CAA 90 bp GCCCTACCCTTACCTAAATGGCTAGCAGACATGGAGAACACCACAGTGATGAATTGGAGTAAATCAATGTaGATACAGTCCAATCTAGTC +
Preference number: 5 (lower is better)
Translates to: ALPLPKWLADMENTTVMNWSKSM*IQSNLV
Trigger: GACTAGATTGGACTGTATCAACATTGATTTACTCCA...ATTCATCACTGTGGTGTTCTCCATGTCTGCTAGCCATTTAGGTAAGGGTAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp AAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCAACATCACGGTCGGCTCGTaGAATTCTTTTTCATTATTG +
Preference number: 5 (lower is better)
Translates to: KGRHNGPLSFIGTNARFNITVGS*NSFSLL
Trigger: CAATAATGAAAAAGAATTCAACGAGCCGACCGTGAT...GTTGAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CAA 90 bp TTGGGTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCACTATACAATGACTGCTGGTGGCGTTAACTaGGGTCATTTGGTTAAGACA +
Preference number: 5 (lower is better)
Translates to: LGHLVKTMFARLLHYTMTAGGVN*GHLVKT
Trigger: TGTCTTAACCAAATGACCCAAGTTAACGCCACCAGC...AGTCATTGTATAGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGACCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS-3UTR CAA 90 bp CACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGATGTGTTACAGCTGTTaGGATGAAATTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: HHSDESTELSPCSYNNVLMCYSC*DEILLL
Trigger: CAGCAGCAGAATTTCATCCAAACAGCTGTAACACAT...CAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp CCATTTTGTTTCACTGTGCCCAAAGGTATGACACAAAATATTGGCTACAAGAGGTCATCTTTCTTTCGCTaGCCACTTGCACAGACTTTG +
Preference number: 5 (lower is better)
Translates to: PFCFTVPKGMTQNIGYKRSSFFR*PLAQTL
Trigger: CAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGA...CCTCTTGTAGCCAATATTTTGTGTCATACCTTTGGGCACAGTGAAACAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CAA 90 bp AACACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTCATCTTTCTTTCGCTaGCCACTTGCACAGACTTTG +
Preference number: 5 (lower is better)
Translates to: NTTVMNPQSFLHVAITMCSSFFR*PLAQTL
Trigger: CAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGA...ACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp GAACGAATGCTAGATTCAACTATCTCAACTAAGCAGGAAGTGGGTTCTTCTGCTAGCTATAACAATGTGTaGTCGAATGGCACACTGTCA +
Preference number: 5 (lower is better)
Translates to: ERMLDSTISTKQEVGSSASYNNV*SNGTLS
Trigger: TGACAGTGTGCCATTCGACAACACATTGTTATAGCT...AGCAGAAGAACCCACTTCCTGCTTAGTTGAGATAGTTGAATCTAGCATTCGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp AAGGGGCGCCACAATGGACCTCTCTCTTTTATAGGAACGAATGCTAGATTCAACTGGAGTAAATCAATGTaGATACAGTCCAATCTAGTC +
Preference number: 5 (lower is better)
Translates to: KGRHNGPLSFIGTNARFNWSKSM*IQSNLV
Trigger: GACTAGATTGGACTGTATCAACATTGATTTACTCCA...GTTGAATCTAGCATTCGTTCCTATAAAAGAGAGAGGTCCATTGTGGCGCCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp CACCACAGTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGATTTCTGAGAGCTGTTaGGTGGTGTTATCTCAAGAC +
