Pregenerated sensors for PPP2CB (Homo sapiens)
Ensembl gene IDs: ENSG00000104695Ensembl transcript IDs: ENST00000221138.9, ENST00000518564.1, ENST00000520334.5, ENST00000520500.1, ENST00000523023.1, ENST00000523804.1
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTTGGGAGAGGTGGAGGTTGCAGTaGGCCGAGATCACACCATTG | + |
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Preference number: 2 (lower is better) Translates to: EIMSQSSSSSSVIPAIWERWRLQ*AEITPL Trigger: CAATGGTGTGATCTCGGCTCACTGCAACCTCCACCT...CTCCCAAATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTTGGCCGAGATCACACCATTaGACTCCAGCAAAGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SEIMSQSSSSSSVIPAIWPRSHH*TPAKAG Trigger: ACCTGCCTTTGCTGGAGTGCAATGGTGTGATCTCGG...CCAAATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| 3UTR-3UTR CAA 90 bp | ACTGGAGCCCCACAGGTTGAGGTTGCAGTGAGCCATGATCTCACCTCTGTGCTCGAGAATCGGTTGAACTaGGGAGGTGGAGGTTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: TGAPQVEVAVSHDLTSVLENRLN*GGGGCS Trigger: ACTGCAACCTCCACCTCCCAAGTTCAACCGATTCTC...GAGCACAGAGGTGAGATCATGGCTCACTGCAACCTCAACCTGTGGGGCTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| 3UTR-3UTR CAA 90 bp | GAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTTGGGAGGCCGAGATCACACCATaGCACTCCAGCAAAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: EIMSQSSSSSSVIPAIWEAEITP*HSSKGR Trigger: CCTGCCTTTGCTGGAGTGCAATGGTGTGATCTCGGC...CTCCCAAATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| 3UTR-3UTR CAA 90 bp | GAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTTGGGAGAGGCAGGAGAATCGGTaGAACTTGGGAGGTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: EIMSQSSSSSSVIPAIWERQENR*NLGGGG Trigger: ACCTCCACCTCCCAAGTTCAACCGATTCTCCTGCCT...CTCCCAAATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| 3UTR GCA 72 bp | CTCCAGCTAATGGTTATTTTTGCTGGAGAGGGGCTTTaGTATACTCCTCATCCAATTTCAGAAACAGAAATC | + |
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Preference number: 3 (lower is better) Translates to: LQLMVIFAGEGL*YTPHPISETEI Trigger: GATTTCTGTTTCTGAAATTGGATGAGGAGTATAGCAAAGCCCCTCTCCAGCAAAAATAACCATTAGCTGGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520334.5 |
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| CDS-3UTR TCA 90 bp | ACTGGAGCCCCACAGGTTGAGGTTGCAGTGAGCCATGATCTCACCTCTGTGCTCAGCTACTCTGGAGACTaGGGTGGGAGGATCACTGGA | + |
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Preference number: 4 (lower is better) Translates to: TGAPQVEVAVSHDLTSVLSYSGD*GGRITG Trigger: TCCAGTGATCCTCCCACCTCAGTCTCCAGAGTAGCT...GAGCACAGAGGTGAGATCATGGCTCACTGCAACCTCAACCTGTGGGGCTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS-3UTR TCA 90 bp | CAGAGTGAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTGTGCGCCGTGTAACATaGGGCTCACCACGACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QSEIMSQSSSSSSVIPAIVRRVT*GSPRRG Trigger: GCCTCGTCGTGGTGAGCCTCATGTTACACGGCGCAC...AATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTCACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS-3UTR CCA 90 bp | GAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTTGGGAGCTCTGGAGACTGAGGTaGGAGGATCACTGGAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: EIMSQSSSSSSVIPAIWELWRLR*EDHWSP Trigger: GGGGCTCCAGTGATCCTCCCACCTCAGTCTCCAGAG...CTCCCAAATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS-3UTR