Preference number: 5 (lower is better)
Translates to: HHSDESTELSPCSYNNVLISESC*VVLSQD
Trigger: GTCTTGAGATAACACCACCAAACAGCTCTCAGAAAT...CAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCACTGTGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS TCA 90 bp ATTACCAAGGGTACAAGTGGCTCTGGACACACGGGTTTAAGACTTTaGACCTCTGTAATTGTACTTATCATGTCTGAGGCTTATTTCAGA +
Preference number: 5 (lower is better)
Translates to: ITKGTSGSGHTGLRL*TSVIVLIMSEAYFR
Trigger: TCTGAAATAAGCCTCAGACATGATAAGTACAATTACAGAGGTTCAAAGTCTTAAACCCGTGTGTCCAGAGCCACTTGTACCCTTGGTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS TCA 90 bp GTCATTTGGTTAAGACAATGTTTGCCAGGCTTCTCCACTATACAATaGCTCTTTCACCCTTGCCATATTCTGTTCTTTGGAAGTGAGTCA +
Preference number: 5 (lower is better)
Translates to: VIWLRQCLPGFSTIQ*LFHPCHILFFGSES
Trigger: TGACTCACTTCCAAAGAACAGAATATGGCAAGGGTGAAAGAGTCATTGTATAGTGGAGAAGCCTGGCAAACATTGTCTTAACCAAATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000518397.5
ENST00000665949.1
CDS-3UTR CAA 90 bp GTGATGAATCCACAGAGCTTTCTCCATGTAGCTATAACAATGTGTTGTCGAATGATGTGTTACAGCTGTTaGGATGAAATTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VMNPQSFLHVAITMCCRMMCYSC*DEILLL
Trigger: CAGCAGCAGAATTTCATCCAAACAGCTGTAACACAT...CATTCGACAACACATTGTTATAGCTACATGGAGAAAGCTCTGTGGATTCATCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp CCATTTTGTTTCACTGTGCCCAAAGGTATGACACAAAATATTGGCTACAAGAGGATGTGTTACAGCTGTTaGGATGAAATTCTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PFCFTVPKGMTQNIGYKRMCYSC*DEILLL
Trigger: CAGCAGCAGAATTTCATCCAAACAGCTGTAACACAT...CCTCTTGTAGCCAATATTTTGTGTCATACCTTTGGGCACAGTGAAACAAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS-3UTR CAA 90 bp CGTCATCACAATGGAAGGCATAAAAAGTGGAGTAAATCAATGTTGATACAGTCCTCATCTTTCTTTCGCTaGCCACTTGCACAGACTTTG +
Preference number: 5 (lower is better)
Translates to: RHHNGRHKKWSKSMLIQSSSFFR*PLAQTL
Trigger: CAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGA...GGACTGTATCAACATTGATTTACTCCACTTTTTATGCCTTCCATTGTGATGACG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp ATCAATGTTGATACAGTCCAATCTAGTCCATTAGGCAAGATGGTGCAAGAAGTCAGCTATAACAATGTGTaGTCGAATGGCACACTGTCA +
Preference number: 5 (lower is better)
Translates to: INVDTVQSSPLGKMVQEVSYNNV*SNGTLS
Trigger: TGACAGTGTGCCATTCGACAACACATTGTTATAGCT...GACTTCTTGCACCATCTTGCCTAATGGACTAGATTGGACTGTATCAACATTGAT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000660435.1
ENST00000665949.1
CDS-3UTR CAA 90 bp CCATTTTGTTTCACTGTGCCCAAAGGTATGACACAAAATATTGGCTACAAGAGGTATTTGAGGCAGCTGTaGGAGTTCATTAAGCACTTT +
Preference number: 5 (lower is better)
Translates to: PFCFTVPKGMTQNIGYKRYLRQL*EFIKHF
Trigger: AAAGTGCTTAATGAACTCCAACAGCTGCCTCAAATA...CCTCTTGTAGCCAATATTTTGTGTCATACCTTTGGGCACAGTGAAACAAAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS TCA 90 bp AGTGTACAAAAAGCCTGCAGAAGAGTTAATAAGGTTAAACTACCATaGAACATAGAACGAAGAGAAAACTTCGGGAACATTACTGCCTGG +
Preference number: 5 (lower is better)
Translates to: SVQKACRRVNKVKLP*NIERRENFGNITAW
Trigger: CCAGGCAGTAATGTTCCCGAAGTTTTCTCTTCGTTCTATGTTTCATGGTAGTTTAACCTTATTAACTCTTCTGCAGGCTTTTTGTACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000519636.5
ENST00000522482.5
ENST00000524099.5
CDS-3UTR CAA 90 bp CCATTTTGTTTCACTGTGCCCAAAGGTATGACACAAAATATTGGCTACAAGAGGTGGAGTAAATCAATGTaGATACAGTCCAATCTAGTC +
Preference number: 5 (lower is better)
Translates to: PFCFTVPKGMTQNIGYKRWSKSM*IQSNLV
Trigger: GACTAGATTGGACTGTATCAACATTGATTTACTCCA...CCTCTTGTAGCCAATATTTTGTGTCATACCTTTGGGCACAGTGAAACAAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380737.8
CDS CCA 72 bp CTGGACCCTACTCCCTCAAACCCGAGGGGCGCCCTGTaGCTCTGCGCGAGGCGCGGGCGGTCGCTAGGGGGT +
Preference number: 6 (lower is better)
Translates to: LDPTPSNPRGAL*LCARRGRSLGG
Trigger: ACCCCCTAGCGACCGCCCGCGCCTCGCGCAGAGCCACAGGGCGCCCCTCGGGTTTGAGGGAGTAGGGTCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522535.5
CDS GCA 72 bp CCTACTCCCTCAAACCCGAGGGGCGCCCTGTGGCTCTaGGCGAGGCGCGGGCGGTCGCTAGGGGGTGATGGA +
Preference number: 6 (lower is better)
Translates to: PTPSNPRGALWL*ARRGRSLGGDG
Trigger: TCCATCACCCCCTAGCGACCGCCCGCGCCTCGCGCAGAGCCACAGGGCGCCCCTCGGGTTTGAGGGAGTAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522535.5
CDS GCA 72 bp AGGATGCTAGATTTCACTCTGGGGCTTCCCCGCTCGTaGTCTTTCTCCGGCAGCGGCGGCGGCGACTACGAC +
Preference number: 6 (lower is better)
Translates to: RMLDFTLGLPRS*SFSGSGGGDYD
Trigger: GTCGTAGTCGCCGCCGCCGCTGCCGGAGAAAGAGCACGAGCGGGGAAGCCCCAGAGTGAAATCTAGCATCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000380737.8
ENST00000518254.5
ENST00000520329.5
ENST00000524169.5
CDS TCA 72 bp TCTGAGTTCCACATGGCTGGGAAGGCCTCAGAATCATaGCGGGAGGTGAAAGTTACCTCTTACATGGCGGCG +
Preference number: 6 (lower is better)
Translates to: SEFHMAGKASES*REVKVTSYMAA
Trigger: CGCCGCCATGTAAGAGGTAACTTTCACCTCCCGTCATGATTCTGAGGCCTTCCCAGCCATGTGGAACTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000657943.1
CDS GCA 72 bp TGCCACTTGCACAGACTTTGCGAGGCTTCAGAACTGTaGGAGGCTTATTGTTTTCCCGCGATGCTTCTAGGG +
Preference number: 6 (lower is better)
Translates to: CHLHRLCEASEL*EAYCFPAMLLG
Trigger: CCCTAGAAGCATCGCGGGAAAACAATAAGCCTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS TCA 72 bp CCAAGAGAGCTTCCAGGAATAACCTGGAATGCCTCATaGGGAGGTAGGCAGATTACCAAGGGTACAAGTGGC +
Preference number: 6 (lower is better)
Translates to: PRELPGITWNAS*GGRQITKGTSG
Trigger: GCCACTTGTACCCTTGGTAATCTGCCTACCTCCTCATGAGGCATTCCAGGTTATTCCTGGAAGCTCTCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS CAA 72 bp CAGACTTTGCGAGGCTTCAGAACTGTGCGAGGCTTATaGTTTTCCCGCGATGCTTCTAGGGTTATGTCTCGC +
Preference number: 6 (lower is better)
Translates to: QTLRGFRTVRGL*FSRDASRVMSR