GCA 90 bp | CAGAGTGAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTCCAGGCGTGATTGCCTaGACCTGTAGTCTCAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: QSEIMSQSSSSSSVIPAIPGVIA*TCSLSY Trigger: GTAGCTGAGACTACAGGTGCAGGCAATCACGCCTGG...AATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTCACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS-3UTR TCA 90 bp | AGTGAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTTGGAGGTTGAGGTTGCAGTaGGCCATGATCTCACCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SEIMSQSSSSSSVIPAIWRLRLQ*AMISPL Trigger: CAGAGGTGAGATCATGGCTCACTGCAACCTCAACCT...CCAAATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS-3UTR GCA 90 bp | CAGAGTGAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTCCGAGATCACACCATTaGACTCCAGCAAAGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: QSEIMSQSSSSSSVIPAIPRSHH*TPAKAG Trigger: ACCTGCCTTTGCTGGAGTGCAATGGTGTGATCTCGG...AATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTCACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS-3UTR TCA 90 bp | TGGAGAGGGGCTTTGCTATACTCCTCATCCAATTTCAGAAACAGAAATCTTCTAACCACATTCCGATCATaGCACCAATTGTATCCCTCC | + |
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Preference number: 4 (lower is better) Translates to: WRGALLYSSSNFRNRNLLTTFRS*HQLYPS Trigger: GGAGGGATACAATTGGTGTCATGATCGGAATGTGGT...TAGAAGATTTCTGTTTCTGAAATTGGATGAGGAGTATAGCAAAGCCCCTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520334.5 |
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| CDS-3UTR CCA 90 bp | CTCCAGCTAATGGTTATTTTTGCTGGAGAGGGGCTTTGCTATACTCCTCATCCAAATGGTTATTTTTGCTaGAGAGGGGCTTTGCTATAC | + |
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Preference number: 4 (lower is better) Translates to: LQLMVIFAGEGLCYTPHPNGYFC*RGALLY Trigger: GTATAGCAAAGCCCCTCTCCAGCAAAAATAACCATT...TGGATGAGGAGTATAGCAAAGCCCCTCTCCAGCAAAAATAACCATTAGCTGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000520334.5 |
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| CDS-3UTR GCA 90 bp | TTTTGCTGGAGAGGGGCTTTGCTATACTCCTCATCCAATTTCAGAAACAGAAATGCTAATGGTTATTTTTaGTGGAGAGGGGCTTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: FCWRGALLYSSSNFRNRNANGYF*WRGALL Trigger: TAGCAAAGCCCCTCTCCAGCAAAAATAACCATTAGC...ATTTCTGTTTCTGAAATTGGATGAGGAGTATAGCAAAGCCCCTCTCCAGCAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000520334.5 |
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| 3UTR CAA 72 bp | TCTCCAGCTAATGGTTATTTTTGCTGGAGAGGGGCTTaGCTATACTCCTCATCCAATTTCAGAAACAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: SPANGYFCWRGA*LYSSSNFRNRN Trigger: ATTTCTGTTTCTGAAATTGGATGAGGAGTATAGCAAAGCCCCTCTCCAGCAAAAATAACCATTAGCTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000520334.5 |
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| CDS GCA 90 bp | GGCGCGGGTCCTCGGCCTAGCTCTCGCCGGACGAAGGCCGCCCGCTaGCGCTTCAGGCCCGCCTCACGCCTACCGGCCTCTCCCGACTTG | + |
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Preference number: 5 (lower is better) Translates to: GAGPRPSSRRTKAAR*RFRPASRLPASPDL Trigger: CAAGTCGGGAGAGGCCGGTAGGCGTGAGGCGGGCCTGAAGCGGCAGCGGGCGGCCTTCGTCCGGCGAGAGCTAGGCCGAGGACCCGCGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221138.9 |
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| CDS-3UTR CAA 90 bp | ACTGGAGCCCCACAGGTTGAGGTTGCAGTGAGCCATGATCTCACCTCTGTGCTCAGGCAGGAGAATCGGTaGAACTTGGGAGGTGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: TGAPQVEVAVSHDLTSVLRQENR*NLGGGG Trigger: ACCTCCACCTCCCAAGTTCAACCGATTCTCCTGCCT...GAGCACAGAGGTGAGATCATGGCTCACTGCAACCTCAACCTGTGGGGCTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS-3UTR CAA 90 bp | AGTGAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTTGGGCCGAGATCACACCATaGCACTCCAGCAAAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SEIMSQSSSSSSVIPAIWAEITP*HSSKGR Trigger: CCTGCCTTTGCTGGAGTGCAATGGTGTGATCTCGGC...CCAAATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS-3UTR CAA 90 bp | TCTCCAGCTAATGGTTATTTTTGCTGGAGAGGGGCTTTGCTATACTCCTCATCCTGCTGGAGAGGGGCTTaGCTATACTCCTCATCCAAT | + |
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Preference number: 5 (lower is better) Translates to: SPANGYFCWRGALLYSSSCWRGA*LYSSSN Trigger: ATTGGATGAGGAGTATAGCAAAGCCCCTCTCCAGCA...GGATGAGGAGTATAGCAAAGCCCCTCTCCAGCAAAAATAACCATTAGCTGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000520334.5 |
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| CDS GCA 90 bp | CCCTTACCTGTAAACCATCAGGGAGTTGGGGTCTTAAGCATGAGCTaGCTGATTCTTCTTGCTTGGTGCAATGCAATAAATGCCTCACTT | + |
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Preference number: 5 (lower is better) Translates to: PLPVNHQGVGVLSMS*LILLAWCNAINASL Trigger: AAGTGAGGCATTTATTGCATTGCACCAAGCAAGAAGAATCAGGCAGCTCATGCTTAAGACCCCAACTCCCTGATGGTTTACAGGTAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520500.1 |
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| CDS-3UTR CAA 90 bp | GAGATCATGTCTCAATCATCATCATCATCGTCTGTAATCCCAGCTATTTGGGAGGAGAATCGGTTGAACTaGGGAGGTGGAGGTTGCAGT | + |
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Preference number: 5 (lower is better) Translates to: EIMSQSSSSSSVIPAIWEENRLN*GGGGCS Trigger: ACTGCAACCTCCACCTCCCAAGTTCAACCGATTCTC...CTCCCAAATAGCTGGGATTACAGACGATGATGATGATGATTGAGACATGATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523023.1 |
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| CDS GCA 90 bp | GGAGTTGGGGTCTTAAGCATGAGCTGCCTGATTCTTCTTGCTTGGTaGAATGCAATAAATGCCTCACTTTCACTACAAACCCCAATGTCA | + |
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Preference number: 5 (lower is better) Translates to: GVGVLSMSCLILLAW*NAINASLSLQTPMS Trigger: TGACATTGGGGTTTGTAGTGAAAGTGAGGCATTTATTGCATTGCACCAAGCAAGAAGAATCAGGCAGCTCATGCTTAAGACCCCAACTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520500.1 |
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| CDS-3UTR CAA 90 bp | GCTGGAGAGGGGCTTTGCTATACTCCTCATCCAATTTCAGAAACAGAAATCTTCATAACAGATCACACATaGGGCCCTCATGTGGAACTT | + |
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Preference number: 5 (lower is better) Translates to: AGEGLCYTPHPISETEIFITDHT*GPHVEL Trigger: AAGTTCCACATGAGGGCCCAATGTGTGATCTGTTAT...GAAGATTTCTGTTTCTGAAATTGGATGAGGAGTATAGCAAAGCCCCTCTCCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520334.5 |
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| CDS GCA 72 bp | CCTCGGCCTAGCTCTCGCCGGACGAAGGCCGCCCGCTaGCGCTTCAGGCCCGCCTCACGCCTACCGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: PRPSSRRTKAAR*RFRPASRLPAS Trigger: AGAGGCCGGTAGGCGTGAGGCGGGCCTGAAGCGGCAGCGGGCGGCCTTCGTCCGGCGAGAGCTAGGCCGAGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221138.9 |