Trigger: GCGAGACATAACCCTAGAAGCATCGCGGGAAAACAATAAGCCTCGCACAGTTCTGAAGCCTCGCAAAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS CAA 72 bp CTACCTCCCACCCCAAGACCACTGTTCCAGACAGCTTaGCTACCAATCAAGTCCATATTCAGCACTACCCAG +
Preference number: 6 (lower is better)
Translates to: LPPTPRPLFQTA*LPIKSIFSTTQ
Trigger: CTGGGTAGTGCTGAATATGGACTTGATTGGTAGCAAAGCTGTCTGGAACAGTGGTCTTGGGGTGGGAGGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666129.1
CDS CAA 90 bp CCACTTGCACAGACTTTGCGAGGCTTCAGAACTGTGCGAGGCTTATaGTTTTCCCGCGATGCTTCTAGGGTTATGTCTCGCTTTGTGTTT +
Preference number: 6 (lower is better)
Translates to: PLAQTLRGFRTVRGL*FSRDASRVMSRFVF
Trigger: AAACACAAAGCGAGACATAACCCTAGAAGCATCGCGGGAAAACAATAAGCCTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS CAA 90 bp GAACCAGACTCACCTGGGACTTCTGACTTCAGTGCACCAGGTTTATaGGTATTATTCCTGCAATATGCCTCACTGACTGCCTGTATCATC +
Preference number: 6 (lower is better)
Translates to: EPDSPGTSDFSAPGL*VLFLQYASLTACII
Trigger: GATGATACAGGCAGTCAGTGAGGCATATTGCAGGAATAATACCAATAAACCTGGTGCACTGAAGTCAGAAGTCCCAGGTGAGTCTGGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS GCA 72 bp GTCAACACTTATTTCATCTTTCTTTCGCTTGCCACTTaGACAGACTTTGCGAGGCTTCAGAACTGTGCGAGG +
Preference number: 6 (lower is better)
Translates to: VNTYFIFLSLAT*TDFARLQNCAR
Trigger: CCTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAATAAGTGTTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS CCA 72 bp TGCCCACACATACAACTACCACCAAGAGCACCAGTTTaGAAAGAGGTTAGTCCCCAATACTTGGTACTGCAT +
Preference number: 6 (lower is better)
Translates to: CPHIQLPPRAPV*KEVSPQYLVLH
Trigger: ATGCAGTACCAAGTATTGGGGACTAACCTCTTTCCAAACTGGTGCTCTTGGTGGTAGTTGTATGTGTGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521557.5
CDS CAA 72 bp TCACCTGGGACTTCTGACTTCAGTGCACCAGGTTTATaGGTATTATTCCTGCAATATGCCTCACTGACTGCC +
Preference number: 6 (lower is better)
Translates to: SPGTSDFSAPGL*VLFLQYASLTA
Trigger: GGCAGTCAGTGAGGCATATTGCAGGAATAATACCAATAAACCTGGTGCACTGAAGTCAGAAGTCCCAGGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS CAA 90 bp TCAACACTTATTTCATCTTTCTTTCGCTTGCCACTTGCACAGACTTaGCGAGGCTTCAGAACTGTGCGAGGCTTATTGTTTTCCCGCGAT +
Preference number: 6 (lower is better)
Translates to: STLISSFFRLPLAQT*RGFRTVRGLLFSRD
Trigger: ATCGCGGGAAAACAATAAGCCTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAATAAGTGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS CAA 72 bp TGTCAACACTTATTTCATCTTTCTTTCGCTTGCCACTaGCACAGACTTTGCGAGGCTTCAGAACTGTGCGAG +
Preference number: 6 (lower is better)
Translates to: CQHLFHLSFACH*HRLCEASELCE
Trigger: CTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAATAAGTGTTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS TCA 72 bp GGTACAAGTGGCTCTGGACACACGGGTTTAAGACTTTaGACCTCTGTAATTGTACTTATCATGTCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: GTSGSGHTGLRL*TSVIVLIMSEA
Trigger: AGCCTCAGACATGATAAGTACAATTACAGAGGTTCAAAGTCTTAAACCCGTGTGTCCAGAGCCACTTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS GCA 72 bp TTTCATCTTTCTTTCGCTTGCCACTTGCACAGACTTTaGGAGGCTTCAGAACTGTGCGAGGCTTATTGTTTT +
Preference number: 6 (lower is better)
Translates to: FHLSFACHLHRL*EASELCEAYCF
Trigger: AAAACAATAAGCCTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS CAA 72 bp ATTTCATCTTTCTTTCGCTTGCCACTTGCACAGACTTaGCGAGGCTTCAGAACTGTGCGAGGCTTATTGTTT +
Preference number: 6 (lower is better)
Translates to: ISSFFRLPLAQT*RGFRTVRGLLF
Trigger: AAACAATAAGCCTCGCACAGTTCTGAAGCCTCGCAAAGTCTGTGCAAGTGGCAAGCGAAAGAAAGATGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000315985.7
ENST00000380737.8
ENST00000517754.1
ENST00000518208.1
ENST00000518215.5
ENST00000518890.5
ENST00000524169.5
ENST00000657943.1
ENST00000660435.1
ENST00000665751.1
ENST00000665949.1
ENST00000666129.1
ENST00000667651.1
CDS TCA 72 bp CCCAACCGCAAGTTACCAAAGAACAACAGCATTCCATaGGAGATATATTCCTTGGCAATCAATAGACATGCC +
Preference number: 6 (lower is better)
Translates to: PNRKLPKNNSIP*EIYSLAINRHA
Trigger: GGCATGTCTATTGATTGCCAAGGAATATATCTCTCATGGAATGCTGTTGTTCTTTGGTAACTTGCGGTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS GCA 72 bp CAGTGCACCAGGTTTATTGGTATTATTCCTGCAATATaGCTCACTGACTGCCTGTATCATCACCATGAGAAA +
Preference number: 6 (lower is better)
Translates to: QCTRFIGIIPAI*LTDCLYHHHEK
Trigger: TTTCTCATGGTGATGATACAGGCAGTCAGTGAGGCATATTGCAGGAATAATACCAATAAACCTGGTGCACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS TCA 72 bp ACTCTTTCACCCTTGCCATATTCTGTTCTTTGGAAGTaGGTCACTAAATCCAGCCTGTACATTGGTAGACAA +
Preference number: 6 (lower is better)
Translates to: TLSPLPYSVLWK*VTKSSLYIGRQ
Trigger: TTGTCTACCAATGTACAGGCTGGATTTAGTGACTCACTTCCAAAGAACAGAATATGGCAAGGGTGAAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518397.5
CDS CCA 72 bp CAACACAAAAAGGGCAAGGTGTACAATATTCTGGCTTaGACAAAGCATTTCCTAAACAACCATTCACAAACT +
Preference number: 6 (lower is better)
Translates to: QHKKGKVYNILA*TKHFLNNHSQT
Trigger: AGTTTGTGAATGGTTGTTTAGGAAATGCTTTGTCCAAGCCAGAATATTGTACACCTTGCCCTTTTTGTGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS CAA 72 bp ACAACACAAAAAGGGCAAGGTGTACAATATTCTGGCTaGGACAAAGCATTTCCTAAACAACCATTCACAAAC +
Preference number: 6 (lower is better)
Translates to: TTQKGQGVQYSG*DKAFPKQPFTN
Trigger: GTTTGTGAATGGTTGTTTAGGAAATGCTTTGTCCAAGCCAGAATATTGTACACCTTGCCCTTTTTGTGTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517754.1
CDS TCA 72 bp AAAGCCTGCAGAAGAGTTAATAAGGTTAAACTACCATaGAACATAGAACGAAGAGAAAACTTCGGGAACATT +
Preference number: 6 (lower is better)
Translates to: KACRRVNKVKLP*NIERRENFGNI
Trigger: AATGTTCCCGAAGTTTTCTCTTCGTTCTATGTTTCATGGTAGTTTAACCTTATTAACTCTTCTGCAGGCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000519636.5
ENST00000522482.5
ENST00000524099.5