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| CDS GCA 72 bp | GTGAACGCCTTGTCGTCCATGGCGGCCCGATCCCGATaGGGATCCCGAGCCCCAGCCCGGCCGCCGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VNALSSMAARSR*GSRAPARPPPS Trigger: GGAGGGCGGCGGCCGGGCTGGGGCTCGGGATCCGCATCGGGATCGGGCCGCCATGGACGACAAGGCGTTCAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221138.9 ENST00000518564.1 |
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| CDS CAA 90 bp | TCAGGGAGTTGGGGTCTTAAGCATGAGCTGCCTGATTCTTCTTGCTaGGTGCAATGCAATAAATGCCTCACTTTCACTACAAACCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: SGSWGLKHELPDSSC*VQCNKCLTFTTNPN Trigger: ATTGGGGTTTGTAGTGAAAGTGAGGCATTTATTGCATTGCACCAAGCAAGAAGAATCAGGCAGCTCATGCTTAAGACCCCAACTCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000520500.1 |
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| CDS GCA 72 bp | AGTTGGGGTCTTAAGCATGAGCTGCCTGATTCTTCTTaGTTGGTGCAATGCAATAAATGCCTCACTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: SWGLKHELPDSS*LVQCNKCLTFT Trigger: AGTGAAAGTGAGGCATTTATTGCATTGCACCAAGCAAGAAGAATCAGGCAGCTCATGCTTAAGACCCCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520500.1 |
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| CDS GCA 72 bp | GTAAACCATCAGGGAGTTGGGGTCTTAAGCATGAGCTaGCTGATTCTTCTTGCTTGGTGCAATGCAATAAAT | + |
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Preference number: 6 (lower is better) Translates to: VNHQGVGVLSMS*LILLAWCNAIN Trigger: ATTTATTGCATTGCACCAAGCAAGAAGAATCAGGCAGCTCATGCTTAAGACCCCAACTCCCTGATGGTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520500.1 |
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| CDS CCA 72 bp | GGGGTCTTAAGCATGAGCTGCCTGATTCTTCTTGCTTaGTGCAATGCAATAAATGCCTCACTTTCACTACAA | + |
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Preference number: 6 (lower is better) Translates to: GVLSMSCLILLA*CNAINASLSLQ Trigger: TTGTAGTGAAAGTGAGGCATTTATTGCATTGCACCAAGCAAGAAGAATCAGGCAGCTCATGCTTAAGACCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520500.1 |
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| CDS GCA 72 bp | CTGCCTGATTCTTCTTGCTTGGTGCAATGCAATAAATaGCTCACTTTCACTACAAACCCCAATGTCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: LPDSSCLVQCNK*LTFTTNPNVSV Trigger: AACACTGACATTGGGGTTTGTAGTGAAAGTGAGGCATTTATTGCATTGCACCAAGCAAGAAGAATCAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000520500.1 |
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| CDS GCA 72 bp | GTCTTAAGCATGAGCTGCCTGATTCTTCTTGCTTGGTaGAATGCAATAAATGCCTCACTTTCACTACAAACC | + |
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Preference number: 6 (lower is better) Translates to: VLSMSCLILLAW*NAINASLSLQT Trigger: GGTTTGTAGTGAAAGTGAGGCATTTATTGCATTGCACCAAGCAAGAAGAATCAGGCAGCTCATGCTTAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000520500.1 |
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| CDS TCA 72 bp | ATCTTTCTATGTCATGACTGCCAAAAATGCATACATTaGATCCCTAACTGCAAGGAAAACATCAGGCAAACC | + |
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Preference number: 6 (lower is better) Translates to: IFLCHDCQKCIH*IPNCKENIRQT Trigger: GGTTTGCCTGATGTTTTCCTTGCAGTTAGGGATTCAATGTATGCATTTTTGGCAGTCATGACATAGAAAGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000523804.1 |
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